Ec-00_005510.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005510.1
Unique NameEc-00_005510.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length114
Homology
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BLAST of Ec-00_005510.1 vs. uniprot
Match: D7G197_ECTSI (Exostoses (Multiple) 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G197_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 1.380e-77
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 
Query:    1 MFIWGLLSTEGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRITIEILSERLGYHRP 339
            MFIWGLLSTEGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRITIEILSERLGYHRP
Sbjct:    1 MFIWGLLSTEGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRITIEILSERLGYHRP 113
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 6.280e-30
Identity = 55/93 (59.14%), Postives = 74/93 (79.57%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEV-PQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRITIEILSERLGYH 333
            + +SAGAIPV VVRDW+KPF E++DW SFSF FSPD+V P M+E LR++  A+  EMQR+++ AYWKI+GG TNYS I+   I++L +R+GYH
Sbjct:  435 EVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTNYSVIASNAIDMLVQRIGYH 527
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 7.300e-22
Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEV-PQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRITIEILSERLGYHR 336
            + +SAGAIPV V RD V+PFPE+VDW + SF+F P+EV P M++ LRS++ AE   MQR++++A+++I+G    Y  I+R+ ++ L  R+GYHR
Sbjct:  443 EVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYHR 536
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.040e-17
Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 1 
Query:   28 EGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVP-QMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTN-YSWISRITIEILSERLGYHR 336
             GP    L  + +SAG+IPV V RD V PF E++DW S SF F+PDEV  +M+  L ++  A+ EEMQR+++EAY +++G   N +   +RI + IL  RLG+ R
Sbjct:  138 RGPATYRLG-EVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRR 241
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.320e-16
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVP-QMIEVLRSLSMAETEEMQRRAIEAYWKIYG-GTTNYSWISRITIEILSERL 324
            + +SAG+IPV V  D V PF E +DWSSFSF F+PD+V  QM+  LR++  AE E+MQR+++EAY +I+G    ++   +RI +E L  RL
Sbjct:  335 EVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRL 425
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.340e-16
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:   28 EGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVP-QMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTN-YSWISRITIEILSERLGYHR 336
             GP    L  + +SAG IPV V RD V PF E++DW S SF F+PDEV  +M++ L ++  A+ EEMQR+++EAY K++G   N +   ++I + I+  RLG  R
Sbjct:  323 RGPATYRLG-EVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLGLWR 426
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: A0A6H5KJY5_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY5_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.620e-15
Identity = 38/92 (41.30%), Postives = 61/92 (66.30%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYG-GTTNYSWISRITIEILSERLGY 330
            +ALSAGAIPV + +D+VKPFP ++ WS FSF+F P+E P+++E LR++   +  +MQ  A+E +   +G G  N   +    ++IL +RL +
Sbjct:   21 EALSAGAIPVFIHQDFVKPFPGQIPWSEFSFSFPPEEAPRILETLRAVPDKKLAQMQVTALEVFDTYFGPGMGN---MLHTVLDILEDRLHF 109
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 8.630e-15
Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYG-GTTNYSWISRITIEILSERL 324
            +ALSAGA+PV + +D+VKPFP K+ WS FSF+F P+EVP+M++ LR++   E  +MQ  A+E +   +G G  N   +    ++IL +RL
Sbjct:  497 EALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEVPRMLKTLRAVPDRELAQMQATALEVFDTYFGPGMDN---MLHTVLDILEDRL 583
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.530e-14
Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEV-PQMIEVLRSLSMAETEEMQ 228
            + +SAGAIPV VVRDW+KPF E++DW SFSF FSPD+V P M+E LR++  A   EMQ
Sbjct:  130 EVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
[Close]
BLAST of Ec-00_005510.1 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 4.880e-13
Identity = 38/92 (41.30%), Postives = 61/92 (66.30%), Query Frame = 1 
Query:   58 KALSAGAIPVIVVRDWVKPFPEKVDWSSFSFTFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYG-GTTNYSWISRITIEILSERLGY 330
            +ALSAGA+PV + +D+VKPFP +V WS FSF+F P+E P+++E LR++   +  +MQ  A+E +   +G G  N   +    ++IL +RL +
Sbjct:  464 EALSAGALPVFIHQDFVKPFPGQVPWSEFSFSFPPEEAPRILETLRAVPDKKLAQMQVTALEVFDTYFGPGMGN---MLHTVLDILEDRLHF 552
The following BLAST results are available for this feature:
BLAST of Ec-00_005510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G197_ECTSI1.380e-77100.00Exostoses (Multiple) 2 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L9T2_9PHAE6.280e-3059.14GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JRU9_9PHAE7.300e-2248.94GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G4H7_ECTSI1.040e-1744.76Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JGQ8_9PHAE2.320e-1648.35GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KKV6_9PHAE4.340e-1643.81GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJY5_9PHAE7.620e-1541.30Exostosin domain-containing protein n=1 Tax=Ectoca... [more]
D8LNT2_ECTSI8.630e-1544.44Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LQY4_ECTSI3.530e-1462.07Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7FXN9_ECTSI4.880e-1341.30Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:8796298..8797925 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.0
Seed ortholog evalue4.8e-20
Seed eggNOG ortholog2880.D7FYQ6
Preferred nameEXTL1
Length342
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
Gene idEc-00_005510.1
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005510Ec-00_005510Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 8795326..8797925 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005510.1.3Ec-00_005510.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8796298..8796411 -
Ec-00_005510.1.2Ec-00_005510.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8797210..8797377 -
Ec-00_005510.1.1Ec-00_005510.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8797866..8797925 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005510.1CDS:Ec-00_005510.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 8796298..8796411 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005510.1Ec-00_005510.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 8796298..8797925 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005510.1 ID=Ec-00_005510.1|Name=Ec-00_005510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=114bp
MFIWGLLSTEGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSF
TFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRIT
IEILSERLGYHRP*
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spliced messenger RNA

>Ec-00_005510.1 ID=Ec-00_005510.1|Name=Ec-00_005510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=342bp|location=Sequence derived from alignment at chr_00:8796298..8797925- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCATTTGGGGGCTCCTCTCGACGGAAGGACCCCAACAGCAGGGCTT
GGCGCTTAAGGCTTTGAGCGCTGGCGCCATACCTGTGATTGTGGTGAGGG
ATTGGGTGAAACCTTTCCCGGAGAAGGTGGACTGGTCTTCGTTCTCCTTC
ACCTTTAGCCCAGATGAAGTGCCTCAAATGATCGAGGTCCTGAGATCACT
CTCTATGGCAGAGACAGAGGAAATGCAGCGCAGAGCGATCGAGGCATATT
GGAAAATTTACGGCGGCACGACGAACTATTCCTGGATTTCTAGAATCACC
ATCGAGATTCTTAGCGAACGGCTGGGATACCACAGGCCATGA
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protein sequence of Ec-00_005510.1

>Ec-00_005510.1 ID=Ec-00_005510.1|Name=Ec-00_005510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=114bp
MFIWGLLSTEGPQQQGLALKALSAGAIPVIVVRDWVKPFPEKVDWSSFSF
TFSPDEVPQMIEVLRSLSMAETEEMQRRAIEAYWKIYGGTTNYSWISRIT
IEILSERLGYHRP*
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mRNA from alignment at chr_00:8796298..8797925-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005510.1 ID=Ec-00_005510.1|Name=Ec-00_005510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1628bp|location=Sequence derived from alignment at chr_00:8796298..8797925- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCATTTGGGGGCTCCTCTCGACGGAAGGACCCCAACAGCAGGGCTT
GGCGCTTAAGGTAGGATACTGGATGGGGCATTCTGTGTGCAATTGCTTCG
ACATCACATCGCTCTGCTGGTTAGAAACCGATGTTGACAGAAAGATTACA
CTTTCCCTCGAACAAACAAGTTGAAGGTTTTGTTGTCGAGGAGTTCGACG
GAAGAATCACGATTTTTTGTCGCGGTTCAGCCGGGAAATCTAAACACAAC
CTCGGGGACTTTGTGAATTTTGATGTAACGCGCAATAAATTTGCCGTGAC
GTGTCACCTTTTGATTCGAGCACAGTCCCAGTACTAAATGCTATTTATCT
TTGTTTCGGCGTGTTGGTGTAGTCATTTGCTTCCTCTTCGATTCGAGTCA
ACCCTGCATATCGGACGGTCAATGAAGAGACAAACGAAAAGTTCTCTCTC
GCCAGCAGGGCAAGTGTGTACGAAAGGCCTTCTCCGCCACAGCCCACCAA
CGCAAACACGTTTTTCCACGTTGTCCGGGAAAAAATCACCGTCTTCAGGC
TTTGAGCGCTGGCGCCATACCTGTGATTGTGGTGAGGGATTGGGTGAAAC
CTTTCCCGGAGAAGGTGGACTGGTCTTCGTTCTCCTTCACCTTTAGCCCA
GATGAAGTGCCTCAAATGATCGAGGTCCTGAGATCACTCTCTATGGCAGA
GACAGAGGAAATGCAGGTGAGTTGTATGGCGCTTGACACGGAACTGGCGA
CGCCTGGAGTACCGTCTTCAAACAACTTTGGAAAAAAAAGACTATTGATT
TCTTTACAGTCAGGTTCTGGTCTGAATCTAAGATATTAGGAGTACTGGAA
CAAATGATCGAAAACGACCTTCCGGCCGAGAGTGGGCATGTTTGTTGGGA
AACCAGTAAACGACATGCAGCAGTAGCAACCGTTCGCATGGCCAGGTAAG
TTGTTGGGACCGTCCTGTGCCGGGAGGCTGCAGGTGCGCCATTACATACC
TACAAATCCGAATGGTACGACCCAGAATTCGACACGGATGTATTTGGGAA
CGTTTCGGTCTGCACTACTCCAGCTGCAGCCTTCCGACGGCACGGCCCGA
GCAACGAACGTGGGCGGTCGACTAGTCGCCACTTCATGATATCCCGTACT
GATTCCCCACCGAATATCCGCCGTGTCGCCTGCGTGTCGTCATAGTCAAG
TCTAGGTTTTAGATAAGAAACGTGAAGAAAACACTTCCTTACCCCTGGTC
TGTGGGAGAACTGGAGTACTTTTCCACACTTCCACACTGGTGTCACGCAT
CCGCGTGTGATCAATCCTTGTGTGCTCTTCTTCCGCGGTCGTTGTCGAAA
TCAGTGAAAACCAAGCTCGGCTGATCATCACTCCCCCCCTTTGATATGTA
ACTGCCGATGCTTTACGAAGTGGATTCGTACTTGGTCGAACATTCCATGG
GTCGTTCGCAGCTAATGTTTGCATTATCGACGTCCCGCGCTTCTACCCCC
GTTGCTTTCCCCAGCGCAGAGCGATCGAGGCATATTGGAAAATTTACGGC
GGCACGACGAACTATTCCTGGATTTCTAGAATCACCATCGAGATTCTTAG
CGAACGGCTGGGATACCACAGGCCATGA
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Coding sequence (CDS) from alignment at chr_00:8796298..8797925-

>Ec-00_005510.1 ID=Ec-00_005510.1|Name=Ec-00_005510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=342bp|location=Sequence derived from alignment at chr_00:8796298..8797925- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCATTTGGGGGCTCCTCTCGACGGAAGGACCCCAACAGCAGGGCTT
GGCGCTTAAGGCTTTGAGCGCTGGCGCCATACCTGTGATTGTGGTGAGGG
ATTGGGTGAAACCTTTCCCGGAGAAGGTGGACTGGTCTTCGTTCTCCTTC
ACCTTTAGCCCAGATGAAGTGCCTCAAATGATCGAGGTCCTGAGATCACT
CTCTATGGCAGAGACAGAGGAAATGCAGCGCAGAGCGATCGAGGCATATT
GGAAAATTTACGGCGGCACGACGAACTATTCCTGGATTTCTAGAATCACC
ATCGAGATTCTTAGCGAACGGCTGGGATACCACAGGCCATGA
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Synonyms
The feature 'Ec-00_005510.1' has the following synonyms
Synonym
Esi0443_0018
Esi_0443_0018