Ec-00_007460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007460.1
Unique NameEc-00_007460.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length250
Homology
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 495 bits (1275), Expect = 4.200e-177
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
Query:    1 MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
            MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR
Sbjct:    1 MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 249          
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.360e-75
Identity = 120/186 (64.52%), Postives = 145/186 (77.96%), Query Frame = 1
Query:  190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
            VEAG DV+MSDADALWL DP KDF+LP V+ SS+VASRG FP  +G  WGAT+CMGF+LFR T  RV + EF+ VM+ALV + KDDQI+VN+AA +LGIVW+QE SDMRY ES  FG G ID+L D++NQPF+VTLLPH+AYTR+C  TP+SN TVVAHC + KT  SK  WM +  LW  D +TR
Sbjct:  137 VEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRV-VGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQE-SDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 320          
BLAST of Ec-00_007460.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 3.950e-52
Identity = 129/326 (39.57%), Postives = 156/326 (47.85%), Query Frame = 1
Query:   85 DLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQV--------------------------------------------------------------------------EAGH-DVMMSDADALWLADPMKDFSLPGVVG-SSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVA-MREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQ----------------------------PFTVTLLPHSAYTRICASTPVSN-TTVVAHC-ISSKTPQSKADWMHRMDLWAVDED 741
            ++  LE LPAI+ +A C DWAAW+PP S P VVMQV                                                                          E G+ DV+MSDADALWLADP KD    G  G   IVASRGS+P +    WG+T+CMGFILFR  A  VA M+ F+ VM  LV++ KDDQI+VN AA+ LGIVW++  SDMRY ESTG+G G I  L   +N                             PF VTLLPHSAYTR+C    +SN TTVVAHC    K    K  WM + +LW+V +D
Sbjct:   20 EIYDLETLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFR--ARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKN-SDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDD 342          
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 8.060e-46
Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 1
Query:  190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
            + AG DV+MSDADA+WL DP  DF+    + S++VASR   P  + H WGAT+CMGF  FR   S  AM+ F+TV+  +V E  DDQ AVN A   LG+VW+   SDM +T ST  G G I++++ + + P  VTLLPH+ YTR C  TP+SN T+VAHC+SS   +  A WM    LW + +D
Sbjct:  163 LNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGS--AMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPT-SDMDFTNSTRPGTGVIENITANGD-PLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 342          
BLAST of Ec-00_007460.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.270e-44
Identity = 89/187 (47.59%), Postives = 122/187 (65.24%), Query Frame = 1
Query:  181 VMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
            V  ++AG DV+MSDADA+WL DPM DF       SSIVASRG+ P  +   WGATICMGF+LFR  ++  A+ +F+ V+     E ++DQ AVN+A + L +VW+   SDM +++ST  GVG ++S+   ++   TV+LLPH+ YTR C  TP+S  TVVAHCIS+   +  A WM    LW V +D
Sbjct:  218 VCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSN--AIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPT-SDMSFSDSTRSGVGVVNSIYSGES--LTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPDD 399          
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.780e-43
Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 1
Query:  190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
            + AG DV+MSDADA+WL DP  D +    + S++VASR   P  + H WGATICMGF  FR   S  AM+ F+TV+  +  E  +DQIAVN A   L +VW+   SDM +T++T  G G I++++ D      VTLLPH+ YTR C  TP+SN T+VAHC+SS   +  A WM    LW + +D
Sbjct:  238 LNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGS--AMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPM-SDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 417          
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.300e-41
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 1
Query:  193 EAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAV 459
            EAGHDV+MSDADALWLADPMKDFSLPGV+ SSIVASRG  P EVG VWGAT+CMGFILFR TA+R AM +FVTVMNALV E +DDQIAV
Sbjct:   60 EAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 4.240e-18
Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 1
Query:  190 VEAGH-DVMMSDADALWLADPMKD-FSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVA-MREFVTVMNALVLEEKDDQIAVNIA 468
            +E GH DV+MSDADALWLADP KD FS  G     I+ASRGS+P E    WG+T+CMGFI+FR  A  VA M+ F+ VM  LV++ KDDQ+    A
Sbjct:   79 LEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFR--ARNVAGMKRFLDVMADLVVQNKDDQMLCECA 172          
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A2J7TK26_METSI (Nucleotid_trans domain-containing protein n=1 Tax=Methylocella silvestris TaxID=199596 RepID=A0A2J7TK26_METSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.480e-8
Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 1
Query:  196 AGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGS-FPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDS--LSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
            AG D++ SDADA+WL DP+   +      + +V ++G+ FP E     G  +C G +  R+ A  +   EF   +  + ++ +DDQ AVN        VW   D   RY E+  F   F  S  +     +   + +LPH  + R+     +     VAH ++      K D +    LW VD   R
Sbjct:   80 AGDDIVHSDADAVWLRDPLARLT---ATSADLVFTQGTVFPSETLQRRGFVVCCGLMFIRSNAGAI---EFWRNVRDVAVDVRDDQWAVNKVIDQSDCVWTLTD---RY-EAPCFDTVFHASRFIITGSMKDLAIEVLPHHEFPRLME---LGENPFVAHPLADSPIDDKIDVLSESGLWFVDRPPR 253          
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A7S2LCA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LCA9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.370e-7
Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 1
Query:  205 DVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFP-----------GEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFT------------VTLLPHSAYTRICASTP-VSNTTVVAHCISS-KTPQSK 696
            +V+ +DADA+WL DP++ ++ P    S+IVASRG++P            E  H+   TIC GF  FR +     + +   + NA+     DDQIA+N     L + ++  D D+   + +      I + +  D                 V++LP+   TR C     +   +VVAHC +  K  QSK
Sbjct:  147 NVLYTDADAIWLKDPVQLYNHPQHQSSNIVASRGTYPEWCPLAMELHDDEKMHLNTVTICFGFTYFRNSPDLHQLAQ--NLQNAVARYRNDDQIAINCV---LNLQYDSND-DLHMNDPSS-----IAAFTQPDKSVIRSFFGKVIAHNIKVSILPYEQVTRRCGRDEGMLENSVVAHCYTDLKEGQSK 324          
The following BLAST results are available for this feature:
BLAST of Ec-00_007460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G4E2_ECTSI4.200e-177100.00Nucleotid_trans domain-containing protein n=2 Tax=... [more]
A0A6H5LI82_9PHAE8.360e-7564.52Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI3.950e-5239.57Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE8.060e-4648.37Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LSV3_ECTSI4.270e-4447.59Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI1.780e-4346.74Acetyltransferase (Isoleucine patch superfamily pr... [more]
D7FQM0_ECTSI3.300e-4182.02Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5JTX9_9PHAE4.240e-1856.25Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A2J7TK26_METSI2.480e-828.34Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A7S2LCA9_9STRA7.370e-729.10Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11974658..11976582 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.2
Seed ortholog evalue2e-63
Seed eggNOG ortholog2880.D8LSV4
Length750
Hectar predicted targeting categorysignal peptide
Gene idEc-00_007460.1
EggNOG free text desc.Nucleotide-diphospho-sugar transferase
EggNOG OGs2C6NG@1,2SGR5@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007460Ec-00_007460Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11974505..11978751 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007460.1.3Ec-00_007460.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11974658..11974951 -
Ec-00_007460.1.2Ec-00_007460.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11975153..11975419 -
Ec-00_007460.1.1Ec-00_007460.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11976394..11976582 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007460.1CDS:Ec-00_007460.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11974658..11974951 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007460.1Ec-00_007460.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11974658..11976582 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=250bp
MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAA
WVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVAS
RGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQ
IAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLL
PHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR*
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spliced messenger RNA

>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=750bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCTTCTGCAACTCATTTGCTGGAATGGCGGCGATGGCGATCGTGAC
ATCCTCCGCAACGACGGCGAAAAACGTGTCTCTCGACCTGTTACCTTTGG
AACCGCTGCCGGCGATTTCGCCGGAAGCAGTGTGCGCTGACTGGGCGGCC
TGGGTTCCCCCCATGTCGGGCCCCACGGTTGTGATGCAGGTGGAAGCAGG
TCATGATGTCATGATGTCGGATGCAGATGCCTTGTGGCTGGCGGACCCCA
TGAAAGACTTCTCGCTCCCTGGCGTTGTCGGCAGCAGCATCGTTGCATCT
AGGGGAAGTTTTCCGGGAGAAGTTGGTCACGTGTGGGGCGCAACCATATG
TATGGGTTTCATTTTGTTTCGAACGACTGCGAGCCGCGTCGCCATGCGAG
AATTCGTCACCGTCATGAACGCGCTAGTGCTCGAGGAGAAGGACGACCAG
ATCGCGGTGAATATAGCGGCGCGAGACTTGGGGATCGTGTGGAACCAGGA
GGACAGTGACATGCGCTACACGGAAAGCACTGGTTTTGGTGTGGGGTTCA
TCGATTCGCTTTCAGATGACGACAATCAACCCTTCACTGTGACGTTATTG
CCTCACAGCGCCTACACACGCATCTGTGCGAGTACGCCCGTTTCGAACAC
AACCGTTGTGGCTCATTGTATATCGTCGAAAACACCTCAAAGTAAGGCTG
ACTGGATGCACAGGATGGACCTCTGGGCAGTCGACGAAGATACCCGCTGA
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protein sequence of Ec-00_007460.1

>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=250bp
MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAA
WVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVAS
RGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQ
IAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLL
PHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR*
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mRNA from alignment at chr_00:11974658..11976582-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1925bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCTTCTGCAACTCATTTGCTGGAATGGCGGCGATGGCGATCGTGAC ATCCTCCGCAACGACGGCGAAAAACGTGTCTCTCGACCTGTTACCTTTGG AACCGCTGCCGGCGATTTCGCCGGAAGCAGTGTGCGCTGACTGGGCGGCC TGGGTTCCCCCCATGTCGGGCCCCACGGTTGTGATGCAGGTATGTACGAG AAAGTGGACTCTCGTCATCCCACAAATGATGATACTCCCGCAATTTTGTC GTCGCTTGGACGTTTAGTTGTCGATCGGTCAGGTTAGATCATGGCTGAAA TGATGGAACCACAACATCCTGATTGGACTTGCCGTGTTGACAGCGTGTTT CACGGTGGTGGAGTTGTCCTTCATTTATGAACCGATCACTTGGAAACCAG ACCATTGTGCTTATCAATCCGCCAGACGGTACGAAGCGAGGCGAAACTCA CACGATACATAGCGACCACAGGGTTTGTCCTGCTGTCGTGCTGCTACAAT ATTTTTGTCCCTTCGTGCCCTGCTATGATTGAAGCAATTCAAAAGTTCGA CTTTGCGCCTGCCCAGGTAGTGAGCGGAACGTATATCGATGTGGAGCGCA ACTTCATCTATTGGATGGAGCTCAGGACTTCATTCACTCGCAACGACCTC TACCTCTTGTGCTTGGACGACGACTCTCTCCATTTCTTCGAATCTTCCAT GGGGATCCGTTGCCTTCCTCTTAGCAGGCTCAACATAAAATCGCACGCGG AAATCTGGGTAGTTCGCGTCCGCGTGCTATCTTGCTTGGTAAGCAGGGCG TGTCGTGGGCGTGGACGAATGGAAAATTTCCTGAAGGACATGATCTAGAG ACGCGACAAAAAATTACCGTGGCTGCCGAAATTGCAAGCACTTGGTGTTG AGAACAAGCTGTTCACCTACCTCTGCATTTTTTGGCCGAATTCGTTGTTT GCCGCTGCACCGAGTTATCCATAGAACGATCAACCCAGGAACAGATGGTA TGATCCTGCAGAAAAGCAATTTCGCAACGGAGGCGTAATTTTACGGAAAG GAAGCGCTCCGCGATGCTGATGACCCGGCAATGAGCGAGCCTCGTGTTTA TGCCGTGAATCTGACTCCACACGTACCGTCTCGACTACCCCCGCCCGTCG ACGATCGTCTCAGGTGGAAGCAGGTCATGATGTCATGATGTCGGATGCAG ATGCCTTGTGGCTGGCGGACCCCATGAAAGACTTCTCGCTCCCTGGCGTT GTCGGCAGCAGCATCGTTGCATCTAGGGGAAGTTTTCCGGGAGAAGTTGG TCACGTGTGGGGCGCAACCATATGTATGGGTTTCATTTTGTTTCGAACGA CTGCGAGCCGCGTCGCCATGCGAGAATTCGTCACCGTCATGAACGCGCTA GTGCTCGAGGAGAAGGACGACCAGATCGCGGTGTGTATGTTGTTTGTTTT TTTACGCCTTTTTCGTGAGAGCCAGATACTTGGGTGCAAACATGGACAGG ATAGTTCAGCGCTGTTTCCTTGTTGCTTGCGCCAGTTTGTGTTTTGAGTC ACGCGTTGCATCGCAGTGAAAAGCTGTATCTTCATGAATGATGATGGCCC TACCAACGGCTACGGACTGCACTCGCCTCAGGTGAATATAGCGGCGCGAG ACTTGGGGATCGTGTGGAACCAGGAGGACAGTGACATGCGCTACACGGAA AGCACTGGTTTTGGTGTGGGGTTCATCGATTCGCTTTCAGATGACGACAA TCAACCCTTCACTGTGACGTTATTGCCTCACAGCGCCTACACACGCATCT GTGCGAGTACGCCCGTTTCGAACACAACCGTTGTGGCTCATTGTATATCG TCGAAAACACCTCAAAGTAAGGCTGACTGGATGCACAGGATGGACCTCTG GGCAGTCGACGAAGATACCCGCTGA
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Coding sequence (CDS) from alignment at chr_00:11974658..11976582-

>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=750bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCTTCTGCAACTCATTTGCTGGAATGGCGGCGATGGCGATCGTGAC
ATCCTCCGCAACGACGGCGAAAAACGTGTCTCTCGACCTGTTACCTTTGG
AACCGCTGCCGGCGATTTCGCCGGAAGCAGTGTGCGCTGACTGGGCGGCC
TGGGTTCCCCCCATGTCGGGCCCCACGGTTGTGATGCAGGTGGAAGCAGG
TCATGATGTCATGATGTCGGATGCAGATGCCTTGTGGCTGGCGGACCCCA
TGAAAGACTTCTCGCTCCCTGGCGTTGTCGGCAGCAGCATCGTTGCATCT
AGGGGAAGTTTTCCGGGAGAAGTTGGTCACGTGTGGGGCGCAACCATATG
TATGGGTTTCATTTTGTTTCGAACGACTGCGAGCCGCGTCGCCATGCGAG
AATTCGTCACCGTCATGAACGCGCTAGTGCTCGAGGAGAAGGACGACCAG
ATCGCGGTGAATATAGCGGCGCGAGACTTGGGGATCGTGTGGAACCAGGA
GGACAGTGACATGCGCTACACGGAAAGCACTGGTTTTGGTGTGGGGTTCA
TCGATTCGCTTTCAGATGACGACAATCAACCCTTCACTGTGACGTTATTG
CCTCACAGCGCCTACACACGCATCTGTGCGAGTACGCCCGTTTCGAACAC
AACCGTTGTGGCTCATTGTATATCGTCGAAAACACCTCAAAGTAAGGCTG
ACTGGATGCACAGGATGGACCTCTGGGCAGTCGACGAAGATACCCGCTGA
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Synonyms
The feature 'Ec-00_007460.1' has the following synonyms
Synonym
Esi0557_0007
Esi_0557_0007