Ec-00_007380.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007380.2
Unique NameEc-00_007380.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length114
Homology
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BLAST of Ec-00_007380.2 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 9.940e-48
Identity = 341/459 (74.29%), Postives = 352/459 (76.69%), Query Frame = 1 
Query: 1504 DEASARASETPSPDTAETAAVAQXXXXXXXXXXXDTPTEPGTPXXXXXXXXXXXXXGDAAXAATPPQVDEVNGGDATDPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDAQAAKIREARMTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPEKTPPMSFRDARLRDKEGARRARGRIPRA--------LREVGIR*PPGRR*GQGDHRTSAIIVRRHRWWCWERGGGIRPGTRQGRRRLQGRRVKKMNSDPSXXXXXXXXXXXXXXXXXXXGMPGXXXXXXXXXXXXXXXXNMGGGGGGVNINDILSGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMIGKMMNNPKAMEAFQKAQSN 2856
            DEASARASETPSP          XXXXXXXXXXX   TEPGTP    XXXXXXXXXGDAAXAATPPQVDEVNGGDATDPP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDAQAAKIREARMTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 ++   M     +    E     RG   ++         R  GI  PP          +S+                 +       + ++   VKKMNSDPS XXXXXXXXXXXXXXXXXXGMPGXXXXXXXXXXXXXXXXNMGGGGGGVNINDILSGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMIGKMMNNPKAMEAFQKAQSN
Sbjct:  414 DEASARASETPSPXXXXXXXXXXXXXXXXXXXXXXXXTEPGTPAPETXXXXXXXXXGDAAXAATPPQVDEVNGGDATDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDAQAAKIREARMTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEDAA-----------DEVSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAPPP---------SSSXXXXXXXXXXXXXXXXXQDKADAAYKDVE---VKKMNSDPSGXXXXXXXXXXXXXXXXXXGMPGXXXXXXXXXXXXXXXXNMGGGGGGVNINDILSGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMIGKMMNNPKAMEAFQKAQSN 849
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BLAST of Ec-00_007380.2 vs. uniprot
Match: A0A6H5KUZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ2_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 8.530e-31
Identity = 80/107 (74.77%), Postives = 81/107 (75.70%), Query Frame = 3 
Query:  273 QVRTAGVGWARSPIVRPPVIRLSSSSSGDGNDGKEAAGGGGPDALQREIDSIREARMTAGQIKVELDALGVSYVGLLEKAEYVLALAEARVSGGXXXXXQTGPAETG 593
            +VRTAGVGWARSPIVRPPVIRLS                  PDA QREIDSIREARMTAGQIKVELDALGVSYVGLLEKAEYVLALAEARVS G     Q GPAETG
Sbjct:   23 RVRTAGVGWARSPIVRPPVIRLSXXXXXXXXXXXXXXXXXSPDAFQREIDSIREARMTAGQIKVELDALGVSYVGLLEKAEYVLALAEARVSDGGGDGGQAGPAETG 129
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BLAST of Ec-00_007380.2 vs. uniprot
Match: D7G5M8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M8_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 3.160e-24
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 2 
Query: 2198 VSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAPPPSSSGXXXXXXXXXXXXXXQAQDKADAAYKDVE 2431
            VSAMRVSAIK+ELDERGVGYRGLF+KSEFVDLLVDARA+GITAPP SSSG      XXXXXXXX  QDKADAAYKDVE
Sbjct:   19 VSAMRVSAIKEELDERGVGYRGLFDKSEFVDLLVDARAEGITAPPLSSSGDTDGGAXXXXXXXXXXQDKADAAYKDVE 96
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BLAST of Ec-00_007380.2 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.940e-14
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 2 
Query: 2201 SAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAPPPSS 2341
            SAM VSAIK+ELDERGV YRGLFEKSEFVDLLVDARAKGITAPPPSS
Sbjct:  328 SAMLVSAIKEELDERGVRYRGLFEKSEFVDLLVDARAKGITAPPPSS 374
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BLAST of Ec-00_007380.2 vs. uniprot
Match: D7G5M9_ECTSI (STI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M9_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.880e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3 
Query: 2862 VMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 2969
            VMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF
Sbjct:   50 VMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
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BLAST of Ec-00_007380.2 vs. uniprot
Match: A0A7S2TYI6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYI6_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 2.280e-5
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 2 
Query: 2198 VSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDAR 2308
            VS MRV  IK+ELD  GV YRGL E+SE+VDLLVD R
Sbjct:   21 VSKMRVKEIKEELDSFGVSYRGLLERSEYVDLLVDTR 57
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BLAST of Ec-00_007380.2 vs. uniprot
Match: A0A7S3JZ43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZ43_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.290e-5
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 3 
Query: 2847 AEQSKVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 2969
            A+  K+ AA+ DV  NG+SAMSKY  DPEI+A + ELKGLF
Sbjct:   59 AQNPKLKAAVLDVQANGISAMSKYASDPEIMATLNELKGLF 99
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BLAST of Ec-00_007380.2 vs. uniprot
Match: A0A836CC67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC67_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.900e-5
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 2 
Query: 2198 VSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAP 2329
            + +MR+S IKKEL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  122 IQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 165
[Close]
BLAST of Ec-00_007380.2 vs. uniprot
Match: A0A7S4DLC6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DLC6_9EUKA)

HSP 1 Score: 53.1 bits (126), Expect = 1.000e-4
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 2 
Query: 2198 VSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDAR 2308
            VS MRV  IK ELD  GV YRGL E+SE+VDLLV+ R
Sbjct:   31 VSKMRVKEIKDELDSYGVSYRGLLERSEYVDLLVETR 67
The following BLAST results are available for this feature:
BLAST of Ec-00_007380.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G4D5_ECTSI9.940e-4874.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUZ2_9PHAE8.530e-3174.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G5M8_ECTSI3.160e-2484.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D2_ECTSI2.940e-1493.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5M9_ECTSI1.880e-12100.00STI1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2TYI6_9EUKA2.280e-570.27Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S3JZ43_9STRA2.290e-560.98Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A836CC67_9STRA7.900e-563.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DLC6_9EUKA1.000e-467.57Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11811076..11818657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length3834
Hectar predicted targeting categoryother localisation
Gene idEc-00_007380.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007380Ec-00_007380Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11811076..11818658 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007380.2Ec-00_007380.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11816874..11817215 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007380.2.10Ec-00_007380.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11811076..11812038 -
Ec-00_007380.2.9Ec-00_007380.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11812391..11812822 -
Ec-00_007380.2.8Ec-00_007380.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11813407..11813640 -
Ec-00_007380.2.7Ec-00_007380.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11814195..11814287 -
Ec-00_007380.2.6Ec-00_007380.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11814429..11815031 -
Ec-00_007380.2.5Ec-00_007380.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11815369..11815755 -
Ec-00_007380.2.4Ec-00_007380.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11816211..11816276 -
Ec-00_007380.2.3Ec-00_007380.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11816568..11816630 -
Ec-00_007380.2.2Ec-00_007380.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11816818..11817535 -
Ec-00_007380.2.1Ec-00_007380.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11818383..11818657 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0073803UTR:Ec-00_007380.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 11811076..11812038 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007380.2CDS:Ec-00_007380.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11816874..11817215 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0073805UTR:Ec-00_007380.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 11817216..11817535 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007380.2 ID=Ec-00_007380.2|Name=Ec-00_007380.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=114bp
MVPPGRHRQRAVRSTPTRPRLRPTARRPDNRRLRRRPESPCPRPTTLWPR
RRRGSKRTQKPPPPRREPPRLKPNRQGPKKRRDERRKSLRLARRRRRKQP
PGSPPRRRRLLLS*
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spliced messenger RNA

>Ec-00_007380.2 ID=Ec-00_007380.2|Name=Ec-00_007380.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3834bp|location=Sequence derived from alignment at chr_00:11811076..11818657- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACACACAGCAGTTCAGGACAACACGTGTCATCCTATCATCCTAAAATCCT
AGGGCAGTGCACGAAACGCAGACCACGCCTCTCGGCAAAACAAATGGACC
ACACGCGGCTGCCCGCCATGAGTGCTAGGATGCTGGTGCTGGCGGCGGTG
GTGGGCTCCCTTTGGAATCTCGTGGGCTCCTTCGCGTTCGTGACTCCTGT
CAAGACCAAGACACGACTTCAACTGCGCAGCCTTGCCGGCGGCACGACGT
TCGTTCAGCCCGCCGACCAGAGCAGGGTGCGCACCGCCGGCGTCGGCTGG
GCGCGATCGCCGATCGTGAGGCCGCCGGTCATCAGACTCTCCTCCTCGTC
CAGCGGTGACGGCAACGACGGCAAGGAAGCGGCGGGGGGAGGGGGCCCGG
ACGCCCTCCAACGGGAAATTGACAGCATACGGGAGGCGCGAATGACCGCC
GGCCAGATCAAGGTGGAGCTCGACGCGCTAGGGGTCAGCTACGTGGGCCT
GCTGGAGAAGGCGGAGTACGTGCTTGCGCTGGCAGAGGCTCGGGTTTCCG
GTGGTGGCGGAGGCGGTGGGCAGACAGGGCCAGCAGAAACAGGCGATGGT
GCCGCCGGGGAGGCATCGTCAGCGAGCGGTGAGGTCGACACCGACGCGGC
CGCGGCTGCGGCCGACGGCCCGGAGGCCGGACAACCGCCGTCTGCGACGG
AGGCCGGAGAGTCCATGCCCGCGGCCGACGACGCTGTGGCCGAGGCGAAG
GCGAGGCTCGAAGAGGACGCAAAAGCCGCCGCCGCCGCGGCGAGAGCCAC
CGAGGCTCAAGCCGAACAGGCAAGGGCCGAAGAAGAGGCGAGACGAGAGG
CGGAAGAGCTTAAGGCTCGCCAGGAGGCGGAGGAGGAAGCAGCCGCCAGG
GTCGCCGCCGAGGAGGAGAAGGCTGCTGCTGAGCTGAAGGAGAAGCTGGA
GGCGGAGGCGGCGGCCGCCCAAGCCGCCGCCGAGCGCGAAGAGGCGCTGC
GCATCGAACAAGAGAAGGAGGAGGCCGCCAGGATAGCTGCCGAAGCCCAG
GCCCAGGCAGACACGGAGGCCGAACTTGCCGCTGAACAGGCGGCCGCCAA
GATGAAGGCCGAGGAGGAAGAGGCGGTGCGCGTCGAAGAGGAGAAGCAGA
AAGCTCTCGCCGAGATGGCCGAAGCCGAAACGAAGGCAGCCGCCGAAGCA
GAGGCTGCCCAAACAGAAAAGGATACAGCTGCTGCCGCGGCGGCGGCCCC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTGATGATGTCGAACAAGAGG
AGCCAGCTGGCCAGGAAGAGGAGACTCCGGAGCCGAGCGCAGAGGGGGAG
AAGGAAGAGGAGAAGGGGGGAGAGGTGGCGGGAGAGGAGGTTTCCATGGA
CCCGTCCGGAGCACCGAATGCCGCAGAGGAGAAGGAGGATGAGGTTGAGG
AAGTAGTCTCACCACCCCCTGAGGACAAGGAAGCGCCGCCGCCGACTCCT
TCGGAAACGGATGAGGCAAGCGCACGGGCGTCCGAGACCCCTTCACCGGA
CACGGCCGAGACCGCGGCGGTAGCTCAAGACACCGCCCCACCGCCGGCGG
ACGAGACGGCAGACACGCCGACGGAGCCCGGGACTCCTGCTCCGGAGACC
ACCGAAGCCGCGACGCCAGCTCCCGAGGGCGACGCCGCCGCCGCCGCCAC
GCCTCCTCAAGTCGACGAAGTCAATGGCGGCGACGCAACGGACCCGCCTT
CTGAGGACGACGCAGGCTCTGAGACCGACGCCGCTCCTGCTGCTGGTGAT
GACGATGACGCCGAGGAGCAAGCCTCTGGGGGGGGCGGCGGCGTGGACGC
GCAGGCGGCCAAGATCAGGGAGGCTCGCATGACCGCGGGGCAGATAAAGG
CGGAGCTGGACGCCCTGGGCGTGGGCTACGTGGGCCTGTTGGAGAAGTCG
GAGTTCGTGATGAAGCTCGCGGAGGCGAGGGTAGACGGGGGAGGGAAGGC
GGCATTGGAAGGGGAGAGTAGTGATGCGGTGGAAGAGGAGGAAGAACAAG
GTTCGGCCGAGGAGGCGGGAGGAGAGAAGAGCTCTGACGCCGCGGACACT
GCTGCTACTGACGCGGAAGACGAGAAGAAGGAGAAGGAGGAGAAGGAGGA
GGAGGAGGAGGAGGAGGAGGCAGCGTCGTCTGCCGGAGAAGACGCCGCCG
ATGAGGTTTCCGCGATGCGCGTCTCCGCGATAAAGAAGGAGCTCGACGAG
CGAGGGGTCGGATACCGAGGGCTCTTCGAGAAGTCGGAATTCGTTGACCT
CCTGGTCGACGCTAGGGCCAAGGGGATCACCGCACCTCCGCCATCATCGT
CCGGCGACACCGATGGTGGTGCTGGGAGCGGGGGGGGGGCATCCGCCCAG
GCACAAGACAAGGCCGACGCCGCCTACAAGGACGTCGAGGTGAAGAAGAT
GAACAGCGACCCCTCCGGCGGCAGCGGCGGCGGCGGCAGCGGCCAACAAC
AGCAGCAGCCCGGAGGCGGCGGTGGTATGCCTGGGGGCATGCCCGGCGGG
ATGCCCGGCGGCGGGATGCCCGGGGGGATGCCCAACATGGGCGGGGGCGG
GGGCGGTGTCAACATCAACGACATCTTGAGCGGCCTCGGGGGTATGGGCG
GGGGCGGCGGCGGGGCCGCTGGCGGGGCGGGAGGGGGAGCCGGTGGCTTC
GACATCGGCAGCATTCTTGGCGCGATGGGAGGAGCAGGCGGTGCGGCGGG
GGGCGGTGCGCCAGGAGGAGGGGGGGGCGGAGGGATGGGAGGCATGGGTG
ACATGATCGGGAAGATGATGAACAACCCGAAGGCCATGGAGGCGTTCCAG
AAGGCGCAGAGCAATCCAAAGGTCATGGCCGCCATCCAAGACGTTACCCA
GAACGGCATGAGCGCCATGTCCAAGTACCAGGACGACCCCGAGATCTTGG
CGATCATCGAGGAGCTCAAGGGCTTGTTCTGAGAGACAAAGGGTAGGGGG
GGCAAGATTGCCACACCACCGCAGGCTAACAGCAGCTTAGTACCACCATC
GATGACAACGTAGTCTCGGAACCCTGGCACCGACAAAGGGCACATGCACG
CCGTCGAGTGAGAGTAGACAAGCTCTCTCCCGCTGCTGCTGCTGCTGCTG
CTGCCGCTGTTGCAGCTGAGACTACGTGGCTGCAGCAGCGGTTGTCGAAG
TCGTACGTAACACGACAACAAGAGGAGAATAACTCGGCTCCCGACAAGCA
GCGGTACAACAGGAGCCGCACGTAGCAGTAGTGATTGCGTTCGCATGTGT
GTAGACTTTAACGTCTTGCGTACGAACGCGTTCGTGGTATCATGTACGGT
GGTTTGGATTGGACGGCGCCGAGTTCGCAATCGGTATTGTGCATTTGTAG
GCTGAGACGAGCCCTGCCCATACGAGGCTTTCGTGCTTCGACACACTGCC
ATCTGATGATGCTTGTTCTTCTTGGTTCCTATTTAGCCGGTGCGGGTGTG
TAGCAAAGTGCGTTTCGTTCGTTGTGCGGTAGAGGTGCCTGAGAGTATGG
AACTCTAGAACCCTAGTAGTTAGTTGGTTACAGACTTAGCCGGAGAAGGC
ATATGACAACCATGCTGCTGCCGCTTCCGACGCGCCGGTCATTGTGTGAT
TGTAAGCTCATTTAGTAGCGCAAAAGTAACATCGAAAAGAGACGGGTCCA
CAACTACTTTTGTGGTTGCCTGGAAGGCAATGCTGTTACGTGCCGCTGCA
CAGCCGCGTTGAACAGGTTGCGAACGCAGCGCGGCACAGGCTGTCCGTGT
GTTTGACGGCAGCATGATCGAAGACGCGAACCTG
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protein sequence of Ec-00_007380.2

>Ec-00_007380.2 ID=Ec-00_007380.2|Name=Ec-00_007380.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=114bp
MVPPGRHRQRAVRSTPTRPRLRPTARRPDNRRLRRRPESPCPRPTTLWPR
RRRGSKRTQKPPPPRREPPRLKPNRQGPKKRRDERRKSLRLARRRRRKQP
PGSPPRRRRLLLS*
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mRNA from alignment at chr_00:11811076..11818657-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007380.2 ID=Ec-00_007380.2|Name=Ec-00_007380.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7582bp|location=Sequence derived from alignment at chr_00:11811076..11818657- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACACACAGCAGTTCAGGACAACACGTGTCATCCTATCATCCTAAAATCCT
AGGGCAGTGCACGAAACGCAGACCACGCCTCTCGGCAAAACAAATGGACC
ACACGCGGCTGCCCGCCATGAGTGCTAGGATGCTGGTGCTGGCGGCGGTG
GTGGGCTCCCTTTGGAATCTCGTGGGCTCCTTCGCGTTCGTGACTCCTGT
CAAGACCAAGACACGACTTCAACTGCGCAGCCTTGCCGGCGGCACGACGT
TCGTTCAGCCCGCCGACCAGAGCAGGTAAACGCCCAGAGTGTGCGATCTT
GTGGCTGTATTCAGGCGTGCATGTTGTGTGCATGTTTGGTTGCGCGAGAT
TTGTCTTGTCCCACGTCGTTCGTGTGTGATGCTGCTCTGCTGCACCGCTG
TTCTCAGTCGCGCCCCACGTCCTTTCTAGAACAAACATTTGACAACGCGG
ATCAACCACGAACACACATGATGATCTTATCTGCCCCTGCGTACATGTGT
GCGCATATGCGTATGTAGATTTACAGCACAGAGAGCCACAACCCTCATCA
CGACGCACCAGACCAAAGAGCAGTAGTGACTGACGCCATGTGCAGCGGGG
TCAGGCCCGCCCCATGGCGGTGCATATGTGAAAAAAAACGCCGACACATG
TTCTTGCCCTAGACTACAGCACAGAAAGACACGCGGCGGTGTTCCCGTGC
AGTCGAGGTGCGAGCAGAGAGTCGGTCTCGCTCTGGCTCGGTCCCTTCCT
TTCTGGCCGCTCGTTTGAACGCAACCTAAAGACGACAAGTAGCACTTGGT
AGACTTCTCTCATTCTCTCGTGCGCTAACCAATGCCAAAAGTGAATGACC
TCGTGAACAAAGCAGGACGACTGCTGTGTCCATAGCAGTTTTAGACTCAA
ACAGCTGTCGTTCATGTACAGTAGATTCCCACGACTCTGTCCGTGCACCC
TATGCTTCCGTGAGGCCACCGTGAGGATGCTAAGAGAGTTGTCCACGGGG
CGGCATTCTCCATGCCAGCAAACACCCCCATCACTCGTGTGTGTATGTTT
GTGTATGTACTCACGTTTTGTTTAATACGCACGTGCCAACTTTTTTCAAT
CCCCTCTCAACTCCACTCCCAGGGTGCGCACCGCCGGCGTCGGCTGGGCG
CGATCGCCGATCGTGAGGCCGCCGGTCATCAGACTCTCCTCCTCGTCCAG
CGGTGACGGCAACGACGGCAAGGAAGCGGCGGGGGGAGGGGGCCCGGACG
CCCTCCAACGGGAAATTGACAGCATACGGGAGGCGCGAATGACCGCCGGC
CAGATCAAGGTGGAGCTCGACGCGCTAGGGGTCAGCTACGTGGGCCTGCT
GGAGAAGGCGGAGTACGTGCTTGCGCTGGCAGAGGCTCGGGTTTCCGGTG
GTGGCGGAGGCGGTGGGCAGACAGGGCCAGCAGAAACAGGCGATGGTGCC
GCCGGGGAGGCATCGTCAGCGAGCGGTGAGGTCGACACCGACGCGGCCGC
GGCTGCGGCCGACGGCCCGGAGGCCGGACAACCGCCGTCTGCGACGGAGG
CCGGAGAGTCCATGCCCGCGGCCGACGACGCTGTGGCCGAGGCGAAGGCG
AGGCTCGAAGAGGACGCAAAAGCCGCCGCCGCCGCGGCGAGAGCCACCGA
GGCTCAAGCCGAACAGGCAAGGGCCGAAGAAGAGGCGAGACGAGAGGCGG
AAGAGCTTAAGGCTCGCCAGGAGGCGGAGGAGGAAGCAGCCGCCAGGGTC
GCCGCCGAGGAGGAGAAGGCTGCTGCTGAGCTGAAGGAGAAGCTGGAGGC
GGAGGCGGCGGCCGCCCAAGCCGCCGCCGAGCGCGAAGAGGTGGGCTAGT
TCGCTGCTCGCGTGTTCGAATTGTGTACAAATTGACCGCCTGGTAGCACG
TTGTTTGCTGTTGTTTTTTGACAGCGTGTTGTACACCGGCACTGCCGCCA
TCAAGAACCAACACCGCTTGTTCTTCTCGGCGTGTTCGTGTATGGGTGTG
TCTCGTGTTGGTGTTCGTCGCAATCAGGCGCTGCGCATCGAACAAGAGAA
GGAGGAGGCCGCCAGGATAGCTGCCGAAGCCCAGGCCCAGGTACACATAC
GTGCATACCCGGTATCAAACACGTTCGGAGGATTCGCCAAAATGTTGTTG
ATGGGCGTTGAAACGGCAACCCTTGCGATTGCACCCTCCACGTACCCTTC
ATCTATCGCGAACACAAGTAACATACGGTGAGGGTGATTGCTCACTTTTT
TTTTATCTTCAATTCCCAAATTTAGCGGTAATGCACAAATCCCGCGATTC
TTGTCGCCGCTGAGTCTCGCGCTGACTTGGCTCGCGTTGCGTGTGTGTGC
GTGTGCGCGTGTGTGTGTTGTATCTCATCAGGCAGACACGGAGGCCGAAC
TTGCCGCTGAACAGGCGGCCGCCAAGATGAAGGCCGAGGAGGAAGAGGTA
CAGTGGTGTAATAGCCAAGCCCCCCTGCTGCGTGCAGTGTACATGTTGTG
ATAACGTCCGGCTGGAGTAATACACCCAGGCGTTATGCGTAAGTTGTTGT
TGGTTCTTGTGGTGTTGTGGAAGAGAGAGGGCACCTTGAATACAGAAAGG
TTCTGCGCGGAGGGGCAGCACAAGAGACAGCAGCAGTATTGGTGTTTGGT
TTATGCGACTGAGACGCGAAACGCCTTGGTATTCGTCACGCCTTTGCCTA
TTTGCCCTCTCTGTCTCTGTCTCTGTCTGTCTGTGTGTCTGTCTGTCTGT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGTCCGTGCTCTTCGGTATGAGATACTCGTTCATCTCATTCATCTCATT
CATCTGTGTTCCCTGTTTGTTCCTGTTGTCAACGCCCCCGCCGGTGTGCC
AGGCGGTGCGCGTCGAAGAGGAGAAGCAGAAAGCTCTCGCCGAGATGGCC
GAAGCCGAAACGAAGGCAGCCGCCGAAGCAGAGGCTGCCCAAACAGAAAA
GGATACAGCTGCTGCCGCGGCGGCGGCCCCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTTCTGATGATGTCGAACAAGAGGAGCCAGCTGGCCAGGAAGAG
GAGACTCCGGAGCCGAGCGCAGAGGGGGAGAAGGAAGAGGAGAAGGGGGG
AGAGGTGGCGGGAGAGGAGGTTTCCATGGACCCGTCCGGAGCACCGAATG
CCGCAGAGGAGAAGGAGGATGAGGTTGAGGAAGTAGTCTCACCACCCCCT
GAGGACAAGGAAGCGCCGCCGCCGACTCCTTCGGAAACGGTGAGTGCTTT
GGGTAACTGATCGATTTGGAGCACGTGGAGTGGAGCGTTTGCACTACTTT
GTGCTACGCCACGCGTATACTGCTGTGGACGAGAGAGAGGTGGCGTGTGA
GAAGAAAAAAATATATGGGACTGCACGGGACGTGTGGCGCACCCATCTCG
AAGTCCGCGCGATCCACTGGCTTCCCCGCGCGCGACCTCTGCTTCCTGCT
CCAATTTCCATTCGCGGCGGGTGGTTTCTACACACATGTTGACACAACCT
TATCCTTCCACCACGTCAACCAACCCAATGGCAACTAACGCAATGACAAA
CCACTATTACTCATTTGTCGGCCCAGGATGAGGCAAGCGCACGGGCGTCC
GAGACCCCTTCACCGGACACGGCCGAGACCGCGGCGGTAGCTCAAGACAC
CGCCCCACCGCCGGCGGACGAGACGGCAGACACGCCGACGGAGCCCGGGA
CTCCTGCTCCGGAGACCACCGAAGCCGCGACGCCAGCTCCCGAGGGCGAC
GCCGCCGCCGCCGCCACGCCTCCTCAAGTCGACGAAGTCAATGGCGGCGA
CGCAACGGACCCGCCTTCTGAGGACGACGCAGGCTCTGAGACCGACGCCG
CTCCTGCTGCTGGTGATGACGATGACGCCGAGGAGCAAGCCTCTGGGGGG
GGCGGCGGCGTGGACGCGCAGGCGGCCAAGATCAGGGAGGCTCGCATGAC
CGCGGGGCAGATAAAGGCGGAGCTGGACGCCCTGGGCGTGGGCTACGTGG
GCCTGTTGGAGAAGTCGGAGTTCGTGATGAAGCTCGCGGAGGCGAGGGTA
GACGGGGGAGGGAAGGCGGCATTGGAAGGGGAGAGTAGTGATGCGGTGGA
AGAGGAGGAAGAACAAGGTTCGGCCGAGGAGGCGGGAGGAGAGAAGAGCT
CTGACGCCGCGGACACTGCTGCTACTGACGCTACTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTCCCGCGGCTGGCGATGAAGGGGAGCCGGCCGC
CGAGGAAGAGGTCTCGTCGGAACCGTCGACGACGCCGCCACCGCCTGCTG
CTGCCGCTGACACGGCCGAGGCGGAAGACGAGAAGAAGGAGAAGGAGGAG
AAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGCGTCGTCTGCCGGAGAAGA
CGCCGCCGATGAGGTAGGTGACCTGGCTTGATGGAGCCAAGATTGTCTGT
TCCGCGGTTTCGCCTCGTAGTGCACGTTTTTTCGTGTTGGTGTGTTCCTT
GTTGTTTCTTTCTCGGCAGTGTTATTTCTTGCTGTTGCTCACTCGACGGC
AGGAACCCTTTCTCCAGGTGGTGAAAGAAACCCGGTTATATTCCTCCGCA
GCTAGTAAATAGAGGTGCACCTGCGTGTTTCGTGTTACATCACCGTTGCT
CTTTTTGCCCCCCCCCCCCCTGCGGGAGGTCCCGTGGTTTGTAAGTCAAC
GCCATGCCCTGGTTCCACAATTCCCGTCTCTATGCGCTTCGATGCCCTGC
GGAATACGACAACCGTACCCCGAACCACAAATCTATACACCTACACAATA
GCACACATTGCACGCGTACTCTGATTCCTACTCGACAGCGTTCTTTATTG
CTCTTCTGCCTATGGTACCGCCAATGACTGTTGCCAATAGTGGTCAGCCG
TTTTGGTGCTGTCAATGCCAGCGAACGACTTACCCCACACACACACGCTT
TGGCACGGGTGTTGCAGGTTTCCGCGATGCGCGTCTCCGCGATAAAGAAG
GAGCTCGACGAGCGAGGGGTCGGATACCGAGGGCTCTTCGAGAAGTCGGA
ATTCGTTGACCTCCTGGTCGACGCTAGGGCCAAGGGGATCACCGCACCTC
CGCCATCATCGTCCGGCGACACCGATGGTGGTGCTGGGAGCGGGGGGGGG
GCATCCGCCCAGGCACAAGACAAGGCCGACGCCGCCTACAAGGACGTCGA
GGTGAGGAGAAGACTTGGAAGAGATGCTCCCAGGGATGGGTCTAGGTTGG
CGCGGGAATCAAGCCAGGGGTTGGTATCTGGGAATATTTTGACGCATTGA
TATTTGTTCGGTGCCCCTGGTGTTGTTCGCGTTTGGAGGGTGTGCTAAGG
GACCAGGGGGCGTTTGCCTTTGAAGAGAGTGAATGGAGCCTCTTGTTGGA
CGTCGCCCCTCTCATTGTGCTGATGACACGTCAACACTTTTTGCGTCCTG
GATAACACTTGACGCAAGGCACCTGCAAACCGCGAAAAAAATCGCTTGCC
TCTCTCTCAGCCGGCGCCAACTCGCTTTTTCGAAGGCAAAACAAGTAGCC
GCATCCACCGCAACTGTTGTCTAGCCATCGTGATCGCAGATGCGGTAGAT
AACACCGGTGAGGTATGTGTGTGGCAAGTGTATCTACGCCCTTTTTGACT
CGACATTGAGGCACGGCATATTTAACCACACACCCCCAACTCAGCAGTTT
CATCCACGTCAACGAAACATCCAGGATTCCCACCACCTACCCGCCCCGCG
GCTCGGGTGTTTGCCCCTTTTGCTGCTGAAAGTAGGTGAAGAAGATGAAC
AGCGACCCCTCCGGCGGCAGCGGCGGCGGCGGCAGCGGCCAACAACAGCA
GCAGCCCGGAGGCGGCGGTGGTATGCCTGGGGGCATGCCCGGCGGGATGC
CCGGCGGCGGGATGCCCGGGGGGATGCCCAACATGGGCGGGGGCGGGGGC
GGTGTCAACATCAACGACATCTTGAGCGGCCTCGGGGGTATGGGCGGGGG
CGGCGGCGGGGCCGCTGGCGGGGCGGGAGGGGGAGCCGGTGGCTTCGACA
TCGGCAGCATTCTTGGCGCGATGGGAGGAGCAGGCGGTGCGGCGGGGGGC
GGTGCGCCAGGAGGAGGGGGGGGCGGAGGGATGGGAGGCATGGGTGACAT
GATCGGGAAGATGATGAACAACCCGAAGGCCATGGAGGCGTTCCAGAAGG
CGCAGAGCAATCCAAAGGTAAGTTTTATTGGCGTGTTTCAGGTCGACGAA
ATGCGGTCTTGGTTGTCTTGCAAGAGAGAGAGAGTTGGGCTGGCTCACTG
TGCACCCGCCTTCGCCCAGACGTAGGCCATGAGCATTTGTACATACTCTC
TTCCGTTTGTCAGATTCGGAAGGACACAGTGGTTTAACGATTGTGAGGAA
GGAGGACTGATAATAAGGTAAAACAGCTCTTGATGATCAGCATGCCGCCA
CATGCTCCCTTGTCCCTCCCTGTGCATTTCAAAATATGACGACCATTTTT
ATTGTTGTTGCGTGTTTCCTCTACTCCTGTTTTGATATCCTGGTGCCGCG
TGTACGCGACGGCACGTAGGTCATGGCCGCCATCCAAGACGTTACCCAGA
ACGGCATGAGCGCCATGTCCAAGTACCAGGACGACCCCGAGATCTTGGCG
ATCATCGAGGAGCTCAAGGGCTTGTTCTGAGAGACAAAGGGTAGGGGGGG
CAAGATTGCCACACCACCGCAGGCTAACAGCAGCTTAGTACCACCATCGA
TGACAACGTAGTCTCGGAACCCTGGCACCGACAAAGGGCACATGCACGCC
GTCGAGTGAGAGTAGACAAGCTCTCTCCCGCTGCTGCTGCTGCTGCTGCT
GCCGCTGTTGCAGCTGAGACTACGTGGCTGCAGCAGCGGTTGTCGAAGTC
GTACGTAACACGACAACAAGAGGAGAATAACTCGGCTCCCGACAAGCAGC
GGTACAACAGGAGCCGCACGTAGCAGTAGTGATTGCGTTCGCATGTGTGT
AGACTTTAACGTCTTGCGTACGAACGCGTTCGTGGTATCATGTACGGTGG
TTTGGATTGGACGGCGCCGAGTTCGCAATCGGTATTGTGCATTTGTAGGC
TGAGACGAGCCCTGCCCATACGAGGCTTTCGTGCTTCGACACACTGCCAT
CTGATGATGCTTGTTCTTCTTGGTTCCTATTTAGCCGGTGCGGGTGTGTA
GCAAAGTGCGTTTCGTTCGTTGTGCGGTAGAGGTGCCTGAGAGTATGGAA
CTCTAGAACCCTAGTAGTTAGTTGGTTACAGACTTAGCCGGAGAAGGCAT
ATGACAACCATGCTGCTGCCGCTTCCGACGCGCCGGTCATTGTGTGATTG
TAAGCTCATTTAGTAGCGCAAAAGTAACATCGAAAAGAGACGGGTCCACA
ACTACTTTTGTGGTTGCCTGGAAGGCAATGCTGTTACGTGCCGCTGCACA
GCCGCGTTGAACAGGTTGCGAACGCAGCGCGGCACAGGCTGTCCGTGTGT
TTGACGGCAGCATGATCGAAGACGCGAACCTG
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Coding sequence (CDS) from alignment at chr_00:11811076..11818657-

>Ec-00_007380.2 ID=Ec-00_007380.2|Name=Ec-00_007380.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=342bp|location=Sequence derived from alignment at chr_00:11811076..11818657- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGCCGCCGGGGAGGCATCGTCAGCGAGCGGTGAGGTCGACACCGAC
GCGGCCGCGGCTGCGGCCGACGGCCCGGAGGCCGGACAACCGCCGTCTGC
GACGGAGGCCGGAGAGTCCATGCCCGCGGCCGACGACGCTGTGGCCGAGG
CGAAGGCGAGGCTCGAAGAGGACGCAAAAGCCGCCGCCGCCGCGGCGAGA
GCCACCGAGGCTCAAGCCGAACAGGCAAGGGCCGAAGAAGAGGCGAGACG
AGAGGCGGAAGAGCTTAAGGCTCGCCAGGAGGCGGAGGAGGAAGCAGCCG
CCAGGGTCGCCGCCGAGGAGGAGAAGGCTGCTGCTGAGCTGA
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Synonyms
The feature 'Ec-00_007380.2' has the following synonyms
Synonym
Esi0553_0003
Esi_0553_0003