Ec-00_005460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005460.1
Unique NameEc-00_005460.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length117
Homology
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BLAST of Ec-00_005460.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 7.650e-69
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.610e-61
Identity = 104/123 (84.55%), Postives = 115/123 (93.50%), Query Frame = 2 
Query:   11 PNTTQHKMAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            P+  Q  MAKTPSKKSAKAPKKAGDK +  KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    8 PSPPQSTMAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.950e-59
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGD-KKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAK PSKK+AKAPKKA D KK+  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.690e-58
Identity = 107/130 (82.31%), Postives = 116/130 (89.23%), Query Frame = 2 
Query:    5 FSPNTTQHK----MAKTPSKKSAKAPKKAGD-KKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            F+ + T+H     MAK PSKK+AKAPKKA D KK+  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  121 FASHCTKHSPTFTMAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250
[Close]
BLAST of Ec-00_005460.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 190 bits (483), Expect = 7.880e-58
Identity = 99/116 (85.34%), Postives = 110/116 (94.83%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSKK+AKAPKKAG K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 9.260e-58
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGDK--KRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSKKSAKAPKK G+K   R  KR ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118
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BLAST of Ec-00_005460.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 188 bits (478), Expect = 4.780e-57
Identity = 98/116 (84.48%), Postives = 108/116 (93.10%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSK+SAKAPKKA    ++ KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.250e-56
Identity = 100/116 (86.21%), Postives = 110/116 (94.83%), Query Frame = 2 
Query:   32 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSKK+A APKKAG K R+ KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGK-RSRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121
[Close]
BLAST of Ec-00_005460.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 181 bits (460), Expect = 2.830e-54
Identity = 100/120 (83.33%), Postives = 112/120 (93.33%), Query Frame = 2 
Query:   32 MAKTPSKKS-AKAPKKA--GDKK-RTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 379
            MAKTPSK++ AKA KKA  GDKK R+ KR ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120
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BLAST of Ec-00_005460.1 vs. uniprot
Match: A0A7S2U5X6_9STRA (Histone H2B (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5X6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.520e-54
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:   29 KMAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTK 367
            KMAKTPSKKSA  PKKA   KR  KR ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTK
Sbjct:    5 KMAKTPSKKSA-VPKKASTGKRNKKRVESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTK 116
The following BLAST results are available for this feature:
BLAST of Ec-00_005460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI7.650e-69100.00Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A6U0X3U9_9STRA1.610e-6184.55Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
A0A836CJ22_9STRA1.950e-5988.89Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A836CJT3_9STRA6.690e-5882.31Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
H2B_OLILU7.880e-5885.34Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
A0A485K2U0_9STRA9.260e-5885.59Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
B7FWR8_PHATC4.780e-5784.48Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U6DWX5_9STRA2.250e-5686.21Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ... [more]
B8BX20_THAPS2.830e-5483.33Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S2U5X6_9STRA3.520e-5485.84Histone H2B (Fragment) n=1 Tax=Attheya septentrion... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:8681046..8683534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.9
Seed ortholog evalue6.1e-55
Seed eggNOG ortholog2880.D7FWI8
Length914
KEGG koko:K11252
KEGG Pathwayko05034,ko05203,ko05322,map05034,map05203,map05322
Hectar predicted targeting categoryother localisation
Gene idEc-00_005460.1
GOsGO:0000228,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006325,GO:0006333,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0031298,GO:0031974,GO:0031981,GO:0032991,GO:0032993,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0051276,GO:0070013,GO:0071840,GO:0097159,GO:1901363
EggNOG free text desc.protein heterodimerization activity
EggNOG OGsKOG1744@1,KOG1744@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005460Ec-00_005460Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 8681046..8683534 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005460.1.2Ec-00_005460.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8681046..8681564 -
Ec-00_005460.1.1Ec-00_005460.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8683140..8683534 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0054603UTR:Ec-00_005460.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 8681046..8681564 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005460.1CDS:Ec-00_005460.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 8683152..8683502 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0054605UTR:Ec-00_005460.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 8683503..8683534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005460.1Ec-00_005460.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 8683152..8683502 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005460.1 ID=Ec-00_005460.1|Name=Ec-00_005460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=117bp
MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*
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spliced messenger RNA

>Ec-00_005460.1 ID=Ec-00_005460.1|Name=Ec-00_005460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=914bp|location=Sequence derived from alignment at chr_00:8681046..8683534- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACCCTTCTCACCCAACACCACTCAGCATAAAGATGGCCAAGACCCCCTCC
AAGAAGTCCGCCAAGGCGCCCAAGAAGGCCGGCGACAAGAAGAGGACCAA
CAAGAGGACCGAGTCGTACTCGTCGTACATCTACAAGGTGCTTAAGCAGG
TCCACCCCGACACAGGTATCTCCAAGCGCGGCATGTCCATCATGAACTCG
TTCATCAACGACGTGTTCGAGCGCGTGGCCGGCGAGTCCGGCAAGCTCAC
CCGCTACAACAAGAAGGCGACCCTATCATCCCGCGAGGTCCAGACCGCCG
TGCGCCTCATGCTTCCCGGAGAGCTCGCCAAGCACGCCGTTTCCGAGGGC
ACCAAGGCCGTCACCAAGTTCACCTCGTCCTAATCAGCAAGCGAGGCCGC
CGTGAGGTTTGCACACGAGTACATGGCGTTTAAGGTGGGGTGCAGGTACG
GCAGCGCCGCCGGAGGCGGCACGGCTGCCTCCAACCCCAGCAGCAGCAGC
ATGCCTCCGAGCGAGAGAGCCGCCATCACTCCAAGGCGTGTGCGAGTCAA
GCACCTGTGCAGCAAGTACGTCAGTCAGTTTGTTGAAGTACTTGGTGATA
TAGTGCGAGGTGGCGAAAGAGGAGGGAGAAGAGAGAGAGATCGAACCGGC
CTGCCATCGTACGCACATCTTACTCAGGGTCACCACAGACAACAATATTT
TGTAAATAATAAAGCGGTGGGCAGCAAGTGTATCTGATACCTAACCCAGG
CAGGGTGGTGAGGCACCCACCGGACGGTTTCTGCATGCATTTAGCTTGGC
GCGTCACTAAAAATATTATTCGTGATGTAGCGTTGCGTACATAGCTCTTG
ACGGTTTCGGTTTCTGGAGGCGTCGCTGTGGAAGTCACGTACCCCCAGGT
ACAACAGTACCCCG
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protein sequence of Ec-00_005460.1

>Ec-00_005460.1 ID=Ec-00_005460.1|Name=Ec-00_005460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=117bp
MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*
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mRNA from alignment at chr_00:8681046..8683534-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005460.1 ID=Ec-00_005460.1|Name=Ec-00_005460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2489bp|location=Sequence derived from alignment at chr_00:8681046..8683534- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACCCTTCTCACCCAACACCACTCAGCATAAAGATGGCCAAGACCCCCTCC
AAGAAGTCCGCCAAGGCGCCCAAGAAGGCCGGCGACAAGAAGAGGACCAA
CAAGAGGACCGAGTCGTACTCGTCGTACATCTACAAGGTGCTTAAGCAGG
TCCACCCCGACACAGGTATCTCCAAGCGCGGCATGTCCATCATGAACTCG
TTCATCAACGACGTGTTCGAGCGCGTGGCCGGCGAGTCCGGCAAGCTCAC
CCGCTACAACAAGAAGGCGACCCTATCATCCCGCGAGGTCCAGACCGCCG
TGCGCCTCATGCTTCCCGGAGAGCTCGCCAAGCACGCCGTTTCCGAGGGC
ACCAAGGCCGTCACCAAGTTCACCTCGTCCTAATCAGCAAGCGAGGTGCG
CTCTGTTCTTCAGGGGCCACGTCTGTCGGTAGGGTGCCTCGCTTCGGCTC
CTACAACCAGCAAAATCAACCTGGTGTTTACTTAACACCACCCAAACCAC
TGAAGAAAAAGCCCCAGCCAGTTCGGAGTCGCTACCCAGTTGTGTACTGC
CGTAAAATTGGAAAATTGCTTGTACGTTTCGTTTGCATCACGCAATCGAC
TGCTCTTATCTCTCTGGCGGAGTGATTTCTATGCACTCTGAACGTATGTA
AGGAGCATCTTTCGTTCCATTCCATCCATTTGAGTGCCAGTCTCCCTGTC
CTCACGGCTGTATGTTGGACGCACCGGCCAGGGCCTTTGAGGATATCTGT
ATCCTGTATCCTGCGGGTCCAAGTTGTACAGTTCGGACTCTAGGTATTCA
ATACTGCTATGTCCACTGCTGTACATGATGCATCCATGTACAGAGTCGAA
AATTGTTTTTGGCCGTAATGTCTTTCATGGCCTGTAACATGCGTCGGTAC
CGTCATGGTGTCTGCGAAATGCACCATCTAGTTCCGGGTACAACTGCATT
TTTTTAATTATACCCAGCGTCAAGAATAGTGTCAACACGCCTGATGCTCT
ACGCAGATACACGCACCGAGGCTTTTTGGCCTAACTTAAGCTATCGCATG
CGCTGTACATCGGAAAAGGTTGAACGATAAAATAACAAAACACCTTTTTA
CACCGTCCGTGTCCCCCACAGCAGCACACATACATGGTGGATCACGCCTA
GCATACATGCACTTTTTGATGGCCAGGGACGGGTTGGCGGGGCGCCTATC
TCCGGTTTAGCTCGCTGACGGGATGGGTGACCCGGACCGTTTCGTGATTT
GCGGAAGACGAACCTCACTCCCAAGACTTCAGACTTCAACACATCAGTCA
TATTATTTTTTCTTTGTGCGGTCTGTGGGTGAGTACCTCTCCTCGCTTCG
CCCGTAGCGTATGTTATTCTATGTAGACGTCGTTCAAGTTCCGAAATATC
CTCGACAGGACCGAGAAGAGTCTAATTCTATGTGCGACAGGCACACCCGG
GACGTAACTTCCGTCTACACGTCTACACCAAATGCCCAACTACAAGAAAG
GTAGTGCAGACAAAGCGCTCGGTACGTTTCCCCGTTTCCCCCCTTTGAGT
GTCCTATAACCCTCTTACTTCCATGAAAAAAAATCCTAGATGCTATGCAT
GTCTATTTACACACCACCATATCGTACTGCGCAAGGTTTCGGAGCTCTTC
TAGCAGTCTAAACGAAACAAAGTCGCACAACTCCGCAAGCAGCAGGATGC
GTGTTGGAAAGGGTCCCACGTCTCGCGCATCGATGTAAGCGTGCCCACGT
GCTTACTGCCGTGCCAAGTGTCGATTGCCCGGAGCGAGCCACAAGAATCG
AAGAGATCTCAGAACACCGAGCACCAGCGTGTCCGTCGTTTGCATCATGT
TGCTATCGATCCTTCTTTGTGCCCGTTTCGTGCGACATAAGTCGGTCTTG
CCGTTCGCCCACCCCGCTCCCGCCGCCACGCGTCCCCTCTCGCCACTGCC
ACCACACGCCGATCCCGTAGGCCGCCGTGAGGTTTGCACACGAGTACATG
GCGTTTAAGGTGGGGTGCAGGTACGGCAGCGCCGCCGGAGGCGGCACGGC
TGCCTCCAACCCCAGCAGCAGCAGCATGCCTCCGAGCGAGAGAGCCGCCA
TCACTCCAAGGCGTGTGCGAGTCAAGCACCTGTGCAGCAAGTACGTCAGT
CAGTTTGTTGAAGTACTTGGTGATATAGTGCGAGGTGGCGAAAGAGGAGG
GAGAAGAGAGAGAGATCGAACCGGCCTGCCATCGTACGCACATCTTACTC
AGGGTCACCACAGACAACAATATTTTGTAAATAATAAAGCGGTGGGCAGC
AAGTGTATCTGATACCTAACCCAGGCAGGGTGGTGAGGCACCCACCGGAC
GGTTTCTGCATGCATTTAGCTTGGCGCGTCACTAAAAATATTATTCGTGA
TGTAGCGTTGCGTACATAGCTCTTGACGGTTTCGGTTTCTGGAGGCGTCG
CTGTGGAAGTCACGTACCCCCAGGTACAACAGTACCCCG
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Coding sequence (CDS) from alignment at chr_00:8681046..8683534-

>Ec-00_005460.1 ID=Ec-00_005460.1|Name=Ec-00_005460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=351bp|location=Sequence derived from alignment at chr_00:8681046..8683534- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCCAAGACCCCCTCCAAGAAGTCCGCCAAGGCGCCCAAGAAGGCCGG
CGACAAGAAGAGGACCAACAAGAGGACCGAGTCGTACTCGTCGTACATCT
ACAAGGTGCTTAAGCAGGTCCACCCCGACACAGGTATCTCCAAGCGCGGC
ATGTCCATCATGAACTCGTTCATCAACGACGTGTTCGAGCGCGTGGCCGG
CGAGTCCGGCAAGCTCACCCGCTACAACAAGAAGGCGACCCTATCATCCC
GCGAGGTCCAGACCGCCGTGCGCCTCATGCTTCCCGGAGAGCTCGCCAAG
CACGCCGTTTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCGTCCTA
A
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Synonyms
The feature 'Ec-00_005460.1' has the following synonyms
Synonym
Esi0442_0016
Esi_0442_0016