Ec-00_007460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 495 bits (1275), Expect = 4.200e-177 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
Query: 1 MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR
Sbjct: 1 MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 249
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 239 bits (609), Expect = 8.360e-75 Identity = 120/186 (64.52%), Postives = 145/186 (77.96%), Query Frame = 1
Query: 190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
VEAG DV+MSDADALWL DP KDF+LP V+ SS+VASRG FP +G WGAT+CMGF+LFR T RV + EF+ VM+ALV + KDDQI+VN+AA +LGIVW+QE SDMRY ES FG G ID+L D++NQPF+VTLLPH+AYTR+C TP+SN TVVAHC + KT SK WM + LW D +TR
Sbjct: 137 VEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRV-VGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQE-SDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 320
BLAST of Ec-00_007460.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 181 bits (460), Expect = 3.950e-52 Identity = 129/326 (39.57%), Postives = 156/326 (47.85%), Query Frame = 1
Query: 85 DLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQV--------------------------------------------------------------------------EAGH-DVMMSDADALWLADPMKDFSLPGVVG-SSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVA-MREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQ----------------------------PFTVTLLPHSAYTRICASTPVSN-TTVVAHC-ISSKTPQSKADWMHRMDLWAVDED 741
++ LE LPAI+ +A C DWAAW+PP S P VVMQV E G+ DV+MSDADALWLADP KD G G IVASRGS+P + WG+T+CMGFILFR A VA M+ F+ VM LV++ KDDQI+VN AA+ LGIVW++ SDMRY ESTG+G G I L +N PF VTLLPHSAYTR+C +SN TTVVAHC K K WM + +LW+V +D
Sbjct: 20 EIYDLETLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFR--ARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKN-SDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDD 342
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 165 bits (418), Expect = 8.060e-46 Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
+ AG DV+MSDADA+WL DP DF+ + S++VASR P + H WGAT+CMGF FR S AM+ F+TV+ +V E DDQ AVN A LG+VW+ SDM +T ST G G I++++ + + P VTLLPH+ YTR C TP+SN T+VAHC+SS + A WM LW + +D
Sbjct: 163 LNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGS--AMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPT-SDMDFTNSTRPGTGVIENITANGD-PLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 342
BLAST of Ec-00_007460.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 162 bits (410), Expect = 4.270e-44 Identity = 89/187 (47.59%), Postives = 122/187 (65.24%), Query Frame = 1
Query: 181 VMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
V ++AG DV+MSDADA+WL DPM DF SSIVASRG+ P + WGATICMGF+LFR ++ A+ +F+ V+ E ++DQ AVN+A + L +VW+ SDM +++ST GVG ++S+ ++ TV+LLPH+ YTR C TP+S TVVAHCIS+ + A WM LW V +D
Sbjct: 218 VCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSN--AIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPT-SDMSFSDSTRSGVGVVNSIYSGES--LTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPDD 399
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.780e-43 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 190 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDED 741
+ AG DV+MSDADA+WL DP D + + S++VASR P + H WGATICMGF FR S AM+ F+TV+ + E +DQIAVN A L +VW+ SDM +T++T G G I++++ D VTLLPH+ YTR C TP+SN T+VAHC+SS + A WM LW + +D
Sbjct: 238 LNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGS--AMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPM-SDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 417
BLAST of Ec-00_007460.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.300e-41 Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 193 EAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAV 459
EAGHDV+MSDADALWLADPMKDFSLPGV+ SSIVASRG P EVG VWGAT+CMGFILFR TA+R AM +FVTVMNALV E +DDQIAV
Sbjct: 60 EAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 4.240e-18 Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 190 VEAGH-DVMMSDADALWLADPMKD-FSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVA-MREFVTVMNALVLEEKDDQIAVNIA 468
+E GH DV+MSDADALWLADP KD FS G I+ASRGS+P E WG+T+CMGFI+FR A VA M+ F+ VM LV++ KDDQ+ A
Sbjct: 79 LEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFR--ARNVAGMKRFLDVMADLVVQNKDDQMLCECA 172
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A2J7TK26_METSI (Nucleotid_trans domain-containing protein n=1 Tax=Methylocella silvestris TaxID=199596 RepID=A0A2J7TK26_METSI) HSP 1 Score: 63.9 bits (154), Expect = 2.480e-8 Identity = 53/187 (28.34%), Postives = 83/187 (44.39%), Query Frame = 1
Query: 196 AGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGS-FPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDS--LSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 747
AG D++ SDADA+WL DP+ + + +V ++G+ FP E G +C G + R+ A + EF + + ++ +DDQ AVN VW D RY E+ F F S + + + +LPH + R+ + VAH ++ K D + LW VD R
Sbjct: 80 AGDDIVHSDADAVWLRDPLARLT---ATSADLVFTQGTVFPSETLQRRGFVVCCGLMFIRSNAGAI---EFWRNVRDVAVDVRDDQWAVNKVIDQSDCVWTLTD---RY-EAPCFDTVFHASRFIITGSMKDLAIEVLPHHEFPRLME---LGENPFVAHPLADSPIDDKIDVLSESGLWFVDRPPR 253
BLAST of Ec-00_007460.1 vs. uniprot
Match: A0A7S2LCA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LCA9_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 7.370e-7 Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 1
Query: 205 DVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFP-----------GEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFT------------VTLLPHSAYTRICASTP-VSNTTVVAHCISS-KTPQSK 696
+V+ +DADA+WL DP++ ++ P S+IVASRG++P E H+ TIC GF FR + + + + NA+ DDQIA+N L + ++ D D+ + + I + + D V++LP+ TR C + +VVAHC + K QSK
Sbjct: 147 NVLYTDADAIWLKDPVQLYNHPQHQSSNIVASRGTYPEWCPLAMELHDDEKMHLNTVTICFGFTYFRNSPDLHQLAQ--NLQNAVARYRNDDQIAINCV---LNLQYDSND-DLHMNDPSS-----IAAFTQPDKSVIRSFFGKVIAHNIKVSILPYEQVTRRCGRDEGMLENSVVAHCYTDLKEGQSK 324 The following BLAST results are available for this feature:
BLAST of Ec-00_007460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=250bpback to top spliced messenger RNA >Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=750bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGGGCTTCTGCAACTCATTTGCTGGAATGGCGGCGATGGCGATCGTGACback to top protein sequence of Ec-00_007460.1 >Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=250bp MGFCNSFAGMAAMAIVTSSATTAKNVSLDLLPLEPLPAISPEAVCADWAAback to top mRNA from alignment at chr_00:11974658..11976582- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1925bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:11974658..11976582- >Ec-00_007460.1 ID=Ec-00_007460.1|Name=Ec-00_007460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=750bp|location=Sequence derived from alignment at chr_00:11974658..11976582- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_007460.1' has the following synonyms
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