Ec-00_005540.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_005540.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI) HSP 1 Score: 760 bits (1963), Expect = 1.340e-274 Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERALATAVGSEGGGGGEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELSLTMGTWGGRGGGGERERWARLEHYLHWFWVVFFGVIFVHMSRIQ 1404 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERALATAVGSEGGGGGEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELSLTMGTWGGRGGGGERERWARLEHYLHWFWVVFFGVIFVHMSRIQ Sbjct: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERALATAVGSEGGGGGEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELSLTMGTWGGRGGGGERERWARLEHYLHWFWVVFFGVIFVHMSRIQ 468
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A6H5JKZ3_9PHAE (Ge1_WD40 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 1.460e-137 Identity = 296/315 (93.97%), Postives = 298/315 (94.60%), Query Frame = 1 Query: 199 MDLEARLDQAQQDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERALATAVGSEGGGGGEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 1143 M+LEARLDQAQ DLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ES+AFAPESAER LATAVG RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK Sbjct: 1 MELEARLDQAQDDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAFAPESAERTLATAVG-------------RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 302
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A5D6Y4C8_9STRA (Lissencephaly-1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4C8_9STRA) HSP 1 Score: 319 bits (818), Expect = 3.190e-101 Identity = 229/460 (49.78%), Postives = 288/460 (62.61%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGL-EDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLK---SGVRPGREKGAGGSDR--VLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAG--DTXXXXXXXXXXXXXEAATGFCTRTLKGD-SEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESA-----ERALATAVGSEG----------GGG------------GEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELS 1272 MVLT+KQR D+H +L+Y+ G GE FAD+AAAF G+ + A G + GLLEKKWTSV+RLQRKVM+LE++L Q ++ + G+ RE+ G R LPRAP + L+GHR+PVT VA HP++SV AS SEDATVKVWD+E+GE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECLKTLRGHDHNV V + PPA D E ATG+C TL G S+WVR VA+SDDG VVES+AFA A ERA A + + G GGG G G+ R +F+ SGSRD+TV+LW A G LM F+ HENWVRCV HP G +V+S ++DR++R +D++TGRC R L++AH H +T+ +H + P++V+GG+D ++VWE S Sbjct: 1 MVLTEKQRQDLHQSVLDYLSGMGERFADSAAAFERDAGISKSADGKHA--GLLEKKWTSVIRLQRKVMELESKLQQLEESARLGGGGIVSRREQLGGARPRSEFLPRAPPQFALSGHRSPVTSVAFHPVFSVFASGSEDATVKVWDFESGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDGD--YECLKTLRGHDHNVCGVVFAPPAAGEDLLYSCSRDNTVKVWELATGYCVNTLNGGHSDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQAIREHEHVVESVAFARSGAQEQAVERAHAKKLAAVGAVLGNGDAAAGGGTGPHVAADVGDVGAGSRRVKFLVSGSRDRTVRLWEAFSGALLMNFASHENWVRCVRFHPCGKYVISVAEDRTLRVYDIETGRCVRTLDEAHAHFLTSADVHPSLPLIVTGGIDKVINVWECS 456
BLAST of Ec-00_005540.1 vs. uniprot
Match: K3WAC5_GLOUD (Lissencephaly-1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAC5_GLOUD) HSP 1 Score: 305 bits (782), Expect = 1.030e-95 Identity = 227/469 (48.40%), Postives = 283/469 (60.34%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGL-EDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLK--SGVRPGREK---GAGGSDR--VLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAG--DTXXXXXXXXXXXXXEAATGFCTRTLKGD-SEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESA-----ERALATAVGSEGG----GGGEG------------------------AVRR-RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELS 1272 MVLT+KQR D+H ML+Y+ G GE FAD AAAF G+ + A G + GLLEKKWTSV+RLQRKVM+LE ++ ++ K +GV R+ G GG R LPRAP K LTGHR+PVTCVA HP++SV AS SEDATVKVWD+ETGE ERTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G ECLKTLRGHDHNV V + P D E +TG+C TL G S+WVR VA+SDDG VVES+ FA A E+A A + + G G GE +VRR +F+ SGSRD+TV+LW A G LM F+ HENWVRCV HP G + +SA++D+++R +D++TGRC R L++AH H +T++ +H T P+++SG +D ++VWE S Sbjct: 1 MVLTEKQRQDLHQSMLDYLHGMGERFADTAAAFEREAGITKSADGKHA--GLLEKKWTSVIRLQRKVMELENKVQLLEETAKLGNGVVSRRDLLGGGIGGRPRSEFLPRAPPKYALTGHRSPVTCVAFHPVFSVFASGSEDATVKVWDFETGEYERTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGD--YECLKTLRGHDHNVCGVVFAPATAGEDLLYSCSRDHTIKVWEISTGYCVNTLNGGHSDWVRDVAVSDDGLYLATCGNDRSILLWDLQHMRVLQSIREHEHVVESVTFAKSGAQELAIEKAHAKKLVAAGAVVAIGNGEAVARSPEDALTTDMVVDVTNASTSSSVRRVKFLLSGSRDRTVRLWEAFSGTLLMNFASHENWVRCVRFHPCGKYAISAAEDKTIRVYDLETGRCVRTLDEAHSHFLTSVDVHPTLPLMISGSIDKLINVWECS 465
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A2D4CDK0_PYTIN (Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDK0_PYTIN) HSP 1 Score: 297 bits (761), Expect = 8.380e-93 Identity = 209/450 (46.44%), Postives = 277/450 (61.56%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLK-SGVRPGREKGAGGSDRV--LPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVP-PAGDTXXXXXXXXXXXXXEAATGFCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESA-ERAL----------ATAVGSEGGGGGEGAV----------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWELS 1272 MVLT+KQR D+H ML+Y+ G+ FAD AAAF G+ + + +LEKKWTSV+RLQ+KVM+LE+++ Q ++ K G+ R+ GG R LPRAP K L+GHRNP+TCVA HP++SV S SEDAT+KVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECLKTLRGHDHNV +A+ P P D E +TG+C T+ G ++WVR + +SDDG VVES+ FA A E+A+ ++ SE G G+ + +F+ SGSRD+TV+LW A LM+FS HENWVRCV HP G + +S ++DR++R D++TGRC R ++ AH H +T+L +H + P++++GG+D ++VWE + Sbjct: 1 MVLTEKQRQDLHQSMLDYLVAMGDRFADTAAAFEREAGITQSHDGKH-ADMLEKKWTSVLRLQKKVMELESKIKQLEESSKLGGIVSRRDVLGGGRSRAEFLPRAPCKYSLSGHRNPITCVAFHPVFSVFVSGSEDATIKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLKTLRGHDHNVCGLAFSPLPDSDRLYSCSRDHTIKVWEISTGYCLHTMNNGHADWVRDICVSDDGLYLASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKFHAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIKFLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWECA 447
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A484E3V1_BRELC (Lissencephaly-1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3V1_BRELC) HSP 1 Score: 297 bits (760), Expect = 1.640e-92 Identity = 217/459 (47.28%), Postives = 271/459 (59.04%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDRV--LPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPP-AGDTXXXXXXXXXXXXXEAATGFCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERAL---------ATAVGSEGGGGGEGAV------------------------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 1266 MVLT KQRHD+H ML+Y+ G GE FA AAAAF + ++ + GLLEKKWTSV+RLQRKVM+LE +L Q +++ K G R G R LPRAPAK LTGHR+P+TCV HP++SV+ S SEDA+VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECL+TLRGHDHNV + + P A D E +TG+C TL G ++WVR VA+S DG VVES+ FA E+ + AT S G V R + + SGSRD+TV+LW A G L+ F+ HENWVR V HPSG + LSA +D+++R FD+++GRC R L++AH H VT L +H + P++VSGG+D ++VWE Sbjct: 1 MVLTDKQRHDLHQAMLDYLVGMGERFAAAAAAFENEADISKSSDGKH-AGLLEKKWTSVIRLQRKVMELETKLAQFEENAKVGGVLSRRDMLGARQRTEFLPRAPAKLSLTGHRSPITCVLFHPVFSVLVSGSEDASVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNTGHTDWVRDVAVSHDGLYLASCGNDRSILFWDLPHMRILQSIREHEHVVESVVFAKAGQEQVIEKIYAKKLAATGHFSPANGSSFAEVNNRVTDSTAGEPSGVAVVSKPTIRRMKILLSGSRDRTVRLWEAFTGTQLIVFASHENWVREVRFHPSGKYALSAGEDKTIRVFDIESGRCVRTLDEAHSHFVTCLDVHPSLPLIVSGGIDKIINVWE 456
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A8K1CCN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCN7_PYTOL) HSP 1 Score: 288 bits (737), Expect = 1.800e-89 Identity = 217/428 (50.70%), Postives = 279/428 (65.19%), Query Frame = 1 Query: 43 MLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLK-SGVRPGREKGAGGSDRV--LPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPA-GDTXXXXXXXXXXXXXEAATGFCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAP-----ESAERALATAVGSEGG-------GGGE---GAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 1266 ML+YM G+ FA+ AAAF G+ + + GLLEKKWTSV+RLQRKVM+LE ++ Q ++ K G+ R+ GG + LPR P K LTGHRNP+TCVA HP++SV+ SSSEDAT+KVWD+ETGE ERT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECLKTLRGHDHNV + + P A D XXXXXXXXXXXXX +TG+C T+ G ++WVR + +SDDG VVES+ FA ++ E+ LA + S G G E G + +F+ SGSRD+TV+LW A G LM F+ HENWVRCV HP G +V+S ++D+++R FD++TGRC R +++AHGH +T+L +H T P++V+G +D ++VWE Sbjct: 1 MLDYMIAMGDRFAETAAAFEREAGVTRSPDAKQ-AGLLEKKWTSVIRLQRKVMELEGKVKQLEESSKLGGIVSRRDVVGGGRSKAEFLPRGPPKYSLTGHRNPITCVAFHPVFSVIVSSSEDATIKVWDFETGEFERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGE--YECLKTLRGHDHNVCGLVFAPSAESDXXXXXXXXXXXXXXXISTGYCLHTMSNGHADWVRNITVSDDGLYLASCGNDRAILFWDLQHHRVLQALREHDHVVESVVFAKSGPQEQAIEKFLAPKLASVVGAPLDAANGSAELSAGPRKVKFILSGSRDRTVRLWEAFSGTMLMNFASHENWVRCVRFHPCGKYVVSVAEDKTIRVFDIETGRCVRTVDEAHGHFLTSLDVHPTLPLMVTGSIDKLINVWE 425
BLAST of Ec-00_005540.1 vs. uniprot
Match: F0WCC4_9STRA (Lissencephaly-1 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCC4_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.940e-89 Identity = 218/455 (47.91%), Postives = 279/455 (61.32%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLE-DATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGS-DRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTL-KGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAER---------------------ALATAVGSEGGGGGEGAV---------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 1266 MVLT KQ+ D+H +L+Y+ G GE F + +AAF + A G + GLLEKKWTSV+RLQ+KVM+LEA++ Q ++ K G R G LPRAP K L+GHR+P+TCV HP++SV+ S SEDAT+KVWD+E GE ERTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G EC++TLRGHDHNVSCV + + + +TG+CT+TL G ++W+R +AL+DD XXXXXXXXXXX V+E I F+ + E A+ SE E V + R++ SGSRD+TV+LW A G LM F+ HENWVR V HPSG +V+SA++D+SVR FD++TGRC R L DAH H VT L +H T P+++SGG+D ++VWE Sbjct: 1 MVLTDKQQQDLHQSILDYLNGMGERFTETSAAFEREANIHRSADGKHA--GLLEKKWTSVLRLQKKVMELEAKVHQMEEAAKLGNVISRRDVVGPHRSACLPRAPRKFELSGHRSPITCVIFHPVFSVLVSGSEDATLKVWDFEMGEYERTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GVEGNYECIRTLRGHDHNVSCVIFDTIQNERIITCSRDQQIKLWDISTGYCTKTLVNGHTDWIRDIALTDDSQLLASXXXXXXXXXXXMQTFRPIQTIREHEHVIECITFSKTAVEHRGTEKAVSRKVAPAGLANSPAAMMILANSENRDTAENGVHLDHGKAPKKLRYLLSGSRDRTVRLWEALSGVLLMNFTQHENWVRMVRFHPSGKYVISAAEDKSVRVFDIETGRCVRTLLDAHTHFVTCLDIHPTLPLLISGGIDKVINVWE 451
BLAST of Ec-00_005540.1 vs. uniprot
Match: A0A329RP37_9STRA (Lissencephaly-1 homolog n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A329RP37_9STRA) HSP 1 Score: 285 bits (730), Expect = 5.240e-88 Identity = 220/461 (47.72%), Postives = 265/461 (57.48%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDRV--LPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPP-AGDTXXXXXXXXXXXXXEAATGFCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAER--------------ALATAVGS------------EGGGGGEGAV---------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 1266 MVLT KQR D+H ML+Y+ G GE FAD AAAF + ++ + GLLEKKWTSV+RLQRKVM+LE +L Q +++ K G R G R LPRAPAK LTGHR+P+TCVA HP++SV+ S SEDA+VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECL+TLRGHDHNV + + P A D E +TG+C TL G ++WVR VA+SDDG VVES+ FA E+ ALA A GS G GAV R +F+ SGSRD+TV+LW A G LM F+ HENWVR V HPSG + LSA +D+++R FDV TGRC R L++AH H VT L + ++VWE Sbjct: 1 MVLTDKQRQDLHQAMLDYLVGMGERFADTAAAFEKEADVTKSSDGKH-AGLLEKKWTSVIRLQRKVMELETKLAQLEENAKLGGVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHTDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALAPANGSVSPKSNNHDMTASSAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMMFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXXIINVWE 458
BLAST of Ec-00_005540.1 vs. uniprot
Match: H3H2U3_PHYRM (Lissencephaly-1 homolog n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3H2U3_PHYRM) HSP 1 Score: 285 bits (729), Expect = 7.600e-88 Identity = 218/462 (47.19%), Postives = 267/462 (57.79%), Query Frame = 1 Query: 1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKGAGGSDR--VLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPP-AGDTXXXXXXXXXXXXXEAATGFCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAP-----ESAERALATAVGSEGG----------------------GGGEGAV---------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 1266 MVLT KQR D+H M++Y+ G GE FAD+AAA G+ ++ + GLLEKKWTSV+RLQRKVM+LE +L Q +++ K G R G R LPRAPAK LTGHR+P+TCVA HP++SV+ S+SEDA VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS G ECL+TLRGHDHNV + + P A D E +TG+C TL G S+WVR VA+SDDG VVES+ FA + ERA A + + G G GAV R +F+ SGSRD+TV+LW A G LM F+ HENWVR V HPSG + LSA +D+++R FD++TGRC R L+DAH H VT L + ++VWE Sbjct: 1 MVLTDKQRQDLHQAMIDYLVGMGERFADSAAALEKEAGVTKSSDGKH-AGLLEKKWTSVIRLQRKVMELETKLAQLEENTKLGGVLSRRDVLGARQRSEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSASEDAAVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHSDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGIQEQVIERAHAKKLATTGALTPSNGSSLPESNNHDMTSSTAGEPTGAVAATTVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKTIRVFDIETGRCVRTLDDAHSHFVTCLDVXXXXXXXXXXXXXXIINVWE 459 The following BLAST results are available for this feature:
BLAST of Ec-00_005540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_005540.1 ID=Ec-00_005540.1|Name=Ec-00_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=469bpback to top spliced messenger RNA >Ec-00_005540.1 ID=Ec-00_005540.1|Name=Ec-00_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1407bp|location=Sequence derived from alignment at chr_00:8838001..8849127- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGGTGCTTACCCAGAAGCAACGGCATGATATGCACGTGGGGATGCTCGAback to top protein sequence of Ec-00_005540.1 >Ec-00_005540.1 ID=Ec-00_005540.1|Name=Ec-00_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=469bp MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGback to top mRNA from alignment at chr_00:8838001..8849127- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_005540.1 ID=Ec-00_005540.1|Name=Ec-00_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11127bp|location=Sequence derived from alignment at chr_00:8838001..8849127- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:8838001..8849127- >Ec-00_005540.1 ID=Ec-00_005540.1|Name=Ec-00_005540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1407bp|location=Sequence derived from alignment at chr_00:8838001..8849127- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_005540.1' has the following synonyms
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