Ec-28_000340.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000340.2
Unique NameEc-28_000340.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length118
Homology
BLAST of Ec-28_000340.2 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 2.800e-135
Identity = 251/409 (61.37%), Postives = 270/409 (66.01%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSV------------AFGTTAEPNQRSRTSGVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYAQVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQP**STRTTCLR*WTCPSRPRGRSSRAG---RTTA----RLGSSR----TARVDRGRCTTPSACSACSASTSARMRVCDDGQRR---HEPSDLEGQCVGEAGEGGAEGG*EAGVQGQPQEEYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRK 1274
            F KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSV            ++   A+ N   R +       A      E+   +      +VP+R        +VVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ     +            P G+   +G   RT      R G SR    T R+ R  C         SA     M   DD   R      S+  G+ V            +   +   ++ YEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRK
Sbjct:   35 FEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYD---TRATVPMR--------KVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVN------FSADARFVMTGSDDTNLRIWKANASEKLGKVVPREAR-------KQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRK 419          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA)

HSP 1 Score: 282 bits (721), Expect = 2.320e-86
Identity = 188/409 (45.97%), Postives = 226/409 (55.26%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAF--GTTAEPNQRSRTSGVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYAQVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQP**STRTTCLR*WTCPSRPRGRS-SRAG--RTT----ARLGSSR----TARVDRGRCTTPSACS--ACSASTSARMRVCDDGQRRHEPSDLEGQCVGEAGEGGAEGG*EAGVQGQPQEEYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKWTTASSTARPG 1307
            F KAREY RALQ+ KLDKMFAKP +GALDGH DGVFC+A+S +NLVQFLSGACDGE+R+WDLSRR+CVW+A  H GFVRG++VTPDG SFLSAGDDG+VK+W+L +ASDL E P PTA W GK G F++LDHHW DA FATA D+V       AEP    R  G     +    P              +      +     +V L+MRSN VAWNP+ P  F  A ED   YTFD+R L       +            P GR  + AG  RT     AR G SR    T R+ R  C   SA +    S S    +R+      +   S+  G  V                    +  Y  MP+VRRIAKHRHVPR V+ AA AE VQRDK +RK       A+ G
Sbjct:   35 FEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKMG-FRALDHHWGDATFATASDAVELWDAERAEPTHAFRW-GADAVNSVRFNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIW-----KARASERLGAIVPREAR-------RLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDG 429          
BLAST of Ec-28_000340.2 vs. uniprot
Match: W7TEM8_9STRA (Ddb1-and cul4-associated factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEM8_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.840e-71
Identity = 135/243 (55.56%), Postives = 159/243 (65.43%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDS-VAFGTTAEPNQ-RSRTSGVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGA-YAQVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            F KAREYTRALQ+ KLDK+FAKP +GALDGH DGVFCSA S+RNLVQFL+GACDGE+R+WDL+ R CVWRA  H GFVRGLSV P G +F S GD   VKQW L VA D  + P    TW+  S    S+DHHW +A FATA D+ V     A  N  +S + G    +     P  E          R+V L    +GA   + VL MRSNA+AWNPQEP+NF  A+ED NLYTFDLR L+Q
Sbjct:   35 FDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDK-TVKQWTLCVADDSRQEPAALNTWL-HSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPA-ERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQ 274          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.120e-65
Identity = 120/243 (49.38%), Postives = 158/243 (65.02%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS-GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYA--QVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            F + REYTRAL +VKLDK+FAKP VGALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + +A++  ++PEP  T+ GK   F  +DHHW++  FAT    V        +     S G  + T+    P  E          R+V L Y++  A +  ++V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++
Sbjct:   35 FERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPA-EASLLASTGSDRAVSL-YDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDR 273          
BLAST of Ec-28_000340.2 vs. uniprot
Match: W4G513_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G513_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.230e-65
Identity = 120/243 (49.38%), Postives = 155/243 (63.79%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS-GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYA--QVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            F + REYTRAL +VKLDK+FAKP VGALDGH D V C  +S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG SF S  +D  +KQW + +A++  + PE   T+ GK   F  +DHHWT++ FAT    V        +     S G  + T+    P  E          R+V L Y++  A +  ++V+ MR+NA+AWNP EP +F  ANED NLYTFD+RNL++
Sbjct:   35 FERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFGTSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTVAPDGNSFFSCSEDKTIKQWRMAIANE-DDAPEAIQTFHGKES-FMGIDHHWTNSTFATCSSVVQVWDHNRSDPIHNYSWGADSITSVKFNPA-EPSLLASTGSDRAVAL-YDTRLAQSMRKIVMDMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDR 273          
BLAST of Ec-28_000340.2 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE)

HSP 1 Score: 226 bits (575), Expect = 7.710e-65
Identity = 152/405 (37.53%), Postives = 214/405 (52.84%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS----GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYA--QVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQP**STRTTCLR*WTCPSRPRGRSSRAGRTTARLGSSRTARVDRGRCTTPSACSACSASTSARMRVCDDGQRRHEPSDL-----EGQCVGEAGEGGAEGG*EAGVQGQPQEEYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKWTTASSTARPG 1307
            F + REYTRAL +VKL++MFAKP +GALDGH DGV   A+S  +LV  +SGA DGE+R+WDL RR CVW   GH+GFVRGL+VTPDG++F S  +D  VKQW L V S+  + P   AT+  K   F  +DHHW+   FAT G  V      +P++ + T     G  +  +    P  E          R++ L Y+   A +  ++V++MRSNA+AWNP EPMNF  ANE+ NLYTFD+R +N+     +            P GR   AG         RT R+   R T            + RM+  D         D      + +   +  + G     +       ++ Y+H+ E+ RIAKHRHVP+ +KKAA A+R    ++++K     + A+ G
Sbjct:   35 FERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKEP-FLGIDHHWSQKMFATCGSKVQVW---DPSRSTPTHEFAWGADSINSVHFNPA-EASLLASTGSDRNITL-YDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSY------DRTIRIFNVRSTKSR-----EVYHTQRMQRADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEG 422          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A067CYZ9_SAPPC (Sof1 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYZ9_SAPPC)

HSP 1 Score: 221 bits (564), Expect = 3.780e-63
Identity = 119/243 (48.97%), Postives = 153/243 (62.96%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS-GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYA--QVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            F + REYTRAL + KLDK+FAKP + ALDGH D V C ASS ++LV F+SGACDGEIRLWDL RR CVW   GH GFVRGL+  PDG +F S  +D  +KQW+L +A    E PE   T+ GK   F  +DHHW+++ FAT    V        +     S G  + T+    P  E          R++ L Y++  A +  +VVL+MRSNA+AWNP+EP +F  ANED NLYTFD+RNL++
Sbjct:   35 FERPREYTRALNATKLDKIFAKPFIAALDGHCDSVSCFASSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTTAPDGNTFFSCSEDKTIKQWKLAIAIGDDEQPEALQTFHGKEP-FMGIDHHWSNSTFATCSSVVQVWDHQRSDPLHEFSWGADSITSVKFNPA-EPSLLASTGSDRAINL-YDTRVATSMRKVVLEMRSNALAWNPREPYHFTVANEDHNLYTFDMRNLDR 274          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.200e-62
Identity = 120/243 (49.38%), Postives = 158/243 (65.02%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS-GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYA--QVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            F + REYTRAL +VKLDK+FAKP VGALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + +A++  ++PEP  T+ GK   F  +DHHW++  FAT    V        +     S G  + T+    P  E          R+V L Y++  A +  ++V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++
Sbjct:  369 FERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPA-EASLLASTGSDRAVSL-YDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDR 607          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A7S3XVY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY0_HETAK)

HSP 1 Score: 218 bits (555), Expect = 2.100e-62
Identity = 117/228 (51.32%), Postives = 149/228 (65.35%), Query Frame = 3
Query:  180 MFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQ--RSRTSGVRTATTA*V*P-R*EMFA-CEHWLQPRSVPLRYESDGA--YAQVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ 845
            M AKP +GALDGH DGV+C+A+++ +LVQF SG+CDGEIR WDL+++  VW    H+GFVRGL+V P G +F S GDD +VKQW + VA +L E PEP  T++GKS  F S+DHHW D KF T G S       E  +   S   GV T   A   P   ++FA C +    RSV L Y++  A    +V+LQMR+N VAWNP EP  FV ANED NLYTFD+RN+ +
Sbjct:    1 MMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSVNAHRGFVRGLTVAPSGRTFYSCGDDAVVKQWSVEVAHNLQEQPEPLRTYVGKSV-FHSIDHHWRDPKFVTTGSSAVDIWDCERTEPVHSYKWGVETVGCARYNPAEADLFASCGN---DRSVAL-YDARAATPLRKVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMER 223          
BLAST of Ec-28_000340.2 vs. uniprot
Match: A0A8K1CH46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH46_PYTOL)

HSP 1 Score: 219 bits (557), Expect = 4.010e-62
Identity = 148/400 (37.00%), Postives = 198/400 (49.50%), Query Frame = 3
Query:  126 F*KAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVAFGTTAEPNQRSRTS----GVRTATTA*V*PR*EMFACEHWLQPRSVPLRYESDGAYAQVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQP**STRTTCLR*WTCPSRPRGRSSRAGR--TTARLGSSRTARVDRGRCTTPSACSACSASTSARMRVCDDGQRRHEPSDLEGQCVGEAGEGGAEGG*EAGVQGQPQEEYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKWTTASSTARPG 1307
            F + REYTRAL +VKLD++FAKP VGALDGH D V   A+S R+LV FLSGA DGEIR+WDL RR CVW + GH+G VRGL+V P+G  F S  +D  VKQW L V  D  E P+  +T+  K   F  +DHHW+   F T    V      +P++   T     G  + T     P  E                     +  +VVL MRSNA+AWNP EP NF  ANED NLYTFD+R LN+     +            P GR   +G    T R+ S  +A+  R                                     +   + G+       +       +E Y+H+ E+ RI+KHRHVP+ +KKAA+A+R   ++E++K     + A+PG
Sbjct:   35 FERPREYTRALNAVKLDRLFAKPFVGALDGHSDSVSSIATSNRSLVAFLSGAADGEIRVWDLPRRKCVWNSYGHKGSVRGLTVAPNGGIFYSCSEDKTVKQWSLEVNDDDEEIPQALSTFTSKEP-FLGIDHHWSKDLFVTCSSKVQVW---DPHRSDPTHEFSWGADSITAVKFNPAEESLLASCGSDRNITLYDIRMASSMRKVVLDMRSNALAWNPMEPFNFTVANEDHNLYTFDMRKLNRALMVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFSINSAK-SREVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESNKKLGKVTPRERRKLEYNESLKERYQHLREISRISKHRHVPKAIKKAADAKREVNEREKKKTANRRAHAKPG 429          
The following BLAST results are available for this feature:
BLAST of Ec-28_000340.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH9_ECTSI2.800e-13561.37Sof1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9W7_9STRA2.320e-8645.97WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
W7TEM8_9STRA4.840e-7155.56Ddb1-and cul4-associated factor n=1 Tax=Nannochlor... [more]
A0A024UAB8_9STRA2.120e-6549.38Sof1 domain-containing protein n=11 Tax=Aphanomyce... [more]
W4G513_9STRA2.230e-6549.38Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
M4C0L6_HYAAE7.710e-6537.53DDB1- and CUL4-associated factor 13 n=18 Tax=Peron... [more]
A0A067CYZ9_SAPPC3.780e-6348.97Sof1 domain-containing protein n=3 Tax=Saprolegnia... [more]
A0A418B2S4_9STRA1.200e-6249.38SAM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S3XVY0_HETAK2.100e-6251.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1CH46_PYTOL4.010e-6237.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:384187..389888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1529
Hectar predicted targeting categoryother localisation
Gene idEc-28_000340.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000340Ec-28_000340Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 384187..389892 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000340.2Ec-28_000340.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 385073..386332 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000340.2.1Ec-28_000340.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 384187..384322 +
Ec-28_000340.2.2Ec-28_000340.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 384997..385138 +
Ec-28_000340.2.3Ec-28_000340.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 385683..385867 +
Ec-28_000340.2.4Ec-28_000340.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 386230..386405 +
Ec-28_000340.2.5Ec-28_000340.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 386616..386709 +
Ec-28_000340.2.6Ec-28_000340.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 387202..387318 +
Ec-28_000340.2.7Ec-28_000340.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 387732..387925 +
Ec-28_000340.2.8Ec-28_000340.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 388600..388725 +
Ec-28_000340.2.9Ec-28_000340.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 389080..389191 +
Ec-28_000340.2.10Ec-28_000340.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 389642..389888 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003405UTR:Ec-28_000340.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 384187..384322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000340.2CDS:Ec-28_000340.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 385073..385138 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0003403UTR:Ec-28_000340.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 386333..386405 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000340.2 ID=Ec-28_000340.2|Name=Ec-28_000340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=118bp
MGMETACSAPPQAGEILCSSCQAPVTGRSDCGTCRGAAACGGRLDTRVSF
EVCRSPRTEPASCPRGTTGWSSSGSSAWHLISRRRRNPRRLGWASRAALS
PSTTTGRTRSSPRLETR*
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spliced messenger RNA

>Ec-28_000340.2 ID=Ec-28_000340.2|Name=Ec-28_000340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1529bp|location=Sequence derived from alignment at chr_28:384187..389888+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCGGACAAGAGGAAGAGGGATAACCATGAAGGTTAAAACTATTAGCCGCG
TGGAGGAGTCCTACACTCGTGACTGCAAGGGTGACCGGCTTCAAGTGCAC
CGAAACCGCGACCCCTCCCTGCATCCTTTTGAAAAGGCAAGAGAGTACAC
CCGAGCATTACAGTCAGTAAAGCTTGACAAGATGTTTGCGAAGCCTCTGG
TTGGGGCGTTGGATGGGCATGGAGACGGCGTGTTCTGCTCCGCCTCAAGC
AGGAGAAATCTTGTGCAGTTCTTGTCAGGCGCCTGTGACGGGGAGATCCG
ACTGTGGGACCTGTCGCGGCGCAGCTGCGTGTGGCGGGCGGTTGGACACC
AGGGTTTCGTTCGAGGTCTGTCGGTCACCCCGGACGGAGCCAGCTTCCTG
TCCGCGGGGGACGACGGGATGGTCAAGCAGTGGGAGCTCGGCGTGGCATC
TGATCTCTCGGAGACGCCGGAACCCACGGCGACTTGGATGGGCAAGTCGG
GCGGCTTTAAGTCCCTCGACCACCACTGGACGGACGCGAAGTTCGCCACG
GCTGGAGACTCGGTAGACCTTTGGGACCACAGCAGAGCCGAACCAACGCT
CTCGTACCAGTGGGGTGCGGACAGCAACAACTGCGTGAGGTTTAACCCCG
CTGAGAGATGTTTGCTTGCGAGCACTGGCTCCAGCCGAGAAGTGTGCCTC
TACGATACGAGAGCGACGGTGCCTATGCGCAAGGTTGTCTTGCAAATGCG
ATCAAACGCCGTGGCGTGGAACCCTCAGGAGCCAATGAATTTCGTTTGCG
CCAACGAGGACACCAATCTCTACACGTTCGACCTGCGGAACCTCAACCAG
GCCTTGATGATCCACAAGGACCACGTGTCTGCGGTGATGGACGTGTCCTT
CTCGCCCACGGGGCAGGAGTTCGCGAGCGGGTCGTACGACCGCACGGTTA
GGGTCTTCCCGCACCGCGCGGGTCGATCGCGGGAGGTGTACCACACCAAG
CGCATGCAGCGCGTGTTCTGCGTCAACTTCAGCGCGGATGCGAGGTTTGT
GATGACGGGCAGCGACGACACGAACCTTCGGATCTGGAAGGCCAATGCGT
CGGAGAAGCTGGGGAAGGTGGTGCCGAGGGAGGCTAGGAAGCAGGAGTAC
AGGGACAGCCTCAAGAAGAGGTACGAACACATGCCCGAAGTGCGGCGAAT
TGCGAAGCACCGACACGTGCCGAGAATCGTCAAGAAGGCGGCGGAGGCGG
AGCGCGTGCAGAGGGACAAGGAGCGCCGGAAGGTGGACAACCGCATCAAG
CACAGCAAGGCCGGGACGGTGGAGACGGTGCCAGAGAGAAAGAAGAAGAT
CGTCAAGGAGCTCACGTAAAGGCACGCTTTTCTAGTCTTGCGCCCGGTCG
TGCTCTTCTGAGGACGGGCGTTTCACGTGTGGCAATTACTGTTGCTGTGT
TGGTATTTGTTTTTGGCCGGTGGCCCCGAGAGCGCCTTTTGTGTCTCTGT
CGTCTGTTGTTAGGAGCTACCAGACATCT
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protein sequence of Ec-28_000340.2

>Ec-28_000340.2 ID=Ec-28_000340.2|Name=Ec-28_000340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=118bp
MGMETACSAPPQAGEILCSSCQAPVTGRSDCGTCRGAAACGGRLDTRVSF
EVCRSPRTEPASCPRGTTGWSSSGSSAWHLISRRRRNPRRLGWASRAALS
PSTTTGRTRSSPRLETR*
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mRNA from alignment at chr_28:384187..389888+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000340.2 ID=Ec-28_000340.2|Name=Ec-28_000340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5702bp|location=Sequence derived from alignment at chr_28:384187..389888+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCGGACAAGAGGAAGAGGGATAACCATGAAGGTTAAAACTATTAGCCGCG TGGAGGAGTCCTACACTCGTGACTGCAAGGGTGACCGGCTTCAAGTGCAC CGAAACCGCGACCCCTCCCTGCATCCTTTTGAAAAGGTATGGTTACCCCG CAACTTTGGTAGACCGGGTGGGGGTGCGTTGTGCGTTGGCTGTTGGCTGA TCAAGTCGGGACTAGCAAGTTCTTGCGTACAAGTATCATGTTTCCCGTTT GTGGCGGTTCCGTGGACCGATCTCTACGTTGATCGTACAGACTGCAAGGG CCGAGAGAGTTGTAAATCTTGTCAGCACGTCAGCACCACATGATTGCGCG AAAATTAGAGTGAAACGCGTTGACAGTCTCGCCTGTTTGGAGTCCTTTCC CCCATACCCGCCCAATCACAACCTAGACCTGTCCGCGCATCACAATTCTA CCCTATCCAACGCGACTCCAACCTATTTCCTTTGAAGTGAATCAAACACT CCCCAACAACGCCTTGCACCTTGGCACATGTTTCTGCCTACTACGCGAAC CCACGTAGAAGCAGCACCTAACCAAGGGTACACCTTACTGGCACGCGTGT AGGTTTGCAGGTTCAGGTTTTAGGTTAGATTCGAGGGGGTTATGGCCGAT TCACCTTGTGAGTATACGTGCTTTAGAAACACTGCTGTAATCCTGTGACG AGGACAATCGCGACGAGCAATAAACTTCCCATTCTGCTCATCCATCCGAT CTATGCCGTTGACTATTTCGCTGTTTCTCTTTCGCATCGTCAACGCCCTC TTTCTTCAAGGCAAGAGAGTACACCCGAGCATTACAGTCAGTAAAGCTTG ACAAGATGTTTGCGAAGCCTCTGGTTGGGGCGTTGGATGGGCATGGAGAC GGCGTGTTCTGCTCCGCCTCAAGCAGGAGAAATCTTGTGCAGTTCTTGTC AGGTGTGGTTGTGTGTGTGTGCCCCTGCAATCGCGCTTGGTGCATGCACA CGGCGAGACGTGTAGGTGTGAAGACGATTCTTGGACGGCATGCCGAAAGT CTAAATACGCTTTGTCTGAGCTGTGCTCCGGAGTCAGCCTACGACAACGG TTTCGATGGGCTTGGTGGGTGACAAGAGAGGCAAACCGCTACTCCAACCC GGCGCGGTAGATGTGGGCCCACAGCACCGTGGCCGTTTTATCCTTGATCG ATGTTTCCTGTGATGCGGGTTATACGAAATTGGAGACATCTGAAACGAGG GGCGTGCCGGTTTGGTGTTTGCCGGATGGCTTGGCATGCCCCCGCCCCGC CATTTGAATACAAAACGTCAATAACAGAACAGTTTGCTAGGACATATGCC ACGAGCCGCTGAGCTAGATATACACAGCACGAACGGCTGATGCTATCTTC GTGTTTCTGCTGCCGTGTGGGCAATGTGTCGGTGCCTCGCTCTGCGGTTT CATTTGTACGGCATCCAACACGATTGTCAATGTGTTGGTGGAGCAGGCGC CTGTGACGGGGAGATCCGACTGTGGGACCTGTCGCGGCGCAGCTGCGTGT GGCGGGCGGTTGGACACCAGGGTTTCGTTCGAGGTCTGTCGGTCACCCCG GACGGAGCCAGCTTCCTGTCCGCGGGGGACGACGGGATGGTCAAGCAGTG GGAGCTCGGCGTGGCATCTGATCTCTCGGAGGTCAGGAGGAAAATCAGTT TTGTTGACGCAGAAGTTGCTGCCTATGCTGTTGTTGTCATACAAGCGGTC GTATCGAAAAGAACCTGCGAGTGTTGCGTTTAAGGGAGGCCATCGTATGG CGGAGGTCTCCGTTTCTGTCGAGAGCAAGATGGCATATGTTCGTTGCTAC ACTGCTGCTGCGCGGTCGTTGCCTGAAGACGTGGCGAGGGAGAAAGGCGT GGTGATTCGTGGTGGTAGCGACAGCAAGTGTTCGCTGGTACAATATTACT GTACCTGTTTTTGTCCTTGTGTCAACAACGATGCGATGTTCACAATCGTA ATGCTTGTCAAACCATGCTGCAATGCCGCCCCTTGGCGTGCAGACGCCGG AACCCACGGCGACTTGGATGGGCAAGTCGGGCGGCTTTAAGTCCCTCGAC CACCACTGGACGGACGCGAAGTTCGCCACGGCTGGAGACTCGGTAGACCT TTGGGACCACAGCAGAGCCGAACCAACGCTCTCGTACCAGTGGGGTGCGG ACAGCAACAACTGCGTGAGGTGCGTCATCATTGGGACAAGCCCGTCTGTG CCCTCCTCCTATAGTGTCACGGCACCGCACAAGAGACGCAGGAGTGTGTA CTGTAGGCTACATCGTGCACGACTTGCCGCAGCAACCAGCATTTGACCGC GCTGTCGTCGACGTCGACCGTACGCTCGCCACGCGCCGTCCTCCGTCCGT CGCTGCCTTGTCGCCCTGGCCTGTCCCAGGTTTAACCCCGCTGAGAGATG TTTGCTTGCGAGCACTGGCTCCAGCCGAGAAGTGTGCCTCTACGATACGA GAGCGACGGTGCCTATGCGCAAGGTAATTGTCAGTGCGGGGCAAACACGC CGTCAGCAATATCTGTCGGTTGAATCCCACTCCCCCCCGCCGAGATTCCC AAAATAGCGGTACCGAGGTAAAAAGCGCTGCCCAGCTGTTACCTGACCAC GCGCTGGACGCTATTTTGCATGTCCAGCGAAATAACTCCTACCTGGTTCA CGTCTGCACTCATGTAGACGTCGATCACCCGCACTTGCACCCTTTTAAAG GTGTGTTATATATGTGCAGGTCTGTTTCATCTGACTGCTGTGTGCTGTGT ATTTGATTGTGCTTGAATTGTTCGGCAATGCTGTGTAGAGGGCGCGATAC CACCACCAGAGAGGATCTGACCCTGGTACTCTCGCGTATTTGTTTCAAAT CTGTCCTATACCTTGGCCTAACGCTTTGTTTCTCTCTTCTCTCTCTCTTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGCCCTCGCGGACACTTTGC TTCTTTGTGTGGAAGGTTGTCTTGCAAATGCGATCAAACGCCGTGGCGTG GAACCCTCAGGAGCCAATGAATTTCGTTTGCGCCAACGAGGACACCAATC TCTACACGTTCGACCTGCGGAACCTCAACCAGGTGAGTCACTACGGCTGC GCACCCTTCCCTGTGCAAGCAAGGGCATTCTGCATGTATGACTGACTAGT TGCTGTCAATGAGATAGCTACGAGACAAGGCGCGCAGGTTCATCCCCCTG GTGGTGGCCGCGAAGCTCTGTATGAAACACGCAGGTGTTCCTCACGTTGC TGTCAGCCTCTCCTTGAACCTCCATTGGCATTGCGCGTTCTCACGACCGA ACGAGCAGCATTGATACTCTCCAGACTGGCTCACTCGCACTCGAATCTAT TCTAAATGACAAATCTAAATGACAACCAACGGAATAGCTTTTCTTCGAAG CTCACGCGTCTGGCTCCACGCACAGATCCATAAGCAGGTTTGCACTGCCG CGCGTGGCCCCTTTACATCTCGCCCTCTCTGCCTCTCAACGCCAGGCCTT GATGATCCACAAGGACCACGTGTCTGCGGTGATGGACGTGTCCTTCTCGC CCACGGGGCAGGAGTTCGCGAGCGGGTCGTACGACCGCACGGTTAGGGTC TTCCCGCACCGCGCGGGTCGATCGCGGGAGGTGTACCACACCAAGCGCAT GCAGCGCGTGTTCTGCGTCAACTTCAGCGCGGATGCGAGGTATCTGCGTC AGCAGGGACTACTGCTGTGTTGTTGTGGAATCCGTTTCTTATGCAGCCCG TGGAAACCCCGGTTGATCCGGAGAAAGCTATTGAATGATGAGAGGGAGAA GGAGAGGGGTGATGCGCCCGTGAGGCGGCGGCACGCCGCAGAGATCCCGT AGATTACCTCCAGGAAATTGGTATTGTGCCGTCGAACACCCGCCACTGCA GAGCAGGGGGTGATGAGAGCGAGAACGAGCAGTTGACGGGTACCGTGGTA CTCTTTGCGGAGCCCCTCCTCCAAATTCAACAAGCCCCCGGCACGGTACA CTACAACGATGTTTATTTATTTGCCGAAAATGTTGATATCTTCCGAGGTT GAACCTGCCCTGCCACCGTTTAGGCGGGAGTTTCGTGGTACGTTCACGCC AAGGTTCTAGTATACCACGCAGGCGTGCTTGTTGTTTTGCCCCGCTCGCT TCTCGGATCGCCTCGTCGCCGCCGACTGTCGAGGCTTGCTTTGAGCGCGC ATTTTGGTTTGCCGGGTGTTGCGCCGCAAAGGCTCTCTCGGCTCGATTTT TTGCTGCTCCCCCCATCTTGGTGCTCGATGCTCCCATTGCTTGGTCGCGT ACCTTTTGTATAACACCGCACCTGCTACCGCTGCTGCTAAAACCCTTGCG GTGGATACGACAGGTTTGTGATGACGGGCAGCGACGACACGAACCTTCGG ATCTGGAAGGCCAATGCGTCGGAGAAGCTGGGGAAGGTGGTGCCGAGGGA GGCTAGGAAGCAGGAGTACAGGGACAGCCTCAAGAAGAGGTGAGCTCCGT CCTTGCTTGTCGTCCTTGCACGCGGCAGGGTTGGCCGTGCTCGTCTATAC TGGTGTCTCGTCTTTCGTACCGGTAGGAGGTTGCCGTTAACGGGTATTGT GAACACATTCCGTGCCCAGTCCGAGGACATGGCCGTGTGTATGGGTGGGG GGGAGCAGCTACCCAAGGCCCACCTCGTTTCCAGCGCACGGCACACTGTT TTTTGTGTGGCCTCCGCACATCTTGAAACCTATTCGTACCGTAGTGGCGC CGCCTGCGTCTTCGCAGCCATGATCCCATGGCCTAATTCTTGCCGCGCGC ACGGGCACGTATACAATTTCCCCCCCGCCACGATCGAGAGCAGGTACGAA CACATGCCCGAAGTGCGGCGAATTGCGAAGCACCGACACGTGCCGAGAAT CGTCAAGAAGGCGGCGGAGGCGGAGCGCGTGCAGAGGGACAAGGAGCGCC GGAAGGTGAGCGGCGGGTTCCGAACCTCATGAGACGTGACACTCGCGTGC ACAATTACATAGTAGTAGGCATACGCTTATGCACACCTCGTGGATCTTGC TCTTGAATAGGTTACTACTGTGGGCTGTTGGAAGCCATACATGGGGATTT TTTTAACGTCTGTTTTGCCGGTGTCCCTGCCTGGCCCTGTCGTGAAACGA GGGGGAGGGTAGGAGTCGGGCACTTCCGTTCTTAAAGACCTTTGCATCTT TCGCGAAGAGGAAGCTCGCCATTTGCCTTATCGGCCTCGGGAAAACAGGC ACAGAGGGGCGGAACGGCGGCTTTTAGTGTCAAGAAATCAATCCTGCCCG GTTTGTGCAATGCGTGCCTACTTTTCATGGACCAAGCTTCTTCAAAATAG CCGCCACATGGATTCGACTGAGTGGCGTCCCGGTTTTGCCTACTACTCCC GACAGGTGGACAACCGCATCAAGCACAGCAAGGCCGGGACGGTGGAGACG GTGCCAGAGAGAAAGAAGAAGATCGTCAAGGAGCTCACGTAAAGGCACGC TTTTCTAGTCTTGCGCCCGGTCGTGCTCTTCTGAGGACGGGCGTTTCACG TGTGGCAATTACTGTTGCTGTGTTGGTATTTGTTTTTGGCCGGTGGCCCC GAGAGCGCCTTTTGTGTCTCTGTCGTCTGTTGTTAGGAGCTACCAGACAT CT
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Coding sequence (CDS) from alignment at chr_28:384187..389888+

>Ec-28_000340.2 ID=Ec-28_000340.2|Name=Ec-28_000340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=354bp|location=Sequence derived from alignment at chr_28:384187..389888+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCATGGAGACGGCGTGTTCTGCTCCGCCTCAAGCAGGAGAAATCTT
GTGCAGTTCTTGTCAGGCGCCTGTGACGGGGAGATCCGACTGTGGGACCT
GTCGCGGCGCAGCTGCGTGTGGCGGGCGGTTGGACACCAGGGTTTCGTTC
GAGGTCTGTCGGTCACCCCGGACGGAGCCAGCTTCCTGTCCGCGGGGGAC
GACGGGATGGTCAAGCAGTGGGAGCTCGGCGTGGCATCTGATCTCTCGGA
GACGCCGGAACCCACGGCGACTTGGATGGGCAAGTCGGGCGGCTTTAAGT
CCCTCGACCACCACTGGACGGACGCGAAGTTCGCCACGGCTGGAGACTCG
GTAG
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Synonyms
The feature 'Ec-28_000340.2' has the following synonyms
Synonym
Esi0120_0062
Esi_0120_0062