Ec-00_007340.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007340.1
Unique NameEc-00_007340.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length176
Homology
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A6H5JXR3_9PHAE (AD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXR3_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 2.180e-122
Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 1 
Query:    1 MAELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGPKSG 525
            MAELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHS ILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTAD+CRSLDGDKPGLDRALLMLGKFR QLEGPKSG
Sbjct:    1 MAELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSAILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADNCRSLDGDKPGLDRALLMLGKFRNQLEGPKSG 175
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A7S4A542_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A542_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.530e-23
Identity = 62/166 (37.35%), Postives = 89/166 (53.61%), Query Frame = 1 
Query:    7 ELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITI--KQDIPNTKTHSTI-LVYNRAHVQIDVVPGAPVVDD---CMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLML 486
            +L +G  V ++ K   + EG VYT D +T T+ +    + P T+    + LV   A   I VV      D       LP I      ++E++A +    A A +NP A+  GQA FD  +KTLDCSWS  SI +L+ VR+D PYT D+C SLDG+K  L+R   ++
Sbjct:   11 KLKIGATVSIKLKDSGSCEGAVYTVDPVTKTVVLFSAAEKPVTQDSRDVRLVPEHAIDSIKVVKPPDAKDKKALVAPLPAIDVAACKKRESEAYEAMEAAMAMLNPNASAAGQACFDALSKTLDCSWSGDSINVLDQVRVDAPYTEDACVSLDGNKSSLERIRKIV 176
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A8J2SSH3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSH3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.170e-22
Identity = 62/166 (37.35%), Postives = 89/166 (53.61%), Query Frame = 1 
Query:    7 ELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITI--KQDIPNTKTHSTI-LVYNRAHVQIDVVPGAPVVDD---CMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLML 486
            +L +G  V ++ K   + EG VYT D +T T+ +    + P T+    + LV   A   I VV      D       LP I      ++E++A +    A A +NP A+  GQA FD  +KTLDCSWS  SI +L+ VR+D PYT D+C SLDG+K  L+R   ++
Sbjct:   11 KLKIGATVSIKLKDSGSCEGAVYTVDPVTKTVVLFSAAEKPVTQDSRDVRLVPEHAIDSIKVVKPPDAKDKKALVAPLPAIDVAACKKRESEAYEAMEAAMAMLNPNASAAGQACFDALSKTLDCSWSGDSINVLDQVRVDAPYTEDACVSLDGNKSSLERIRKIV 176
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A077WPF1_9FUNG (AD domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WPF1_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 1.240e-19
Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = 1 
Query:    4 AELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNT----KTHSTILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLE 510
            A+ ++G+R+K++  +    EG +Y  D LTN I ++    N     +   +  +   +HV+  +        D + +  +    LD +E+  ++   +  A++  G T E Q IFD  +KTL C WS+ +IV+L+ V I PPY  DSC++       L R   +L   R++LE
Sbjct:   33 AQKILGRRIKLKTASNEEIEGRIYALDRLTNCIALECSTDNAAQQGRKQLSFRIIKISHVKEVLSNQEDAPTDFLPINYVDTNRLDARESSGVKNMRQRVAKMGVGVTKEAQDIFDALSKTLPCRWSNDTIVVLDEVLIQPPYDVDSCKANSSSASSLARVKKVLEGERRRLE 205
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A836BVG9_9CHLO (AD domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BVG9_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 5.220e-19
Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 1 
Query:   16 VGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQL 507
            VG  + +  + G    G+V+  DA ++ + IK++  ++   S I V N + V+  V    P     + LP +      ++E +ALQ+A    A++  G T E QAIFD   KT+   W ++SIV+L+SV +D PYT D+CRS +  +   +R  ++L   R++L
Sbjct:   12 VGNNIVLVTQQGEEVRGLVFAFDAPSSLVIIKENGAHSGV-SNIRVLNTSGVREVVSSVKPERPMDLTLPLVDLERCRKREERALQQAELESARVGEGVTKEAQAIFDALVKTMPTVWRNKSIVVLDSVYVDEPYTPDTCRSDEEHRATRERVKMVLKLERQRL 174
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A068RL69_9FUNG (AD domain-containing protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RL69_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18
Identity = 49/173 (28.32%), Postives = 88/173 (50.87%), Query Frame = 1 
Query:    4 AELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNT----KTHSTILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLE 510
            A+ ++G+R+K++  +    EG +Y  D LTN I ++    N     +   +  +   +H++  +        D + + ++    LD +E+  ++   +  A++  G T E Q IFD  +KTL C WS+ +IV+L+ V I PPY  DSC++       L R   +L   R++LE
Sbjct:  164 AQKILGRRIKLKTASNEEIEGRIYALDRLTNCIALECSTDNAAQQGRKQLSFRIIKISHIKEVLSNQEDAPADFLPINHVDTSRLDARESSGVKNMRQRVAKMGVGVTKEAQDIFDALSKTLPCRWSNDTIVVLDEVLIQPPYDVDSCKANSSSASSLARVKKVLEGERRRLE 336
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A899FM48_9ASCO (AD domain-containing protein n=1 Tax=Pneumocystis wakefieldiae TaxID=38082 RepID=A0A899FM48_9ASCO)

HSP 1 Score: 87.8 bits (216), Expect = 3.100e-18
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 1 
Query:    7 ELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITI----KQDIPNTKTHSTILVYNRAHVQIDVV---------------PGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGPKSG 525
            E ++G +V+VR      + G +Y +DA+TNT+ +    K  +P ++T    ++      +I V+                  P +D   ++  +S   L  +E  + +E   A A+   G T E Q +FD  ++TL C W  QSI++L+ V IDPPYT ++C +   D  G  R   +L   R++L+    G
Sbjct:   24 ESIIGLQVRVRTVLNETETGEIYAYDAITNTLALQKKLKTSLPYSRTWDFSILKISCLKEIQVIGEIKEKTSADSEGNKEANPFLDSQPSVVPVSLEVLSVREQISRKEHQTAIARKGVGVTQEAQNLFDSLSRTLPCRWEKQSIIVLDDVYIDPPYTVEACWTASKDSKGYLRVCKVLEGERQRLDSLHRG 215
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A150FZM8_GONPE (AD domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FZM8_GONPE)

HSP 1 Score: 85.5 bits (210), Expect = 6.860e-18
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 1 
Query:   37 RPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTILVYNRA--HVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQL 507
            R + G    GVV+  D  +N + IK++  ++   +  L+       V   V P  P     + LP++      ++E KALQ+A    +++  G T E QAIFD   KT+ C W D+SIV+L++V +D PYT DS RS        +R  ++L   R++L
Sbjct:    3 RTQTGEEVSGVVFAFDKPSNLLVIKENGSHSGVSNIRLIKANGVREVLSSVEPEKPFD---LELPHVDLERCRKREEKALQQAELESSRVGHGVTKEAQAIFDALVKTMPCVWRDKSIVVLDTVYVDEPYTPDSVRSDKDHTATRERVKMVLRLERERL 158
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BLAST of Ec-00_007340.1 vs. uniprot
Match: A0A835WF64_CHLIN (AD domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WF64_CHLIN)

HSP 1 Score: 84.7 bits (208), Expect = 2.120e-17
Identity = 49/167 (29.34%), Postives = 86/167 (51.50%), Query Frame = 1 
Query:   16 VGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTILVYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGP 516
            VG  VK+R   G    G V+ +D  ++ + +K+   ++  ++ I +   + VQ  +    P     M LP +      ++E KALQ+A    +++  G T E QAIF+   KT+ C W  ++I++L+SV ++ PYT D+  S        DR  ++L + R++L  P
Sbjct:   12 VGNNVKLRTAQGEEVSGQVFAYDQPSSLLVLKEVGAHSGVNN-IRIIKTSGVQAVISDAKPDQPFDMELPAVDLERCRKREEKALQQAEFESSRVGEGVTKEAQAIFESLAKTMPCVWRGKTIIVLDSVSVEDPYTPDATHSDADHAATRDRVRMVLHRERERLGLP 177
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BLAST of Ec-00_007340.1 vs. uniprot
Match: M7NVA1_PNEMU (AD domain-containing protein n=2 Tax=Pneumocystis TaxID=4753 RepID=M7NVA1_PNEMU)

HSP 1 Score: 85.1 bits (209), Expect = 3.310e-17
Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 1 
Query:    7 ELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITI----KQDIPNTKTHSTILVYNRAHVQIDVVPGAP---------------VVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGPKSG 525
            E ++G +VKVR      + G +Y +DA+TNT+ +    K  +P ++T    ++      +I V+                    VD   ++  +S   L  +E  + +E   A A+   G T E Q +F+  ++TL C W  QSI++L+ V IDPPYT ++C +   D  G  R   +L   R++L+    G
Sbjct:   24 ESIIGLQVKVRTILNETETGEIYAYDAITNTLVLQKKLKTSLPYSRTWDFSILKISCLKEIQVIGETKEKIDTENEEVKKRNLFVDSQPSIVPVSLEVLSIREQISRKEHQAAIARKGIGVTQEAQNLFNSLSRTLPCRWEKQSIIVLDDVYIDPPYTVEACWTASKDSKGYLRVCKVLEGERQRLDSTHRG 215
The following BLAST results are available for this feature:
BLAST of Ec-00_007340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXR3_9PHAE2.180e-12298.29AD domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S4A542_9STRA2.530e-2337.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SSH3_9STRA8.170e-2237.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A077WPF1_9FUNG1.240e-1928.90AD domain-containing protein n=1 Tax=Lichtheimia r... [more]
A0A836BVG9_9CHLO5.220e-1932.32AD domain-containing protein n=1 Tax=Edaphochlamys... [more]
A0A068RL69_9FUNG1.070e-1828.32AD domain-containing protein n=1 Tax=Lichtheimia c... [more]
A0A899FM48_9ASCO3.100e-1828.13AD domain-containing protein n=1 Tax=Pneumocystis ... [more]
A0A150FZM8_GONPE6.860e-1832.70AD domain-containing protein n=1 Tax=Gonium pector... [more]
A0A835WF64_CHLIN2.120e-1729.34AD domain-containing protein n=3 Tax=Chlamydomonas... [more]
M7NVA1_PNEMU3.310e-1728.13AD domain-containing protein n=2 Tax=Pneumocystis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11792096..11794511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue2.4e-95
Seed eggNOG ortholog2880.D7G4D1
Length528
Hectar predicted targeting categoryother localisation
Gene idEc-00_007340.1
EggNOG free text desc.Anticodon-binding domain
EggNOG OGs2E9FP@1,2SFTQ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007340Ec-00_007340Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11792096..11794511 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007340.1.4Ec-00_007340.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11792096..11792140 -
Ec-00_007340.1.3Ec-00_007340.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11792659..11792788 -
Ec-00_007340.1.2Ec-00_007340.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11793145..11793264 -
Ec-00_007340.1.1Ec-00_007340.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11794279..11794511 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007340.1CDS:Ec-00_007340.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11792096..11792140 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007340.1Ec-00_007340.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11792096..11794511 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007340.1 ID=Ec-00_007340.1|Name=Ec-00_007340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=176bp
MAELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTIL
VYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQI
NPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDG
DKPGLDRALLMLGKFRKQLEGPKSG*
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spliced messenger RNA

>Ec-00_007340.1 ID=Ec-00_007340.1|Name=Ec-00_007340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=528bp|location=Sequence derived from alignment at chr_00:11792096..11794511- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGTTGGTCGTTGGCCAGAGGGTGAAGGTCCGCCCGAAGGCGGG
CCCGGCCCAGGAGGGCGTCGTGTACACCCACGACGCCCTCACGAACACCA
TCACGATCAAGCAGGACATCCCCAACACAAAGACGCACAGCACCATCCTG
GTGTACAATCGGGCGCACGTCCAGATCGACGTGGTGCCCGGAGCTCCCGT
GGTGGACGACTGCATGGCGTTGCCGAACATCAGCGGCCGGGAGTTGGACA
GGAAGGAGAACAAGGCACTCCAGGAAGCGACGAAGGCATGGGCACAGATC
AATCCGGGCGCCACCAACGAAGGACAAGCCATTTTCGACCTTTTCACCAA
GACTTTGGACTGCTCGTGGAGCGACCAGAGCATCGTGATCTTGGAGTCCG
TGAGGATAGACCCCCCCTACACGGCTGATAGTTGTCGCAGCTTGGATGGA
GACAAGCCAGGCCTCGACAGAGCGCTTCTAATGCTGGGCAAATTTCGAAA
ACAGCTGGAGGGGCCGAAGTCGGGCTGA
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protein sequence of Ec-00_007340.1

>Ec-00_007340.1 ID=Ec-00_007340.1|Name=Ec-00_007340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=176bp
MAELVVGQRVKVRPKAGPAQEGVVYTHDALTNTITIKQDIPNTKTHSTIL
VYNRAHVQIDVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQI
NPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDG
DKPGLDRALLMLGKFRKQLEGPKSG*
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mRNA from alignment at chr_00:11792096..11794511-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007340.1 ID=Ec-00_007340.1|Name=Ec-00_007340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2416bp|location=Sequence derived from alignment at chr_00:11792096..11794511- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGAGTTGGTCGTTGGCCAGAGGGTGAAGGTCCGCCCGAAGGCGGG
CCCGGCCCAGGAGGGCGTCGTGTACACCCACGACGCCCTCACGAACACCA
TCACGATCAAGCAGGACATCCCCAACACAAAGACGCACAGCACCATCCTG
GTGTACAATCGGGCGCACGTCCAGATCGACGTGGTGCCCGGAGCTCCCGT
GGTGGACGACTGCATGGCGTTGCCGAACATCAGGTGCGAAGTGCGAAAGC
ATGCTGTTTGGTATGTAGGCCTCTCCTTGGACTACTGTGTACAACGTGCA
GCGAAAACCAGATGTGTGTGTGCCGTGTAGCATGCCAGGGCGCGCCCCCA
CCCCAATACCGCTGCCTGCACCCGAAAGAAGGTCGACAACCTACAGCTGT
ATCCCTACAGCGTAGCGAAGTAAGTGTGCTGGTGCTTCACTACAGCGGCT
CTCTTTGCCCGACGTAACGTTGTTACATCTATCGAATACAACTCTAGCGT
GTTGGATCTTCGACGCTCCTCTGTCTCTCTCCTCTCTCCATTGCAATAGC
CCGAAAGTGTTTGAAATGATTGTTCCGTATTGGGAGGACGAGTTTGACGA
GCAGTATCTAACAAGATGCCTGCCGTCTTGTCTCTGTACCTTACGAGACG
GTACACATCAATGGTTGGGTTTTCGTGTGTGGGTGTACAGCCCGGTTAGG
TTCGTGATCATGCGTGTTTGCTTTGTTGTGACCGCCCCTACAGCAGGTCG
CCTGCTCTCTCTCTGTCAAGCTCAACGGTTCCAACGCGGTGGTAGCCTAG
CTCCAGATGATGTGTGTAACGTTATGTGTGTGGGTGGAAAGGCTATAGCG
TGTAGCGCTCGACGTTGTAGCCGTAGGCTGTGATGGATCACCACATCACA
ACAAGGTGGTGTGTGTTATGTCCTAACTATCTAGGAGTACTACTAGTACC
TGGTAGACGCCAATCTACACTTTGCGGCAGTAGTCTACCTCATGTTTCAC
GCACCAGCAGCATACAGGACCAAAAACCGGATTTCGTTCTTGTTCAACTC
TCCCCGTGCGGCGCTTGCCTTCAATCTTCAATTGTGAACGCGGTAAAGGT
TCAGCGTTTCTTGCCCTCTTGTGCGTGCTTACTCACGACCAAGTGGTGCA
AATAAACCAACATACCATTCGGTTTGGAACACTTCTGTAGTGCCTGATGA
AGAAGAAGCTGTTGACCTCGCCTGTTTTTGTGTCGTACGTATTTCAGCGG
CCGGGAGTTGGACAGGAAGGAGAACAAGGCACTCCAGGAAGCGACGAAGG
CATGGGCACAGATCAATCCGGGCGCCACCAACGAAGGACAAGCCATTTTC
GACCTTTTCACCAAGACGTGCGTGTGTTTTAGTATGTATTATGAGTAAAT
ATCTAGCATCGACCGCGCTGACCGGCTGACCAATGTGCGTGCTGTGTGCC
TTGCAGTTGTATCACACCTCCTGAAGACGCCGTCAGACGTGTAGCCCTGG
TTGTAGGAACCCTCCCCGCGTTTAATTGTGGCACGTGTTACATGACCATC
TCCGCAGACTGCCTAGAGGCAGAACCGCGAGAGCTAGGACATCGTACCTG
CTGCTTCGAATCCAAAGAAACTGCGTGGTTTCTCCACGTGCCATACACGG
AACTCGTTTCACGTCATCGATCGTTTCGCGTCATCGATCCTGAGCATAGA
CGCCCACTCTCCCCATGTTTCAGTTTGGACTGCTCGTGGAGCGACCAGAG
CATCGTGATCTTGGAGTCCGTGAGGATAGACCCCCCCTACACGGCTGATA
GTTGTCGCAGCTTGGATGGAGACAAGCCAGGCCTCGACAGAGCGCTTCTA
ATGGTGAGACAAGAGATGGAGAGAAGAGGTGCCTGCTGTGAAACGCACAT
GTTTCAAGTCGACTTTCCGCTATCCCCACCCTTTAAGAGTACCGAATGAG
GAAGTAACCGGATATATTAGATGAGAGGGGATTTTCAGAGGACGGCAACG
ATTGGGCCGCGTCTCGAGGATTGCCCTGGTGCGGTGGACTAGTAGCACAG
GAAGGACGACCCACAATGTCGTCTAGGCTGTAGACGTGAAACGCTGTATG
TCATACCGCTGTAGAAGAAGGCACAGAGGAACACCGCAAGATCTCGTTTT
TTTTTGTGGTCTGGCGTGAAATAACAAGAGAGGTTTACATGGTGTGCATT
CATTGATGGGCTTCTTCGTTTCGTAACGTTGAGACCAAAAGGTCGAGGAG
AAAAAGGATCGATCATGCTGTCGAATTTGAACACCGTATGCATACGTACG
TTTGCATTTCCGAATTTTTGTCGACTTCACCAACGTCTACTTTGTCCTCC
CGTGCGCCCTTTTTCTTTCAGCTGGGCAAATTTCGAAAACAGCTGGAGGG
GCCGAAGTCGGGCTGA
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Coding sequence (CDS) from alignment at chr_00:11792096..11794511-

>Ec-00_007340.1 ID=Ec-00_007340.1|Name=Ec-00_007340.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=528bp|location=Sequence derived from alignment at chr_00:11792096..11794511- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGAGTTGGTCGTTGGCCAGAGGGTGAAGGTCCGCCCGAAGGCGGG
CCCGGCCCAGGAGGGCGTCGTGTACACCCACGACGCCCTCACGAACACCA
TCACGATCAAGCAGGACATCCCCAACACAAAGACGCACAGCACCATCCTG
GTGTACAATCGGGCGCACGTCCAGATCGACGTGGTGCCCGGAGCTCCCGT
GGTGGACGACTGCATGGCGTTGCCGAACATCAGCGGCCGGGAGTTGGACA
GGAAGGAGAACAAGGCACTCCAGGAAGCGACGAAGGCATGGGCACAGATC
AATCCGGGCGCCACCAACGAAGGACAAGCCATTTTCGACCTTTTCACCAA
GACTTTGGACTGCTCGTGGAGCGACCAGAGCATCGTGATCTTGGAGTCCG
TGAGGATAGACCCCCCCTACACGGCTGATAGTTGTCGCAGCTTGGATGGA
GACAAGCCAGGCCTCGACAGAGCGCTTCTAATGCTGGGCAAATTTCGAAA
ACAGCTGGAGGGGCCGAAGTCGGGCTGA
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Synonyms
The feature 'Ec-00_007340.1' has the following synonyms
Synonym
Esi0552_0014
Esi_0552_0014
LSm12