Ec-27_003160.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_003160.2
Unique NameEc-27_003160.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length114
Homology
BLAST of Ec-27_003160.2 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.310e-111
Identity = 247/349 (70.77%), Postives = 259/349 (74.21%), Query Frame = 3
Query:  111 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPR--------DWTCPTRPTSTPSEGPRRTSLVERFVSESL--LWRC-----RVVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*--ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 1106
            MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGM   F          ++    R T   +    R   +   + ES   + RC       ++G   V  A D      +R  S   G  +      L    G L+R                 +IVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL
Sbjct:    1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGA-CVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQR---------------MPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 333          
BLAST of Ec-27_003160.2 vs. uniprot
Match: UPI0003593957 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI0003593957)

HSP 1 Score: 114 bits (286), Expect = 2.750e-24
Identity = 98/325 (30.15%), Postives = 139/325 (42.77%), Query Frame = 3
Query:   81 LLPPSPSHTIMYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRDWTCPTRPTSTPSEGPRRTSLVERFVSESL---------LWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAM 1016
            L+  + S  + Y+ FETL V+ P  YV HV++NRP K NAMN  FW E  DCF  ++ D + R V++SG    F                     S     V E L         + RC         +G +    D      +R  +     +++   L    G+         +   G      +I+GN+SLCREL YT R F A EA  MGFVSR+    EA                                         ++AA++  A  IA +SPVA+ G+K N++Y+RDHSV +GLEY AT++ A LQ+ D   A+
Sbjct:   30 LMARAMSSQVTYE-FETLNVTSPEEYVKHVELNRPKKMNAMNTAFWTEMIDCFNKLAVDPECRVVILSGAGKMFTAGLDFNDNEVMLIQMSDLDVSRKAVAVKEGLRHLQNSFTSIERCNKPVITAMHQGCIGAGVDMSAAADIRYCTDDAWFQIKEIEL----GL---------AADLGTLQRFPKIIGNDSLCRELVYTARKFTAEEAKDMGFVSRIFPDKEA-----------------------------------------MMAATVELAQTIASKSPVAIQGSKINMVYSRDHSVPEGLEYMATYNSAMLQSEDTMKAV 299          
BLAST of Ec-27_003160.2 vs. uniprot
Match: UPI000359749E (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X2 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359749E)

HSP 1 Score: 114 bits (284), Expect = 5.350e-24
Identity = 95/313 (30.35%), Postives = 136/313 (43.45%), Query Frame = 3
Query:  123 FETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRDWTCPT----RPTSTPSEGPRRT-----SLVERFVSESLLWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*--ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAM 1016
            FETL V+ P  YV HV++NRP K NAMN  FW +  DCF+ ++ D + R V++SG    F            R   +  E  R+      SL+    S ++L  C            +    D      +R  +     +++     L    G L+R                 +I+GN+SLCREL YT R F   EA  MGF+SR+    +A                                         ++AASI  A  IA +SPVAV G+K NL+Y+RDH+V +GL+Y  TW+ A LQ+ D + A+
Sbjct:   46 FETLKVTSPEEYVKHVELNRPKKLNAMNTAFWNDMIDCFRKLAVDPECRVVILSGAGRMFTAGMDYKDNEALRTALSDKEVSRKAVALNQSLLHMQTSYTVLETCNKPVIAAIHNACIGGGIDMASATDIRYCTSDAWFQIKEIDIGLAADLGTLQR---------------FPKIIGNDSLCRELVYTARKFTPEEAKHMGFISRIFPDKDA-----------------------------------------MMAASIELAKTIASKSPVAVQGSKVNLVYSRDHTVQEGLDYMVTWNSAMLQSEDTAKAV 302          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A6M5KEJ4_9DINO (Dienoyl coA isomerase n=1 Tax=Gambierdiscus pacificus TaxID=439314 RepID=A0A6M5KEJ4_9DINO)

HSP 1 Score: 112 bits (281), Expect = 6.340e-24
Identity = 105/325 (32.31%), Postives = 147/325 (45.23%), Query Frame = 3
Query:  108 IMYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPR--DWTCPTRPTST-PSEG-PRRTS--LVERFVSESL--------LWRCR---VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*ALF*GRGI---LRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 1022
            + Y  +ETL V+     +LHV++NRP K NAMN +FW E R+CF   +ED + RA+V+S     F    D +    P S  P+ G P+R +  L  R   E L        +  C    +V G GAV                GG+ L       +  R     ++    G  +   G      +I+GNE   RELAYT R F A EA  +GF++R+                                            R + +AA++  A EIA++ P+AV GTKR L + R+HSV DGLEY ATW+GA +Q+ DL+TA  A
Sbjct:    1 MQYGPYETLRVT-KEDGILHVELNRPQKLNAMNRRFWQETRECFSAAAEDTEARAIVISAQGRAFSSGLDLSDMAPPASEEPASGKPKRDAGRLAYRIRREVLHTQESFNAIEACPQPVIVVGHGAVV--------------GGGIDLMCTCCIRYASRDAWFTIKEVDIGLAAD-VGTLQRLPKIIGNEGAVRELAYTARKFTAEEALALGFLTRLF-----------------------------------------DTRDQALAAAMSLAKEIAQKPPLAVVGTKRMLDFTRNHSVQDGLEYVATWNGAMMQSPDLATAAAA 268          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI)

HSP 1 Score: 113 bits (283), Expect = 8.130e-24
Identity = 98/311 (31.51%), Postives = 143/311 (45.98%), Query Frame = 3
Query:  123 FETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRD---WTCPTRPTSTPSEGPRRTSLVER---FVSESL--LWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMR 1019
            FETL V+ P  +V+ V++NRP KRNAMN  FW E  DCF+ I++DAD RAVV++G    F          +   S+  E  RR  L+ +   F+ +S   + +C       +    V    D      +R  S     +++   +    G+         +   G      +I+GN+SL REL +TGR F A EA + GFVSRV                                            R  +V  ++  A +IA++SPVA+ GTK NL ++RDHS  +GLEY ATW+ A LQ  D+  A++
Sbjct:   53 FETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGSNLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDI----GL---------AADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPG-----------------------------------------RDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQ 309          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN)

HSP 1 Score: 112 bits (280), Expect = 1.570e-23
Identity = 100/315 (31.75%), Postives = 141/315 (44.76%), Query Frame = 3
Query:  120 GFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRDWTCPTRPTSTPSEGP--RRTSLVERFVSE-----SLLWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*--ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAA 1025
             FETL V+ P  YVL V++NRP KRNAMNA FW E  +CF  +S D D R+VVVSG    F          +  P E    R++  ++  ++      + + +C     V      V    D      +R  S     +++     L    G L+R                 ++VGN+SL RELAYT R   A EA R G VSR++                                           R   + A+I TA+ IA +SP+AV G+K +++Y+RDHSV +GLE+ A W+ A LQ+ D+ TA  AA
Sbjct:   40 SFETLKVTKPREYVLQVELNRPEKRNAMNAAFWREMVECFNKVSTDPDCRSVVVSGAGKLFTAGIDLQEIASLMPMESDVGRKSMKLKGAIARYQDTFTCMEKCPKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKEVDVGLAADVGTLQR---------------LPKVVGNDSLARELAYTARKMMADEAMRCGLVSRIL-----------------------------------------PDRESTIEAAIETAALIASKSPIAVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAAMAA 298          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.210e-23
Identity = 111/347 (31.99%), Postives = 154/347 (44.38%), Query Frame = 3
Query:  114 YDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPR--DWTCPTRPTSTPSEGPRRTSLVERFV------------SESLLWRC-----RVVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*A--LF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHP 1091
            Y GFETL V     +VLHV++NRP++ NAMNA++W E R  F  I+ D +VRAVV+SG    F    D     +PT     GP + S V R              S + + RC       ++G   +  A D      +R  S      ++  A  L    G L+R                 ++VGN+S  R++ Y+ RTFGAAEA   G VS+V                     +GG                    R  ++AA++  A+ IA  SP+AV GTKR+L +++DHSV DGL + A W+ AAL   DL    R          RR+ GA AE  + P
Sbjct:    5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGA-CMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQR---------------LPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVC--------------------SGG--------------------REGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDLMIGARPP-------DRRKGGAAAEGTTKP 288          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A6V1PVH1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVH1_HETAK)

HSP 1 Score: 111 bits (277), Expect = 4.790e-23
Identity = 100/320 (31.25%), Postives = 137/320 (42.81%), Query Frame = 3
Query:   96 PSHTIMYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPR--DWTCPTRPTSTPSEGP---RRTSLVERFVSESLLWRCRVVYGRGAVPPARDRGDPRGVRGRSGGLGLRL------RH*ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 1022
            P++      FETL VSFP +YV HVQ+NRP + NAMN   W E  +CF+ + ED   R++V+SG    F    D          PSEG    R+   + +F+         + +    V  A        V G   G G+ L      R+           +      +   G       ++G+ SL  EL +TGR   AAEA   G VSR  A PEA                                         ++A ++ TA+  A +SPVAV GTK NLLYARD  V +GL + A W+ AA+Q GD+S A+ A
Sbjct:   36 PNNCTTTQQFETLLVSFPEKYVAHVQLNRPKQMNAMNLSMWRELGECFEALGEDPKCRSIVISGNGKAFTAGLDLKEVGEILMGPSEGTDAARKAFFLRKFIGGLQNSITSIEHCNKPVVAA--------VAGPCIGAGVDLITACDIRYCTEDEATYFQVKEVDVGLAADVGTLQRLPTVMGSRSLVAELCFTGRRLPAAEALSCGLVSRGFAGPEA-----------------------------------------LLAGALGTAAAAAAKSPVAVQGTKVNLLYARDRGVAEGLRHNALWNAAAMQTGDISKAVSA 306          
BLAST of Ec-27_003160.2 vs. uniprot
Match: UPI001CF3EB97 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3EB97)

HSP 1 Score: 111 bits (277), Expect = 4.980e-23
Identity = 95/313 (30.35%), Postives = 142/313 (45.37%), Query Frame = 3
Query:  120 GFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRDWTCPTRPTSTPSEGP---RRTSLVERFV-----SESLLWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRA 1022
             FETL VS P  +V+HV++NRP KRNAMN  FW E  +CF+ I++D++ RAVV++G    F              + G    RR   + +F+     S  ++  C          G +    D      +R  S     +++   L    G+         +   G      +IVGN+SL REL YTGR+F + EA  +GFVSR+                                          S R  +V  ++  A+EI+++SPVA+ G K NL + R+HS   G+EY ATW+ A LQ+ D+  A++A
Sbjct:   52 SFETLAVSKPHEHVIHVELNRPEKRNAMNKAFWREMVECFKQIADDSNCRAVVLTGAGKIFTAGLDLREMGGDLMNSGQDPSRRAFYLRKFILSLQKSFQVIEECPQPVIAAVHSGCLGGGIDMICSCDIRLCSADAWFQVKEIDL----GL---------AADLGTLQKFPKIVGNDSLARELCYTGRSFTSQEALNLGFVSRMC-----------------------------------------SDRESLVKEAVELATEISKKSPVAMAGIKHNLNFTREHSPKAGMEYMATWNMAMLQSEDILKAVQA 310          
BLAST of Ec-27_003160.2 vs. uniprot
Match: A0A0B7BF52_9EUPU (Uncharacterized protein n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BF52_9EUPU)

HSP 1 Score: 108 bits (271), Expect = 1.270e-22
Identity = 90/313 (28.75%), Postives = 137/313 (43.77%), Query Frame = 3
Query:  123 FETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMATTFPRDWTCPTRPT--STPSEGP-RRTSLVERFVSE-----SLLWRCR----VVYGRGAVPPARDRGDPRGVRGRSGGLGLRLRH*ALF*GRGILRR*GQGRPSGGRGDATTNAQIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAA 1025
            F+TL V+ PA +V +V++NRP KRNAMN  FW E  +CF  ++ D D R +++SG    F                 + P RR   + + VS+     S++ +C            +    D      +R  +      ++   L     +             G      +I+GN+SL RELAYTGR F + EA  MGFVSRV+                                           + E++ A++  A  IA +SP+AV G+K N++Y+RDH+V   L+Y ATW+   LQ+ D+  A+ AA
Sbjct:    9 FQTLSVTTPAEFVKNVELNRPEKRNAMNVTFWAEMVECFNKLAVDQDCRVIILSGAGKMFTSGLDVNDSGVFQKIQEDDPGRRAFFISKMVSQYQKSFSVIEQCHKPVLAAIHSACIGGGIDMISACDIRYSTQDAWFAIKEVDLGLAADV-------------GTLQRFQKIIGNDSLFRELAYTGRRFNSDEAKSMGFVSRVLL-----------------------------------------DKNEMMVAALEVAKVIASKSPIAVQGSKHNIVYSRDHNVQASLDYMATWNSTMLQSEDVLKAITAA 267          
The following BLAST results are available for this feature:
BLAST of Ec-27_003160.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ0_ECTSI1.310e-11170.77Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ect... [more]
UPI00035939572.750e-2430.15delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI000359749E5.350e-2430.35delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A6M5KEJ4_9DINO6.340e-2432.31Dienoyl coA isomerase n=1 Tax=Gambierdiscus pacifi... [more]
A0A2B4RA31_STYPI8.130e-2431.51Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A1S3K0E9_LINUN1.570e-2331.75delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A835YKC1_9STRA2.210e-2331.99Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tri... [more]
A0A6V1PVH1_HETAK4.790e-2331.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001CF3EB974.980e-2330.35delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A0B7BF52_9EUPU1.270e-2228.75Uncharacterized protein n=2 Tax=Arion vulgaris Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:2778700..2786675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2315
Hectar predicted targeting categoryother localisation
Gene idEc-27_003160.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_003160Ec-27_003160Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 2778700..2786675 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003160.2Ec-27_003160.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 2779132..2779473 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003160.2.4Ec-27_003160.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2778700..2780409 -
Ec-27_003160.2.3Ec-27_003160.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2780856..2781047 -
Ec-27_003160.2.2Ec-27_003160.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2782281..2782402 -
Ec-27_003160.2.1Ec-27_003160.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 2786385..2786675 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0031603UTR:Ec-27_003160.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 2778700..2779131 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_003160.2CDS:Ec-27_003160.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 2779132..2779473 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0031605UTR:Ec-27_003160.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 2779474..2780409 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_003160.2 ID=Ec-27_003160.2|Name=Ec-27_003160.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=114bp
MLDWFQRLMDNITGMICTGHAHAVYGRTIVHLPLPSRGMRRSRDRRRSRT
RRTAVALTTRTLGGASTHVTVGHWFWREVRGTCCQRVDYVVSTGIARICP
AGFNGGPLGWSCV*
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spliced messenger RNA

>Ec-27_003160.2 ID=Ec-27_003160.2|Name=Ec-27_003160.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2315bp|location=Sequence derived from alignment at chr_27:2778700..2786675- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCCCGGAACAAGCCAGCACGGAAAAGCCAGCTGTCTTGTAGTCAGCAGA
GAGAAGCCGATCCGTGATTACACAGCACTGCTGCTCCCACCTTCACCTTC
CCACACCATTATGTACGATGGTTTTGAGACGCTGTTCGTGTCTTTCCCAG
CGCGATACGTTCTACACGTACAGATAAATCGACCGAGCAAGAGGAACGCC
ATGAACGCAAAGTTTTGGATCGAGTGTCGGGATTGCTTCCAGCTCATCTC
GGAGGATGCCGACGTGCGGGCGGTTGTGGTGTCTGGGATGGGCGACCACT
TTTCCGCGGGATTGGACCTGTCCGACACGACCAACTTCGACGCCATCGGA
AGGGCCACGAAGGACGTCGCTCGTCGAGCGTTTCGTTTCCGAAAGCTTGC
TTTGGCGATGCAGGAGTCGTTTACGGCCGTGGAGCGGTGCCCCCAGCCCG
TGATCGCGGCGATCCACGGGGCGTGCGTGGGAGGAGCGGTGGACTTGGCT
TGCGCCTGCGACATTAGGCTCTGTTCTGAGGACGCGGGATTCTGCGTCGC
TGAGGTCAAGGTCGGCCTAGCGGCGGACGTGGGGACGCTACAACGAATGC
CCAAGATAGTGGGCAACGAGTCGCTGTGCAGAGAGCTCGCCTACACTGGA
CGGACGTTCGGAGCGGCCGAGGCATCACGCATGGGGTTTGTCTCCCGTGT
CGTCGCTGCCCCCGAAGCAGCAACCGTTGCCGCCGCCGCCGCCGCCGCCG
CCGCAGCTGCCACGGCAGGTGGTAAACCGCGTGCCGTGGCGGCGTCGGCG
GCGTCGGCAGGAGTATCACCCCGTCGCTCCCAACGAGCAGAAGTCGTCGC
CGCCTCGATTCTGACGGCCTCGGAGATAGCCAGGCAAAGCCCCGTTGCCG
TCTTCGGCACCAAGCGTAACCTCCTCTACGCGCGGGACCACAGCGTCGTT
GATGGGTTGGAGTATGCGGCGACGTGGAGCGGGGCGGCACTCCAGGCCGG
GGATCTGAGCACGGCCATGCGTGCGGCGGCTGGAAATCCGAAACGAAGTG
GTAGGAGAGAGGCGGGAGCGGGAGCAGAGGCGGGTTCGCACCCGCATTTT
TCGAAATTATAGCGGTCTGCGGCAGGGGGGTGGGGGGGGTTGCCGCAAAG
GCTCGAGGGTCAAGGAAACAGGGCGAAGCGGCGGCGAAGGCATTTAATTC
GTCGGGTGTACAAGTTTTACCGAAGGGGGGGAGCATGGTTGTGGTTGATT
GTCTCGATCTTTGCACTGCCGTACGTCGTGTTGCCCAGCGTATATGGTGT
TTTGCGTTTGTGTGCCTTGCCCGTGTTGATGCGGCAGTGATGATACGGTC
TGAGGCACCATGCGCATTTTTGTATTTTGGAATACCGTAAGTAATAGCTC
GCCGGGAGTATAAATTGGTGTATTGTTATCCCACAACTGTGTTCATCATC
AGCAAGGTGTGGGCGATCGGTGAATGCATGAATGATAGTTACGAGGGATA
TTTGTCGTCTGCGCTACGGGTGAGGGTGTGTTTGTTGATCAATGTTGGAT
TGGTTTCAGAGACTAATGGACAACATCACAGGAATGATTTGCACAGGGCA
CGCTCACGCTGTGTATGGACGCACTATCGTCCACCTACCCTTACCTTCCC
GGGGAATGAGGAGATCAAGGGATAGGAGGAGGAGTAGGACGAGGAGAACG
GCCGTAGCGTTGACCACCAGAACCTTAGGGGGTGCATCAACGCATGTCAC
TGTGGGCCACTGGTTCTGGCGTGAGGTTCGCGGTACCTGTTGTCAACGTG
TAGACTATGTAGTATCAACGGGTATCGCACGGATTTGTCCTGCTGGTTTT
AACGGAGGCCCGCTTGGCTGGTCCTGTGTTTAGGTTTGGCTTGACTTATT
TGACCTTCAGTAGAACTCTTTGGCTACATTCACGAGATCCTTCAGGGTCA
GGGCCGAGCGTTGCTTCCTATTTTGCATCTGGGCGAGGAACGAGGTGAGG
GCCAGCTTGTTTCTGCTGGAGAGGAGCAAGGTTGGCGGGGTACTGTAGTT
TTCCGGGTGATGGGTGAAGTGAAGGGAAGGGAAGAGATTGTTGGTTGGTC
CTGCGAGCCGCGGCTTTGCGTTACTTGAGTGTTGGGGCGGGGTGCGTGTG
TGTATTGTCGAAGGTGTACGTCCGCGTGACAGCAGGGAAGGGGGAGCCGG
TCAGGCAAGGGCAGGTATGGAGGGGCATCGGATGGCACCCTTCGTCTTCA
CTCTGGAGGGTCGTGAGATGGACGGAGCCATTCCTAGTCGGTGGATGCCA
AATGATGATCTAATC
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protein sequence of Ec-27_003160.2

>Ec-27_003160.2 ID=Ec-27_003160.2|Name=Ec-27_003160.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=114bp
MLDWFQRLMDNITGMICTGHAHAVYGRTIVHLPLPSRGMRRSRDRRRSRT
RRTAVALTTRTLGGASTHVTVGHWFWREVRGTCCQRVDYVVSTGIARICP
AGFNGGPLGWSCV*
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mRNA from alignment at chr_27:2778700..2786675-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_003160.2 ID=Ec-27_003160.2|Name=Ec-27_003160.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7976bp|location=Sequence derived from alignment at chr_27:2778700..2786675- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCCCGGAACAAGCCAGCACGGAAAAGCCAGCTGTCTTGTAGTCAGCAGA GAGAAGCCGATCCGTGATTACACAGCACTGCTGCTCCCACCTTCACCTTC CCACACCATTATGTACGATGGTTTTGAGACGCTGTTCGTGTCTTTCCCAG CGCGATACGTTCTACACGTACAGATAAATCGACCGAGCAAGAGGAACGCC ATGAACGCAAAGTTTTGGATCGAGTGTCGGGATTGCTTCCAGCTCATCTC GGAGGATGCCGACGTGCGGGCGGTTGTGGTGTCTGGGATGGGTGAGTTGC TCAGACTCGATGAGCACGAAAAGGCTGAGCAAACAATATCATGTACATGT CGCTTTTGTTGTCATGAACTTGGGGCTCGCAAGAAGAAAATAAATCGCCT CCACCATTTTGTCGCGTTTCCGCCGCAGCGCATGTTGTGGCAGCGTTGCC GCACCCCTCTTTTACAGCTGCGTCAAGAAGCGTCAGCTTCGATGTCTGCA TGTCGCACTCACTACTTTAGGCAGCCACCTGCTGCTTTGCAACTTTCAAG GATTACAAGCAGTGTGACAATTGCAGCATTGGCGTGGGGCCATTTGGGAC ACACTTCAGATATCAACAGGGCATAGCAGCGGGGGGGGGGGTTGGCGAAC GAGATCATGTGTCATGTACCGGACGTGTGCTTCCTCACAACGGCCGTGAT ATCAATGTAGCCTTCAATGTCACGAGAGTGTGCAAAGAAGTTGGCACTAC CTGCATATGTGTTTTGATCCCTGACAACTTAGACGAGGGGAGACCCCTTA TACATCTGTACCGCAGTGTCACTTTCTAGTCCGCCGATATCCGAGGTCTG CACTGGCATGAACGGGGTGGGTGCATGCCGGTTATCTGCGGCGATTTTAC CAGGGGGTGAAAGGCCGGAAGGCCGCGGTGTATCATATTAACTACAGCAG TATATACTCACAGGATGTCGTCGTCAGACATACGACTTGATTTTAGTGTA CACCAAAGTTAGGTGCCGTTTTTTTTTTTTTGCATGCCGCACAGCAGTTG CGTTGCGACGAAATGCCTAGGTTTGTGGCCACCATACATATGTATGTCTC ACGAACTTCGTGCAGCAACGACGACTTGTATCGAACCTTAAGGTGCCCTC GTCACACCCTGTCATGAGTGCACTTTTCGACGGCTCACGTTTGTTTTTAG TGTTGTTTAGATGTTGTGGCGACCACGTGCTCTTTCTGCGTGTACACCAA ATTGGTGCCGTCTGTATTTTATTCGTGCCACGCAGCATGTGTTGCGACGG AATGCCTGCGTCGAGGCCACCACATGTCGAACGAAATTTGGTGCAGCTAC GATAGGGTGTACTGCACCCTTGCGTGCTATCGTCACACCGTGTCATGGGT GCACTTGACGACGGTTCACGTTTGGGGTTGACGTTGTTTGAAAGTTGTTG CGACCACATGTGTGCGGCACCGATCACGAATGAATATGTACGTATTCGTC TACGGCATGTCGCTTTGCAACCCCGACTTCACTCCTGTCAAACTCCTATC ATCTACTGCTTTACTGTAGTGTACAACAACACCCAGTTTCGAACCGGAGT GCAGATGCTGCCTGCAGCGTGACCTTGCTGTAAACCAGGATAGAGTTCAC CCACAACTACAACCTCGAACATCACCTCTGTCTGCCCACCTTGCAGCGGT AATCATGACAATCTATTTACATCCAATCTCGTCACAAAGAACAACTTACA TCCACTACTGCTGGCTCTACAGCATTGCACGCCCGCCGGCCCTCTATTAA AATACTTCGTGCTACCGCTACAATACACCTGTCATGAGTGCACTTGACGG CGGTTCACGTTTCGTTATAGTGTTGTTTTAACGCTGTGGCGACCACGTGC TGCGTGTGGCAGCCATCACGAATATGTACAGCAGTGCAGTTCGTCCACAT ACGTCACGTGTCGCGTGCGTTCTGCAACACCGACTCCACTCCTGCCAAAC TCTTACCTGAACTACTGCCACACTGTTGTTGTAGTGTACGATAACACGCA GCTTCGAACCGGCGTAGAGATGTGGCCTGGTGTCCTTGCTAGAAACCGGC ATGGAGTCTACCCACGTTTACGTGCAACCTCGAACACGACGTTTGGTCAC CTCTGCTCCGCGGTAATCATGCCAATCTCCTCAGAAAACACTATTTGCAT CCGCTGCCGCTGACTCCGCTGGCTCTACCTACAGCACTGTACGCCGGGCT TCAATCTGCCTTATTCGAAACTGTTCCTGCACAGAGTCTGTGCTATCCGT ATTACTTCTGTTTTGTGACTAAAATGTATGCTGCTTGACTGCATGCGTGC GACACCGGCTGAAGATTCTGTGAGACGGATCCATCACGTACATGTAAATC ATGCTATGTAATCTAATGGTCACAGGCATCATTTGAATTCCCCGCGGTTG GCACTACAACACGTTCCGCAACCCCCGCCTATGTACTCCACCCGTTGCTT CTGCCGTTCCACCCTTTGTATCTTCTGCCGTCCTACATTTTCGACCCACA TTTTCGACCAAGTAGACTTGACATCCACCACTCACTGCTGGCTCTGAAAC ACTGCACGCCGGCCTTCGTCTGCGATATTTTGCATCAGATCCTCCGACAT CTATCATCACAAGCATCACACTGTCCACACCTACCTGGTGCTATAATCAT GCCATGTAATCTGCATAGATAGTCTAATCGTCACAAGCATGAATATTTGA ACACCGCTGTCGGCACTACAACACGTTCCGCAACCCCCGCCTACTCCACC CGTTGTATCTTCGACCGTCCTACATTATCCACCCACCACATCTTCGTCGG GGCCGACATTAATAGATACGATAAATATATATGGGGGTGTTTGATTTAAG GGCGCGGGGGGGATCGCAGTACCTCCTCTGAAAAACCCAGGAAACGCCTG CATATCTCGGTTTTCCAAAGTCTAACTCCAGTACGAAACTACCATCGTAA ATTAACCGTCCGCAGCGGTCGCTTGTGTACAATGTTAGCAGCTGAGATTG TAGGCCTTTCGATACACTACAGACTAGCGGTCCGCGATTTTCCAAACGAT CCTTCTATCATCGAGTTCGGTGAGCTACAAGCTAGATTTTTGAAGCTGCT GTGCGGTCCAATTTTGAAACGCTTCAAGCACCTTTGCCTAAAGGCTGGAC ATGCATATACATGACCCTAGGCAGTCAAATCGACAATGGCGACCAGCTGG ATATGTGAGGGAAGAGCTGCGCTGAAGTTCGCGGCCCCATACACTCACAT AGGCGGTGATTCGTGTTCACCGTGTGCTTGAAGCGTTTCAAAATTGGACC GCACAGCAGCTTCAAAAATCTAGCTTGTAGCTCACCGAACTCGATGATAG AAGGATCGTTTGGAAAATCGCGGACCGCTAGTCTGTAGTGTATCGCAAGG GGTACAACCTCAGCTACTAACATTGTACACAAGCGACCGCTGCGGACGGT TTATTTACGATGGTAGTTTCGTACTGGAGTTAGACTTTGGAAAACCGAGA TATGCAGGCGTTTCCAGGCGTTTCCTGTTTTTTTTAAGAGGAAGTACTGC GATCTCCCGTGCGCCCTTAATTAATTGTTTTTGGGTTTTAAATTTTTGGG TTTGGGGAGTACATATCAACGACCGCCTGGCTAACAACGCAAGTATTACT CATTGGTTAACACATACGTACCCCAAATTCCGTTGTATCTGACTGCCACA ACCAACGACACGCACGCGTATTTGTTTTTCTCTTCGAGACTTCGCGCCAT GCCCGGACCCATGCAGCAGCCAACAATTAGTTGTGGTCTACGCAGTGGAC GTTTCACATCCTCCACTATCGTCTGCATTTCGGACGCGATTCACTCCATT ATGGAGAGACAGTATAGTCGACGCCGAAATCCCGTCATGATACTGTCCGA CATTCATCCGCCATCCATCACTAGTGTCTTGCCACGGGAGTCTGGCCACC CGCCGCATGGGGGGCGGGGGGCCAATCGTTGCCCCTAGTATACCATACGC AAAGCCCTCGCATTTATCACCCGAAATTCGAAAAGGCGAAACACCACCAA ACAATCACGGCAACAAAATTGTCACACCCGCACCTACCCGCGACTGACTC TTGTAGCTCTCGTCGTGCGTACCCTCTTCGCCTTCACCACAAACTACGCA ACAGCCCCACGACACGACAACAACAAAACGCCGTTCCTTTGGTTCCCCGT CCTCTTCTTGAATTGCCCAACAGGCGACCACTTTTCCGCGGGATTGGACC TGTCCGACACGACCAACTTCGACGCCATCGGAAGGGCCACGAAGGACGTC GCTCGTCGAGCGTTTCGTTTCCGAAAGCTTGCTTTGGCGATGCAGGTACG TACGTAGTTTTTGCTTGGTTCGGACGTTCGTCGGCTCGAGTATGTAGATG CTTCTAATATTGCCTCCGATTTGCGTACGGCCTTCGTCAAACGTTGCCCC CTGCTCTCACCATTTTGGCCTATTCGTGACAATTTGTGAGAGGTATACAC CCACAGCAATCAAGTCGTTTAGAGAATGTGAACATATACATATGCGTACC TTTAGATAGAGAGAAGGCGAAGTCCGCGTCTGCCACAGAAAGGGGCCTTG TTTTTTCTTCGCACATGGACGGGTGGACTTTCCGTTTTCATGTCTACAGC AGTACCACAATATGGGTTTTCGTTGCGAGCGCCGACGTTCGATTTTCCTT CAAGGGGCGGGGCCGAGAAGGTAGTGAGTAGAGGTCAATACTTTTTGTCT TTTGCCAGACCACATCAACAGTTCATGGACAATATCGACTCACTTGTTTC CGGGATAATTTTTCTGCCTTGTACAATGTAGGCGCGAAGGGTTGTTGTAT CAACGAACCGCTGTGGTATGTTATTGCGACCAATTGTTTGTTCAGGCGCC CCCTTTGTCTAGGCAGCGACAGACAATATCCTTGCCGGCAGTGGGCAAGC CAGAAAGCAAAATTTCTCCTTATCCGAACGCTGCTACTGCTGCCTTCTGT GGCCAAGAAAGTATGGTACCCGAGCCCACGTTACTCACAAGCCATTCTTG GGATGCATCTTGCCGTGCGTGTATTTGCCGAGCGAGCTGCAAACTCCCAC TACAACAATTATGCCGTCGCGCTTGGCAAGATCCCTGCTACCTTTCTTTT CGACAGACGACATCCACTGCTCTGCCATGGCTTTGTAAAAGGGTGCGGTT AGTGCTCCGTCTCGGAGATGGAAGTGCGCGATTTGAAGGCATCGTCTCCA ACATTTATAGACGTAGACGTAAACAGCAAGCGCCACGTTGTAGATTTGAT CCCCCTCCCCCCCCCCCCCTGCCTTCTTCAATTTCCACGGTGGTATCAAT GCAGGTAAGAATGTGCTAACCCTCCTTTTCGAGAGGGATAGCACAGGTGG TCCTTGGTCGATGGTTAAACACCCACCTAAGGCAAGCAACAAGCAGGCCG CCCCGGCGACGCCACCCTTGCCTCATACTTCTACAACGCAACAAAAGTGA AGTACCCCGCTCCACTCCATTCCGCGTCTCCCCACCACCGTCAATCCAAC CAACCAACGTTGCCCGACTGAAACTCAGGAGTCGTTTACGGCCGTGGAGC GGTGCCCCCAGCCCGTGATCGCGGCGATCCACGGGGCGTGCGTGGGAGGA GCGGTGGACTTGGCTTGCGCCTGCGACATTAGGCTCTGTTCTGAGGACGC GGGATTCTGCGTCGCTGAGGTCAAGGTCGGCCTAGCGGCGGACGTGGGGA CGCTACAACGAATGCCCAAGGTGTCCCTCTTGACTTTGTCAGCTGCACCA TTTTGTTTTGTGCTGTTTTCATATACTTTTTCGTGCCTGAATTTCCAGAG CTCAACATGTGTAGTGCGTGTCCAAAGACCACATTTATACACGTTTTCAA AGGACCGTATACTGCAACGAATACGATTACACTGTGCGTAAGGCCAACGA GACAGATGTTTTTGTTGCCATCGCTTGTCTCCTTCGGTCTGCTGGCGGGA CTGCCTGTCGGGGGCTCATCGATTGACCGAAACAACAGAACAATGAACGA AACGTCATCGACAACGCCAACACCAATAACACCGACAACACCGACAACAA TCTTCACACACACACACACACACACAAACACAACACACCACCACCACCAC CACCCTTGCATGAAAGCTGAAACGCTAACGTCATACATCACAACTGACTA AATAACAACACCGCAGATAGTGGGCAACGAGTCGCTGTGCAGAGAGCTCG CCTACACTGGACGGACGTTCGGAGCGGCCGAGGCATCACGCATGGGGTTT GTCTCCCGTGTCGTCGCTGCCCCCGAAGCAGCAACCGTTGCCGCCGCCGC CGCCGCCGCCGCCGCAGCTGCCACGGCAGGTGGTAAACCGCGTGCCGTGG CGGCGTCGGCGGCGTCGGCAGGAGTATCACCCCGTCGCTCCCAACGAGCA GAAGTCGTCGCCGCCTCGATTCTGACGGCCTCGGAGATAGCCAGGCAAAG CCCCGTTGCCGTCTTCGGCACCAAGCGTAACCTCCTCTACGCGCGGGACC ACAGCGTCGTTGATGGGTTGGAGTATGCGGCGACGTGGAGCGGGGCGGCA CTCCAGGCCGGGGATCTGAGCACGGCCATGCGTGCGGCGGCTGGAAATCC GAAACGAAGTGGTAGGAGAGAGGCGGGAGCGGGAGCAGAGGCGGGTTCGC ACCCGCATTTTTCGAAATTATAGCGGTCTGCGGCAGGGGGGTGGGGGGGG TTGCCGCAAAGGCTCGAGGGTCAAGGAAACAGGGCGAAGCGGCGGCGAAG GCATTTAATTCGTCGGGTGTACAAGTTTTACCGAAGGGGGGGAGCATGGT TGTGGTTGATTGTCTCGATCTTTGCACTGCCGTACGTCGTGTTGCCCAGC GTATATGGTGTTTTGCGTTTGTGTGCCTTGCCCGTGTTGATGCGGCAGTG ATGATACGGTCTGAGGCACCATGCGCATTTTTGTATTTTGGAATACCGTA AGTAATAGCTCGCCGGGAGTATAAATTGGTGTATTGTTATCCCACAACTG TGTTCATCATCAGCAAGGTGTGGGCGATCGGTGAATGCATGAATGATAGT TACGAGGGATATTTGTCGTCTGCGCTACGGGTGAGGGTGTGTTTGTTGAT CAATGTTGGATTGGTTTCAGAGACTAATGGACAACATCACAGGAATGATT TGCACAGGGCACGCTCACGCTGTGTATGGACGCACTATCGTCCACCTACC CTTACCTTCCCGGGGAATGAGGAGATCAAGGGATAGGAGGAGGAGTAGGA CGAGGAGAACGGCCGTAGCGTTGACCACCAGAACCTTAGGGGGTGCATCA ACGCATGTCACTGTGGGCCACTGGTTCTGGCGTGAGGTTCGCGGTACCTG TTGTCAACGTGTAGACTATGTAGTATCAACGGGTATCGCACGGATTTGTC CTGCTGGTTTTAACGGAGGCCCGCTTGGCTGGTCCTGTGTTTAGGTTTGG CTTGACTTATTTGACCTTCAGTAGAACTCTTTGGCTACATTCACGAGATC CTTCAGGGTCAGGGCCGAGCGTTGCTTCCTATTTTGCATCTGGGCGAGGA ACGAGGTGAGGGCCAGCTTGTTTCTGCTGGAGAGGAGCAAGGTTGGCGGG GTACTGTAGTTTTCCGGGTGATGGGTGAAGTGAAGGGAAGGGAAGAGATT GTTGGTTGGTCCTGCGAGCCGCGGCTTTGCGTTACTTGAGTGTTGGGGCG GGGTGCGTGTGTGTATTGTCGAAGGTGTACGTCCGCGTGACAGCAGGGAA GGGGGAGCCGGTCAGGCAAGGGCAGGTATGGAGGGGCATCGGATGGCACC CTTCGTCTTCACTCTGGAGGGTCGTGAGATGGACGGAGCCATTCCTAGTC GGTGGATGCCAAATGATGATCTAATC
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Coding sequence (CDS) from alignment at chr_27:2778700..2786675-

>Ec-27_003160.2 ID=Ec-27_003160.2|Name=Ec-27_003160.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=342bp|location=Sequence derived from alignment at chr_27:2778700..2786675- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGGATTGGTTTCAGAGACTAATGGACAACATCACAGGAATGATTTG
CACAGGGCACGCTCACGCTGTGTATGGACGCACTATCGTCCACCTACCCT
TACCTTCCCGGGGAATGAGGAGATCAAGGGATAGGAGGAGGAGTAGGACG
AGGAGAACGGCCGTAGCGTTGACCACCAGAACCTTAGGGGGTGCATCAAC
GCATGTCACTGTGGGCCACTGGTTCTGGCGTGAGGTTCGCGGTACCTGTT
GTCAACGTGTAGACTATGTAGTATCAACGGGTATCGCACGGATTTGTCCT
GCTGGTTTTAACGGAGGCCCGCTTGGCTGGTCCTGTGTTTAG
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Synonyms
The feature 'Ec-27_003160.2' has the following synonyms
Synonym
Esi0000_0579
Esi_0000_0579