Ec-27_005580.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005580.1
Unique NameEc-27_005580.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1030
Homology
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: D8LB19_ECTSI (Similar to RING finger protein 122 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB19_ECTSI)

HSP 1 Score: 1478 bits (3826), Expect = 0.000e+0
Identity = 966/966 (100.00%), Postives = 966/966 (100.00%), Query Frame = 1 
Query:  190 MASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQRHLDEEVAKATPASAXXXXXXXGETVEAPAQATEVIKGDPLLHALVRCSRQLTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSLATPLGNWTGSPERIETRDAGRPVAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRAGRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVAAAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGXXXXXXXXXXXXRQDAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAASGDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGXXXXXXXXXXVGSSRRVASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNRGGPPDAEEEKLVNALFDEASYRAILGNVPAANGSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGRSRGDGWLLSSVSSQVFRPREASAAAAALAEPSQGIDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 3087
            MASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQRHLDEEVAKATPASAXXXXXXXGETVEAPAQATEVIKGDPLLHALVRCSRQLTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSLATPLGNWTGSPERIETRDAGRPVAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRAGRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVAAAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGXXXXXXXXXXXXRQDAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAASGDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGXXXXXXXXXXVGSSRRVASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNRGGPPDAEEEKLVNALFDEASYRAILGNVPAANGSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGRSRGDGWLLSSVSSQVFRPREASAAAAALAEPSQGIDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ
Sbjct:    1 MASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQRHLDEEVAKATPASAXXXXXXXGETVEAPAQATEVIKGDPLLHALVRCSRQLTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSLATPLGNWTGSPERIETRDAGRPVAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRAGRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVAAAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGXXXXXXXXXXXXRQDAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAASGDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGXXXXXXXXXXVGSSRRVASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNRGGPPDAEEEKLVNALFDEASYRAILGNVPAANGSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGRSRGDGWLLSSVSSQVFRPREASAAAAALAEPSQGIDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 966
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A6H5L8B3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B3_9PHAE)

HSP 1 Score: 1007 bits (2604), Expect = 0.000e+0
Identity = 720/1010 (71.29%), Postives = 749/1010 (74.16%), Query Frame = 1 
Query:  190 MASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQRHLDEEVAKATPASAXXXXXXXGETVEAPAQATEVIKGDPLLHALVRCSRQLTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSL-ATPLGNWTGSPERIETRDAGRPVAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGS---GRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRAGRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVAAAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGXXXXXXXXXXXXRQDAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAASGDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGXXXXXXXXXXVGSSRRVASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNRGGPPDAEEEKLVNALFDEASYRAILGNVPAANGSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGRSRGDGWLLSSVSSQVFRPREASAAAAALA-EPSQGIDEDEAAARRFAKQEQEAQAREDELLALR---------------------------------------LAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 3087
            MA V+A SSSSSID+TAGGRALRAAGEI IAL+ELQRHLDEEVAKATPA A       GET EAPAQATEVIKGDPLLHAL+RCSRQLTKLRHSLLAQ  G   SLQ RGRPVAVTN+GRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSA VTSGSGGAADVAGAAGDGD G PAESRTE QPSSL ATPLGN   SPERIETRDAGRPVAAA  XXXXXXXXXXXXXXXXXXXXXXXXXX        +      G K+ SGGGVYRNQGI RG SGSVRSCRSQAAAAAGVGGLWRAGRN+GVERGTRVGGA+SAAVAAWGAAPPKATATEMAVSLGLAPVTR DVAAAAEDRKRRAA+ LRV+MSG+ AGGAEGVEGYGKAG            RQDAA FQF SGKPSPVERQR           E  RR+RPPTSA WLDGA+SGDWL ++SGEGASSHA                  XXXXXXXXXX    RR+ASGHRSPSGSLVSARLASPE LRSAGRTALDVRRRLVAA  XXXXXXXXXXXXXXXX                       VRNRGGP DA+EE+LVNA+FDEASYRAIL NVPAANGS PLXXXXXXXXXXXXXXXXXXXXXXXXX  SRSPP SLSAPRAVARRRGMIG  PPAGP RGGRGPGRWD PSTP+ +DGRS+GD  LLSS SSQV RPREAS        EP QGIDEDE             QA+   +  LR                                                                                     +     +SDA+RALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLA+EAMEA LQ G AAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ
Sbjct:    1 MAGVMAESSSSSIDITAGGRALRAAGEIDIALLELQRHLDEEVAKATPA-APALATAAGETGEAPAQATEVIKGDPLLHALLRCSRQLTKLRHSLLAQVDGTQGSLQRRGRPVAVTNEGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSALVTSGSGGAADVAGAAGDGDSGGPAESRTEGQPSSLEATPLGN--SSPERIETRDAGRPVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGGEGGAXXXXXXGYKNNSGGGVYRNQGIPRGSSGSVRSCRSQAAAAAGVGGLWRAGRNTGVERGTRVGGAQSAAVAAWGAAPPKATATEMAVSLGLAPVTRGDVAAAAEDRKRRAASLLRVAMSGSRAGGAEGVEGYGKAGGGEASAASSAAGRQDAAIFQFESGKPSPVERQRXXXXXXXXXXXEAMRRERPPTSAAWLDGASSGDWLTNRSGEGASSHAXXXX----XXXXXXXXXXXXXXXXXXXXXXXXRRIASGHRSPSGSLVSARLASPEHLRSAGRTALDVRRRLVAAXXXXXXXXXXXXXXXXXX-----------------------VRNRGGPSDADEEQLVNAVFDEASYRAILDNVPAANGSCPLXXXXXXXXXXXXXXXXXXXXXXXXXTGSRSPPSSLSAPRAVARRRGMIGVMPPAGPGRGGRGPGRWDSPSTPLVNDGRSQGDSRLLSSASSQVLRPREASXXXXXXXXEPPQGIDEDEVG-----------QAKGVCVACLRGGVVCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGAAAVSDAIRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLAEEAMEAALQAGTAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 969
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A3B3HUY6_ORYLA (RING finger protein 122 n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3HUY6_ORYLA)

HSP 1 Score: 71.2 bits (173), Expect = 1.070e-10
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVI---PDSPQ 3087
            L+++CAVC+EEF   DE+ V PC HAFH  C+ KWL +R+ CP C K ++   PD+PQ
Sbjct:   83 LQQTCAVCLEEFRTRDELGVCPCSHAFHKKCLLKWLEIRSVCPMCNKPILRLHPDAPQ 140
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A139AMM9_GONPJ (RING-type domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMM9_GONPJ)

HSP 1 Score: 68.6 bits (166), Expect = 5.500e-10
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 1 
Query: 2782 IDENDFETLLALDEAGGE------GGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTC 3057
            I+  D+ETLLAL E  GE       GR  AG   L  +   A  Q         +  CAVC+E+F  G+E+++LPCLHA+HG C+R WL     CP C
Sbjct:   35 IEGADYETLLALGERVGEVKQRGLDGRTLAG---LPTKIYRAPWQN-----VSDDSRCAVCLEDFQDGEELALLPCLHAYHGVCVRTWLKGNGVCPVC 124
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A3Q3F0R0_9LABR (Zgc:175214 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3F0R0_9LABR)

HSP 1 Score: 68.2 bits (165), Expect = 7.500e-10
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVI---PDSPQ 3087
            L+++CAVC+EEF   DE+ V PC HAFH  C+ KWL +R+ CP C K ++    D+PQ
Sbjct:   62 LQQTCAVCLEEFRTRDELGVCPCSHAFHKKCLLKWLEIRSVCPMCNKPILRLHTDNPQ 119
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A8C1AFM0_CYPCA (Si:dkey-51a16.9 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1AFM0_CYPCA)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-9
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVI---PDSPQ 3087
            L+++CAVC+EEF   DE+ V PC HAFH  C+ KWL +R+ CP C K +    PD PQ
Sbjct:   77 LQQTCAVCLEEFRSRDELGVCPCSHAFHKKCLVKWLEIRSVCPMCNKPICRLQPDLPQ 134
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A674MI57_TAKRU (Zgc:175214 n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674MI57_TAKRU)

HSP 1 Score: 68.2 bits (165), Expect = 1.180e-9
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVI---PDSPQ 3087
            L+++CAVC+EEF   DE+ V PC HAFH  C+ KWL +R+ CP C K ++    D+PQ
Sbjct:   80 LQQTCAVCLEEFRTRDELGVCPCSHAFHKKCLLKWLEIRSVCPMCNKPILRLHTDAPQ 137
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A674MM78_TAKRU (Zgc:175214 n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674MM78_TAKRU)

HSP 1 Score: 68.2 bits (165), Expect = 1.460e-9
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVI---PDSPQ 3087
            L+++CAVC+EEF   DE+ V PC HAFH  C+ KWL +R+ CP C K ++    D+PQ
Sbjct:   89 LQQTCAVCLEEFRTRDELGVCPCSHAFHKKCLLKWLEIRSVCPMCNKPILRLHTDAPQ 146
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A7J5YSK5_DISMA (RING-type domain-containing protein n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7J5YSK5_DISMA)

HSP 1 Score: 65.1 bits (157), Expect = 2.220e-9
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 1 
Query: 2923 LEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 3087
            L+++CAVC+E+F + DE+ VLPC HAFH  C+ KWL +R  CP C K +     Q
Sbjct:   12 LQQTCAVCLEDFKVKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPPEQ 66
[Close]
BLAST of Ec-27_005580.1 vs. uniprot
Match: A0A673IB25_9TELE (RING-type domain-containing protein n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673IB25_9TELE)

HSP 1 Score: 67.4 bits (163), Expect = 2.400e-9
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1 
Query: 2926 EESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 3087
            +++CAVC+E+F + DE+ VLPC HAFH  C+ KWL +R  CP C KA+   S Q
Sbjct:   87 QQTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMCNKALAGSSEQ 140
The following BLAST results are available for this feature:
BLAST of Ec-27_005580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB19_ECTSI0.000e+0100.00Similar to RING finger protein 122 n=1 Tax=Ectocar... [more]
A0A6H5L8B3_9PHAE0.000e+071.29RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A3B3HUY6_ORYLA1.070e-1051.72RING finger protein 122 n=2 Tax=Oryzias latipes Ta... [more]
A0A139AMM9_GONPJ5.500e-1041.84RING-type domain-containing protein n=1 Tax=Gonapo... [more]
A0A3Q3F0R0_9LABR7.500e-1050.00Zgc:175214 n=1 Tax=Labrus bergylta TaxID=56723 Rep... [more]
A0A8C1AFM0_CYPCA1.090e-951.72Si:dkey-51a16.9 n=2 Tax=Cyprinus carpio TaxID=7962... [more]
A0A674MI57_TAKRU1.180e-950.00Zgc:175214 n=1 Tax=Takifugu rubripes TaxID=31033 R... [more]
A0A674MM78_TAKRU1.460e-950.00Zgc:175214 n=1 Tax=Takifugu rubripes TaxID=31033 R... [more]
A0A7J5YSK5_DISMA2.220e-949.09RING-type domain-containing protein n=2 Tax=Percom... [more]
A0A673IB25_9TELE2.400e-951.85RING-type domain-containing protein n=1 Tax=Sinocy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5063214..5072519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1502.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LB19
Length3090
Hectar predicted targeting categoryother localisation
Gene idEc-27_005580.1
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005580Ec-27_005580Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5063214..5072519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005580.1Ec-27_005580.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5063214..5072519 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005580.1.1Ec-27_005580.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5063214..5063525 +
Ec-27_005580.1.2Ec-27_005580.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5065462..5065632 +
Ec-27_005580.1.3Ec-27_005580.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5066389..5066517 +
Ec-27_005580.1.4Ec-27_005580.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5068338..5070242 +
Ec-27_005580.1.5Ec-27_005580.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5070680..5071135 +
Ec-27_005580.1.6Ec-27_005580.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5072403..5072519 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005580.1CDS:Ec-27_005580.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5063214..5063525 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005580.1 ID=Ec-27_005580.1|Name=Ec-27_005580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1030bp
MPPFPSCLKKERDHANSWIEGTAVVPDSPSVLRGGLCPFCDSDTLDTQVI
SVSHDPLFRRAGKMASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQR
HLDEEVAKATPASASAPAPAPGETVEAPAQATEVIKGDPLLHALVRCSRQ
LTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMY
HGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFP
PHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSLATPLGNWTG
SPERIETRDAGRPVAAAAGAAAGAAAGAAAGAQVGAGAGAGAATGGGEGG
AAGSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRA
GRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVA
AAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGGGGASAASSAARRQ
DAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAAS
GDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGAAAAAAAAATVGSSRR
VASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSGSGSGSGS
GSGSGSGSGSGSGSSEGRRRSASAAAAAAAAVRNRGGPPDAEEEKLVNAL
FDEASYRAILGNVPAANGSSPLDEERLANALFDEASYRAILGERPTLTGS
RSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGR
SRGDGWLLSSVSSQVFRPREASAAAAALAEPSQGIDEDEAAARRFAKQEQ
EAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYIS
PDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCC
AGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHA
FHGACIRKWLLMRNRCPTCLKAVIPDSPQ*
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spliced messenger RNA

>Ec-27_005580.1 ID=Ec-27_005580.1|Name=Ec-27_005580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3090bp|location=Sequence derived from alignment at chr_27:5063214..5072519+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCCGTTCCCCAGCTGTTTGAAGAAGGAGCGAGACCACGCCAATAG
CTGGATAGAGGGGACAGCAGTAGTACCAGACAGCCCTAGCGTTTTGAGAG
GTGGGTTGTGCCCGTTTTGTGACTCTGACACGCTGGACACGCAGGTCATC
TCTGTGTCACACGACCCGCTCTTCAGGAGAGCTGGAAAAATGGCAAGTGT
CATCGCGGGAAGTAGCAGCAGCAGCATTGATGTTACAGCGGGCGGCAGGG
CTTTGCGGGCGGCGGGCGAGATTGGCATCGCGTTGGTAGAACTCCAGCGA
CATCTGGACGAGGAGGTTGCCAAGGCCACGCCGGCGTCGGCGTCGGCGCC
GGCGCCGGCGCCAGGTGAGACGGTCGAAGCCCCTGCGCAAGCCACGGAGG
TGATCAAGGGGGACCCACTGCTGCATGCTCTCGTCCGCTGTAGCCGCCAG
CTGACCAAGCTGAGACATTCGCTGCTCGCACAGGCGCACGGGCCCCATGA
ATCGTTGCAGCACAGGGGGCGGCCCGTGGCGGTCACGAACGACGGGCGGA
AGGCGCAGTCCACTCTTCTGCATGCGCAGCAAATCGCCGACGACATGTAT
CACGGATCGCTGGCACAGCTGAACGACCCCTTTAGCGCTGAGACCGGTTA
CCACTCCAAGGTGCTCGACACGGTCCAGTCCTGCGACAGGGCCAACGCGG
TGACGGCGTCGGCCCTAACTCTAGTCATCAGCGCGCTCTCGGGGTTCCCG
CCGCACTCCTCCGCGCCCGTGACAAGCGGTAGCGGAGGCGCCGCTGACGT
CGCCGGTGCTGCCGGCGATGGCGACGGTGGGGCCCCCGCGGAATCACGAA
CGGAGAGACAGCCGTCTTCCCTGGCAACCCCTCTCGGAAATTGGACTGGT
AGTCCCGAACGAATCGAAACCCGCGATGCCGGGAGGCCGGTAGCGGCGGC
AGCGGGAGCGGCAGCGGGAGCGGCAGCGGGAGCGGCAGCGGGAGCGCAAG
TGGGAGCGGGAGCGGGAGCGGGAGCAGCAACGGGAGGAGGAGAGGGAGGA
GCCGCCGGAAGCGCGGGGAGTGGTCGCAAGAGTATTAGCGGCGGAGGCGT
GTACCGCAACCAGGGTATCCATCGGGGCGGCAGCGGGTCCGTGAGGAGCT
GCCGTTCCCAAGCGGCGGCGGCGGCGGGCGTCGGAGGGCTGTGGCGGGCG
GGCCGGAACAGCGGAGTGGAGCGGGGGACGCGGGTTGGTGGGGCGCGATC
GGCGGCGGTGGCCGCGTGGGGGGCGGCTCCGCCGAAGGCGACCGCAACGG
AGATGGCGGTGTCGCTGGGGCTAGCCCCGGTGACTCGGAGCGACGTTGCT
GCGGCAGCGGAGGACAGGAAGAGGAGGGCTGCGGCGTCATTGCGAGTGTC
GATGTCAGGTGCTGGAGCCGGGGGGGCAGAAGGTGTCGAAGGCTACGGAA
AAGCGGGCGGAGGAGGGGCGAGCGCGGCATCTTCTGCCGCACGGCGGCAG
GACGCGGCGACCTTTCAGTTCGGAAGCGGGAAGCCTTCGCCGGTGGAGCG
GCAACGGCGGCGGCAGCAGCAGCCCGCGACTTCGAGCGTGGAGGGTTCGA
GGCGCGACAGGCCGCCGACATCAGCGACGTGGCTTGATGGTGCAGCCAGC
GGCGACTGGCTGGCGGACAAATCGGGGGAAGGCGCAAGCAGCCACGCAGC
TGCGCAGGAAGCAGCAGGCGCGTTCGGAAGGCCCTCGACCACGGCACGTG
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGTGGGTTCCAGCAGGCGG
GTTGCAAGCGGCCATCGGTCGCCGTCCGGCAGCTTGGTCTCCGCCCGCCT
CGCGAGCCCCGAGCGCCTGCGCTCCGCGGGCCGGACGGCGCTAGACGTAC
GACGCCGGCTCGTGGCGGCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCG
GGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGAGCGAAGG
GCGCCGGAGGTCCGCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGTTCGCA
ACAGGGGCGGCCCGCCAGACGCCGAAGAGGAGAAGCTGGTTAACGCTCTC
TTCGACGAGGCCAGTTATCGCGCTATCCTTGGCAACGTGCCCGCCGCGAA
CGGATCCTCCCCGCTCGACGAGGAGCGGCTGGCGAACGCGCTCTTCGACG
AGGCCAGCTATCGCGCTATCCTCGGTGAGAGACCCACCCTGACCGGGTCC
CGCTCCCCCCCCAGGAGCCTCAGCGCCCCTCGCGCCGTGGCCCGAAGGCG
AGGCATGATCGGCTTTACGCCTCCCGCTGGGCCCGAGAGGGGAGGAAGAG
GGCCGGGTCGGTGGGACTGTCCCTCTACGCCAGTGGAGAGCGATGGACGA
TCTCGGGGGGACGGCTGGTTGCTGTCATCGGTGTCATCGCAGGTGTTTCG
GCCGAGAGAGGCGAGCGCAGCGGCGGCGGCGTTGGCGGAACCGTCCCAGG
GCATTGACGAGGACGAGGCCGCCGCGCGACGGTTCGCGAAGCAGGAACAG
GAGGCCCAGGCCAGAGAGGACGAGCTCCTAGCTCTGCGCCTGGCCGCCCG
AGAGGAGGCCGGCGCCGAGCGGCGGGCGTCCCGCCGCCGCGTCCAACGCC
GCAGCAACGCCTCCTCCGCGCGGAGGAACTCCATCCCGGGGTACATCAGC
CCCGACAGCAACCACCCGGCGGTAGCGTCGGCGGCGGGGGGCAACCTCAG
CGACGCCGTCCGCGCTCTGCAGTTCCAGGATATCGACGAGAACGACTTCG
AGACGCTGCTGGCGTTGGACGAAGCGGGCGGGGAGGGGGGGAGGTGTTGC
GCCGGGGGTAAGGGTCTCGCGGATGAGGCGATGGAGGCGGTGCTGCAGAC
CGGGAAGGCGGCCGGGGCAAGGCTGGAAGAGAGCTGTGCGGTCTGCATGG
AGGAGTTCGGGCTCGGCGACGAGATCTCTGTGCTCCCCTGCCTCCACGCC
TTCCACGGTGCGTGCATCCGCAAGTGGTTGCTTATGCGCAACCGTTGCCC
CACATGTCTTAAAGCGGTGATACCAGACAGTCCACAATAG
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protein sequence of Ec-27_005580.1

>Ec-27_005580.1 ID=Ec-27_005580.1|Name=Ec-27_005580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1030bp
MPPFPSCLKKERDHANSWIEGTAVVPDSPSVLRGGLCPFCDSDTLDTQVI
SVSHDPLFRRAGKMASVIAGSSSSSIDVTAGGRALRAAGEIGIALVELQR
HLDEEVAKATPASASAPAPAPGETVEAPAQATEVIKGDPLLHALVRCSRQ
LTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMY
HGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFP
PHSSAPVTSGSGGAADVAGAAGDGDGGAPAESRTERQPSSLATPLGNWTG
SPERIETRDAGRPVAAAAGAAAGAAAGAAAGAQVGAGAGAGAATGGGEGG
AAGSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAGVGGLWRA
GRNSGVERGTRVGGARSAAVAAWGAAPPKATATEMAVSLGLAPVTRSDVA
AAAEDRKRRAAASLRVSMSGAGAGGAEGVEGYGKAGGGGASAASSAARRQ
DAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAAS
GDWLADKSGEGASSHAAAQEAAGAFGRPSTTARGAAAAAAAAATVGSSRR
VASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSGSGSGSGS
GSGSGSGSGSGSGSSEGRRRSASAAAAAAAAVRNRGGPPDAEEEKLVNAL
FDEASYRAILGNVPAANGSSPLDEERLANALFDEASYRAILGERPTLTGS
RSPPRSLSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGR
SRGDGWLLSSVSSQVFRPREASAAAAALAEPSQGIDEDEAAARRFAKQEQ
EAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYIS
PDSNHPAVASAAGGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCC
AGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHA
FHGACIRKWLLMRNRCPTCLKAVIPDSPQ*
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mRNA from alignment at chr_27:5063214..5072519+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005580.1 ID=Ec-27_005580.1|Name=Ec-27_005580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9306bp|location=Sequence derived from alignment at chr_27:5063214..5072519+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGCCGTTCCCCAGCTGTTTGAAGAAGGAGCGAGACCACGCCAATAG
CTGGATAGAGGGGACAGCAGTAGTACCAGACAGCCCTAGCGTTTTGAGAG
GTGGGTTGTGCCCGTTTTGTGACTCTGACACGCTGGACACGCAGGTCATC
TCTGTGTCACACGACCCGCTCTTCAGGAGAGCTGGAAAAATGGCAAGTGT
CATCGCGGGAAGTAGCAGCAGCAGCATTGATGTTACAGCGGGCGGCAGGG
CTTTGCGGGCGGCGGGCGAGATTGGCATCGCGTTGGTAGAACTCCAGCGA
CATCTGGACGAGGTAAGTTAGAAACCAAAGTAATCGGTGGCTGGGGTTGT
TACTGTTTCAGGTGCCACATCTGCTGCGTCGAGGTGAACGAAAAGAGGGA
AAAAAGGCCGCGTTCCGATTTTTACCGGAGTTTGGGTCCGAAGCCCGGAC
CTGTTCATACCATAAGGCCACCTCCCTGCTGTGATTTGAATGCTCGTGAT
GTACTTGCGTGATGGGGGAGGAGGGAGGACCCTGGCCACCAGCGTTTGTG
CGCCCAGCAAGCACAGCGTGTCTCTGCCAGCAGTCAGTATAGCCCTCTAT
GATGATCCCGCAGGAACAGGAACGCGGCATTCAACACTCCGCCCGATCTC
AAGTCTGTGCGGTTGAACATCGCGAACAAAGGGTAGGGTGGCATGAGGAG
GCGTAAATAGTAAATAGTGGCGTGGCAGCTTGTTTTTGTGGTTCCCACAG
AGCAACTTGTTTCCGTTTTGCAGCTGCCTGTGTTTCAGTTGGTGGGCTAA
CCCTTACCGTAACCCTTACCGTTTTGGTCACCCTTACCGTTTTGGTCAAG
AGTTCGTGTACGCACATACGTACCCCAAGCAGGCTCTATCGTCGTCTCCC
CCGCATTTTTTTGTGGAATACTGCTCGACGCATTGTAAATATCCCACCTT
TTCCCGTCACTTCTCAAAGTCCACTGGCTGTGTACTTACCTATAGAGATG
CATTTGCATATCTGCCTTGTTCCTCTCCCAAAGGACAGGCTCCAATTCCA
GGCCCATGGAGAATAATTCCGCTGCGGTACTTGCCTTCCTTACTACAGCA
GTAATTGTGGCGAAGATAGCAGTCCTCTTTTTCGTCAACAAACTGTTCCG
TAAATTTCAACGCTGACATCTATGTAAGATCTTGAGCGCAGCGGATGTGA
TTGAGCCTACTTTTTCTTCCCATTGTATACAATGCATATGGAGAACAAAA
AGTTCGGTATCATCGCCGGGCCTTGATTCCTTCAATAATACGAACCTTTG
GATCTCTGCAGCTAGTCACATTATACAATAGGTGTTACTGCTGTAGTTGG
TTGGTGCGCACCAGGAATCTTTGTTGTCCACACACGGGAGGAGCGGTTTT
ACCCCGGTGAACAAACGTGCGCCGATTTCCTTGAGAACACCCCGCTTAGT
TCCTACGAAAGCTACGTACCATTATTCCATTCAAGGAATTTGTATTTTCC
AACACGGCGGTTCTTCATGATGCCAATCAAGTGTCCATGTGTTCGTATGT
GTGGCCCTCATGCACAAGAGTTTCGGGGATCTGGGGGTTTTGTGGGAGGG
TGTAGCTGGGCCAGCTGGAGACAGAGAGACAGACAGCAAGACAGAGACAG
ACAGCAAACAGAGAGACACACATTTGATTACATTTGATTATAGACGCAAG
ATATAAAGATCAAGTAACCAATCAAATCGAGCGATGCAACACTACAATAC
AGCAGTACCCACGTCCGTGTTCTTGTGTGTTGCCGTTGTTACGTGCCTGA
CTATTTTTTACAGCACGAACTGGACCAACATTCCCTCCCCTCAAAGGCCC
AAACCAAACCAAAACCCCAATTCGCCCTCCAAAGTGGAGCTTACCCTCAA
CGTCAATCCTACCCTGTTTCGTAACAGGTGCCCAGCACGGTGCTTTGAAT
CGGCGTATACATGTGGTAGCATTTCCTACATCAGCGATGCAATTCGGTTG
CCTTTGTGGCGCTTAGAGTTCCACACCACGGTGGGAGGCACCAAGGAGCA
GTGAACAGCAAGCACTCTTGCAATATACAAGGAGTAGGTTGCGATCCGCA
TCCAGCACGATTCTCGCATGACGAACCCCCGCGAGGGACGGCGCTCTGCA
TACATGGTATCCGCCCCTCTCTCCTGAAGGAAAGTGTGCCGTCCCTTTCA
GCATCCGACCTGGTCGTTGGCTGCTTCTTTTTTCGTGACGCAAACCAGGA
GGTTGCCAAGGCCACGCCGGCGTCGGCGTCGGCGCCGGCGCCGGCGCCAG
GTGAGACGGTCGAAGCCCCTGCGCAAGCCACGGAGGTGATCAAGGGGGAC
CCACTGCTGCATGCTCTCGTCCGCTGTAGCCGCCAGCTGACCAAGCTGAG
ACATTCGCTGCTCGCACAGGTGAGAAATGAGAAGATGGGACGTATGATAT
TGCGCCGTACTTTCCGCAGTTTTCGTGTTGTTTACCTTTTCCTTGTTCGA
CCGTTACTATCCTCTCGCACCAGCTTCTCCGAAATGCCTCCACCGTTACA
ACTGTTGACGGCCTCCCAGTATCTGCCAGTTTTATTCTCACCTCAGGTAT
GCCCAGCGATCTCCCCCTCGCGTTCAGGGGGCGGGAAAGTTGTCGTTTGT
TTCGCCCCGACTACATCTCTCTTTCTCTCTCTCTGTCCGAGGTCTCCCCC
TTGGACAGTGTGTTGGACAGGCACGTGGCGGTTTAGGCATCATGCGGAAC
AGGTAGCTTGTGCATGCACGTATTTATGTGAGCATGGGTTCAAAGTATGC
ATACGTAACAAGGACAGCTAGAATGCGAATCGCAGATTCTCTCCAGGTAC
ATCGGGCCCGTACTTTTCTCGAAACGCCGGTGACAACAAGCAGGCATCCT
CTATGTGCTCGTTGTTAATGTGTCCCTTGACCGCATGCTCTGTTGTCAGA
ACCCCCTCTCACATGCGAGGTGCTTCCTCGCCGCAAACAAGCTTGACGAG
CACGATCCACGGTGCCGCAGCGATATTCTAACCGTCACAAGAATTTTCCC
CATTAAATTCACCAACTACTACTGTTTCCCACCTTTGTTTCTCATGGAAA
AATACCAACTATTGGCGCTTTCTTGGTCTCTAACGGAAAACATATCATGT
GGTTTGTTGTTCGTCTCGAATTCAGGCGCACGGGCCCCATGAATCGTTGC
AGCACAGGGGGCGGCCCGTGGCGGTCACGAACGACGGGCGGAAGGCGCAG
TCCACTCTTCTGCATGCGCAGCAAATCGCCGACGACATGTATCACGGATC
GCTGGTGAGGTTTATGAATATTTTTCTTCACCGCCGGCGGCGGAGGCGTT
ATGCCATGTCGCACCGGAAGTCCGTGTACATTACGTCGTGTTCGGCGTAG
TAGTCGTTCCGTGAAGTGGCCATGCACTGGCGCAAGCGCAGTGGCAGAGG
CTGGGGGTGTCACCTGACGACGGCATTGTGATCACCCAAGACTCGCCGTT
ATTGTCTTCCGTAGAATATTCGGGACTCGGGTACGCCCTTTGGGGCGCTT
CTGTCCGTCAGAAGGTGATGCCCTAGAACCTCACGTACTTGACGGTGCAG
GAGAAGCTCGCGAAGCAGTGATTCACGTTGACTCCGTTCTGTTACAAATT
GACGTCGGACGCGTAAGTCAGATACTGGGTGGGTTTACACCGAACATCGC
AAACATATAATAGAAGAGCTCCTTCGGCAGCACCTGTCTTACTGGAGTTC
TCGGCGGGAGAATGGTTGAGCAGTTCTTCCGTCAAGCGCACTCACGAAAG
ATGCACGTTTTCGTTTCAGCAATACTCGATACGACGACGCTTGTAGCGGG
GTCGCTGACTTGGCCCGGAATAGGACAATCCCCATCAAGCCAAACAGGGG
ACGGACCACATAAACCACCGGGGCTGTTTGGTCGTCCCGCTATTGGTCCT
GACGAGTTGAAGGTCTCTGGGCATAGTCCCTTGAATGCGGGTTCTTGGAA
AATGTCGTGCATCGTGTCAACCAGAGGTGTGCGCCCTTTCAGCCTTGACA
CCAGTATCGTAGTAGGTGGAAACAACATCGGTAGAGAATCGTACCTCTCT
TGTGTGTCTCTCAGCCTGGAAAGCGCATCCAGTATTGGTGGTGGCGGGAT
TCCCTCTCACTAGATCGAAGAAGTCGCCTCCCAATCTCCCACACCTGTTT
CTCTGATGACCCGATGAGTGCCCTCCCGCCGCCCTTGATATGGGTTGGCG
TTCCTAGCTTTTCTGACAGTGCTGCTACCCCCCCCCCCCCCCCCCCCCGG
TGTTTGCCATCCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAA
ACAAGCCGCCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTCCGTCGCTT
GGCAACGACGTTGTAAACAAGCCAATTCACTTCGTGAACTCGGCAACCAG
GTTACCGTTTTTTTTTTTACCTCTGTTTTTTTTATTTGGCGGTAACCATA
GTGGTGGTCGAGTAGATCATGTTGTGCGGGGTGGAGAAACCTCACTCCGC
GCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCATGCATCCTCG
AGGCAGCTACACAGTGCTTATAACTGTCTCTGGAAGTGAACGCACCAGAA
ACTAAATTAAGTCATACGCAGCTGTCATCCGTACGCAGGAAGTAAGCACA
AGATGCCGAACACCCTTACCAGGATGCAGCTCACCCTTCATGCGACTCAC
CGAATACCTCACGGTGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGT
GAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGG
TCAAACGACTACGGCATGCACGACGACTATGAGTACCCCCCCCCCCCCCC
CCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCCCCCCTTTTTGGGGGGGGGGGGGTAAATGTTAAAAAA
TTCCGGGGCGCCCCGGGGGTTTTGGTTCCCCCCCCCCCCCCCCCCCCCCC
CCCCATCCGGCGCCCGCCCCCTAGGCACAGCTGAACGACCCCTTTAGCGC
TGAGACCGGTTACCACTCCAAGGTGCTCGACACGGTCCAGTCCTGCGACA
GGGCCAACGCGGTGACGGCGTCGGCCCTAACTCTAGTCATCAGCGCGCTC
TCGGGGTTCCCGCCGCACTCCTCCGCGCCCGTGACAAGCGGTAGCGGAGG
CGCCGCTGACGTCGCCGGTGCTGCCGGCGATGGCGACGGTGGGGCCCCCG
CGGAATCACGAACGGAGAGACAGCCGTCTTCCCTGGCAACCCCTCTCGGA
AATTGGACTGGTAGTCCCGAACGAATCGAAACCCGCGATGCCGGGAGGCC
GGTAGCGGCGGCAGCGGGAGCGGCAGCGGGAGCGGCAGCGGGAGCGGCAG
CGGGAGCGCAAGTGGGAGCGGGAGCGGGAGCGGGAGCAGCAACGGGAGGA
GGAGAGGGAGGAGCCGCCGGAAGCGCGGGGAGTGGTCGCAAGAGTATTAG
CGGCGGAGGCGTGTACCGCAACCAGGGTATCCATCGGGGCGGCAGCGGGT
CCGTGAGGAGCTGCCGTTCCCAAGCGGCGGCGGCGGCGGGCGTCGGAGGG
CTGTGGCGGGCGGGCCGGAACAGCGGAGTGGAGCGGGGGACGCGGGTTGG
TGGGGCGCGATCGGCGGCGGTGGCCGCGTGGGGGGCGGCTCCGCCGAAGG
CGACCGCAACGGAGATGGCGGTGTCGCTGGGGCTAGCCCCGGTGACTCGG
AGCGACGTTGCTGCGGCAGCGGAGGACAGGAAGAGGAGGGCTGCGGCGTC
ATTGCGAGTGTCGATGTCAGGTGCTGGAGCCGGGGGGGCAGAAGGTGTCG
AAGGCTACGGAAAAGCGGGCGGAGGAGGGGCGAGCGCGGCATCTTCTGCC
GCACGGCGGCAGGACGCGGCGACCTTTCAGTTCGGAAGCGGGAAGCCTTC
GCCGGTGGAGCGGCAACGGCGGCGGCAGCAGCAGCCCGCGACTTCGAGCG
TGGAGGGTTCGAGGCGCGACAGGCCGCCGACATCAGCGACGTGGCTTGAT
GGTGCAGCCAGCGGCGACTGGCTGGCGGACAAATCGGGGGAAGGCGCAAG
CAGCCACGCAGCTGCGCAGGAAGCAGCAGGCGCGTTCGGAAGGCCCTCGA
CCACGGCACGTGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGTGGGT
TCCAGCAGGCGGGTTGCAAGCGGCCATCGGTCGCCGTCCGGCAGCTTGGT
CTCCGCCCGCCTCGCGAGCCCCGAGCGCCTGCGCTCCGCGGGCCGGACGG
CGCTAGACGTACGACGCCGGCTCGTGGCGGCGGGCTCGGGCTCGGGCTCG
GGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGG
CTCGAGCGAAGGGCGCCGGAGGTCCGCCTCGGCGGCGGCGGCGGCGGCGG
CGGCGGTTCGCAACAGGGGCGGCCCGCCAGACGCCGAAGAGGAGAAGCTG
GTTAACGCTCTCTTCGACGAGGCCAGTTATCGCGCTATCCTTGGCAACGT
GCCCGCCGCGAACGGATCCTCCCCGCTCGACGAGGAGCGGCTGGCGAACG
CGCTCTTCGACGAGGCCAGCTATCGCGCTATCCTCGGTGAGAGACCCACC
CTGACCGGGTCCCGCTCCCCCCCCAGGAGCCTCAGCGCCCCTCGCGCCGT
GGCCCGAAGGCGAGGCATGATCGGCTTTACGCCTCCCGCTGGGCCCGAGA
GGGGAGGAAGAGGGCCGGGTCGGTGGGACTGTCCCTCTACGCCAGTGGAG
AGCGATGGACGATCTCGGGGGGACGGCTGGTTGCTGTCATCGGTGTCATC
GCAGGTGTTTCGGCCGAGAGAGGCGAGCGCAGCGGCGGCGGCGTTGGCGG
AACCGTCCCAGGGCATTGACGAGGACGAGGTGGGACAAGCGAAGGGCGTG
TGTTTGCATGCTTGCGCGGTGGTGCAGGTTGCGTAGGCGTTGCCACTCGA
CGCCTCTGGATGCTCGGTCGTGGTGGTAGATATGTGCGTGAGCTGACGTG
CACGGAAGTGTTTTTTGCTTGGTAATCCCTCGTTCTCCATTTCATGGATC
TCCCGTCGAGTACCAACTTCCGGCAACTTCGGCAGCGTTTTTGCTGAATC
CGCGTTAGTGCACCGGAACATCACCGCCCTCCTTCCAAGTACTCCATCCG
ATCAACCATGAACATTATCCCCCACGGGCTGGCTTCCCACGGGCGCCTTT
GTTGCCTGGGTCTTCTTGCAAACTTGCCAAGTAGCGCACACGGCCATGAA
TCTCGAGGACGCGTGGTCAATCGTCTAAGGCATGCAAAACATCAGTACGC
CCCCCCTCCCCCGCAGGCCGCCGCGCGACGGTTCGCGAAGCAGGAACAGG
AGGCCCAGGCCAGAGAGGACGAGCTCCTAGCTCTGCGCCTGGCCGCCCGA
GAGGAGGCCGGCGCCGAGCGGCGGGCGTCCCGCCGCCGCGTCCAACGCCG
CAGCAACGCCTCCTCCGCGCGGAGGAACTCCATCCCGGGGTACATCAGCC
CCGACAGCAACCACCCGGCGGTAGCGTCGGCGGCGGGGGGCAACCTCAGC
GACGCCGTCCGCGCTCTGCAGTTCCAGGATATCGACGAGAACGACTTCGA
GACGCTGCTGGCGTTGGACGAAGCGGGCGGGGAGGGGGGGAGGTGTTGCG
CCGGGGGTAAGGGTCTCGCGGATGAGGCGATGGAGGCGGTGCTGCAGACC
GGGAAGGCGGCCGGGGCAAGGCTGGAAGAGAGCTGTGCGGTCTGCATGGA
GGAGTTCGGGCTCGGCGACGAGGTGCGTGTCTTCTGCGGGCGTGTTTTTT
GTGTTTTTGTTGTGGTTGGCACTGTCTACTGCGGTAACCTGGTGAACAAT
GAAAAGACTTGCGTCTTAGTGCGGTTGAAAGCTCATCATGCTTGTATTTA
TGGCCATGATCTGGGACCCCGTGAGAAGGCGTCAATGGGAGCGCAATCGC
GCGCGCGCGTGTTGAGTTTTGACTAGCATTGACCGCGCTACAGACGCTTG
TGAAGGCTATTTATATGATCTGGGACGCCATGAGGGGTGTTGGTGTGTGT
GTGAGAGACGCGCGTGCATTTGCTCGGCGTGCGTGGTCTCCATCAGTCTC
GTGGTGGTGTGATGCGACAAATTTACGTGCCGAATATGCGTTTGTTCTCA
TCAAGTCCAGGAATTAGGTCTGCTCATTGTAGGGTATTCATTGGTCCAGT
CGTGTATTTCCGACACACGCATCTTTTTTGTTACCTCTGTTGGGACTCTG
CACTGTCCGTGACACCATTAGCCTTTTGCTTTATTTCGGCAAGGCCAAAA
GCAGAAAGATGGAACGAACTCGAAAGAGCCTCACAGAGGCTGGCCCGATT
TAGTGACCCCTAGTGTCAGGAGGGAATATGGTCGCCATGCAAGGCATGTC
GCTAAACACGCGGTCGCGACCCGTTTGTATTCCGCGAAGATGCGTGTAGT
CGTTGTGCGAGCTCACGCCAAGACCGATGTTTCCAAGATCGATTTTCCCG
GGCCGAGGGAGTGCGGAAACCTCCTGATTTGGGGCGAAGCTTACGAGATG
ACCCCTTTCGACACTTATTCCTGGTTGTGGAGAACTTGAGCTCTTACGGT
CGCGGTCTAGCGAGTGTGCAATGGTTCTCGCACCTGTTGGGTAGGGGGGC
CATCACGGTCTGTACTACTACAACAGCCGCACGGTTTCCGCGCGCCCATC
AAGTCTGACGGCGAGCACGTATGACGTGATCGTGCAGTTGCGTGTGCGTG
CCGACCCGTTGTGTGGCGGCTAGTACTCGAGCGTGCTGTGGTGTCCACGT
GCGCCCTTCTTGCAGCCTGTACCAACCCACCCGCATCCTTCCGTGCCATA
CCCGTCCGCTGCCCATGCTACTGTCGTCGCTGCTGCTGCCTCGGCCGCCC
CTGGTCTATTGCCGCTGGCCGATGCTCTTGGCTGTCACCGGGTCGCGCGG
CGTCTGGGAACCCTGGATTTGGCGATGCTCCCGGTTGTCGGAAATGCGCA
TGAAATCCGCACCTCCATGTTTTTGCTGGCCGGGGACAGATCTCTGTGCT
CCCCTGCCTCCACGCCTTCCACGGTGCGTGCATCCGCAAGTGGTTGCTTA
TGCGCAACCGTTGCCCCACATGTCTTAAAGCGGTGATACCAGACAGTCCA
CAATAG
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Coding sequence (CDS) from alignment at chr_27:5063214..5072519+

>Ec-27_005580.1 ID=Ec-27_005580.1|Name=Ec-27_005580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3090bp|location=Sequence derived from alignment at chr_27:5063214..5072519+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGCCGTTCCCCAGCTGTTTGAAGAAGGAGCGAGACCACGCCAATAG
CTGGATAGAGGGGACAGCAGTAGTACCAGACAGCCCTAGCGTTTTGAGAG
GTGGGTTGTGCCCGTTTTGTGACTCTGACACGCTGGACACGCAGGTCATC
TCTGTGTCACACGACCCGCTCTTCAGGAGAGCTGGAAAAATGGCAAGTGT
CATCGCGGGAAGTAGCAGCAGCAGCATTGATGTTACAGCGGGCGGCAGGG
CTTTGCGGGCGGCGGGCGAGATTGGCATCGCGTTGGTAGAACTCCAGCGA
CATCTGGACGAGGAGGTTGCCAAGGCCACGCCGGCGTCGGCGTCGGCGCC
GGCGCCGGCGCCAGGTGAGACGGTCGAAGCCCCTGCGCAAGCCACGGAGG
TGATCAAGGGGGACCCACTGCTGCATGCTCTCGTCCGCTGTAGCCGCCAG
CTGACCAAGCTGAGACATTCGCTGCTCGCACAGGCGCACGGGCCCCATGA
ATCGTTGCAGCACAGGGGGCGGCCCGTGGCGGTCACGAACGACGGGCGGA
AGGCGCAGTCCACTCTTCTGCATGCGCAGCAAATCGCCGACGACATGTAT
CACGGATCGCTGGCACAGCTGAACGACCCCTTTAGCGCTGAGACCGGTTA
CCACTCCAAGGTGCTCGACACGGTCCAGTCCTGCGACAGGGCCAACGCGG
TGACGGCGTCGGCCCTAACTCTAGTCATCAGCGCGCTCTCGGGGTTCCCG
CCGCACTCCTCCGCGCCCGTGACAAGCGGTAGCGGAGGCGCCGCTGACGT
CGCCGGTGCTGCCGGCGATGGCGACGGTGGGGCCCCCGCGGAATCACGAA
CGGAGAGACAGCCGTCTTCCCTGGCAACCCCTCTCGGAAATTGGACTGGT
AGTCCCGAACGAATCGAAACCCGCGATGCCGGGAGGCCGGTAGCGGCGGC
AGCGGGAGCGGCAGCGGGAGCGGCAGCGGGAGCGGCAGCGGGAGCGCAAG
TGGGAGCGGGAGCGGGAGCGGGAGCAGCAACGGGAGGAGGAGAGGGAGGA
GCCGCCGGAAGCGCGGGGAGTGGTCGCAAGAGTATTAGCGGCGGAGGCGT
GTACCGCAACCAGGGTATCCATCGGGGCGGCAGCGGGTCCGTGAGGAGCT
GCCGTTCCCAAGCGGCGGCGGCGGCGGGCGTCGGAGGGCTGTGGCGGGCG
GGCCGGAACAGCGGAGTGGAGCGGGGGACGCGGGTTGGTGGGGCGCGATC
GGCGGCGGTGGCCGCGTGGGGGGCGGCTCCGCCGAAGGCGACCGCAACGG
AGATGGCGGTGTCGCTGGGGCTAGCCCCGGTGACTCGGAGCGACGTTGCT
GCGGCAGCGGAGGACAGGAAGAGGAGGGCTGCGGCGTCATTGCGAGTGTC
GATGTCAGGTGCTGGAGCCGGGGGGGCAGAAGGTGTCGAAGGCTACGGAA
AAGCGGGCGGAGGAGGGGCGAGCGCGGCATCTTCTGCCGCACGGCGGCAG
GACGCGGCGACCTTTCAGTTCGGAAGCGGGAAGCCTTCGCCGGTGGAGCG
GCAACGGCGGCGGCAGCAGCAGCCCGCGACTTCGAGCGTGGAGGGTTCGA
GGCGCGACAGGCCGCCGACATCAGCGACGTGGCTTGATGGTGCAGCCAGC
GGCGACTGGCTGGCGGACAAATCGGGGGAAGGCGCAAGCAGCCACGCAGC
TGCGCAGGAAGCAGCAGGCGCGTTCGGAAGGCCCTCGACCACGGCACGTG
GGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGTGGGTTCCAGCAGGCGG
GTTGCAAGCGGCCATCGGTCGCCGTCCGGCAGCTTGGTCTCCGCCCGCCT
CGCGAGCCCCGAGCGCCTGCGCTCCGCGGGCCGGACGGCGCTAGACGTAC
GACGCCGGCTCGTGGCGGCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCG
GGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGAGCGAAGG
GCGCCGGAGGTCCGCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGTTCGCA
ACAGGGGCGGCCCGCCAGACGCCGAAGAGGAGAAGCTGGTTAACGCTCTC
TTCGACGAGGCCAGTTATCGCGCTATCCTTGGCAACGTGCCCGCCGCGAA
CGGATCCTCCCCGCTCGACGAGGAGCGGCTGGCGAACGCGCTCTTCGACG
AGGCCAGCTATCGCGCTATCCTCGGTGAGAGACCCACCCTGACCGGGTCC
CGCTCCCCCCCCAGGAGCCTCAGCGCCCCTCGCGCCGTGGCCCGAAGGCG
AGGCATGATCGGCTTTACGCCTCCCGCTGGGCCCGAGAGGGGAGGAAGAG
GGCCGGGTCGGTGGGACTGTCCCTCTACGCCAGTGGAGAGCGATGGACGA
TCTCGGGGGGACGGCTGGTTGCTGTCATCGGTGTCATCGCAGGTGTTTCG
GCCGAGAGAGGCGAGCGCAGCGGCGGCGGCGTTGGCGGAACCGTCCCAGG
GCATTGACGAGGACGAGGCCGCCGCGCGACGGTTCGCGAAGCAGGAACAG
GAGGCCCAGGCCAGAGAGGACGAGCTCCTAGCTCTGCGCCTGGCCGCCCG
AGAGGAGGCCGGCGCCGAGCGGCGGGCGTCCCGCCGCCGCGTCCAACGCC
GCAGCAACGCCTCCTCCGCGCGGAGGAACTCCATCCCGGGGTACATCAGC
CCCGACAGCAACCACCCGGCGGTAGCGTCGGCGGCGGGGGGCAACCTCAG
CGACGCCGTCCGCGCTCTGCAGTTCCAGGATATCGACGAGAACGACTTCG
AGACGCTGCTGGCGTTGGACGAAGCGGGCGGGGAGGGGGGGAGGTGTTGC
GCCGGGGGTAAGGGTCTCGCGGATGAGGCGATGGAGGCGGTGCTGCAGAC
CGGGAAGGCGGCCGGGGCAAGGCTGGAAGAGAGCTGTGCGGTCTGCATGG
AGGAGTTCGGGCTCGGCGACGAGATCTCTGTGCTCCCCTGCCTCCACGCC
TTCCACGGTGCGTGCATCCGCAAGTGGTTGCTTATGCGCAACCGTTGCCC
CACATGTCTTAAAGCGGTGATACCAGACAGTCCACAATAG
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Synonyms
The feature 'Ec-27_005580.1' has the following synonyms
Synonym
Esi0000_0182
Esi_0000_0182