Ec-00_005550.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005550.1
Unique NameEc-00_005550.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length353
Homology
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BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 3.830e-101
Identity = 280/353 (79.32%), Postives = 284/353 (80.45%), Query Frame = 2 
Query:   56 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQDSTENKGEVPTQADKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAELSVPSTITXXXXXXXXXXXXXPPMTEANVATS-ERGTATTPVAPGAALPALPPPXXXXASLPTSFPEHPSHDGGMGVAMMHQQAKRQRRGESGAGGGDCSIPGAGAVPGVMAGVAAGAAVEGIVAMTPMDQESLAARSRSHVPHLIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLCDTTRVEGPMVVSQPSLHYSV 1111
            MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQ STENKGEVPTQADKAA                 XXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXX   T    ++  ERG ATTPVAPGAALPALPP XXXXASLPTSFPEHP HDGG G+AMMHQQAKRQRR ES A G D SI GAGAVPGVM GVAAGAAVE IVAM  MDQE+LAAR RSHVPHL QQQXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          QLCDTTRVEGPMVVSQPSLHYSV
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQGSTENKGEVPTQADKAAVITAAAPTSRHASVALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVATSVLPSSECERGKATTPVAPGAALPALPPXXXXXASLPTSFPEHPLHDGGTGMAMMHQQAKRQRREESAAAG-DGSISGAGAVPGVMVGVAAGAAVESIVAMPTMDQEALAARGRSHVPHLTQQQXXXXXXXXXXIMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------QLCDTTRVEGPMVVSQPSLHYSV 342
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BLAST of Ec-00_005550.1 vs. uniprot
Match: D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 6.800e-23
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 2 
Query:   56 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 199
            MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48
[Close]
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.360e-19
Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = 2 
Query:    2 RKKEARLAGLPKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQDSTENKGEVP 289
            RK+  +    PK A S++M+FS+HHR +L+ +N  ++F D+GK VG +WK+AT  +K+PF+DL+A D+ARYAREL EYK   L +Q++  +  + P
Sbjct:   81 RKERYKDPRAPKSATSAYMYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYKKERLAEQEAEVDSDDEP 176
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BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.860e-16
Identity = 38/70 (54.29%), Postives = 56/70 (80.00%), Query Frame = 2 
Query:   32 PKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKA 241
            PK A S++M+FS+HHR +L+ +N  ++F D+GK VG +WK+AT E+KRPF++L+AEDK RY  EL +YK+
Sbjct:  101 PKSATSAYMYFSKHHRMLLKQENSYLTFGDLGKTVGAMWKAATPEEKRPFEELAAEDKNRYVNELHDYKS 170
[Close]
BLAST of Ec-00_005550.1 vs. uniprot
Match: F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)

HSP 1 Score: 84.0 bits (206), Expect = 2.940e-16
Identity = 33/65 (50.77%), Postives = 53/65 (81.54%), Query Frame = 2 
Query:   41 AVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 235
            A S++M+FS+HHR +L+ +N +++F D+GK VG +WK+AT ++K+PF+DL+A D+ RY  EL+EY
Sbjct:   19 ATSAYMYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83
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BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A0S1MK77_PHAPC (HMG box domain-containing protein n=1 Tax=Phakopsora pachyrhizi TaxID=170000 RepID=A0A0S1MK77_PHAPC)

HSP 1 Score: 69.7 bits (169), Expect = 5.350e-11
Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 2 
Query:    2 RKKEARLAGLPKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 235
            R K+ +    PK  +S++M+FS+  R  ++ +N E+SF +IG+ +G  WKS +DE+K+P++D++  DK R+  E AEY
Sbjct:   24 RTKKEKDPNAPKRPLSAYMYFSQDWRERIKAENPEVSFGEIGRLLGQKWKSLSDEEKKPYEDMAGRDKKRHEAEKAEY 101
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BLAST of Ec-00_005550.1 vs. uniprot
Match: F4RQM9_MELLP (HMG box domain-containing protein (Fragment) n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RQM9_MELLP)

HSP 1 Score: 68.9 bits (167), Expect = 5.530e-11
Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 2 
Query:    2 RKKEARLAGLPKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEY 235
            R K  +    PK  +S++M+FS+  R  ++T+N E+SF +IG+ +G+ WKS  +E+K+P++D++  DK R+  E AEY
Sbjct:    3 RVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETEKAEY 80
[Close]
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A2T9Z5D4_9FUNG (HMG box domain-containing protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9Z5D4_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 2.520e-10
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2 
Query:    2 RKKEARLAGLPKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKA 241
            RKK+   A  PK  +S++M+FS+ +R  ++ +N   +F ++GK +G +WKS TDEQK+PF+  + +DK RY  E A Y+A
Sbjct:   12 RKKKDENA--PKRCLSAYMFFSQEYRGKVKKENPAATFGELGKILGEMWKSMTDEQKKPFNLKAEKDKKRYETEKANYQA 89
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BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A5C5G4Q3_9BASI (High mobility group box domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G4Q3_9BASI)

HSP 1 Score: 66.2 bits (160), Expect = 1.060e-9
Identity = 29/73 (39.73%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:   32 PKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLL 250
            PK  +S++M FS+  R++++ +N +++F +IGK +GV WK AT+  K+P+++ +  DK RY +E A Y   LL
Sbjct:   25 PKRPLSAYMHFSQDMRSVVKEENPDVTFGEIGKLLGVKWKEATENDKKPYEEKAKADKERYEKEKAAYDVRLL 97
[Close]
BLAST of Ec-00_005550.1 vs. uniprot
Match: A0A7S0K6X4_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K6X4_CAFRO)

HSP 1 Score: 66.2 bits (160), Expect = 1.270e-9
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 2 
Query:    2 RKKEARLAGLPKPAVSSFMWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKA 241
            + K AR  G PK A ++F  FS   RA ++  + E   +D+ K +G  W+  +D++K P+++L+AEDKARYARE AE+ A
Sbjct:   27 KTKRARKPG-PKRAATAFFIFSGKQRAAIKADHPEWGVTDVSKELGRQWRELSDDEKIPYNELAAEDKARYAREKAEFDA 105
The following BLAST results are available for this feature:
BLAST of Ec-00_005550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGF1_9PHAE3.830e-10179.32HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7G1C1_ECTSI6.800e-23100.00HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A8J2T2D7_9STRA1.360e-1945.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JW32_9STRA1.860e-1654.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YAN0_AURAN2.940e-1650.77HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A0S1MK77_PHAPC5.350e-1139.74HMG box domain-containing protein n=1 Tax=Phakopso... [more]
F4RQM9_MELLP5.530e-1139.74HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A2T9Z5D4_9FUNG2.520e-1042.50HMG box domain-containing protein n=2 Tax=Harpella... [more]
A0A5C5G4Q3_9BASI1.060e-939.73High mobility group box domain-containing protein ... [more]
A0A7S0K6X4_CAFRO1.270e-942.50Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:8849756..8852255 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.0
Seed ortholog evalue5.1e-12
Seed eggNOG ortholog44056.XP_009037344.1
Length1608
Hectar predicted targeting categoryother localisation
Gene idEc-00_005550.1
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006355,GO:0006357,GO:0006996,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0034622,GO:0034728,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071103,GO:0071824,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.DNA binding
EggNOG OGsCOG5648@1,KOG0381@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005550Ec-00_005550Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 8849756..8852255 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005550.1.1Ec-00_005550.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8849756..8849955 +
Ec-00_005550.1.2Ec-00_005550.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8850848..8852255 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0055505UTR:Ec-00_005550.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 8849756..8849811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005550.1CDS:Ec-00_005550.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 8849812..8849955 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0055503UTR:Ec-00_005550.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 8851763..8852255 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005550.1Ec-00_005550.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 8849812..8851762 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=353bp
MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDK
ARYARELAEYKAWLLLKQDSTENKGEVPTQADKAAAATTAAAPTSRHASV
APPAPAIAAAAAAATTTTTTTTPAAELSVPSTITTAATPVAPAPTPAPPM
TEANVATSERGTATTPVAPGAALPALPPPPLPPASLPTSFPEHPSHDGGM
GVAMMHQQAKRQRRGESGAGGGDCSIPGAGAVPGVMAGVAAGAAVEGIVA
MTPMDQESLAARSRSHVPHLIQQQQQQQQQQQYQQTQHSIMQHQRGQQQH
QHQHHQYQQQQQQQQQQQQQQQQQHQHQHQLCDTTRVEGPMVVSQPSLHY
SV*
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spliced messenger RNA

>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1608bp|location=Sequence derived from alignment at chr_00:8849756..8852255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GGCGGAAGAAAGAAGCTCGTCTGGCGGGATTGCCCAAGCCTGCCGTGAGC
TCGTTCATGTGGTTCTCTCGACACCATCGCGCGATCCTCAGGACTAAGAA
CCGCGAGATGAGCTTCAGCGATATCGGGAAGGCAGTGGGGGTGCTGTGGA
AGTCGGCAACGGATGAACAAAAGCGACCTTTTGACGACCTTTCCGCCGAG
GACAAAGCACGATACGCGCGCGAGCTTGCCGAGTACAAGGCATGGCTGCT
CCTCAAGCAAGACTCGACAGAAAACAAGGGGGAGGTGCCGACGCAGGCTG
ACAAGGCAGCAGCAGCAACAACGGCAGCAGCGCCGACATCAAGGCACGCC
TCTGTTGCCCCGCCCGCCCCAGCAATAGCAGCAGCAGCAGCAGCAGCAAC
AACAACAACAACAACAACAACACCGGCAGCTGAGTTGTCAGTGCCTTCCA
CAATCACGACTGCGGCAACACCCGTCGCTCCAGCCCCTACACCGGCGCCG
CCAATGACTGAAGCCAATGTCGCGACTAGCGAGCGTGGCACGGCTACTAC
CCCGGTCGCGCCTGGCGCCGCCCTTCCGGCCCTCCCGCCTCCGCCCCTCC
CGCCGGCGTCGCTCCCCACTTCCTTTCCCGAGCACCCGTCGCATGACGGC
GGCATGGGGGTGGCGATGATGCACCAGCAGGCTAAGCGACAGAGGCGAGG
GGAGAGTGGTGCTGGTGGTGGTGACTGTAGCATTCCCGGCGCGGGTGCAG
TGCCTGGTGTGATGGCCGGTGTTGCCGCTGGGGCAGCGGTCGAGGGTATT
GTTGCCATGACGCCGATGGATCAGGAGTCGCTGGCGGCGAGAAGCAGGAG
CCACGTCCCTCACCTCATACAGCAGCAGCAGCAGCAACAGCAGCAGCAGC
AGTATCAGCAAACGCAACACAGCATCATGCAACACCAACGAGGCCAACAA
CAACATCAGCATCAGCACCATCAGTACCAGCAGCAGCAGCAACAACAACA
ACAACAACAACAACAACAACAACAACAACATCAGCACCAGCACCAGCTAT
GCGATACCACGAGAGTGGAGGGACCCATGGTGGTTTCTCAGCCTTCTCTT
CATTACAGTGTTTGATATTTGTATTGGTTGTCGGTTGGACGCTCGACAGG
GGACGAGCGCTCCCTTGGAGATGAGTGATGGTTTCCTGGCCGCGAGGGAA
GGGGGAAGAGGAAGAGGCTAGAGCGAGGAGGAGAAACGGTAGAGTCAGAA
CATTTGTGCAGGATATGCAGGGAGAGATAGACTGTAGCGTTCATCAATTT
TCATCAACCGAGGGGGGAAGTTGACGCTAGGAGCTGGCTACGACATCGGA
AACAATAACGAAGACATATGCATATTAACGCGTAGCCTCAGTCGCGTTTT
CATGTGTCGGGGTCTTTCGACGTTCTTGGTCTGGCGGCCCTCTGTCCGTT
TGTAACTGGTACGCCACCACCCGCCCACACCTGATCTCCCGTATTGTGGG
GACGTTGTGTGACGTTGTGGGTTGGTGCGTTGTTTCAAGAGCCGTGCTCG
ATTTCGGACCCGGAATGTCGCACCGCCTAAGGGTGCGAGCACCTTTCGAC
ACCCAGGA
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protein sequence of Ec-00_005550.1

>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=353bp
MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDK
ARYARELAEYKAWLLLKQDSTENKGEVPTQADKAAAATTAAAPTSRHASV
APPAPAIAAAAAAATTTTTTTTPAAELSVPSTITTAATPVAPAPTPAPPM
TEANVATSERGTATTPVAPGAALPALPPPPLPPASLPTSFPEHPSHDGGM
GVAMMHQQAKRQRRGESGAGGGDCSIPGAGAVPGVMAGVAAGAAVEGIVA
MTPMDQESLAARSRSHVPHLIQQQQQQQQQQQYQQTQHSIMQHQRGQQQH
QHQHHQYQQQQQQQQQQQQQQQQQHQHQHQLCDTTRVEGPMVVSQPSLHY
SV*
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mRNA from alignment at chr_00:8849756..8852255+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2500bp|location=Sequence derived from alignment at chr_00:8849756..8852255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GGCGGAAGAAAGAAGCTCGTCTGGCGGGATTGCCCAAGCCTGCCGTGAGC
TCGTTCATGTGGTTCTCTCGACACCATCGCGCGATCCTCAGGACTAAGAA
CCGCGAGATGAGCTTCAGCGATATCGGGAAGGCAGTGGGGGTGCTGTGGA
AGTCGGCAACGGATGAACAAAAGCGACCTTTTGACGACCTTTCCGCCGAG
GTGTGTGTAACATGTAACGGCTTCGGGCCGTGCTACCTACCGCTCATATT
GTAGCAGCAAGAACGCTTCCAACCGCGGTAATAGAGTAGCACGCAGCAGA
CAAAGGCACGCAGAGCATAACGGTGACAACCTTCAAGCCCCAGCAGAAAT
CGTTTGGGCCTAGGCTACTGCTGCTGCTGCTGCAATCGGCGTGTAACCTA
CTAAATTAAATAGGAATTTGGGTGAGAACAAGAACGTGAATGACATCTCT
CATCGCAAGGAACCAAACCGACTCGGAACTACATCTAGCGTTGACCGACA
GCACTACACCGTCAAGTGCATGCCATGCCGACAGCAGTACACTGATCTCT
CGTTCAAAGCGGGTGTACCCCGCTTGACAGGGCTCGGTATTGTCGGAGAT
GGAACCAAGTTATATAGACGGATGTTTTGGGTGGTAAGGGCGTGGCCGGC
TTTTAGGGTTCCGTCGGAAAGACTCGGTCGACAATCGAGGAGGGGAGAGA
GGGCGGGAAGTCTGTCGCTTTCTCCTTGCCCTGCTCAATAGGATAATCGA
CCTCGCCATATGTACGACGGGGCAAGTCGAGGCGGGGTAGCTGGTGTGCT
TTTGGCTGCCCGCATTTGAAACAGCACAAATGTTCATCTCGGAGAGGCTT
TCGTGGTTTCATCTCTGGGTTGTATCACGACTGCTGTGAATCTGCAAACC
TCTAAACAGGCAAGGTGGATCCAAATAAATAGAGGGGTGGGATGCGGTAG
TTATTTCTTTCTCCCTTGTTTCTTGTTTCGTGGTATACTTGCCAAACGCT
CACGTGTACCGTGCTCCCTCCCCTTCTTACGAATGTGTCGCTGCTGCTAC
GGCCACGGCGGTGTGTGTGTGTATGTGTGTTTTCATTCACAGGACAAAGC
ACGATACGCGCGCGAGCTTGCCGAGTACAAGGCATGGCTGCTCCTCAAGC
AAGACTCGACAGAAAACAAGGGGGAGGTGCCGACGCAGGCTGACAAGGCA
GCAGCAGCAACAACGGCAGCAGCGCCGACATCAAGGCACGCCTCTGTTGC
CCCGCCCGCCCCAGCAATAGCAGCAGCAGCAGCAGCAGCAACAACAACAA
CAACAACAACAACACCGGCAGCTGAGTTGTCAGTGCCTTCCACAATCACG
ACTGCGGCAACACCCGTCGCTCCAGCCCCTACACCGGCGCCGCCAATGAC
TGAAGCCAATGTCGCGACTAGCGAGCGTGGCACGGCTACTACCCCGGTCG
CGCCTGGCGCCGCCCTTCCGGCCCTCCCGCCTCCGCCCCTCCCGCCGGCG
TCGCTCCCCACTTCCTTTCCCGAGCACCCGTCGCATGACGGCGGCATGGG
GGTGGCGATGATGCACCAGCAGGCTAAGCGACAGAGGCGAGGGGAGAGTG
GTGCTGGTGGTGGTGACTGTAGCATTCCCGGCGCGGGTGCAGTGCCTGGT
GTGATGGCCGGTGTTGCCGCTGGGGCAGCGGTCGAGGGTATTGTTGCCAT
GACGCCGATGGATCAGGAGTCGCTGGCGGCGAGAAGCAGGAGCCACGTCC
CTCACCTCATACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTATCAG
CAAACGCAACACAGCATCATGCAACACCAACGAGGCCAACAACAACATCA
GCATCAGCACCATCAGTACCAGCAGCAGCAGCAACAACAACAACAACAAC
AACAACAACAACAACAACAACATCAGCACCAGCACCAGCTATGCGATACC
ACGAGAGTGGAGGGACCCATGGTGGTTTCTCAGCCTTCTCTTCATTACAG
TGTTTGATATTTGTATTGGTTGTCGGTTGGACGCTCGACAGGGGACGAGC
GCTCCCTTGGAGATGAGTGATGGTTTCCTGGCCGCGAGGGAAGGGGGAAG
AGGAAGAGGCTAGAGCGAGGAGGAGAAACGGTAGAGTCAGAACATTTGTG
CAGGATATGCAGGGAGAGATAGACTGTAGCGTTCATCAATTTTCATCAAC
CGAGGGGGGAAGTTGACGCTAGGAGCTGGCTACGACATCGGAAACAATAA
CGAAGACATATGCATATTAACGCGTAGCCTCAGTCGCGTTTTCATGTGTC
GGGGTCTTTCGACGTTCTTGGTCTGGCGGCCCTCTGTCCGTTTGTAACTG
GTACGCCACCACCCGCCCACACCTGATCTCCCGTATTGTGGGGACGTTGT
GTGACGTTGTGGGTTGGTGCGTTGTTTCAAGAGCCGTGCTCGATTTCGGA
CCCGGAATGTCGCACCGCCTAAGGGTGCGAGCACCTTTCGACACCCAGGA
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Coding sequence (CDS) from alignment at chr_00:8849756..8852255+

>Ec-00_005550.1 ID=Ec-00_005550.1|Name=Ec-00_005550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1059bp|location=Sequence derived from alignment at chr_00:8849756..8852255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGGTTCTCTCGACACCATCGCGCGATCCTCAGGACTAAGAACCGCGA
GATGAGCTTCAGCGATATCGGGAAGGCAGTGGGGGTGCTGTGGAAGTCGG
CAACGGATGAACAAAAGCGACCTTTTGACGACCTTTCCGCCGAGGACAAA
GCACGATACGCGCGCGAGCTTGCCGAGTACAAGGCATGGCTGCTCCTCAA
GCAAGACTCGACAGAAAACAAGGGGGAGGTGCCGACGCAGGCTGACAAGG
CAGCAGCAGCAACAACGGCAGCAGCGCCGACATCAAGGCACGCCTCTGTT
GCCCCGCCCGCCCCAGCAATAGCAGCAGCAGCAGCAGCAGCAACAACAAC
AACAACAACAACAACACCGGCAGCTGAGTTGTCAGTGCCTTCCACAATCA
CGACTGCGGCAACACCCGTCGCTCCAGCCCCTACACCGGCGCCGCCAATG
ACTGAAGCCAATGTCGCGACTAGCGAGCGTGGCACGGCTACTACCCCGGT
CGCGCCTGGCGCCGCCCTTCCGGCCCTCCCGCCTCCGCCCCTCCCGCCGG
CGTCGCTCCCCACTTCCTTTCCCGAGCACCCGTCGCATGACGGCGGCATG
GGGGTGGCGATGATGCACCAGCAGGCTAAGCGACAGAGGCGAGGGGAGAG
TGGTGCTGGTGGTGGTGACTGTAGCATTCCCGGCGCGGGTGCAGTGCCTG
GTGTGATGGCCGGTGTTGCCGCTGGGGCAGCGGTCGAGGGTATTGTTGCC
ATGACGCCGATGGATCAGGAGTCGCTGGCGGCGAGAAGCAGGAGCCACGT
CCCTCACCTCATACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTATC
AGCAAACGCAACACAGCATCATGCAACACCAACGAGGCCAACAACAACAT
CAGCATCAGCACCATCAGTACCAGCAGCAGCAGCAACAACAACAACAACA
ACAACAACAACAACAACAACAACATCAGCACCAGCACCAGCTATGCGATA
CCACGAGAGTGGAGGGACCCATGGTGGTTTCTCAGCCTTCTCTTCATTAC
AGTGTTTGA
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Synonyms
The feature 'Ec-00_005550.1' has the following synonyms
Synonym
Esi0446_0014
Esi_0446_0014