Ec-27_003260.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_003260.1
Unique NameEc-27_003260.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1004
Homology
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A6H5KPI6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPI6_9PHAE)

HSP 1 Score: 957 bits (2475), Expect = 0.000e+0
Identity = 593/647 (91.65%), Postives = 604/647 (93.35%), Query Frame = 1 
Query: 1099 MPAAAKNSGDREVPRFLRPVLVLLTLSLLAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LFGPAAYAAGGVQLPESVVDDIFERADKDKNGVIGDEEIQYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCVPGRTSWFWSPGGGXXXXXXXXXXEASLGGLVVATAVSVAVAFCLRALSXXXXXXXX--IQRGASGDVVGSRSGXXXXXXXXXXXXXXXXXXX--KMRQQPEAAITGTARSSAVAAAAVSDRDGVKGRGGASSPTSVHSNGSGWGDRERAEPRTKMLGSGSTRPASSRRTKERLRRASSDVSPPRGXXXXXXXXXXXXXXXXXLGRAGVSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEWKWYRRGKHTCCKCHEQFCDRKECGSRSHAFGACPVGGTCMCSSCMQLGGRRSSSLSGSMSFDH 3009
            MPAA KNSGDREVPRFLRPV+VLLTLSLLAIGG XXXXXXXXXXXXXXXXXXXXXXXXXXX      LFGPAAYAAGGVQLPE+VVDDIFE ADKDKNGVIGDEEIQYLVERAGGS LDDASEIEAGVASVIKNLDRNAD ALSRSDLN YWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDL ITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGA SLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGG FFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDC PGRTSWFWSPGGGXXXXXXXXXX   +GGLVVATAV+VAVA CLRALSXXXXXXXX  ++RGASGDVVGS   XXXXXXXXXXXXXXXX     +MRQQP AAITGTA +SA+AAAAVSDRDG K RGGASSP SVHSNGSGWGDRERAEPRTKMLGSGSTRP SSRRTKERLRRASSDVSPP  XXXXXXXXXXXXXXXXXL RAGVSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEW+WYRRGKHTCCKCHEQFCDRKECGS SHAFGACPVGGTCMCSSC+QLGGRRS  L GSMSFDH
Sbjct:    1 MPAATKNSGDREVPRFLRPVMVLLTLSLLAIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGPAAYAAGGVQLPEAVVDDIFEHADKDKNGVIGDEEIQYLVERAGGSRLDDASEIEAGVASVIKNLDRNADHALSRSDLNVYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAVSLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGGTFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCAPGRTSWFWSPGGGXXXXXXXXXXXXXVGGLVVATAVTVAVASCLRALSXXXXXXXXXXVRRGASGDVVGSXXXXXXXXXXXXXXXXXXXRRESERMRQQPGAAITGTAGNSAMAAAAVSDRDGDKSRGGASSPKSVHSNGSGWGDRERAEPRTKMLGSGSTRPVSSRRTKERLRRASSDVSPP-XXXXXXXXXXXXXXXXXXLARAGVSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEWRWYRRGKHTCCKCHEQFCDRKECGSHSHAFGACPVGGTCMCSSCLQLGGRRSFPLLGSMSFDH 646
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S4V3N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3N0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.010e-38
Identity = 92/275 (33.45%), Postives = 142/275 (51.64%), Query Frame = 1 
Query: 1348 FERADKDKNGVIGDEEI-QYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLG---AEGER-----DGG-----------------------WVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVAS 2076
            F   D+D +G++   E+  +L E  GG+  D  +E+E GV  +++ LDRN D  L +SD+  YW  L +LL  DE A WV+HA QLP+ + + F  NMVTGYDFPEL    G  +  +L I R +F++ +VR +  ++ G+G  P  P+ ++    +C   ++ WD++    +   FPVH + ++R  +G    +G R     D G                       W T+  G    F D+GL+ G  Y Y +QAWN++G S    VD+  S
Sbjct:  141 FSSVDEDGDGMLEPPEVANFLRESIGGTAFDTQAEVETGVNKIMEKLDRNHDLGLDKSDVEAYWKHLESLLNADEVADWVVHAVQLPEYLGNIFRENMVTGYDFPELVENDGEAIRTELGIERSSFRKKIVRHIHARMLGIGSTPTIPSEIKHKLESCSTVNISWDRS----TAEGFPVHSYRIKRRAVGLHDGDGPRKVITLDAGPGTHHMVNSPSNVQSLSLPLASDWATIYVGGESEFVDSGLELGHNYVYRVQAWNSVGRSAWATVDISDS 411
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S4R8Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8Z4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.180e-37
Identity = 94/274 (34.31%), Postives = 142/274 (51.82%), Query Frame = 1 
Query: 1348 FERADKDKNGVIGDEEI-QYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGG---------------------------------WVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDV 2067
            F   D D +G++  +E+  +L E  GGS  D  +E+EAGV  V++ LDRN D  L +SD++ +W +L +LL  DE A WV++A QLP+ + + F  N VTGYDFPEL    G  ++ +L I + +F+R L+  ++ +L G+G  P  P+ ++    +    S  WD++    S  SFPVH + ++R  +G   + DG                                  WVTV  G    F D+GL+ G  Y Y  QAWN++G S  V VD+
Sbjct:  117 FRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTPTVPSKMKYKLESSSTVSFSWDKS----SAESFPVHIYRIQRRDVGLHHDGDGTRKVVNHLAARPRTHQTADPPSTVQRLSSPSTSEWVTVYVGGECEFVDSGLELGHNYVYRAQAWNSIGRSDWVTVDI 386
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: B8C5W8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W8_THAPS)

HSP 1 Score: 148 bits (374), Expect = 1.120e-32
Identity = 88/267 (32.96%), Postives = 139/267 (52.06%), Query Frame = 1 
Query: 1339 DDIFERADKDKNGVIGDEEI-QYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALL-----GAEGERD-----------------GGWVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVV 2070
            D  F   D D +G++  EE+  +L ++ GGS  D  S ++  V++V+K LD+N D  +  SD+  YW +L +LLT +E ++WV++A QLP+ V   F+ N +TGYDFPE+    G +L  +L I + +F+  +VR MQ ++ G+G  P  P         C A S  W+++    S   FPVH + ++R  +     G+  E +                   W TV  G    F D+ ++ G  Y Y +QAWN++G SG   VD+ 
Sbjct:   81 DTFFHSLDSDHDGILEPEEVASFLKDQIGGSQFDTQSAVDKEVSTVMKRLDQNHD-GIEMSDVLDYWMQLESLLTAEEVSEWVVYAVQLPKTVGKIFLENGITGYDFPEIVENGGEVLLNELGIDKTSFRNKIVRQMQARMLGIGSIPDKPTQFYYKLDNCKAVSFTWERS----SARVFPVHSYRIQRRAINLFENGSTNENNMPIANDFSMVTYPPVSTSDWKTVYVGGENEFVDSSVETGHNYIYRIQAWNSVGRSGWEVVDLT 342
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S2KT34_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KT34_9STRA)

HSP 1 Score: 144 bits (364), Expect = 7.740e-32
Identity = 93/297 (31.31%), Postives = 144/297 (48.48%), Query Frame = 1 
Query: 1360 DKDKNGVIGDEEIQYLVERA-GGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKH-VLRRAL-------------------------LGAEGE------------------------RDGGWVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSE--DCV 2091
            D +++GV+   E+   +  + GGS  D  +E+   V  ++  LD+N D+ L  SD+ ++W +L ++LTVDE   WVL+A QLP++VA+ FV + VTGYDFPEL    G  +  +L I + +F++ L+RS+  KL G+G  P  P   +    +C   +L W +     + +SFPVH + V RRA+                         +  EG+                            WVTV  G   +F D+ L+    Y Y LQAWN +GHS     D+ +S +  DC+
Sbjct:  127 DTNRDGVVKPNEMANFIRNSIGGSAFDTETEVNFEVERIMGELDQNQDENLDLSDVFSHWKQLESVLTVDEVKDWVLYAVQLPEKVANTFVEHSVTGYDFPELIENDGDAMRVELGIEKQSFRKKLLRSIHAKLLGIGSVPTTPPSFKHNLESCSVVNLTWKKP----AAISFPVHSYRVQRRAVSQRRPTRNNLDFCEEKRNEIDAVQDIFGEGKCNTYLSDKEAHEQNDKFISKEYSASSADWVTVYIGVDTSFLDSNLEHDHKYVYRLQAWNPIGHSPWATRDIYSSLKRSDCL 419
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S3V9U2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9U2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.110e-31
Identity = 80/194 (41.24%), Postives = 113/194 (58.25%), Query Frame = 1 
Query: 1348 FERADKDKNGVIGDEE-IQYLVERAGGSLLDD-ASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEG 1923
            F   D+D +G I   E I +++E  GGS  DD  +E++  V  ++KNLD N D  L   D+ +YW++L +LLTVDE A WV+HA QLP  + D   +  VTGYDFPEL    G  L  +L IT  +F+  ++R MQ ++ G+G  P  P+G+ AT  +C A  L WD+T        FPVHK+ + R  +G  G
Sbjct:  221 FNFVDRDGDGKIRRPELIDFVMENIGGSDFDDEVNEVKPEVDRMMKNLDLNNDDGLDTGDVTSYWEKLESLLTVDEVADWVVHAVQLPSYIGDIVRDKHVTGYDFPELVEDNGKALVDELHITEKSFRTKIIRLMQARMLGIGSVPRKPSGIVATVESCEAIKLTWDRTLADG----FPVHKYRVMRRTVGGGG 410
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S1B4T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4T7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.240e-31
Identity = 90/293 (30.72%), Postives = 145/293 (49.49%), Query Frame = 1 
Query: 1348 FERADKDKNGVIGDEEIQYLVERA-GGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKH-VLRRALL-----------GAEGER-------------------DGGWVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSG--SVEVDVVASSEDCVPGRTSWFWSPG 2124
            F   D D +  I  EE+   V +  GG+  D   EI++ V ++ K+LD N D+ +S  D+  +W++L  LLT DE A+WV +A QLP+ VA+ F +N VTG+DF EL    G  LE+ L I +  F++ L+R ++ ++ G+G  P +   ++ +  +C + S  WD+         FPVH + + RRA++           GA+ +                    D  W  V  G    F D GL+ G +Y Y +QAWNA+G S     ++  +     C   ++   ++PG
Sbjct:   57 FSAVDTDHDDTIDLEELSNFVGKVIGGTQFDTPLEIQSEVNAMFKSLDLNHDKRISFKDVKEHWNKLECLLTADEVAEWVKYAVQLPENVANTFRDNAVTGFDFSELVVNNGEALERYLGIEKELFRKKLLRLIKARMLGVGTVPDSVLNIKHSVDSCSSVSFTWDKPIARG----FPVHSYRIQRRAIMKVPRFIAVDSTGAQNKSVDLDATPNESTVVAQIKLSDENWADVFIGADTEFVDTGLELGYSYIYRIQAWNAVGRSPWRIQDISSLRKKRSCFKPQSKLLFAPG 345
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: D8LHW7_ECTSI (FYVE zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW7_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.600e-29
Identity = 89/246 (36.18%), Postives = 132/246 (53.66%), Query Frame = 1 
Query: 1312 GVQLP-ESVVDDIFERADKDKNGVIGDEEIQYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHS 2046
            GV+ P +S     F   D++ +GV+ + EI+  V   GGS LDD SEI  GV++V+  LD ++D+ +   +L+++ +RLG +LTV+EAA WV HA QLP+EVA+AF +N ++ YDFPEL    GA L  DL I R  F++ +V++++ +L G+G+EP  P                                  VL        G+ D    +V       F D+GL PG  Y Y ++AWN +GHS
Sbjct:  132 GVRKPRQSETATFFNSLDENSDGVLAENEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSDKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEPPLP----------------------------------VLHPPSYLGGGKADD-VASVSGSSSFVFVDSGLSPGKTYVYRVRAWNLIGHS 340
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A7S4R7C1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7C1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.940e-28
Identity = 84/275 (30.55%), Postives = 135/275 (49.09%), Query Frame = 1 
Query: 1348 FERADKDKNGVIGDEEIQYLVERA-GGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNT-YWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGG---------------------------------WVTVMAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDV 2067
            F   D+D +G++  +++++ + ++ GG   D  +E+EAGV  V++ LD               +W +L +LL  DE A WV++A QLP+ + + F  N VTGYDFPEL    G  ++ +L I + +F+R L+  ++ +L G+G  P  P+ ++    +    S  WD++    S  SFPVH + ++R  +G   + DG                                  WVTV  G    F D+GL+ G  Y Y  QAWN++G S  V VD+
Sbjct:  244 FRSVDQDDDGMLDPQDLEHFLWKSIGGPAFDTHAEVEAGVNKVMEKLDXXXXXXXXXXXXXXXFWVQLESLLNADEVADWVIYAVQLPEYMGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTPTVPSKMKYKLESSSTVSFSWDKS----SAESFPVHIYRIQRRDVGLHHDGDGTRKVVNHLAARPRTHQTADPPSTVQRLSSPSTSEWVTVYVGGECEFVDSGLELGHNYVYRAQAWNSIGRSDWVTVDI 514
[Close]
BLAST of Ec-27_003260.1 vs. uniprot
Match: A0A6H5L898_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L898_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 5.420e-26
Identity = 73/177 (41.24%), Postives = 114/177 (64.41%), Query Frame = 1 
Query: 1312 GVQLP-ESVVDDIFERADKDKNGVIGDEEIQYLVERAGGSLLDDASEIEAGVASVIKNLDRNADQALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLRATSSACGAASLEW 1839
            GV+ P +S     F   D++ +GV+ ++EI+  V   GGS LDD SEI  GV++V+  LD ++++ +   +L+++ +RLG +LTV+EAA WV HA QLP+EVA+AF +N ++ YDFPEL    GA L  DL I R  F++ +V++++ +L G+G+EP  P     +    G A +EW
Sbjct:  152 GVRKPRQSEAATFFNSLDENSDGVLAEDEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSEKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEPPLPVLHPPSYLGGGKARIEW 326
The following BLAST results are available for this feature:
BLAST of Ec-27_003260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KPI6_9PHAE0.000e+091.65EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S4V3N0_9STRA2.010e-3833.45Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R8Z4_9STRA5.180e-3734.31Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B8C5W8_THAPS1.120e-3232.96Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2KT34_9STRA7.740e-3231.31Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3V9U2_9STRA1.110e-3141.24Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S1B4T7_9STRA2.240e-3130.72Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
D8LHW7_ECTSI2.600e-2936.18FYVE zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A7S4R7C1_9STRA1.940e-2830.55Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A6H5L898_9PHAE5.420e-2641.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:2873963..2879854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score924.1
Seed ortholog evalue5.6e-266
Seed eggNOG ortholog2880.D8LBP1
Length3012
Hectar predicted targeting categoryother localisation
Gene idEc-27_003260.1
EggNOG free text desc.Fibronectin type 3 domain
EggNOG OGs2CXRS@1,2RZA2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003260Ec-27_003260Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 2873963..2879854 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003260.1Ec-27_003260.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 2873963..2879854 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003260.1.6Ec-27_003260.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2873963..2874149 -
Ec-27_003260.1.5Ec-27_003260.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2875235..2876382 -
Ec-27_003260.1.4Ec-27_003260.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2876933..2877063 -
Ec-27_003260.1.3Ec-27_003260.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2877603..2877744 -
Ec-27_003260.1.2Ec-27_003260.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2878110..2879472 -
Ec-27_003260.1.1Ec-27_003260.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2879814..2879854 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003260.1CDS:Ec-27_003260.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 2873963..2874149 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_003260.1 ID=Ec-27_003260.1|Name=Ec-27_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1004bp
MWNRKSAVATKLEGEQQQHQRCDRSGSLVEAAGGGKECRRSQAVQVSPEH
LLKPQTASSSSTAAAAAVGNFEASSVEGSRYSLAAGEVGGAWSGSLAGAG
EGTAVACAVGEGGARGDGNRRLLRWRSIRRLQQYKSSGDVSGKSTVNGGG
KGTAACGSSTQSPSRSPSRLSLGRLVRGPATASNTTGTAVVAPAAAPAAT
TRSPGVCLNHRTAVPPQRRGGSPDDHLATSSGNASPDSKAVGDENNSNNS
TTTTAAAASLVISSLDDEKARKPACLVPFILLDDDNGGGAGDGSDREPLS
PATSIASEGGSAPGWAERAGLSGGVAVAATSRTAGGRSSALSKRRSRLGK
ECPVAYDDDLSPPPTVMPAAAKNSGDREVPRFLRPVLVLLTLSLLAIGGA
ALLQEARRRRAAAGEGWAVGGGGGGVVLFGPAAYAAGGVQLPESVVDDIF
ERADKDKNGVIGDEEIQYLVERAGGSLLDDASEIEAGVASVIKNLDRNAD
QALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGY
DFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLR
ATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTV
MAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCVPGR
TSWFWSPGGGGGGAGGADSAEASLGGLVVATAVSVAVAFCLRALSGGGGG
GGGIQRGASGDVVGSRSGSGSFSGSSSGGSGSRRESEKMRQQPEAAITGT
ARSSAVAAAAVSDRDGVKGRGGASSPTSVHSNGSGWGDRERAEPRTKMLG
SGSTRPASSRRTKERLRRASSDVSPPRGGATAGKPGGGGGGGGGGLGRAG
VSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEWKWYRRGKHTC
CKCHEQFCDRKECGSRSHAFGACPVGGTCMCSSCMQLGGRRSSSLSGSMS
FDH*
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spliced messenger RNA

>Ec-27_003260.1 ID=Ec-27_003260.1|Name=Ec-27_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3012bp|location=Sequence derived from alignment at chr_27:2873963..2879854- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGAATCGTAAGAGTGCTGTGGCGACAAAGCTCGAAGGGGAGCAACA
GCAGCATCAACGGTGTGACCGTAGCGGAAGCCTAGTAGAGGCAGCTGGCG
GAGGGAAGGAATGCCGCAGGTCCCAGGCTGTACAAGTGTCTCCAGAACAC
TTGTTGAAGCCGCAGACCGCCTCGTCATCGTCAACCGCCGCTGCTGCTGC
TGTCGGCAATTTCGAAGCTAGTTCTGTCGAGGGCAGCCGGTACAGTTTAG
CCGCCGGGGAGGTGGGCGGAGCTTGGAGTGGGAGTCTGGCAGGGGCAGGA
GAGGGTACAGCAGTAGCGTGTGCGGTTGGAGAGGGAGGCGCGAGGGGAGA
CGGCAACAGGAGGTTGCTGAGGTGGCGATCGATTCGGCGCCTACAACAAT
ACAAGTCGTCTGGAGATGTCAGCGGCAAGTCCACAGTCAACGGTGGGGGG
AAGGGTACGGCCGCATGTGGCAGCAGCACGCAGTCGCCAAGTCGGTCGCC
AAGTCGGCTGTCGCTCGGACGCCTTGTCAGAGGGCCGGCGACGGCTTCGA
ACACAACAGGGACGGCGGTGGTGGCACCGGCAGCGGCGCCAGCAGCAACA
ACAAGATCTCCGGGTGTTTGCTTGAACCACCGAACAGCAGTTCCCCCGCA
ACGGCGAGGCGGCTCCCCCGACGACCACCTTGCTACCAGCAGCGGCAACG
CTAGCCCCGACTCTAAGGCGGTTGGTGACGAAAACAACAGCAACAACAGC
ACCACCACAACAGCGGCGGCAGCGTCTCTTGTGATATCGTCGCTCGACGA
CGAAAAGGCAAGAAAACCGGCATGCCTCGTGCCCTTCATACTACTCGACG
ACGACAACGGCGGCGGCGCTGGCGACGGGAGCGACCGCGAGCCGCTTTCG
CCGGCGACCTCCATCGCCTCGGAGGGCGGCAGCGCGCCCGGGTGGGCCGA
GCGGGCGGGCCTTTCCGGCGGGGTTGCCGTTGCGGCCACCTCTAGAACGG
CGGGGGGGCGGTCGAGTGCTCTCAGCAAGAGGAGGAGCCGCCTTGGCAAG
GAGTGTCCGGTGGCCTACGACGACGACTTGTCGCCGCCGCCGACGGTCAT
GCCGGCGGCGGCCAAGAACAGCGGGGACCGAGAAGTGCCCCGCTTCCTCC
GGCCGGTGTTGGTGCTCCTGACGCTCTCGCTGCTGGCGATCGGCGGGGCC
GCGCTTCTTCAGGAGGCCCGCAGACGAAGGGCGGCAGCCGGGGAGGGTTG
GGCTGTTGGTGGCGGCGGCGGCGGCGTGGTGCTGTTCGGCCCCGCGGCGT
ATGCGGCCGGCGGCGTGCAACTGCCGGAATCGGTGGTGGACGACATTTTC
GAGCGCGCCGACAAGGACAAGAACGGAGTCATCGGGGACGAGGAGATTCA
GTATCTTGTCGAGCGCGCCGGGGGCTCCCTCCTAGACGATGCCTCGGAGA
TCGAGGCCGGCGTGGCGAGCGTGATCAAGAACCTTGACAGGAACGCCGAC
CAAGCGCTCTCTCGGTCCGACCTCAACACGTACTGGGACCGGCTGGGAAC
GCTGCTGACGGTGGACGAGGCCGCCCAGTGGGTGCTGCACGCGGCGCAGC
TACCCCAGGAAGTGGCCGACGCCTTCGTCAACAACATGGTCACTGGCTAC
GACTTTCCCGAACTGGCAGCACGCCAGGGCGCTTTGTTGGAGCAAGACCT
CGACATCACCCGGCCGGCCTTCAAGCGGAATCTGGTCCGCAGCATGCAGT
GGAAGCTGTGGGGCATGGGCGAGGAGCCCGCGGCCCCCGCGGGGCTCCGC
GCGACGAGCTCCGCCTGCGGCGCGGCGAGCCTGGAGTGGGACCAGACGTG
CCCGGCCAACAGCGAGCTCAGCTTCCCGGTGCACAAGCACGTGCTCCGGC
GGGCCCTGCTGGGCGCCGAGGGGGAGAGGGACGGCGGCTGGGTGACGGTG
ATGGCCGGGCCGGGCGGCGCCTTCTTCGACGCGGGGCTCCAGCCGGGGGC
GGCCTACCGCTACGCCCTACAGGCGTGGAACGCGCTGGGGCACAGCGGCT
CCGTGGAGGTGGACGTGGTAGCCTCGTCTGAGGACTGCGTGCCGGGCCGG
ACCTCTTGGTTTTGGTCGCCCGGCGGCGGCGGAGGGGGAGCGGGCGGGGC
GGACAGCGCGGAGGCTTCGCTGGGCGGTCTGGTCGTCGCTACCGCTGTGT
CCGTAGCGGTGGCCTTTTGCTTGCGAGCGCTGAGCGGCGGGGGGGGTGGT
GGTGGCGGTATTCAGAGGGGCGCGTCAGGAGATGTTGTTGGCAGTAGGAG
CGGTAGCGGGAGTTTTAGTGGTAGCAGTAGCGGCGGCAGCGGCAGCAGAA
GGGAGTCGGAGAAGATGAGACAGCAACCCGAGGCTGCGATAACGGGCACG
GCCCGAAGTTCAGCGGTGGCGGCGGCGGCGGTTTCCGATCGGGACGGGGT
TAAGGGCCGGGGAGGGGCGAGTTCGCCGACGTCGGTTCACAGCAACGGCA
GCGGGTGGGGTGACAGAGAGAGGGCCGAGCCTCGCACGAAGATGTTGGGC
TCTGGTAGTACCAGGCCTGCGTCTTCGAGGCGAACGAAGGAGAGGTTGAG
ACGAGCCAGCAGCGACGTTTCTCCGCCGAGAGGAGGGGCGACGGCGGGGA
AACCGGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCTGGGCAGGGCGGGT
GTGAGCAGCGCGGCCATCGGCGATAGCGTGCGAAGGGAACGGGCGAAGAG
GATGATGATGTACGGGCACAGCTCCTCGAGGGACGACAAGGATGTGTGCA
AAGAGTGCGGCAAGGAGTGGAAATGGTATCGGAGGGGAAAACACACTTGT
TGCAAGTGCCACGAGCAGTTCTGTGACCGCAAAGAATGTGGTTCACGCTC
CCATGCTTTCGGGGCCTGTCCCGTGGGGGGCACGTGCATGTGCAGCTCGT
GCATGCAGTTGGGGGGCCGACGAAGCTCTTCGCTCTCGGGGTCGATGTCG
TTCGATCACTGA
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protein sequence of Ec-27_003260.1

>Ec-27_003260.1 ID=Ec-27_003260.1|Name=Ec-27_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1004bp
MWNRKSAVATKLEGEQQQHQRCDRSGSLVEAAGGGKECRRSQAVQVSPEH
LLKPQTASSSSTAAAAAVGNFEASSVEGSRYSLAAGEVGGAWSGSLAGAG
EGTAVACAVGEGGARGDGNRRLLRWRSIRRLQQYKSSGDVSGKSTVNGGG
KGTAACGSSTQSPSRSPSRLSLGRLVRGPATASNTTGTAVVAPAAAPAAT
TRSPGVCLNHRTAVPPQRRGGSPDDHLATSSGNASPDSKAVGDENNSNNS
TTTTAAAASLVISSLDDEKARKPACLVPFILLDDDNGGGAGDGSDREPLS
PATSIASEGGSAPGWAERAGLSGGVAVAATSRTAGGRSSALSKRRSRLGK
ECPVAYDDDLSPPPTVMPAAAKNSGDREVPRFLRPVLVLLTLSLLAIGGA
ALLQEARRRRAAAGEGWAVGGGGGGVVLFGPAAYAAGGVQLPESVVDDIF
ERADKDKNGVIGDEEIQYLVERAGGSLLDDASEIEAGVASVIKNLDRNAD
QALSRSDLNTYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGY
DFPELAARQGALLEQDLDITRPAFKRNLVRSMQWKLWGMGEEPAAPAGLR
ATSSACGAASLEWDQTCPANSELSFPVHKHVLRRALLGAEGERDGGWVTV
MAGPGGAFFDAGLQPGAAYRYALQAWNALGHSGSVEVDVVASSEDCVPGR
TSWFWSPGGGGGGAGGADSAEASLGGLVVATAVSVAVAFCLRALSGGGGG
GGGIQRGASGDVVGSRSGSGSFSGSSSGGSGSRRESEKMRQQPEAAITGT
ARSSAVAAAAVSDRDGVKGRGGASSPTSVHSNGSGWGDRERAEPRTKMLG
SGSTRPASSRRTKERLRRASSDVSPPRGGATAGKPGGGGGGGGGGLGRAG
VSSAAIGDSVRRERAKRMMMYGHSSSRDDKDVCKECGKEWKWYRRGKHTC
CKCHEQFCDRKECGSRSHAFGACPVGGTCMCSSCMQLGGRRSSSLSGSMS
FDH*
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mRNA from alignment at chr_27:2873963..2879854-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_003260.1 ID=Ec-27_003260.1|Name=Ec-27_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5892bp|location=Sequence derived from alignment at chr_27:2873963..2879854- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGGAATCGTAAGAGTGCTGTGGCGACAAAGCTCGAAGGGTAAGCCGG
AGTGTTTGCTCGGTCAGACCAACCATATTCTTGGAACTGAAAAGCAAGAA
ACCAAAACGGGATGGGGTTGGATACCGAGCGTAGAGCCGGCGACGCGATG
GAAAGCGAGGAGAAGCTGCGCATGCTTGACCACTTTCCCTGATCATTTCG
TATTCCTCGTTGTGTGTTGTAGATGGTCAGGCGTTTTGCTAGAGAAAGAG
AAACAGAGACAGAATAGCCTTAGTCGAATTGCTTCCGCACGTGACCCGGT
GGACACCTCCCTCCCGGATGAAACGTTCACACCATCACCCTCCGCTGCCC
CTTCCCTTCGTCGGCCGCCACGCGACGTCCAGGGAGCAACAGCAGCATCA
ACGGTGTGACCGTAGCGGAAGCCTAGTAGAGGCAGCTGGCGGAGGGAAGG
AATGCCGCAGGTCCCAGGCTGTACAAGTGTCTCCAGAACACTTGTTGAAG
CCGCAGACCGCCTCGTCATCGTCAACCGCCGCTGCTGCTGCTGTCGGCAA
TTTCGAAGCTAGTTCTGTCGAGGGCAGCCGGTACAGTTTAGCCGCCGGGG
AGGTGGGCGGAGCTTGGAGTGGGAGTCTGGCAGGGGCAGGAGAGGGTACA
GCAGTAGCGTGTGCGGTTGGAGAGGGAGGCGCGAGGGGAGACGGCAACAG
GAGGTTGCTGAGGTGGCGATCGATTCGGCGCCTACAACAATACAAGTCGT
CTGGAGATGTCAGCGGCAAGTCCACAGTCAACGGTGGGGGGAAGGGTACG
GCCGCATGTGGCAGCAGCACGCAGTCGCCAAGTCGGTCGCCAAGTCGGCT
GTCGCTCGGACGCCTTGTCAGAGGGCCGGCGACGGCTTCGAACACAACAG
GGACGGCGGTGGTGGCACCGGCAGCGGCGCCAGCAGCAACAACAAGATCT
CCGGGTGTTTGCTTGAACCACCGAACAGCAGTTCCCCCGCAACGGCGAGG
CGGCTCCCCCGACGACCACCTTGCTACCAGCAGCGGCAACGCTAGCCCCG
ACTCTAAGGCGGTTGGTGACGAAAACAACAGCAACAACAGCACCACCACA
ACAGCGGCGGCAGCGTCTCTTGTGATATCGTCGCTCGACGACGAAAAGGC
AAGAAAACCGGCATGCCTCGTGCCCTTCATACTACTCGACGACGACAACG
GCGGCGGCGCTGGCGACGGGAGCGACCGCGAGCCGCTTTCGCCGGCGACC
TCCATCGCCTCGGAGGGCGGCAGCGCGCCCGGGTGGGCCGAGCGGGCGGG
CCTTTCCGGCGGGGTTGCCGTTGCGGCCACCTCTAGAACGGCGGGGGGGC
GGTCGAGTGCTCTCAGCAAGAGGAGGAGCCGCCTTGGCAAGGAGTGTCCG
GTGGCCTACGACGACGACTTGTCGCCGCCGCCGACGGTCATGCCGGCGGC
GGCCAAGAACAGCGGGGACCGAGAAGTGCCCCGCTTCCTCCGGCCGGTGT
TGGTGCTCCTGACGCTCTCGCTGCTGGCGATCGGCGGGGCCGCGCTTCTT
CAGGAGGCCCGCAGACGAAGGGCGGCAGCCGGGGAGGGTTGGGCTGTTGG
TGGCGGCGGCGGCGGCGTGGTGCTGTTCGGCCCCGCGGCGTATGCGGCCG
GCGGCGTGCAACTGCCGGAATCGGTGGTGGACGACATTTTCGAGCGCGCC
GACAAGGACAAGAACGGAGTCATCGGGGACGAGGAGATTCAGTATGTGAG
TTAGTTGAAAGCCAGACGGACAGGAGATTCAGTGTGTGAGTTTGTTAAAT
GGCAAGCGGACATGGATCGTTTACGGCAGTAGTAGCTCGTATGGTCATGG
AGGGACCTAATTTTTGTAGATTTGGTAGCGCGTGTTTTCTCTTTTGTCTT
TTTTTCAGTCCAATTACCTCTGTTAGCTAAGTGGGCTCAAAATGTTTATG
ATGGGTGTTCCTTTTGCTCTAGGGGAGAGTGTGCGAGCATGTGCTTTTGA
TAATTGGGGGGAACAATCCACCCACTTTGCATCTTGTGGCTGGACTGACT
CGACATCACTCGGTTCACTCCCGTCCGCCCCCCCCTGCCCCCCAACGAAC
ATCCCTCTAGCTTGTCGAGCGCGCCGGGGGCTCCCTCCTAGACGATGCCT
CGGAGATCGAGGCCGGCGTGGCGAGCGTGATCAAGAACCTTGACAGGAAC
GCCGACCAAGCGCTCTCTCGGTCCGACCTCAACACGTACTGGGACCGGCT
GGGTGAGGCGGCAGGGCAGGATATGGCGTGATTGGCTTGGCTTGTCTACA
ACCGCTCACAACCGGTTGTTGGTCGCCGTCTTGCGGAGCGTTCGGTTGGT
CCGGTCGGATGGTGTCTGGAACACTCGATGAAGAAAGTTGCACCCGAACG
ATGCTGCTCTTGTCTTCTGTGTTTTTCGATGCGATGCTGCGTGCTCTTGC
CGCCATTTGTGGTAACAACACACGAGGGCTAGCAAACCCCCGCCTTTCCC
TCCGAGAGAACCAGTGGTAGTCGCGCAGCCATCAGGACTTCGTTCCCGAA
ATCATGGGCCAGTCATTGTCCCCCCGTGTCGTCGTTGTCAAGTGTTTTCT
AAACGAAGGAATGTTTCTGCACGAACGGTCATGTCTCTTGAAGGAAGAAA
GGGAATGTTTCTACACGAACGGTCATGTTTCTTGAAGAAAGGGCATGTTT
CTACTCGAACGGTCATGTTTCTTGAAGAAAGGGAGATGTTTCTTGAAGAA
AAGGAATATTTCTAAATGAACGGATGCCCTCGTGATCACAGGAACGCTGC
TGACGGTGGACGAGGCCGCCCAGTGGGTGCTGCACGCGGCGCAGCTACCC
CAGGAAGTGGCCGACGCCTTCGTCAACAACATGGTCACTGGCTACGACTT
TCCCGAACTGGCAGCACGCCAGGTGAGCGGTGCTTCCGGGGGCGCAGGTT
CGGGCCCAATTGTTCGTCTCACCCTTGGGGGAGGGCTTGTCTCACCGTTG
GGAGGTTTGTGCAAGTTTTACTGTTTTGGCCTTGTACGTCAACGGTGGCA
GCGGGATGCGAACCGGGGTTGGAGGCAGGGGAGAACGACGGTAAATAGTG
GTTTTGGGGCGTTTGACTCAGGCCCGAGAGGGAGGTGCGAGGGTTGACGG
AAGTCTTTTTCAACTACACACACCGAAAGCTAACGCAGAGCAAACGGGAG
ACTCGATCGGGAAAATGTTTTGCTCCGAGGAAAAATGGCTTGTAATTCGT
TGCTTGCCTGAAAAATGATAGAACACAACGAACTACCGCGTGTTGCCTCA
GGTGCTACTTCTCATGTACCCTCATCTGATTTCGTTTTTTGGTTCTTGTC
AGAGTAAGTGTCTACATCGTTGGTTTTGCTCTTGGCACGCACAAAGAAAT
GAACGAGCAACACCACCTACTTCTATTTCACAACAATCAATTCATCTTCA
TTTTTCTTTTTTTTGAACGCAGGGCGCTTTGTTGGAGCAAGACCTCGACA
TCACCCGGCCGGCCTTCAAGCGGAATCTGGTCCGCAGCATGCAGTGGAAG
CTGTGGGGCATGGGCGAGGAGCCCGCGGCCCCCGCGGGGCTCCGCGCGAC
GAGCTCCGCCTGCGGCGCGGCGAGCCTGGAGTGGGACCAGACGTGCCCGG
CCAACAGCGAGCTCAGCTTCCCGGTGCACAAGCACGTGCTCCGGCGGGCC
CTGCTGGGCGCCGAGGGGGAGAGGGACGGCGGCTGGGTGACGGTGATGGC
CGGGCCGGGCGGCGCCTTCTTCGACGCGGGGCTCCAGCCGGGGGCGGCCT
ACCGCTACGCCCTACAGGCGTGGAACGCGCTGGGGCACAGCGGCTCCGTG
GAGGTGGACGTGGTAGCCTCGTCTGAGGACTGCGTGCCGGGCCGGACCTC
TTGGTTTTGGTCGCCCGGCGGCGGCGGAGGGGGAGCGGGCGGGGCGGACA
GCGCGGAGGCTTCGCTGGGCGGTCTGGTCGTCGCTACCGCTGTGTCCGTA
GCGGTGGCCTTTTGCTTGCGAGCGCTGAGCGGCGGGGGGGGTGGTGGTGG
CGGTATTCAGAGGGGCGCGTCAGGAGATGTTGTTGGCAGTAGGAGCGGTA
GCGGGAGTTTTAGTGGTAGCAGTAGCGGCGGCAGCGGCAGCAGAAGGGAG
TCGGAGAAGATGAGACAGCAACCCGAGGCTGCGATAACGGGCACGGCCCG
AAGTTCAGCGGTGGCGGCGGCGGCGGTTTCCGATCGGGACGGGGTTAAGG
GCCGGGGAGGGGCGAGTTCGCCGACGTCGGTTCACAGCAACGGCAGCGGG
TGGGGTGACAGAGAGAGGGCCGAGCCTCGCACGAAGATGTTGGGCTCTGG
TAGTACCAGGCCTGCGTCTTCGAGGCGAACGAAGGAGAGGTTGAGACGAG
CCAGCAGCGACGTTTCTCCGCCGAGAGGAGGGGCGACGGCGGGGAAACCG
GGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCTGGGCAGGGCGGGTGTGAG
CAGCGCGGCCATCGGCGATAGCGTGCGAAGGGAACGGGCGAAGAGGATGA
TGATGTACGGGCACAGCTCCTCGAGGGACGACAAGGATGTGTGCAAAGAG
TGCGGCAAGGAGTGGAAATGGTGAGACTAAGTATATAGATGGTGGGTGGG
CCGCACAGGCACCCCGTCAAGTTTTATAACAGTGTATCACTTTTGTCCCT
TTTCTCAGATCACAGAAACATCGATCCCGCTCCGCCTCTCACATGCCGTT
ATTCGGCTCTCTTGACTTACCGCAGCACGCCTACGGGCAGTACCGATTGA
AGCCAATCTGACCATCCTCTACCTGTCGTCTGCTCATCTCTCCTCGGCAA
AAGTGCTTCAGTGCGTGCATGCGAAATTCCGAAACATAGCAAAGTGTAGC
GGAGATGAACTCCAGACAGAAACGAGGGAGCTCACTCAAGCACACAAACT
CACACGGGCCATGTACAACGATCTTGCGCATTGTCACACGACCACCAGTC
ATCAGTACCTTATGGCCATCCGGGTGATTTCACCCGTTGTCTCTTGGAAA
AATAGTTGGTCGTCAACCATGTGTGGACTGGAGTCCGCAGTCAGCCGCGC
GCGCGTAAAGATGTGCAGTCATGGAGGCAATATCAAGCGTATGAATTGTC
ACTCTTGAACTCCCATCCGTCCATGTCTCAACGGGTACGTATGAGGGGTG
GGATATATGCCCGAGAGTTGGTGCCAGTTCTGTGCGTGGATTTACGTTCG
TCGTGGTTTGAATTTTTGCGGGATTTAGGCCAGTTTTCCTCGCATAGCAC
GGAGCGCTGTTGTGTTAAGTTCGTCGTCTACTCTTGCTCAACAAAAGGTA
CCTCCCAATATCCGTCTGATGCAAAACAGGGTCCGCTCGCGCCGTTTCTC
TTTCCACTTTAGCTCTCGCATAGCACAGTAGCGTGAGCCAAGACTAGACT
CGGAGATTGTTGCCGTGTCTTTTGATTGGCATCAATTTTCCTCCTCTGCT
GCGCCTCTTTCTGTCCCTATGTACAGCCCATTCAGACGGGCGCCGAAAGC
GAGGGTGGCGATGAAATTCCCCACAAAGACTTGGGTAGCCCCCAAGGGTT
GACTGCTGGATGCAGCGCTAAGAGATTGTTGCCAATATATTGCCTGTACC
TTCGCCCCGCCATCTTCCCACCACATCTCCCCCCCCCCGCGGGCTCTTTA
TTCAGGTATCGGAGGGGAAAACACACTTGTTGCAAGTGCCACGAGCAGTT
CTGTGACCGCAAAGAATGTGGTTCACGCTCCCATGCTTTCGGGGCCTGTC
CCGTGGGGGGCACGTGCATGTGCAGCTCGTGCATGCAGTTGGGGGGCCGA
CGAAGCTCTTCGCTCTCGGGGTCGATGTCGTTCGATCACTGA
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Coding sequence (CDS) from alignment at chr_27:2873963..2879854-

>Ec-27_003260.1 ID=Ec-27_003260.1|Name=Ec-27_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3012bp|location=Sequence derived from alignment at chr_27:2873963..2879854- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGGAATCGTAAGAGTGCTGTGGCGACAAAGCTCGAAGGGGAGCAACA
GCAGCATCAACGGTGTGACCGTAGCGGAAGCCTAGTAGAGGCAGCTGGCG
GAGGGAAGGAATGCCGCAGGTCCCAGGCTGTACAAGTGTCTCCAGAACAC
TTGTTGAAGCCGCAGACCGCCTCGTCATCGTCAACCGCCGCTGCTGCTGC
TGTCGGCAATTTCGAAGCTAGTTCTGTCGAGGGCAGCCGGTACAGTTTAG
CCGCCGGGGAGGTGGGCGGAGCTTGGAGTGGGAGTCTGGCAGGGGCAGGA
GAGGGTACAGCAGTAGCGTGTGCGGTTGGAGAGGGAGGCGCGAGGGGAGA
CGGCAACAGGAGGTTGCTGAGGTGGCGATCGATTCGGCGCCTACAACAAT
ACAAGTCGTCTGGAGATGTCAGCGGCAAGTCCACAGTCAACGGTGGGGGG
AAGGGTACGGCCGCATGTGGCAGCAGCACGCAGTCGCCAAGTCGGTCGCC
AAGTCGGCTGTCGCTCGGACGCCTTGTCAGAGGGCCGGCGACGGCTTCGA
ACACAACAGGGACGGCGGTGGTGGCACCGGCAGCGGCGCCAGCAGCAACA
ACAAGATCTCCGGGTGTTTGCTTGAACCACCGAACAGCAGTTCCCCCGCA
ACGGCGAGGCGGCTCCCCCGACGACCACCTTGCTACCAGCAGCGGCAACG
CTAGCCCCGACTCTAAGGCGGTTGGTGACGAAAACAACAGCAACAACAGC
ACCACCACAACAGCGGCGGCAGCGTCTCTTGTGATATCGTCGCTCGACGA
CGAAAAGGCAAGAAAACCGGCATGCCTCGTGCCCTTCATACTACTCGACG
ACGACAACGGCGGCGGCGCTGGCGACGGGAGCGACCGCGAGCCGCTTTCG
CCGGCGACCTCCATCGCCTCGGAGGGCGGCAGCGCGCCCGGGTGGGCCGA
GCGGGCGGGCCTTTCCGGCGGGGTTGCCGTTGCGGCCACCTCTAGAACGG
CGGGGGGGCGGTCGAGTGCTCTCAGCAAGAGGAGGAGCCGCCTTGGCAAG
GAGTGTCCGGTGGCCTACGACGACGACTTGTCGCCGCCGCCGACGGTCAT
GCCGGCGGCGGCCAAGAACAGCGGGGACCGAGAAGTGCCCCGCTTCCTCC
GGCCGGTGTTGGTGCTCCTGACGCTCTCGCTGCTGGCGATCGGCGGGGCC
GCGCTTCTTCAGGAGGCCCGCAGACGAAGGGCGGCAGCCGGGGAGGGTTG
GGCTGTTGGTGGCGGCGGCGGCGGCGTGGTGCTGTTCGGCCCCGCGGCGT
ATGCGGCCGGCGGCGTGCAACTGCCGGAATCGGTGGTGGACGACATTTTC
GAGCGCGCCGACAAGGACAAGAACGGAGTCATCGGGGACGAGGAGATTCA
GTATCTTGTCGAGCGCGCCGGGGGCTCCCTCCTAGACGATGCCTCGGAGA
TCGAGGCCGGCGTGGCGAGCGTGATCAAGAACCTTGACAGGAACGCCGAC
CAAGCGCTCTCTCGGTCCGACCTCAACACGTACTGGGACCGGCTGGGAAC
GCTGCTGACGGTGGACGAGGCCGCCCAGTGGGTGCTGCACGCGGCGCAGC
TACCCCAGGAAGTGGCCGACGCCTTCGTCAACAACATGGTCACTGGCTAC
GACTTTCCCGAACTGGCAGCACGCCAGGGCGCTTTGTTGGAGCAAGACCT
CGACATCACCCGGCCGGCCTTCAAGCGGAATCTGGTCCGCAGCATGCAGT
GGAAGCTGTGGGGCATGGGCGAGGAGCCCGCGGCCCCCGCGGGGCTCCGC
GCGACGAGCTCCGCCTGCGGCGCGGCGAGCCTGGAGTGGGACCAGACGTG
CCCGGCCAACAGCGAGCTCAGCTTCCCGGTGCACAAGCACGTGCTCCGGC
GGGCCCTGCTGGGCGCCGAGGGGGAGAGGGACGGCGGCTGGGTGACGGTG
ATGGCCGGGCCGGGCGGCGCCTTCTTCGACGCGGGGCTCCAGCCGGGGGC
GGCCTACCGCTACGCCCTACAGGCGTGGAACGCGCTGGGGCACAGCGGCT
CCGTGGAGGTGGACGTGGTAGCCTCGTCTGAGGACTGCGTGCCGGGCCGG
ACCTCTTGGTTTTGGTCGCCCGGCGGCGGCGGAGGGGGAGCGGGCGGGGC
GGACAGCGCGGAGGCTTCGCTGGGCGGTCTGGTCGTCGCTACCGCTGTGT
CCGTAGCGGTGGCCTTTTGCTTGCGAGCGCTGAGCGGCGGGGGGGGTGGT
GGTGGCGGTATTCAGAGGGGCGCGTCAGGAGATGTTGTTGGCAGTAGGAG
CGGTAGCGGGAGTTTTAGTGGTAGCAGTAGCGGCGGCAGCGGCAGCAGAA
GGGAGTCGGAGAAGATGAGACAGCAACCCGAGGCTGCGATAACGGGCACG
GCCCGAAGTTCAGCGGTGGCGGCGGCGGCGGTTTCCGATCGGGACGGGGT
TAAGGGCCGGGGAGGGGCGAGTTCGCCGACGTCGGTTCACAGCAACGGCA
GCGGGTGGGGTGACAGAGAGAGGGCCGAGCCTCGCACGAAGATGTTGGGC
TCTGGTAGTACCAGGCCTGCGTCTTCGAGGCGAACGAAGGAGAGGTTGAG
ACGAGCCAGCAGCGACGTTTCTCCGCCGAGAGGAGGGGCGACGGCGGGGA
AACCGGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCTGGGCAGGGCGGGT
GTGAGCAGCGCGGCCATCGGCGATAGCGTGCGAAGGGAACGGGCGAAGAG
GATGATGATGTACGGGCACAGCTCCTCGAGGGACGACAAGGATGTGTGCA
AAGAGTGCGGCAAGGAGTGGAAATGGTATCGGAGGGGAAAACACACTTGT
TGCAAGTGCCACGAGCAGTTCTGTGACCGCAAAGAATGTGGTTCACGCTC
CCATGCTTTCGGGGCCTGTCCCGTGGGGGGCACGTGCATGTGCAGCTCGT
GCATGCAGTTGGGGGGCCGACGAAGCTCTTCGCTCTCGGGGTCGATGTCG
TTCGATCACTGA
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Synonyms
The feature 'Ec-27_003260.1' has the following synonyms
Synonym
Esi0000_0564
Esi_0000_0564
Putative unchara