Ec-28_000110.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000110.1
Unique NameEc-28_000110.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length559
Homology
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A6H5KT74_9PHAE (PaO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT74_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 5.810e-167
Identity = 264/296 (89.19%), Postives = 271/296 (91.55%), Query Frame = 1 
Query:  787 GGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFGSSKEMMSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAVSALLAAASXXXXXXXXXXXXXXXXXXXPPGVGGLVAALGSLCSLGLAAAANALEARFYTNFERHPSLG 1674
            G   K  A PT   I++EGPDAPSSTGFS IVKSRGFGS K+M STRYRM APGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDM LICAQEDHVARTGKTLSESFLPIKSSDV+VVELRKWLDRVGHGMPFFEGW+KSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVK+VKKGGLA+SALLAAAS     XXXXXXXXXXXX  P GVG LVAALGSLC LGLA AANALEARFYTNFERHPSLG
Sbjct:    7 GATKKTPAPPTSMKIIEEGPDAPSSTGFSCIVKSRGFGSRKKMTSTRYRMQAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMKLICAQEDHVARTGKTLSESFLPIKSSDVMVVELRKWLDRVGHGMPFFEGWQKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKQVKKGGLALSALLAAASVLLSRXXXXXXXXXXXXA-PRGVGSLVAALGSLCLLGLATAANALEARFYTNFERHPSLG 301
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A6H5KU00_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU00_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 1.690e-148
Identity = 216/230 (93.91%), Postives = 220/230 (95.65%), Query Frame = 1 
Query:    1 MKARDCLLGCLILSPHVLVVALHVSSFSPKIRHGRSAPSAAAMLGSQQQQ-HASRCGHIQATVQESPGEEAVAYGTDAAPNDAAQWPYDC---WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENK 678
            MKARD LLG LILSPHVLVVALH SSFSPKIRHGRSAPSAAA+LGSQQQQ HASRCGH+QATVQESPGEEAVAYGTDAAPND AQWPYD    WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITE+GNIECLYHGWQFEGSKG CVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPD+LDENK
Sbjct:    1 MKARDGLLGYLILSPHVLVVALHASSFSPKIRHGRSAPSAAAILGSQQQQQHASRCGHVQATVQESPGEEAVAYGTDAAPNDEAQWPYDWRKHWYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEEGNIECLYHGWQFEGSKGTCVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDHLDENK 230
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BLAST of Ec-28_000110.1 vs. uniprot
Match: D7FIF8_ECTSI (Rieske domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF8_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 1.580e-114
Identity = 161/171 (94.15%), Postives = 163/171 (95.32%), Query Frame = 1 
Query:  235 PNDAAQWPYDCWYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLL 747
            P   +  P   WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENL+
Sbjct:   19 PRPVSSRPVYSWYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLV 189
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A8J6CDC8_DIALT (Rieske domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDC8_DIALT)

HSP 1 Score: 334 bits (857), Expect = 9.040e-105
Identity = 217/509 (42.63%), Postives = 281/509 (55.21%), Query Frame = 1 
Query:  208 AVAYGTDAAPNDAAQWPYDC---WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFGSSKEMMS-TRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVART--GKTLSESFLPIKSSDVLVVELRKWLDRVGH----GMPFFEGWKK-SKEAADLNDHEDCRR-------PSHRAF-ESRYHRHVLICAETRRALATVKRVKKGGLAV--SALLAAASXXXXXXXXXXXXXXXXXXXPPGVGGLVAALGSLCSLGLAAAANALEARFYTNFERHPSL 1671
            AV   T AA   AA   YD    WYAV ++ ++ EG +P A + F   L L+RD SG L+ V+D CPHR AKLSEG++  +G +ECLYHGW FEG  G CV +PQL EGA  P  A +  Y + V EG+V+VW+   P       + P P++ D+LD +K    Y F  D+PY+ S+L ENLLDPAHIPVSHD+T GGG +ENA P + ++     D     G     ++   G+++        R  APGVI  R+ G   G   FGAALHC+PLG  RSRLLF+TY    P     +  LKP +LRHLNSCKILEQD  LI +QED +A +  G +    +LP++S+DV VV  RKWLD VG     GMP+  GW   + +A         R        P+HRA  E RY RHV  C  TR ALA V+ +K+   A+  +A LAAA+                    P  G L AA+G+  +LG A     LE  F+  FER   L
Sbjct:   49 AVGAATPAAAG-AAPAEYDWRAQWYAVCFEENLPEGAEPLAFAAFGYGLALWRDGSGTLRAVADRCPHRLAKLSEGRV-RNGALECLYHGWAFEGGSGKCVSIPQLEEGAAIPSRACVAPYAVTVREGIVFVWL--TPGETDLASLPPPPASEDDLDADKSFSVYSFQIDVPYEASFLVENLLDPAHIPVSHDRTPGGGKRENAQPLEMEVYDGSVDRTGFRGRYRNTRASSGGATRAPPGWIDVRFAAPGVIYQRNAG---GPIRFGAALHCMPLGASRSRLLFRTYFKGLPRAARLLLALKPLWLRHLNSCKILEQDAGLIASQEDALAASAHGASTGSQYLPLRSADVFVVAHRKWLDLVGASGAGGMPWAVGWDAPAADALHAASPLAARATLAPSLAPAHRAIAEDRYSRHVRHCRATRDALARVRALKRALFALGGAAALAAAALN------------------PAGGSLRAAVGAALALGCALGLRRLERLFFRPFERREQL 532
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A7S1ZT10_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZT10_9STRA)

HSP 1 Score: 316 bits (809), Expect = 4.590e-97
Identity = 187/441 (42.40%), Postives = 267/441 (60.54%), Query Frame = 1 
Query:  223 TDAAPNDAAQWPYDC---WYAVGYDRDIVEGPKPFA----VSIFDEPLMLYR-DTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSK-GACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLD-ENKPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQE--GPDAPSSTGFSSIVKSRGFGSSKEMMSTRYRMHAPGVIRVRSEGKKEGEPL-FGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHEDCRRPS--------HRA---FESRYHRHVLICAETRRALATVKRVKKGGLAVS 1473
            + ++ N +   PYD    WY+V +    V  P   A    VS+F EP++L+R + +G + C +D CPHRAA LSEG++  DG +EC YHGWQF+G K G C  +PQL + A  P+AA L++      EG+V+VWMG+     G  +      T D +  +++     +F  DLPYD SYL ENL+DPAHIP+SHD T GGG +ENA   +  + +   GPD  +    ++  + +G     + +  +Y+  APG+IR +   +    PL FGAALHC+PL  GRSRLLF+ Y    PP+   +  +KPKFL +LNSCKILEQD  LI  QEDH  R+ ++L + ++ + SSDV V   R+WLD+VGHGMP+F+G   +  ++++NDH     PS        HRA    E+RYHRHV+ C  TR+ALA ++ +KKG LA++
Sbjct:   90 SSSSDNKSQPLPYDWKKQWYSVTF-ASYVPNPSKSAEVTPVSVFGEPMVLWRSEDNGIVHCANDVCPHRAAALSEGRL-RDGKLECYYHGWQFDGEKDGECNFIPQLEKDAQIPKAACLKMRECRTVEGIVWVWMGDEAPAVGPPEQGDGIGTMDPMTGKHEDYIINDFQIDLPYDHSYLVENLIDPAHIPISHDATPGGGKRENAQAYEMIVDRNSIGPDGFTGRYRTASQREKG----DDFIEVQYQ--APGIIRQKGMPRGNDSPLRFGAALHCMPLTLGRSRLLFRAYFTGLPPLAKLLITMKPKFLGNLNSCKILEQDAGLITTQEDHFKRSKRSLRDDYILLSSSDVFVKSYRQWLDKVGHGMPWFQGL--ATRSSNVNDHLAEIPPSPPGLDPIHHRAGNYVETRYHRHVMHCPTTRKALARIQTLKKGMLALT 520
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A836C985_9STRA (Rieske domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C985_9STRA)

HSP 1 Score: 307 bits (786), Expect = 9.720e-94
Identity = 181/437 (41.42%), Postives = 239/437 (54.69%), Query Frame = 1 
Query:  268 WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACV-----------------------------KVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDE-NKPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVK---SRGFGSSKEMMSTRYRMHAPGVIRVRSE--GKKEGEP--LFGAALHCIPL------------------GKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQE----------------------------DHVARTGKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAA 1329
            WY +GY +D   G +   V                            A+LSEG + E+G + C YHGW+F G+ GA                               ++PQL EGA  PRAA LRVYP+A  EGVV+VWMG++PWGEGA+ I P+P+T D ++  +   FTY+   DLPYD SYL ENL+DPAHIP+SH  TEGGGN++NA P  FDI +   D+  + GF + +    S+G        +T  +  AP VIR+R+E  GKKEG+P  +FGAALHC+                    G+GRSR+LF TYA   PP+V  I+G+KP +LRHLNSCK+LEQD+ LIC+QE                            DH ARTG+TLS+++LPI +SD LVV+ R+WLD VG GMP+ EG+  +   A
Sbjct:   77 WYPLGYSKDFEGGKRARPV----------------------------ARLSEG-LVENGRLYCTYHGWEFSGATGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIPQLAEGAAIPRAAALRVYPVAEREGVVWVWMGDDPWGEGARLIKPVPTTQDGVEAVDDLAFTYQVAVDLPYDHSYLVENLIDPAHIPISHHNTEGGGNRDNAKPLNFDIDK---DSFGAAGFKAKITNLFSKG--------TTAIQFDAPCVIRLRTETPGKKEGQPGLVFGAALHCVAXXXXXXXXXXXXXXXXXXXGQGRSRILFMTYARRMPPLVKLIFGIKPLWLRHLNSCKVLEQDLGLICSQEXXXXXXXXXEFKRXXXXXXXXXXXXXXXDHFARTGETLSQAYLPIATSDALVVQYRRWLDAVGSGMPYHEGFLSNANVA 473
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A7S1VJZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJZ6_9STRA)

HSP 1 Score: 293 bits (750), Expect = 2.430e-89
Identity = 177/424 (41.75%), Postives = 243/424 (57.31%), Query Frame = 1 
Query:  268 WYAVGYDRDIVEGPKPFAVS---IFDEPLMLYRDT-SGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGS-KGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFGSSKEMMSTRYRMHAPGVIRVRSEGKKEGEPL-FGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHEDCRRPS-----HRA-----FESRYHRHVLICAETRRALATVKRVKKGGLAVSALLAAA 1491
            WYA+ Y   +    K   V+   +F EPL+L+R+  +G + C  D CPHR A LSEG++  +G + C YHGW+F G   GAC ++PQL EGAT P+ A L++  L   EG+V+VWM ++      KD  P     D   + K   TY+F  DLPYD S+L ENL DPAH+ +SHD T GGG +E A      I Q   D+ SS GF+       F  ++ +  +     APG++R + EGK     + F AALHC+PLG GRSRLLF+ +    P +  F+  LKP + RHLNSCK+LEQD+ LI  QED+ AR+ + L E +L ++SSD  V   R+WLD+VGHGMP+++G       A  +   +   P      HRA      E+RYHRHV+ C  TR AL  ++  K+   A + L A A
Sbjct:   26 WYALTYSSYVPNPSKSSEVTPAAVFGEPLVLWREEDNGEIFCALDVCPHRQAALSEGRL-RNGQLYCYYHGWEFSGKDSGACTRIPQLQEGATIPKRACLQMKTLREEEGIVWVWMDDST--PPTKDP-PATGILDKDGKQKGWNTYDFQIDLPYDHSFLVENLADPAHVDISHDSTPGGGKRERAKAYDMKIDQ---DSISSDGFTGK-----FRQNENLPYSDLVFEAPGIVRNKFEGKIGSSTVRFEAALHCMPLGLGRSRLLFRVFNKGLPKLALFLLNLKPLWSRHLNSCKVLEQDVGLITTQEDYFARSKRELKEDYLLLQSSDTYVGAYRQWLDKVGHGMPWYQGLLSHNGGAIRSVPSNTLPPGLEPGYHRASNEDVVETRYHRHVMNCPTTRNALRRIQLGKRISTAAAILAATA 437
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A813H4Z8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4Z8_POLGL)

HSP 1 Score: 292 bits (747), Expect = 5.250e-89
Identity = 202/503 (40.16%), Postives = 269/503 (53.48%), Query Frame = 1 
Query:  271 YAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYV-WMGENPWGEGAKDILPIPSTPDNLD---ENKPTFTYE-FVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSS--TGFSSIVKSRGFGSS--KEMMSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGKTLSES---------------------FLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHEDCRRPS---------HRAFES-RYHRHVLICAETRRALATVKRVKKGGLAVSALLAAASXXXXXXXXXXXXXXXXXXXPPGVGGLVAALGSLCSLGLAAAANALEARFYTNFER 1659
            YA+ +  D+ +G  P   S+F   L+L+RD  G L+CV D CPHRAAKLSEG++   GN+EC YHGW FEG++G+C K+PQL   AT P AA ++ + +AV EG+V+V  +G++   E A    P P +PD+LD     K  F    F  DLPYD+S+L ENL+DPAHIP+SHD T GGG +ENA   +  +     DA S   +GF+   ++   G+   K    T     APG++R RS+    G  +FG ALHC+PL  GRSRLLF+ Y    P +   +Y LKP++LR+LNSCK+LEQD+ LIC QEDH++    + +E                      +L + S D  V   R W DR   GMP+  GW  S  AAD+         +         HRA  + R+ RH   C  TR AL  VKR+        AL A A+    XXXXXXX                AALG++     +     LEA FYT F R
Sbjct:    9 YAITFLEDLPDGAAPLPFSVFGHSLVLWRDAGGTLRCVRDRCPHRAAKLSEGRVRA-GNLECSYHGWTFEGARGSCTKIPQLDLQATIPAAACVQPFEVAVREGIVFVNLLGKD---ETAPGPSPAPCSPDDLDIPRRGKAKFAMNNFQIDLPYDYSFLIENLIDPAHIPISHDATPGGGKRENAQALEMQV-----DASSVGVSGFTGRYRATRLGAKTGKPDPWTETAFEAPGIVRYRSQ---RGNIVFGGALHCVPLAPGRSRLLFRVYFSGLPWIAMLVYSLKPQWLRNLNSCKVLEQDVGLICTQEDHLSGADGSSAEGGSSKGVGXXXXXXXXGGLAGQYLTLASQDTFVKAYRVWQDRFRVGMPWAVGW--SSPAADVAAASPLAASASLGPGLDGAHRALRANRFERHGQHCRATRNALQGVKRL--------ALAAQAAGMVAXXXXXXXKAARP-----------AALGAVFCFAASFGLRKLEAEFYTGFRR 478
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A7S2XLJ2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLJ2_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.340e-88
Identity = 180/451 (39.91%), Postives = 249/451 (55.21%), Query Frame = 1 
Query:  241 DAAQWPYDC---WYAVGYDRDIV---EGPKPFAVSIFDEPLMLYRDTSG---ALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSK-------------------GACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDEN----KPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFGSSKEMMSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVART-GKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKS--------------KEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVK 1452
            D +  PYD    WYA+ +   +    E  +    ++F  PL+L+R  +G    + C  D CPHRAA LSEG++  DG +ECLYHGWQ++G+                    GACV++PQL  GA  P+ + LR+    V EG+V+ WMG+   G   ++    P + + LD++    K     +F  DLPYD SYL ENL+DPAH+P+SHD+T GGG +ENA P +  + ++  + P   GF+   ++ G   ++       +  APG+IR   +  K G+  FGAALHC+PL  G+SRLLF+ Y    P     +   KPK+LR+LNSCK+LEQD+ LI  QEDH AR  G+ L + FL + SSD  V   R+WLDRVGHGMP+F+G   +              KE A   D    R  +    E+RYHRHV  C  TR AL  V R+K
Sbjct:   94 DDSSLPYDWKDQWYALTFADHLPKLSESAETVPAAVFGHPLVLWRGGAGDIGTIFCADDVCPHRAAALSEGRV-RDGRLECLYHGWQYQGAADPASKKQNDDPDQDSNQKDGACVRIPQLAVGADIPKRSCLRMRETRVVEGIVWTWMGD---GRSTREP---PRSKEGLDDSTGQLKGWVVNDFQIDLPYDHSYLAENLIDPAHVPISHDRTPGGGKRENAQPYEMILDKDSVNNPQ--GFTGRFRNAG-PDAQNATWFELQYEAPGIIR---QSAKNGKFQFGAALHCMPLSLGKSRLLFRAYFTGLPWFARIMIESKPKWLRNLNSCKVLEQDVGLIATQEDHFARNKGRMLKDDFLLLASSDKFVGAYRQWLDRVGHGMPWFQGLASTSSTQGNNPLHHLNGKELAPGLDGAHHRASNEAVMETRYHRHVQKCPSTRNALKHVIRIK 531
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BLAST of Ec-28_000110.1 vs. uniprot
Match: A0A7S1TYS4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS4_9STRA)

HSP 1 Score: 284 bits (726), Expect = 5.140e-86
Identity = 179/458 (39.08%), Postives = 254/458 (55.46%), Query Frame = 1 
Query:  223 TDAAPNDAAQWP------------YDC---WYAVGYDRDIVEG--PKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNIECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGAKDILPIPSTPDNLDEN----KPTFTYEFVCDLPYDWSYLTENLLDPAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFGSSKEMMS------------TRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLFKTYAMNFPPMVGFIYGL--------KPKFLRHLNSCKILEQDMNLICAQEDHVA-RTGKTLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHEDCRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAV 1470
            T   PN AA+ P            YD    WYAVG+++D+ +   P+P   S+F EP ++Y D  G L  + D CPHRAAKLS G + ++G +EC YHGW F+ SKG C  +PQL EGA  P+AA +    L ++EG+VY+W G       A    P P + DNL++     K    Y F  DLPY +  L ENL DPAHIPVSHD+T GGG +ENA P + +++   P    S   ++  K++   +SK+  +            T  ++ APG++R R E    G   FG+ALHC+P    RSRLLF+TY      + G ++          KP +LRHLNSCKILEQD+ LI +QED +A + G+  ++  L +KSSD +++ +R+WLD VG  +P ++GW    + +          P  R  ESRY RHV +   TR AL  +K +++  LA+
Sbjct:   21 TTGMPNAAARMPQCAVQPGEFADRYDWKKQWYAVGFEKDMPKAGSPQPQPFSVFGEPYVVYSDGEGELVALEDRCPHRAAKLSHGSV-KNGLLECNYHGWAFD-SKGECKDIPQLSEGAVIPKAACVPQKTLKISEGIVYLWPGSP---LEALASAP-PQSKDNLNDEESLKKMIDVYSFTIDLPYSYELLLENLSDPAHIPVSHDRTPGGGKRENAQPLEMEVLDITPTGVESRFRNTRPKAK---TSKKQETEDEAKDENTNAWTEIKIDAPGIVRYRFE--LPGGAAFGSALHCVPSSPYRSRLLFRTYFKGGGGVKGLLFKALFKSKTWYKPMWLRHLNSCKILEQDLGLITSQEDIMASKPGQIWADEALTLKSSDAVLIAVRQWLDGVGPALPHYQGWNSRADPSLPAP------PPDRYMESRYTRHVKVQRSTRNALRRIKWLRQASLAL 461
The following BLAST results are available for this feature:
BLAST of Ec-28_000110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT74_9PHAE5.810e-16789.19PaO domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KU00_9PHAE1.690e-14893.91Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FIF8_ECTSI1.580e-11494.15Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A8J6CDC8_DIALT9.040e-10542.63Rieske domain-containing protein n=1 Tax=Diacronem... [more]
A0A7S1ZT10_9STRA4.590e-9742.40Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A836C985_9STRA9.720e-9441.42Rieske domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S1VJZ6_9STRA2.430e-8941.75Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A813H4Z8_POLGL5.250e-8940.16Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2XLJ2_9STRA1.340e-8839.91Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1TYS4_9STRA5.140e-8639.08Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:128098..139480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.4
Seed ortholog evalue3.8e-94
Seed eggNOG ortholog2880.D7FIF8
Length1677
Hectar predicted targeting categorysignal peptide
Gene idEc-28_000110.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0015031,GO:0015833,GO:0031967,GO:0031975,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045036,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072594,GO:0072596,GO:0072598
EggNOG free text desc.chlorophyllide a oxygenase [overall] activity
EggNOG OGs2QT2X@2759,COG4638@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000110Ec-28_000110Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 125789..139656 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000110.1Ec-28_000110.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 128098..139480 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000110.1.11Ec-28_000110.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 128098..128454 -
Ec-28_000110.1.10Ec-28_000110.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 129267..129449 -
Ec-28_000110.1.9Ec-28_000110.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 130258..130341 -
Ec-28_000110.1.8Ec-28_000110.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 130747..130971 -
Ec-28_000110.1.7Ec-28_000110.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 132661..132748 -
Ec-28_000110.1.6Ec-28_000110.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 133623..133684 -
Ec-28_000110.1.5Ec-28_000110.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 134467..134631 -
Ec-28_000110.1.4Ec-28_000110.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 135047..135130 -
Ec-28_000110.1.3Ec-28_000110.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 136123..136285 -
Ec-28_000110.1.2Ec-28_000110.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 138324..138455 -
Ec-28_000110.1.1Ec-28_000110.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 139347..139480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000110.1CDS:Ec-28_000110.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 128098..128454 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000110.1 ID=Ec-28_000110.1|Name=Ec-28_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=559bp
MKARDCLLGCLILSPHVLVVALHVSSFSPKIRHGRSAPSAAAMLGSQQQQ
HASRCGHIQATVQESPGEEAVAYGTDAAPNDAAQWPYDCWYAVGYDRDIV
EGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNI
ECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWM
GENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLLD
PAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFG
SSKEMMSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLF
KTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGK
TLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHED
CRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAVSALLAAASVL
LSRAGAARGAAAAATAAPPGVGGLVAALGSLCSLGLAAAANALEARFYTN
FERHPSLG*
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spliced messenger RNA

>Ec-28_000110.1 ID=Ec-28_000110.1|Name=Ec-28_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1677bp|location=Sequence derived from alignment at chr_28:128098..139480- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAGCCAGAGATTGCCTCCTGGGCTGCCTCATCCTTTCGCCGCACGT
GCTGGTGGTGGCCTTGCATGTATCATCGTTCTCGCCCAAGATCCGGCATG
GGAGGAGTGCTCCCTCTGCTGCTGCAATGCTCGGGTCGCAGCAGCAGCAG
CATGCTTCTCGGTGCGGACACATACAGGCAACTGTCCAGGAGAGCCCGGG
GGAGGAAGCTGTAGCCTACGGTACGGACGCAGCGCCCAACGATGCAGCAC
AATGGCCGTACGATTGCTGGTATGCCGTGGGCTACGACAGAGACATCGTC
GAGGGCCCAAAGCCCTTCGCTGTGTCCATCTTCGACGAGCCCCTGATGCT
GTACCGAGACACCAGCGGCGCGCTGCAGTGCGTGAGCGACTTCTGCCCTC
ACCGCGCGGCCAAGCTTTCCGAAGGGCAGATTACGGAGGACGGCAACATC
GAGTGTCTTTACCATGGCTGGCAGTTTGAAGGCTCCAAGGGCGCTTGCGT
CAAAGTCCCGCAGCTTCCGGAAGGGGCAACCCCGCCTCGGGCGGCCACCC
TCCGCGTGTACCCGCTGGCGGTGAACGAGGGAGTTGTATACGTCTGGATG
GGAGAGAACCCTTGGGGGGAAGGGGCGAAGGACATTCTTCCCATTCCGTC
CACCCCGGACAACTTGGACGAGAACAAGCCGACCTTCACGTACGAGTTCG
TGTGCGACTTGCCGTACGACTGGAGCTACCTCACCGAAAACTTGCTGGAC
CCGGCCCACATCCCGGTTAGCCATGACAAGACCGAGGGCGGGGGCAACAA
AGAAAACGCCAGCCCCACCCAATTCGATATCGTTCAGGAGGGCCCCGACG
CGCCAAGCTCCACCGGGTTTTCGTCGATCGTGAAGTCGAGGGGCTTCGGC
AGCAGCAAGGAGATGATGTCGACGCGCTACCGCATGCACGCGCCGGGGGT
CATCCGCGTACGCTCCGAGGGCAAGAAGGAGGGGGAGCCGCTGTTCGGTG
CCGCTCTGCACTGCATCCCGCTAGGGAAGGGTCGATCGCGCCTCCTGTTC
AAGACGTACGCGATGAACTTCCCTCCGATGGTGGGCTTTATTTACGGTCT
CAAGCCCAAGTTTTTGCGGCACCTCAACTCGTGCAAGATCTTGGAGCAAG
ACATGAACCTGATTTGCGCCCAGGAGGACCACGTGGCCAGGACCGGCAAG
ACACTGTCGGAGTCGTTTCTGCCCATCAAGAGCTCGGACGTGCTGGTGGT
GGAGCTGAGGAAGTGGCTCGACCGCGTCGGCCACGGTATGCCTTTCTTCG
AGGGCTGGAAGAAGAGCAAGGAAGCGGCCGACCTTAACGACCACGAGGAC
TGCCGCCGCCCCAGCCACCGTGCTTTCGAGAGCCGGTACCACCGGCACGT
CCTAATCTGCGCCGAGACGCGCAGAGCCCTAGCCACCGTGAAGCGGGTCA
AGAAAGGAGGCCTCGCCGTCTCGGCCCTGCTGGCGGCGGCCTCGGTGCTG
CTGTCGAGAGCGGGCGCTGCGCGTGGCGCCGCCGCCGCCGCCACCGCCGC
CCCACCCGGAGTGGGGGGCCTCGTCGCGGCGTTAGGGTCGCTGTGTTCGC
TGGGGTTAGCCGCGGCCGCGAATGCTCTCGAGGCGCGGTTTTACACCAAT
TTTGAGAGGCACCCTTCCCTGGGGTGA
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protein sequence of Ec-28_000110.1

>Ec-28_000110.1 ID=Ec-28_000110.1|Name=Ec-28_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=559bp
MKARDCLLGCLILSPHVLVVALHVSSFSPKIRHGRSAPSAAAMLGSQQQQ
HASRCGHIQATVQESPGEEAVAYGTDAAPNDAAQWPYDCWYAVGYDRDIV
EGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGNI
ECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWM
GENPWGEGAKDILPIPSTPDNLDENKPTFTYEFVCDLPYDWSYLTENLLD
PAHIPVSHDKTEGGGNKENASPTQFDIVQEGPDAPSSTGFSSIVKSRGFG
SSKEMMSTRYRMHAPGVIRVRSEGKKEGEPLFGAALHCIPLGKGRSRLLF
KTYAMNFPPMVGFIYGLKPKFLRHLNSCKILEQDMNLICAQEDHVARTGK
TLSESFLPIKSSDVLVVELRKWLDRVGHGMPFFEGWKKSKEAADLNDHED
CRRPSHRAFESRYHRHVLICAETRRALATVKRVKKGGLAVSALLAAASVL
LSRAGAARGAAAAATAAPPGVGGLVAALGSLCSLGLAAAANALEARFYTN
FERHPSLG*
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mRNA from alignment at chr_28:128098..139480-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000110.1 ID=Ec-28_000110.1|Name=Ec-28_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11383bp|location=Sequence derived from alignment at chr_28:128098..139480- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAAGCCAGAGATTGCCTCCTGGGCTGCCTCATCCTTTCGCCGCACGT
GCTGGTGGTGGCCTTGCATGTATCATCGTTCTCGCCCAAGATCCGGCATG
GGAGGAGTGCTCCCTCTGCTGCTGCAATGCTCGGGTGAGATAGATCATGA
GGCAATAATACTAGCAACTAGCAACGACCACCTACCGCCTCCCGCACACG
TGGTAGAGGGTCTGGAGATGGTCATCTCAGCTGTGGTCTTGTGGTGTGCA
GCACCTCGCTCTTTGGCCGCGCAGCGTGCTCTTGCAGAGCAGAAAGTGTA
ACTACAACAGCCCAGCAGCATTTTTAATTCACCGCGGGGTATGTAGGTTC
ATGGTGACGTGTGATGGGAGATAGACCGAAAGGCACTGCGTACTTCCTGG
TGTCTCATGCACCTTCACCAGAGAGGAGAAGCACATTGGCTGGTACGTGG
CCGGGCAGGCAATGCCACCCGCATGGTGTTGTGGCTTCCCGGGGGGAGGT
AGCAAGAGGATCAGACAAGAAATCCGTAGCGCTCGCGGGTTGCTTTCGGA
GAACTACTGACTTGCTGCTGCTGTGTGTCGCCGAGCGTCCCCTGACTGCT
ACGTAAATCTGCAGCGCCCGGAGGGGCAGATGTGCCGCATGCTTCTGCTC
GTCTGGTGTGTCTATGATCGCGGTGTTCCGCAAAAGCCCCACAGCGTTTG
TAGGCACGTGATGCCCCCTCTCGACAACAAGCAGAAAACAGCACACGTAC
GGTGATGTCTGATCTCGTGGTAAGTTGTGAGCAACAAGCAGACAGAGCAC
GCCGTGTGCCCATGGTCAATCCTGGGGGTCTTCAAATTTTGCATCCACAT
CTGCGCACACTCACATCTTCTCTGTATTGTGCGTACACACCAGCAGCAGC
GCCCATCAACTCAATGGTTGTTGCAGCTGCTTTTGTGGACTCCTCCCACT
ACGCTACAGCCGGCAACAGCCAGAGACATAATTGCTCCTCTCCTGCTGTT
GTGGGAATGTGGGGGTGGTTTGCAGGTCGCAGCAGCAGCAGCATGCTTCT
CGGTGCGGACACATACAGGCAACTGTCCAGGAGAGCCCGGGGGAGGAAGC
TGTAGCCTACGGTACGGACGCAGCGCCCAACGATGCAGCACAATGGCCGT
ACGATTGGCGCAAACAGTTAAGAAGGAAGCATTCGGGGCGTGTGACGGCG
TCTGTGCTGTGTGTGGGCGGGCCTGGGGAGGAATGGAAATTTTGCGTCCT
CTCTGTAGCTGTTCATGTTACATGCTACAATACCGCCGTGTGTCCCTGCC
AGCAGCAGTCCCGGTAATATTATTGACAGGGAGGCCTGATCAAATTGGAA
TTTGCGTGTTGGTGCAGTACAGCAGTCTCCATGGGTAATAATGAGGAGGA
CTCGTGACAAAACGAAGAATAAAGTTCGGTGCTCTCTACGTATTCATAGT
CTATGTATTGTATGCATAAGACGGCGAAGGAACACACGGAGTCGCAACCG
TTCCGGTTGTGCTATTCCATGAACACTTGCTGTAGCTAAGCTCCGTCTCC
TGCTCTTTTAATGTGAACGCCTTTCCATGGCACTATAATATTGCAGCAGT
AGTCTACCGCCGAAGTGATGTCTAGTAGGTCTAGACAACCCAACAAAAAA
ATCGCACTTGGCGCTTGGCACTGCTTGGTCTGCGATGGTTGCCTCGCAGA
GGGAGAGAGAGAGCGCGGGCAACATTAACCATGTATGTGCTTGGGCGGAA
TGAGCGTTGGTAGATAACTGCTGTTCTGCGATGAACCAGGGAACGATGAA
GCATCAACCAAAATCAACGTCCCCTGCTGCTATAGCCATCTCAATAGACC
ACCGGTGCTTGTTGGCAATAGGGGCGAGAGCCTAACCGGCGAGAACCTCG
CGTGGAAAGAAAGATACGCATACGTAGTTGCTGTAGCATATGGTGATGAA
AGGGAAAAAAAAGTATTTTCGAATCTCCAGAATTGTTGTTGTTGTTGTTG
TCTTCACATTAAAAACCGTTCCGATCTCTCTCTACCCAGTACCTTCGTAT
GTCCGTACTGATCCAACACTCGACGCGGTCGATTCCCGTGGTCACAGAAT
ATCTGTCTTGATTTCTATTGACTTGCGGACCCCTCGGGGCCAGTTTGTTA
GAGCGTACCTTTTTAGGGTAGGTTAGCCTGTGACCACGGGAATCGACCGG
GTCAAGTGTTGGATCAGTACGGACATATGAAGGTACTGGGTAGAGAGAGA
TCGGAACGTTTTCAAATGTGAAGACAACAACAACAACAACAATACAAGAT
CTACACATCATCGCACGTATCTTGATGAGATCTTAGACCCTCTTGTAGTT
AGACTAGGTGTGGAGAATGGCATAGAGCCGGTGCGAACGAATACGGAGGT
TATTTTTTTTGGGAACCTTTTGTGTTGATTTTTTGTTTCTTGACTTTCTG
CCTTTGCCTCTCGCGTGTTGATTGAGAGGGGTGGACTTGGTGAAGTTTTG
CCTGTTTTCGATCTCCTGTGTACTTGGAAGTACTAGTGTTCTCCATCGCG
CCCATGTCGATTGATCGTGGTCCTCTTATTTCTCGGATTGTCACACTACG
TATGTCCGTACCCAAATCTGGGGAGTTAAGTCTATGGTGACAACGGCGTC
CGCGTCACAGCCTATGCAGAGACCAGGATGGGTTTTTTGTTGATGGATGG
ATTATTTTGAATGTGCAGACATGACATCACCCACGTTACCGTTACGTCAA
CCCTGCTGACCGCACAACACCGCTTCATCGGTTTGTTGCTGAACGGCAGG
AATGAATAAGTCTCAAGAGGTAGCAGGTATTTGTTGGCTATGGCGATGGC
CATGGTTGAGGTGGCCACAGGCTCACAAGCAGCTGTTAATAGACTCATCC
TTTTCGAGCGGAACCTGTGTGCCCAGGTTTCCGAGCTAGAGCAAGCGGTG
TGTTCTGTTCATGCCCTTCTTCTTCTTTTCCTCGTTGCTGTTGCTGTTGG
CGGTTGTCTTCGCACCACGAAAATCGTTCTTGGTTTTGCTTTCCGAGGTC
GCCTCTTCTTCTGTTTTGATTTGCTGCATACCTCTAGCTAGTGTCATGTC
CACACATACATGCACCGCCTCCATCAGCATGATGAACGGTCTCTACAGCA
GCGTACGTTCCCCCCCCGTCCCGTCTCGTCCCGTCCCGTGTACAGCTGGT
ATGCCGTGGGCTACGACAGAGACATCGTCGAGGGCCCAAAGCCCTTCGCT
GTGTCCATCTTCGACGAGCCCCTGATGCTGTACCGAGACACCAGCGGCGC
GCTGCAGTGCGTGAGCGACTTCTGCCCTCACCGCGCGGCCAAGCTTTCCG
AAGGGCAGGTGAAGTAGTAGCAGAACATGTACAATGTAGCCTTCACAGGG
TTGTATATATAGCATGCGATGGGAGAAAGTTGGGTTAGGGTTAGGGACAG
GTCTGCGTACCCCCTCCCTGTTCTGTTTCTTCCTTAACTTAATTTCTCGA
GAATTCGGTCACACAGCAGTAGTCTTGCGAGCAAGACTAGAGAGCAATAC
CGCTTGCTGCTGTGGGGGGTCTATTCACCAAGCAAGGTCGTTTGATGCGT
AGGAGAAGGTTTTAACGTTTCCCCTTTAACTGCTGTGGGTGCCATCAAGT
TCCTTCCATGAGGAATATGTTGTGCTGTGCGTGTCTCAAGTACAACGTGC
AATGACGTAGAAGAGTACCTCGAGGTTTTGGTGGTACAGGCAACAGCACA
GCAGCGTTGGATAAAGCCCGTTGGAGTCAGGAGTGGGTTGAGAGCAGCGG
CGTTGATGGCGAACACACGCACGGCACAGTAGTAAATAGTAGTGGCGTTG
AGTTGTGTCAGCGTTTGTCGACGGGCCTTCCCACGGAACCGATTTGGGGC
GTGGGTGGGTAGGCCTTCCTAGAATGTCCGCTCTCACTCCCATGGCCCTT
ACGGCGTGTGCCAGTGACCTCTCGAATTGCCTTGGCTACCGCTCTGTATT
TTTGGGGGGTTGGGCCGGCGCGCTCGACTCCCTCACCGCTCTACCTGCAG
AGTCGGTGGGAGTTGGTGCCGTCTCTTGCCCTTTTGCGGACCGGCCGCCT
TCTCTGGGCAATGTTTGGCGAAACGTGAGGGTGAAACCTGCACCGGACGT
AGCTGTACCGTTTGCCCATTAGCATTCTTAAGTGCCGCTGAACTCGCTTC
GAAAGTCGTCTCTGAAATTTGCCAGCAAGCGAGTGGTGCCGGTGCCGAAG
GGGGCGGTGGTTTCTACCGTACGTTATACTATGTGGGTCGTCGGGCGGCG
GTTGCCCGTGCAATGTCCTAACACAACAATGCTTGCCAACCCGTGGACAG
ATTACGGAGGACGGCAACATCGAGTGTCTTTACCATGGCTGGCAGTTTGA
AGGCTCCAAGGGCGCTTGCGTCAAAGTCCCGCAGGTGCGCGCGATATCCC
CCCCGGACCCGCTGCTCCATTTTATGCTTGTGTTCCTGTGAACGAAAGGG
GAATGTAGTCTGTTTTCCAACATCGTTGATGCAGAGCCCGGTGTTTGTTG
CATAGATCTAGTTATCGTTTTGGTGCTTTACAGCACGCCCTCCGACAGAC
AGACCACTAGGTCTGAACCACGCACACACATCTGCAGACGACAAAAAACA
AACAACGTACCCGTTACATCAGTCTTGGGATGATTTCTTCGAAACGCGAG
TTTTTGACGCCCATTTTCTCAGCGCATTGCACCCTTGTGTTTTCATGGCC
TGGCATTGCTGCTAATGCCTTTGGTCCTGCCGCTGACTGGCTGACTCAAT
GCGCTTGTGGGGCGCATGTGTGCTTTACTCCGCTACCGTACCGCTGCAGC
TTCCGGAAGGGGCAACCCCGCCTCGGGCGGCCACCCTCCGCGTGTACCCG
CTGGCGGTGAACGAGGGAGTTGTATACGTCTGGATGGGAGAGAACCCTTG
GGGGGAAGGGGCGAAGGACATTCTTCCCATTCCGTCCACCCCGGACAACT
TGGACGAGAACAAGGTACGCTTGAGAGAGCAACGTTTGACGGGCGGCTTT
CTCGGACCCGTTTCTTGAGAGACACAGCTAGTGTCAACTCGCAGTTTGAA
GCGTGAGGTTGGGAGTGCGGCATAGCGTCCCGCCGCTTGCCTTGTCCATC
CCTTCTATTTATACGACGTTGCTCATACACGAGCGCTGTATGTCATCGAC
GGTTGCCGTCCTCGCTGTTATGAGGCGTGGGGGCGAGGTTGGGCATTTCC
ACCGCTGTACGCATAGCGTCGCCTAGCCTGTCGTCGCCAAACCAAGACGG
CCGCAAGAAATAGCTTCTGGGCAAGTTTACGCAAAGCCGCCGCCCCTTGT
TTCTCCACTCCAACAGCAGCAGGCACCCACACACCGAGCACGGGGTTATC
AATTTCTTTGCGGCGTATGTGGAACAAAAAAATACGAAGCCGCTCCCGAA
TACGGCAGCCAGCCGAGGGTACCTTGTTGTCTGCCACACTGCTGCACACC
TACCGCTGTAAACCGCGCCCTGGTCCGTGCTGGAAACGGCCGTTACCGGA
CATTGTTGCGTTCCACTTGGTTGCTATCTCCGGTTTTCTTCGCCTCGAGT
TGTTGTTTAGATTTTGGCCTCTGACTTGTTCGTGGTGATTCGATTCCCGT
GCGCGTCATCCAGAGTTGTCAAAAAGCTCCCCTTTAGTTTCTAATCTTGT
ATCCCGTCGCGTGCTTGTTGCTTCGCTTCGATCGTTGTGTGCGGTGTGGT
GTTCCGCGATCACGGACGGAACGACGTTTCCACCGCGCCGTCTCAGCCGA
CCTTCACGTACGAGTTCGTGTGCGACTTGCCGTACGACTGGAGCTACCTC
ACCGAAAAGTGAGTGCCTTCACGATATTCACGGCGTGAGCGAAGGTTTGC
GTCGCAGCAACAGCAAAAAGTGATTGGATTCTTACTTCCTACAGTGCAGC
AGTGGTAGACCGTAGAGTAATATACGCAACGATGCGCTCCACGCACGACC
ATTCCGAGTACTGTAGTTCCCCCTTACCCCCCCTCCCCCCCACACACCCG
CCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAACGA
CGTTGTAAAACAAGCCCCCCCCCCCCGGTGTTTGCCATCGGGATTGGGTT
TTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCAATTCACTTCGTGAAC
TCGGCAACCAGGTTACCGTTTTTTTTTTACCTCTGTTTTTTTTTTGGCGG
TTACCATAATGGTCGAGTAGATTATGTTGTGCGGGGTGGAGAAACCTCAC
TCCGCGCAAGGGGCATGGTCGCACCACGTTGTGTTAAATTGGTCAAGCAT
CCTCGAGGCAGTTACAAAGCGCTTACAACTGTCTCTGGAAGTGAAAGCAC
CAGAAAATAAATTAAGTCATACGTAGCTGTCATCCGTACGCAAGGAAGTA
AGCACAAGATGCCGAACACCCTTAGCAGGATGCAGCTCACCCTTCATGCG
ACTCGCCGAATACCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGG
TCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGT
CAATGGTCTAACGACTACGGCATGCACGACTATGAGTACACCCCCCCACA
CACACACACACCCCACCCAATCCTCGACGTCCGCGTGCTTCTGCTGCCTG
CGCCGTTCCGTGCGCTGCTCGTGATCCGGCAGCTTGCTGGACCCGGCCCA
CATCCCGGTTAGCCATGACAAGACCGAGGGCGGGGGCAACAAAGAAAACG
CCAGCCCCACCCAATTCGATGTGAGCATGCATTTCATAGTTGGAAACGAG
AATGTTTCTCCGCGTTCTCGGGTACAGTAGTGGTGCAAATGGCACTGCTG
TGTGCTTCCTAGTAAAAAAATTCTGATGCGCGTTTATAGACGCAGTGCGC
AACGAATGCAAACCGTGTTCGCACCATCCTGTAGGTAGGTAGGTAGGTAG
GACAGCTGAGACTCGGCTTACTAGCTACTTCCAGAGGGTTGGAAACGCGG
GGGGCGCGCCAACCGCGCGGTGCACGACCGGTTTTTTTTTTCCCGTTCGA
TTGCTGGAAAAGTTGGACATTTTTGTGTCTGTCCTGGTATTGTTACTGGT
CGGTCGTGGGGTCTACGATGTCGATGGGGCCCCCCATTTTCTCTGTCGCT
ACCGCTCCTTAGATAGGTAGTCGTGTTACATAACCACGTCGCAAGAGTTT
TATTTAAGCCCGATTACAGCACTGTACCCCCATTATTCGAAGGAGGGTTC
AAGAGAACGAGGTGTCGGCCTTACGGAATCCCGAAATCGATTGAGAGACG
TGCTCTCGTCGTTGGCTGGTAAAGTACCACAGGACGACTGGCGGCCCGGG
GGGGAGGTGGGGGAGGGGGGCGTACTCATTTGTTGCTTGCCATAGTCATT
TGACCATTGACCACGCGTCCCTTTCGAGACGGAGCACCGTTCTTACACCT
ACTAGAGACACCACCAACATTTGGGAGCTCTTTACGTTTCTGCCACAAAC
TCCATAAAAATTTCTTGCACATCTTATCCCCGTCCTCTAGGGCCTCTTGT
GCCCACCATCTATCCCCAATTATCGCGATCGTTTTTTCGCTGTTGTCTAA
TTTACCAAACTTGTCCATGTCACACCCTCTCTGTCTCATTTCCTCCTCGA
GATCCTCTCTTTCCTTCCTGTACAACTCACACTCCCCAACTATGTGGGGT
CTACTCTCCTCCGATTTGCCACATGGACATGTGTGTCTATCCTCCTCTTC
CTCTCTCCTACGGCTGGTATACCTCTTCCTCCGTTCTGGCAAGTCCAGAT
CGCCTACTCGAAATTGCAATTTCAGCTTTTTCGCATAGTCCATGGGGCCG
TCCAAGATCGTCTTCATCCCTATCCCTTCTTTCAACTTCCCGTATATCTC
CAAGTGGTCTTCGCTTCGTACCTTCTTCCGAAGGGTTGCCTCCTCCCTAC
TCTCTAGCATCTCCTTGACTTTCGTCTTGAACCCCCCGAACCCTTCCGTG
TCCAACGTCTCCTCCTCGTCTCCTATCTCCTTCCAAACCTTCTCTACCAC
CTTGTCCCATCTGATTCCCTTCTTCCCTGGAGTCGCTTTTCCCCAAGCTA
CCTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTAAATTTTTGTAAAAGGGGGGGGGGGGGGGGGGGGGGG
GGGCGTACTCTTATGTTTTGCATGCGAATCTTCTTTCGCAACCGTGCTCG
GGTGGGAAACACGTTCAGTAACACACCGCTCTCCCACACGTTTGGGGGCA
GGTAGATAGGTGTCTACCGTTCATGGCGAGAAAAGCTGGACTTTCGAAAA
CCTTCTTTGCACCGTCAATAAAAGAAACATTTGCTTGTATGTTTCCTCCG
GTGGAACAGATCGTTCAGGAGGGCCCCGACGCGCCAAGCTCCACCGGGTT
TTCGTCGATCGTGAAGTCGAGGGGCTTCGGCAGCAGCAAGGAGATGATGT
CGACGCGCTACCGCATGCACGCGCCGGGGGTCATCCGCGTACGCTCCGAG
GGCAAGAAGGAGGGGGAGCCGCTGTTCGGTGCCGCTCTGCACTGCATCCC
GCTAGGGAAGGGTCGATCGCGCCTCCTGTTCAAGGTATATACTCTTCGTT
GGCGTGCTCCACGACGACCCGCTGGAAGGGTAGTTAGGTCTGCAGGGTTC
TGTTGAAGTGTCTGCTGAAAGGTTTCGATTCTTGCATAGGCGATATGGTT
AATTGAACAGCCAATGCGTGGATCGGGGCAATCACGGCTGAGAGTGCAGC
GATTGCTAGCTTTTGCTTGGCTAGTTGCTGGTGCCCAGAATCGATGTTGG
TCGTCATCGCGTGTGCCAGGCACATGGCGGCGCCGCACGTTGTTCCCGCG
TTGTTCACCAGCATCCATAATGGCTCGCCCTGCGTTGTCTCCAACAGCGT
GTTCCACCGCCCGTCTTGGCTGCCCCCTCACCCCCTTGTCCTTGTCCGCC
CCTCCCTACGTTTCTTGCGTCTCTTCGTTTTCTCGCCAGACGTACGCGAT
GAACTTCCCTCCGATGGTGGGCTTTATTTACGGTCTCAAGCCCAAGTTTT
TGCGGCACCTCAACTCGTGCAAGGTGCGTGCAACCCCCCCCCTGACCGAG
AGATAGGTGACGTGTTCTAGGCCTCTCCAGGCACTCGTTTCAAAGCGCTA
ACGTGTTTCATCTCTCCCAAGTAGAAACACCGGACAGAGAAAGCTACCGA
GATCGATTCTCGAGAAGCAGGTACGATCCCAATAAACACGAGGAACTCAT
GGAAGTGGCGTGAACCCGCCGCCTTGCCGCCCCCGCCCCCCCCCCCCCCC
CCCCCCCCCCCGGGATTGGGGGGGGGGCCCCCCCCCTTTTTGGGGGGGAA
ATTCCCAAAAAACCCTGAAAAACCCCCCCAACCGGGGCCCCTTTTTTTTT
TTTTATAGGGGGTTCCCCCCCCCCCCCTTTTTTCGGGGGGCCCCCTCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCCGCCCCCGCATCTGCCGTGGCGCGACTCCTCC
TTCTTGCGGAGCACATCTCCGAAAATCCCTGAAAACCACCCCAACACGTG
ACCGTCTTAGTTCATTTCCAAGTGCGTTCTACGCACGACCCTGTATCTGC
GGCGCCCGTATCCGCTAGCATAAAACCCCACGGCGAGTCAATCCATTGCG
GTTGCTCATTTCCGTTTTCGTTGTGCCGGCGGCTTGTTGCTCCCCTCCCT
CCGACACATGGTCCCCAAACGGCTGGTGCGTTCTCCCCGCCCCCTGTTGC
TCTGCTCTGACGGCGTGATGATGGATGGCAGATCTTGGAGCAAGACATGA
ACCTGATTTGCGCCCAGGAGGACCACGTGGCCAGGACCGGCAAGACACTG
TCGGAGTCGTTTCTGCCCATCAAGAGCTCGGACGTGCTGGTGGTGGAGCT
GAGGAAGTGGCTCGACCGCGTCGGCCACGGTATGCCTTTCTTCGAGGGCT
GGAAGAAGAGCAAGGTACGCGCGCGTGTGTGTGTGTGTGTGTGTGTGCGT
GTGTGTGTGTTTATTGTTAGCATCGACCGCGCTAACCGGCTGGCCAATGA
AAAGACTCCATTCTCAGTGCGGTTGAAAACAAGTGTGTGTGTGTGTGTGT
GTGTGTTTGTGTGTGTCTGCGCGACCACGTGGGCGAACATCTCTCCTTCA
TCATTAGTATCGACCGCGCCAACCGGCTGACCAACCCATGAAAAGGCTTC
AGCCTCAGTGCGGTTGAAGACGCCAAATTCTTCGGAAGGCCACGATCTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTCGTGCTTTATCATTGTCAATGACC
GCGCGAACCGGTTGACCAACCAATGAAATACGCCAGCCTCGGTGCGGCTG
AAAACAGAGAACGCTTTTATTTGCCATGATCTGGGACTGTGTGTGTGCGC
GCGCGTTAGGTTGTTTGCTGATGTGTGGTTCATGGCGTAGCACCGGCCGT
GCTAACAGGCGGACCAAGGAAAATATATCAGTGTCAGCGGGTACAAGCAT
CAACGTCGCCTTTAGGGGGCCAAAGTTGCAAGATGGGCGTGTGCGTGTGT
GCGAGCGATTGATTGTTTGGTCGACAACGACTACGCTAACCGGCTGACCA
ATGGCAAGACATCAATCTTATGCACAGCTGGCCTATCCGGCGTGTGTGTT
CATGCTGGCCCCTTGTCTCAGCGCCTTGCTTGCGTGTGCCTTCCCGCCGT
AACCCTACCCCCCGCCGAACGAACCCTTCTTCGCTTCGCTTGCGCACCGG
CGTGCTTGGGTTCTCGCGTCCCTCAGGAAGCGGCCGACCTTAACGACCAC
GAGGACTGCCGCCGCCCCAGCCACCGTGCTTTCGAGAGCCGGTACCACCG
GCACGTCCTAATCTGCGCCGAGACGCGCAGAGCCCTAGCCACCGTGAAGC
GGGTCAAGAAAGGAGGCCTCGCCGTCTCGGCCCTGCTGGCGGCGGCCTCG
GTGCTGCTGTCGAGAGCGGGCGCTGCGCGTGGCGCCGCCGCCGCCGCCAC
CGCCGCCCCACCCGGAGTGGGGGGCCTCGTCGCGGCGTTAGGGTCGCTGT
GTTCGCTGGGGTTAGCCGCGGCCGCGAATGCTCTCGAGGCGCGGTTTTAC
ACCAATTTTGAGAGGCACCCTTCCCTGGGGTGA
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Coding sequence (CDS) from alignment at chr_28:128098..139480-

>Ec-28_000110.1 ID=Ec-28_000110.1|Name=Ec-28_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1677bp|location=Sequence derived from alignment at chr_28:128098..139480- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAAGCCAGAGATTGCCTCCTGGGCTGCCTCATCCTTTCGCCGCACGT
GCTGGTGGTGGCCTTGCATGTATCATCGTTCTCGCCCAAGATCCGGCATG
GGAGGAGTGCTCCCTCTGCTGCTGCAATGCTCGGGTCGCAGCAGCAGCAG
CATGCTTCTCGGTGCGGACACATACAGGCAACTGTCCAGGAGAGCCCGGG
GGAGGAAGCTGTAGCCTACGGTACGGACGCAGCGCCCAACGATGCAGCAC
AATGGCCGTACGATTGCTGGTATGCCGTGGGCTACGACAGAGACATCGTC
GAGGGCCCAAAGCCCTTCGCTGTGTCCATCTTCGACGAGCCCCTGATGCT
GTACCGAGACACCAGCGGCGCGCTGCAGTGCGTGAGCGACTTCTGCCCTC
ACCGCGCGGCCAAGCTTTCCGAAGGGCAGATTACGGAGGACGGCAACATC
GAGTGTCTTTACCATGGCTGGCAGTTTGAAGGCTCCAAGGGCGCTTGCGT
CAAAGTCCCGCAGCTTCCGGAAGGGGCAACCCCGCCTCGGGCGGCCACCC
TCCGCGTGTACCCGCTGGCGGTGAACGAGGGAGTTGTATACGTCTGGATG
GGAGAGAACCCTTGGGGGGAAGGGGCGAAGGACATTCTTCCCATTCCGTC
CACCCCGGACAACTTGGACGAGAACAAGCCGACCTTCACGTACGAGTTCG
TGTGCGACTTGCCGTACGACTGGAGCTACCTCACCGAAAACTTGCTGGAC
CCGGCCCACATCCCGGTTAGCCATGACAAGACCGAGGGCGGGGGCAACAA
AGAAAACGCCAGCCCCACCCAATTCGATATCGTTCAGGAGGGCCCCGACG
CGCCAAGCTCCACCGGGTTTTCGTCGATCGTGAAGTCGAGGGGCTTCGGC
AGCAGCAAGGAGATGATGTCGACGCGCTACCGCATGCACGCGCCGGGGGT
CATCCGCGTACGCTCCGAGGGCAAGAAGGAGGGGGAGCCGCTGTTCGGTG
CCGCTCTGCACTGCATCCCGCTAGGGAAGGGTCGATCGCGCCTCCTGTTC
AAGACGTACGCGATGAACTTCCCTCCGATGGTGGGCTTTATTTACGGTCT
CAAGCCCAAGTTTTTGCGGCACCTCAACTCGTGCAAGATCTTGGAGCAAG
ACATGAACCTGATTTGCGCCCAGGAGGACCACGTGGCCAGGACCGGCAAG
ACACTGTCGGAGTCGTTTCTGCCCATCAAGAGCTCGGACGTGCTGGTGGT
GGAGCTGAGGAAGTGGCTCGACCGCGTCGGCCACGGTATGCCTTTCTTCG
AGGGCTGGAAGAAGAGCAAGGAAGCGGCCGACCTTAACGACCACGAGGAC
TGCCGCCGCCCCAGCCACCGTGCTTTCGAGAGCCGGTACCACCGGCACGT
CCTAATCTGCGCCGAGACGCGCAGAGCCCTAGCCACCGTGAAGCGGGTCA
AGAAAGGAGGCCTCGCCGTCTCGGCCCTGCTGGCGGCGGCCTCGGTGCTG
CTGTCGAGAGCGGGCGCTGCGCGTGGCGCCGCCGCCGCCGCCACCGCCGC
CCCACCCGGAGTGGGGGGCCTCGTCGCGGCGTTAGGGTCGCTGTGTTCGC
TGGGGTTAGCCGCGGCCGCGAATGCTCTCGAGGCGCGGTTTTACACCAAT
TTTGAGAGGCACCCTTCCCTGGGGTGA
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Synonyms
The feature 'Ec-28_000110.1' has the following synonyms
Synonym
Esi0120_0020
Esi_0120_0020