Ec-00_005450.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005450.3
Unique NameEc-00_005450.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length208
Homology
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 3.820e-119
Identity = 320/844 (37.91%), Postives = 321/844 (38.03%), Query Frame = 3 
Query:  300 QFDLEYWGLDYPPLTAYVSWACGQLSRVVEPASMALGLSRGYETQSHKPSCG*RSCCWISPSSSPPQQHSRAGACHVRFPYVLPQQLYSQP*RSLYINRGCRVYKP*PSL*EGRTGEAGSLAEMHCYCSMVVLRLRYSWCPVVAERDTLCGVEIAARRMTPKHRVRAAALYRSCLPCWCTNDARPRMK*RITHWSCHQEGPKPVKMKYGGGSDKGLAQHMSTAKD*TALALSLCITAGTLLDGIFLTLDANNDASPSTSPGPPPTLPLLIRPL*TVDTPHLNRCAEV*LMYLLRLQR*FDCLRTPCFPRLAIDRTVRRGRGVPLLEHWDHPAATRALCMVLLSPSLVLVDHGHFQYNCVCXXXXXXXXXXVASGKRGGGDWLVLPWD*HDMHWYYRI*VDETRHRIDCRDAFLFVVE*HLRVLLYNYGMLRPRLRHLRNRGPQVFSAYDFRLLILGETWKLVETRCVPRVWVCSRWSR*TGLLSFRCR*NPLTLLLLP*FFVALPFCVAELVGSALFSLSLNFKQMALYYAPAFFFYLLASCVWSNPAGTKAIGESVDPSARRCVHVSIFGYLVQRGCFVCMEVKGSP*KHECLRSRHGLCILRRHPGLRVNATTMPRLPRLFSMYMYWYTIQQSQAVSCLRQQLVLCKADRHSSPSYPPAKHRTHATTASTMPS*KSKHQMCWTNQTALPPTGSHADGTATSLNRLSGVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            +FDLEYWGLDYPPLTAYVSWACGQLSRVVEPASMALGLSRGYETQSHK                                                                                                          A  RMT                                                                    L L L I                                                               F         RLAIDRTVRRGRGVPLLEHWDHPAATRALCMVLLSPSLVLVDHGHFQYNCV XXXXXXXXXXVASGKRGG                                                                                                                                   ELVGSALFSLSLNFKQMALYYAPAFFFYLLASCVWSNPAGTKAIG                                                                                                                                            SHADGTATSLNRLSGVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV
Sbjct:   69 RFDLEYWGLDYPPLTAYVSWACGQLSRVVEPASMALGLSRGYETQSHK----------------------------------------------------------------------------------------------------------AFMRMT-------------------------------------------------------------------VLLLDLAI---------------------------------------------------------------FFPAAAALTSRLAIDRTVRRGRGVPLLEHWDHPAATRALCMVLLSPSLVLVDHGHFQYNCVXXXXXXXXXXXVASGKRGG-----------------------------------------------------------------------------------------------------------------------------------ELVGSALFSLSLNFKQMALYYAPAFFFYLLASCVWSNPAGTKAIG--------------------------------------------------------------------------------------------------------------------------------------------SHADGTATSLNRLSGVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 405
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A1V9YSV9_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSV9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.080e-21
Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = 3 
Query: 2421 SGVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQ-LAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            S  + R + L   VI+TF +LWAPFCL           + S CL  + QV  R+FP  RGLFEDKVAN W CLD+  KLR+R+   Q L  L    TL   +P   +LLR  R PT  R  LALFNSS++FFL S+QV
Sbjct:    1 SNFILRFVKLAVAVILTFSLLWAPFCLY----------SSSTCLDGLLQVLHRIFPVGRGLFEDKVANFWCCLDLFIKLRQRISSQQHLVYLCTGMTLLGFLPSIIDLLR--RQPTRTRFFLALFNSSLSFFLFSYQV 126
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A7S3H9F0_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9F0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.230e-20
Identity = 64/128 (50.00%), Postives = 76/128 (59.38%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            LG  VI TF +LWAPFC+    +          CL+++GQV  R FPFSRG+FEDKVANLW+ L V    R  L   QL   +L  TL LL+P  A LL   R  T   L+ AL NSS+AFFL SFQV
Sbjct:  236 LGITVISTFGLLWAPFCVFHSPEDT--------CLTSLGQVLHRQFPFSRGIFEDKVANLWYTLSVAVDFREHLTAQQLLASSLTLTLFLLLPTCAYLLT--RRATFTALLFALMNSSLAFFLASFQV 353
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A1V9Z1G8_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1G8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.110e-20
Identity = 66/137 (48.18%), Postives = 81/137 (59.12%), Query Frame = 3 
Query: 2424 GVLRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQ-LAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            G + R L L   VI TF +LWAPFC+  D    DG          + QV  R+FP  RGLFEDKVAN+W CLD+ FKLR+R+   Q L  +   +TL   +P   +LLR  R PT  R  LALFN SM+FFL S+QV
Sbjct:  227 GFIARFLKLAVAVIGTFALLWAPFCIYHDGPCADG----------LLQVLHRIFPVGRGLFEDKVANVWCCLDLFFKLRQRVTSQQHLVYICATATLVGFLPSVIDLLR--RPPTRTRFFLALFNCSMSFFLFSYQV 351
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A482S0G5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0G5_9ARCH)

HSP 1 Score: 106 bits (264), Expect = 8.320e-20
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            +G  V+ TF VLW PFCL           A+  CLS++G V  R FPFSRG+FEDKVAN+W+ L VV   R  + +PQL  L+L  TL+LL PV   L+    S +   ++L L NSS+AFFL SFQV
Sbjct:  236 IGLTVLATFAVLWVPFCLWPS--------AEETCLSSLGHVLSRQFPFSRGIFEDKVANIWYALSVVVDYRHFIALPQLVSLSLVLTLTLLGPVCYLLISYPLSLS--HILLGLVNSSLAFFLASFQV 353
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A5D6Y746_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y746_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.300e-19
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 3 
Query: 2430 LRRVLGLGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            L  +L LG  V+ TF +LW PFCL R  + E        C++++ QV  R+FPF+RGLFEDKVAN W  LD+V+K++R +   Q  +L   +TL   +P   +LLR  R PT  R +LAL NSS++FFL SFQV
Sbjct:  249 LLHLLKLGVAVVGTFALLWLPFCL-RPFEGET-------CVTSVLQVLHRIFPFARGLFEDKVANFWCVLDLVYKIKRHVTPTQQMRLCTLATLLGFLPSTVDLLR--RQPTRLRFLLALANSSLSFFLFSFQV 372
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A067CH63_SAPPC (Alpha-1,3-glucosyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH63_SAPPC)

HSP 1 Score: 102 bits (254), Expect = 1.340e-18
Identity = 58/129 (44.96%), Postives = 80/129 (62.02%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQ-LAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            L + V++TF +LWAPFC++          + + C+  + QV  R+FP  RGLFEDKVAN+W CLD+  KLR+R+   + L  L   +TL   +P   +LLR  R P+  R  L+LFN SMAFFL S+QV
Sbjct:  235 LATAVVLTFSLLWAPFCVV----------SATTCVDGLAQVLHRIFPIGRGLFEDKVANVWCCLDLFLKLRQRVASQEHLVYLCTLATLLAFLPSIVDLLR--RPPSRTRFFLSLFNCSMAFFLFSYQV 351
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A024FUC1_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FUC1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.150e-18
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            L + V++T  +LW PFCL R   S         CLS+  Q+  R+FP +RGLFEDKV+N+W  LD+V+K+R  + + +   L   +T   L P   +LLR  R PT  R VL+L NSS++FFL SFQV
Sbjct:  258 LSAAVVVTIGLLWLPFCLYRPPGST--------CLSSWQQIVHRIFPVARGLFEDKVSNVWCVLDLVYKVRHHIAMSEQLLLCTITTFLALTPSMLDLLR--RKPTKTRFVLSLVNSSLSFFLFSFQV 375
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: W4FD49_9STRA (Alpha-1,3-glucosyltransferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FD49_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.030e-18
Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            LG  VI +F VLW P C          S   + C   + Q+  R+FP +RGLFEDKVAN+W CLD+  KLR  +  P L  L   +TL   +P   +L+R  R P+  R  LALFNSSM+FFL SFQV
Sbjct:  235 LGVTVIASFAVLWLPLC---------ASTGHATCGPTLAQMLHRVFPIARGLFEDKVANVWCCLDLFLKLRHHISPPHLVYLCTGATLVGFLPSVVDLVR--RPPSRVRFFLALFNSSMSFFLFSFQV 351
[Close]
BLAST of Ec-00_005450.3 vs. uniprot
Match: A0A8K1CIN0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIN0_PYTOL)

HSP 1 Score: 100 bits (250), Expect = 5.050e-18
Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 3 
Query: 2448 LGSVVIITFMVLWAPFCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLDVVFKLRRRL-PVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALFNSSMAFFLCSFQV 2831
            L   VI TF V+W PFCL   +           C S++GQV  R+FPF+RGLFEDKVAN+W  LD+V KL+R + PV Q+ +L   +T    +P   +L+R  R P+  R +LAL NSS+AFFL SFQV
Sbjct:  260 LAVAVIATFAVMWLPFCLYAREGET--------CASSVGQVLHRVFPFARGLFEDKVANVWCVLDLVLKLKRHVSPVLQM-RLCTITTFVGFLPSVVDLVR--RKPSKFRFLLALVNSSLAFFLFSFQV 377
The following BLAST results are available for this feature:
BLAST of Ec-00_005450.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G191_ECTSI3.820e-11937.91Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A1V9YSV9_9STRA2.080e-2147.83Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=T... [more]
A0A7S3H9F0_9STRA3.230e-2050.00Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=S... [more]
A0A1V9Z1G8_9STRA4.110e-2048.18Alpha-1,3-glucosyltransferase n=1 Tax=Achlya hypog... [more]
A0A482S0G5_9ARCH8.320e-2048.44Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A5D6Y746_9STRA2.300e-1947.01Alpha-1,3-glucosyltransferase n=1 Tax=Pythium bras... [more]
A0A067CH63_SAPPC1.340e-1844.96Alpha-1,3-glucosyltransferase n=2 Tax=Saprolegnia ... [more]
A0A024FUC1_9STRA2.150e-1844.53Alpha-1,3-glucosyltransferase n=1 Tax=Albugo candi... [more]
W4FD49_9STRA3.030e-1846.09Alpha-1,3-glucosyltransferase n=2 Tax=Aphanomyces ... [more]
A0A8K1CIN0_PYTOL5.050e-1848.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:8670610..8682840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score301.6
Seed ortholog evalue2.8e-79
Seed eggNOG ortholog2880.D7G191
Preferred nameALG6
Length5008
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categorysignal anchor
Gene idEc-00_005450.3
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2575@1,KOG2575@2759
EC2.4.1.267
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005450Ec-00_005450Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 8670610..8682840 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005450.3Ec-00_005450.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 8674834..8678325 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005450.3.1Ec-00_005450.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8670610..8670912 +
Ec-00_005450.3.2Ec-00_005450.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8671683..8671824 +
Ec-00_005450.3.3Ec-00_005450.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8672934..8675058 +
Ec-00_005450.3.4Ec-00_005450.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8675835..8675980 +
Ec-00_005450.3.5Ec-00_005450.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8677135..8677254 +
Ec-00_005450.3.6Ec-00_005450.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8678193..8678867 +
Ec-00_005450.3.7Ec-00_005450.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8680655..8680716 +
Ec-00_005450.3.8Ec-00_005450.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 8681406..8682840 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0054505UTR:Ec-00_005450.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 8670610..8670912 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005450.3CDS:Ec-00_005450.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 8674834..8675058 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0054503UTR:Ec-00_005450.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 8678326..8678867 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005450.3 ID=Ec-00_005450.3|Name=Ec-00_005450.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=208bp
MCWTNQTALPPTGSHADGTATSLNRLSGVLRRVLGLGSVVIITFMVLWAP
FCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLD
VVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALF
NSSMAFFLCSFQVRCTKKACCCHSAHWRFSGETRPCSRRGYRYIQSGVWM
SAVIFKT*
back to top

spliced messenger RNA

>Ec-00_005450.3 ID=Ec-00_005450.3|Name=Ec-00_005450.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5008bp|location=Sequence derived from alignment at chr_00:8670610..8682840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCGTACATTTTAGAACACCCTTTGAGCGCATCGTGTGTTGCGTTGTTCCA
TTTGGTTGAGTGCTGTATCCTTGCCTTGCGAAGACAGACGAGTTGACATG
GACGGACCCGCTACCGATTTACCATCCCTGACAAAGTGGCAGCCAGGCCC
TTTGGTTGTAGTGTGGTTTGCTCTGCTGCTGCGATGCATGGTCTCGCTGT
GGCCGTACTCTGGGCAAGGAGAGCGGCCCATGTACGGTGACTACGAAGCA
CAGAGACACTGGATGGAGATCACCAACGCCCTGCCGCTTCATCAATGGTA
CAGATTCGATCTGGAGTATTGGGGGCTGGACTATCCTCCTCTGACAGCCT
ATGTCTCGTGGGCCTGTGGTCAGCTGTCGAGGGTTGTGGAGCCCGCATCT
ATGGCCCTCGGTCTATCTCGTGGCTACGAGACTCAGAGCCACAAGGCCTT
CATGCGGATGACGGTCTTGTTGTTGGATCTCGCCATCTTCTTCCCCGCCG
CAGCAGCACTCACGAGCAGGTGCCTGTCACGTTCGTTTTCCTTATGTACT
GCCACAGCAGTTGTACAGTCAGCCGTGACGAAGCCTGTACATCAATAGAG
GTTGTCGGGTGTACAAGCCTTAGCCTTCTCTGTAGGAGGGGAGGACGGGA
GAGGCAGGCAGCCTTGCTGAAATGCATTGCTATTGTAGCATGGTGGTGTT
GCGTCTCCGTTACTCTTGGTGCCCTGTTGTTGCCGAGCGAGACACCTTGT
GTGGCGTGGAAATTGCTGCACGTCGCATGACGCCCAAACACCGGGTACGC
GCTGCTGCGCTCTATCGTTCATGCTTGCCATGCTGGTGCACGAACGATGC
ACGTCCAAGAATGAAATGACGAATTACGCACTGGAGTTGTCATCAAGAAG
GTCCCAAACCCGTGAAGATGAAGTACGGCGGTGGCTCAGACAAGGGACTG
GCTCAACACATGAGCACGGCCAAAGACTAAACTGCGCTTGCTCTCTCTCT
CTGCATCACAGCCGGAACACTGTTGGATGGGATTTTTCTTACTCTTGACG
CGAACAACGATGCGTCCCCGTCAACATCGCCTGGGCCACCGCCTACATTG
CCTCTGCTGATCCGTCCACTGTAGACTGTAGACACTCCACACCTTAATCG
CTGTGCAGAGGTGTGACTGATGTACCTACTTCGTCTGCAGCGTTGATTTG
ATTGCTTGCGCACGCCATGCTTCCCCAGGTTAGCTATTGACAGGACGGTG
CGGAGGGGAAGAGGGGTGCCCCTCCTAGAGCATTGGGATCATCCTGCGGC
GACGAGGGCTCTGTGCATGGTGCTCCTTTCGCCGTCCCTGGTGCTCGTCG
ATCACGGACACTTCCAGTACAACTGCGTGTGCCTCGGGCTGGCCGTGGCG
GCCGCTGCTGCGGTGGCTAGCGGAAAACGTGGCGGAGGTGACTGGTTGGT
ATTACCATGGGATTAACATGATATGCATTGGTACTATCGTATATAGGTGG
ACGAGACAAGACACAGGATTGATTGTCGGGATGCTTTCTTGTTCGTCGTA
GAATAGCATCTCAGAGTTTTGCTGTACAACTATGGTATGCTACGACCACG
TCTACGACATCTACGAAATCGGGGTCCACAGGTTTTCTCTGCATATGACT
TCCGGCTGTTGATTCTCGGAGAGACATGGAAGCTCGTTGAGACGCGATGC
GTTCCGCGCGTGTGGGTATGTAGTAGATGGTCTAGATAGACAGGGCTCCT
TTCTTTTCGTTGCCGCTGAAACCCTCTCACCCTCTTGCTGCTGCCATGAT
TTTTCGTGGCCTTGCCGTTTTGTGTGGCAGAACTTGTCGGCAGCGCTCTC
TTCTCCTTGTCTCTCAACTTCAAGCAGATGGCTCTGTACTATGCTCCAGC
TTTCTTCTTCTACCTGCTGGCCTCTTGTGTGTGGAGTAACCCGGCGGGCA
CGAAGGCGATTGGTGAGTCAGTCGATCCTTCGGCACGTCGATGTGTACAT
GTTTCAATTTTTGGCTATTTAGTACAGCGTGGGTGTTTTGTGTGCATGGA
GGTAAAAGGCTCACCTTAAAAACACGAGTGTCTAAGGTCGCGACATGGGC
TTTGTATTTTGAGAAGGCATCCAGGGTTGAGAGTAAACGCCACTACAATG
CCAAGATTGCCAAGATTGTTTTCTATGTACATGTACTGGTATACCATACA
GCAATCACAGGCAGTTAGTTGCCTACGGCAGCAGTTAGTTTTATGCAAGG
CCGACCGGCACTCATCTCCTTCCTACCCCCCAGCCAAGCACCGCACACAC
GCCACGACCGCTTCTACCATGCCGTCTTGAAAATCGAAACATCAGATGTG
TTGGACCAACCAAACGGCGTTGCCCCCTACAGGAAGCCATGCGGATGGCA
CAGCGACGTCGTTGAACCGTTTGTCGGGGGTGTTGCGGCGGGTGCTCGGC
CTCGGGTCTGTGGTGATTATCACTTTCATGGTCTTGTGGGCACCGTTCTG
CCTTTTGCGGGACGATGATTCTGAGGATGGTTCCGACGCGCAAAGCGGAT
GCCTGTCTGCGATGGGCCAGGTGTCAGTGAGGTTGTTCCCCTTCTCTCGG
GGACTGTTCGAGGACAAGGTCGCCAACCTCTGGTTCTGCCTCGACGTCGT
ATTCAAGCTGAGGAGGAGGCTGCCGGTGCCGCAACTCGCGAAGCTGGCTC
TCGCGTCGACGCTGAGCCTCTTGGTGCCGGTGGGAGCGGAGCTGTTGAGG
CCGGGCCGATCGCCGACGGCAAGGAGGCTGGTGCTGGCCCTCTTCAACAG
CTCCATGGCCTTCTTCTTGTGTTCTTTTCAGGTGAGGTGCACGAAAAAAG
CCTGCTGCTGCCACTCTGCCCACTGGCGTTTCTCTGGAGAGACGCGCCCC
TGTTCACGACGTGGCTACAGGTACATCCAAAGCGGTGTCTGGATGTCTGC
AGTAATCTTTAAAACATAGTCACCGTTCGTTTAGTGTGTGGGTGGACCAA
CATGCTGCTGTGACGATTTTGCCGCCCCCGCAATGCGCAATCCACCAAGA
AGGAAATTGTCACGGAACTCGCTACAAATACACAGCTGGATTTTGTGTTC
CTGCGTGGACACCCCGGTTCTTTTGAGGGGGCAAGTGATTTTACTGGACG
CGGTGTTTTGGTTATTACAATATTACAATAGCCTTGTGACTACGGAAGAC
ATGTGCGTAAGTTGGACCATTGCTAGTGAGTGTATTTGGGAGGTACTTAC
AATAGCAGAGATTGGCGCTGTTTTTTATGTGAATACAATAATAACAATAT
TGTAACAATAGCATCAGCAGTATGAACATGGCGTCATCTCTTGTTGGCCT
CGTCACCCTGTCGTAACCAATCCCTGCTCGTGCTCCTGTGCTGCTGTCAC
ATCTATCGTGACCAGGTTATCGGCGTTTTCAGCATGAAGCCGTTGCTCGC
TCGGGAAGGGCTGCTCGTGCCTTGTGTGGTGTGCACCTTGCTCTACGTCG
CCGCCTCGGTGTTTCTGGCACTACCGGAGGGCGACGTGGGCGAGCCAGCC
GCTTCTTCTTTTCCATACGGGAGGTGCTTGACTCGCACACGCCTTGGAGT
GATGGCGGCTCTCTCGCTCGGAGGCATGCTGCTGCTGCTGGGGTTGGAGG
CAGCCGTGCCGCCTCCGGCGGCGCTGCCGTACCTGCACCCCACCTTAAAC
GCCATGTACTCGTGTGCAAACCTCACGGCGGCCTACGGGATCGGCGTGTG
GTGGCAGTGGCGAGAGGGGACGCGTGGCGGCGGGAGCGGGGTGGGCGAAC
GGCAAGACCGACTTATGTCGCACGAAACGGGCACAAAGAAGGATCGATAG
CAACATGATGCAAACGACGGACACGCTGGTGCTCGGTGTTCTGAGATCTC
TTCGATTCTTGTGGCTCGCTCCGGGCAATCGACACTTGGCACGGCAGTAA
GCACGTGGGCACGCTTACATCGATGCGCGAGACGTGGGACCCTTTCCAAC
ACGCATCCTGCTGCTTGCGGAGTTGTGCGACTTTGTTTCGTTTAGACTGC
TAGAAGAGCTCCGAAACCTTGCGCAGTACGATATGGTGGTGTGTAAATAG
ACATGCATAGCATCTAGGATTTTTTTTCATGGAAGTAAGAGGGTTATAGG
ACACTCAAAGGGGGGAAACGGGGAAACGTACCGAGCGCTTTGTCTGCACT
ACCTTTCTTGTAGTTGGGCATTTGGTGTAGACGTGTAGACGGAAGTTACG
TCCCGGGTGTGCCTGTCGCACATAGAATTAGACTCTTCTCGGTCCTGTCG
AGGATATTTCGGAACTTGAACGACGTCTACATAGAATAACATACGCTACG
GGCGAAGCGAGGAGAGGTACTCACCCACAGACCGCACAAAGAAAAAATAA
TATGACTGATGTGTTGAAGTCTGAAGTCTTGGGAGTGAGGTTCGTCTTCC
GCAAATCACGAAACGGTCCGGGTCACCCATCCCGTCAGCGAGCTAAACCG
GAGATAGGCGCCCCGCCAACCCGTCCCTGGCCATCAAAAAGTGCATGTAT
GCTAGGCGTGATCCACCATGTATGTGTGCTGCTGTGGGGGACACGGACGG
TGTAAAAAGGTGTTTTGTTATTTTATCGTTCAACCTTTTCCGATGTACAG
CGCATGCGATAGCTTAAGTTAGGCCAAAAAGCCTCGGTGCGTGTATCTGC
GTAGAGCATCAGGCGTGTTGACACTATTCTTGACGCTGGGTATAATTAAA
AAAATGCAGTTGTACCCGGAACTAGATGGTGCATTTCGCAGACACCATGA
CGGTACCGACGCATGTTACAGGCCATGAAAGACATTACGGCCAAAAACAA
TTTTCGACTCTGTACATGGATGCATCATGTACAGCAGTGGACATAGCAGT
ATTGAATACCTAGAGTCCGAACTGTACAACTTGGACCCGCAGGATACAGG
ATACAGATATCCTCAAAGGCCCTGGCCGGTGCGTCCAACATACAGCCGTG
AGGACAGG
back to top

protein sequence of Ec-00_005450.3

>Ec-00_005450.3 ID=Ec-00_005450.3|Name=Ec-00_005450.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=208bp
MCWTNQTALPPTGSHADGTATSLNRLSGVLRRVLGLGSVVIITFMVLWAP
FCLLRDDDSEDGSDAQSGCLSAMGQVSVRLFPFSRGLFEDKVANLWFCLD
VVFKLRRRLPVPQLAKLALASTLSLLVPVGAELLRPGRSPTARRLVLALF
NSSMAFFLCSFQVRCTKKACCCHSAHWRFSGETRPCSRRGYRYIQSGVWM
SAVIFKT*
back to top

mRNA from alignment at chr_00:8670610..8682840+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005450.3 ID=Ec-00_005450.3|Name=Ec-00_005450.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12231bp|location=Sequence derived from alignment at chr_00:8670610..8682840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCGTACATTTTAGAACACCCTTTGAGCGCATCGTGTGTTGCGTTGTTCCA
TTTGGTTGAGTGCTGTATCCTTGCCTTGCGAAGACAGACGAGTTGACATG
GACGGACCCGCTACCGATTTACCATCCCTGACAAAGTGGCAGCCAGGCCC
TTTGGTTGTAGTGTGGTTTGCTCTGCTGCTGCGATGCATGGTCTCGCTGT
GGCCGTACTCTGGGCAAGGAGAGCGGCCCATGTACGGTGACTACGAAGCA
CAGAGACACTGGATGGAGATCACCAACGCCCTGCCGCTTCATCAATGGTA
CAGGTAGGCAAACGTGATTGCACCGGTGAAGGTTTGCCTGATGAGGGGCT
CATGGTATACTCCTTCACTCTCCGGGATGCCCCCATCCAAAGCCGGCTGC
AGCGCGCTGCAGCGTGTGTATTTCCTCCGCGTTTTCGCGTTTTCGAAAAT
TCGGCCACAGCCCGCCATGTTGTGCACCTGCTCACTGCAGCTTGCTGCGC
CGTCTACGTACCCACGATCCCTAAGTCCGCCCAGGGAGGCTTATGATACA
GCGGCGCTCTCGCGGATTAACAGCAGTCCAACGCCCTCTCAAGAGTTGAA
TCCCGCTTACTGTCCGAGATGGAGGTACACAGCACAACCAGATGAGGTGC
AAAGCAACGGGTGCTAGCGGTACGCGTCCACCATAGTCTTACCACACCCC
CTGGACCGATTTTCACAGATCGGTTGCTCCACGACGAAGAGGATGCCGAT
ATCAAATGAGTCGTCTTCGGAAAGCTTTCCACAAGACGGTTCCATCGCCG
CCATTTTCTGCACCGTTATTACTGGTTTACTTTCGGGTAACCGGGCTTCG
AAAATCGGTCCAGGGGGGCGGGGTGATATCTTGTGTCATGTCACCTACTG
TGTACGACAAGCGTAGGAAGACGACGCTGGCTGAGTTTTGGAGGCGATTT
AGGCTGATGGGGTGTATCGGCTTGCTCGCCCAATTCACCTCTCACCCCTT
CCACGCCGTTTTCTTGTTTTCTCCTGTTTTCTCCGATGCGTCACGCTGCT
GTGTGTGGTGTGTACATCTCCAGATTCGATCTGGAGTATTGGGGGCTGGA
CTATCCTCCTCTGACAGCCTATGTCTCGTGGGCCTGTGGTCAGCTGTCGA
GGGTTGTGGAGCCCGCATCTATGGCCCTCGGTCTATCTCGTGGCTACGAG
ACTCAGAGCCACAAGGTAGGGACCAAGAAGGTCACTAATCTACTGTACAT
GCGGTATACTGCTGCCGTACTGCAGTAGGCTGACATCCGGGGTTCGAGTG
TCCCCTCTTGAGCATGTTATCCTCGAGGATTTTATTTGCCCCTGAAATAA
GCGGAACAAAAAGCCTGAAGAACAACAGTAGGCTTTCCGAAATGAGGCGA
TGACCTGCTTTTACCGATCTGGCGAGCACCGCGTTGATCACAGGGATGGC
AACCCTGGGGGGACGTGTTCGTGGCTTGAAAGAAAGCTTGGCGGACTCGG
GCACTAGATTTTGTTGAGAGGCACGATGACCACTAGACCACCAGTTTACG
CTGATTGGTGGTCTCATCGTGATTCTCAGCAACGGACATGCTGGTCTTGA
CTGGTACTGCTGACTGCGGTGTGTACGACAGGGCAGATTTCTGTAGTACC
ATTTGTTATGAAGCACGATGACCACTAGGCACTAGACCACTAGTCAGCGC
TACCTAGTGGTCTCCTGGTCAGCGCTTCTTAATACCACCAATCACTGGAC
ATTCCTACTTCTGTGTTGTGACGTACGACAACCTTGTCGACGGGTGGCGA
CGAAATACTCGAGCCTCGACCCCAATCTGACGATGCTTTGTTGCGGGGCC
GTTCTGTGTGTTTTTTGGAGGCTGGCCAGCAGTTCGTACCGCTAAGAAGT
TTTGTTCCAAAGGCGGCGATTGGTGCCTAGCATCGCCTGGTTTGTTACAC
ACGAGCACACAAGACAAGCAGGTGCACCGCGGATGAGACTTTCCCTGTAC
AACTCTTACAGCAGTAGCACCTACCACGCTCCGCGGAATTCACAGGGTAG
GAGCCACCGATGATACCTCACGTGATTCCGCCCACCCACGTCTTTGGTGT
GGTCATTCTGTAACGTATTGTTTGCTGAATGCGCGGTATTTTTTCTTTTC
TCAGGCCGGAAGCACCACCGCCATGTGGCACCCATCATTTTGGCTTGCCT
GTTTGCGATATGCTTGCTTTGTGGACTTGTGTGTCCGCTGCTGGGCGCAC
TGCTGGGCGTGCTGAACTGCTGTTTTGTCGCGTGCAACCTATTAGTAATC
CTAACCCTACCCCTTGAACGGCAGGCCTTCATGCGGATGACGGTCTTGTT
GTTGGATCTCGCCATCTTCTTCCCCGCCGCAGCAGCACTCACGAGCAGGT
GCCTGTCACGTTCGTTTTCCTTATGTACTGCCACAGCAGTTGTACAGTCA
GCCGTGACGAAGCCTGTACATCAATAGAGGTTGTCGGGTGTACAAGCCTT
AGCCTTCTCTGTAGGAGGGGAGGACGGGAGAGGCAGGCAGCCTTGCTGAA
ATGCATTGCTATTGTAGCATGGTGGTGTTGCGTCTCCGTTACTCTTGGTG
CCCTGTTGTTGCCGAGCGAGACACCTTGTGTGGCGTGGAAATTGCTGCAC
GTCGCATGACGCCCAAACACCGGGTACGCGCTGCTGCGCTCTATCGTTCA
TGCTTGCCATGCTGGTGCACGAACGATGCACGTCCAAGAATGAAATGACG
AATTACGCACTGGAGTTGTCATCAAGAAGGTCCCAAACCCGTGAAGATGA
AGTACGGCGGTGGCTCAGACAAGGGACTGGCTCAACACATGAGCACGGCC
AAAGACTAAACTGCGCTTGCTCTCTCTCTCTGCATCACAGCCGGAACACT
GTTGGATGGGATTTTTCTTACTCTTGACGCGAACAACGATGCGTCCCCGT
CAACATCGCCTGGGCCACCGCCTACATTGCCTCTGCTGATCCGTCCACTG
TAGACTGTAGACACTCCACACCTTAATCGCTGTGCAGAGGTGTGACTGAT
GTACCTACTTCGTCTGCAGCGTTGATTTGATTGCTTGCGCACGCCATGCT
TCCCCAGGTTAGCTATTGACAGGACGGTGCGGAGGGGAAGAGGGGTGCCC
CTCCTAGAGCATTGGGATCATCCTGCGGCGACGAGGGCTCTGTGCATGGT
GCTCCTTTCGCCGTCCCTGGTGCTCGTCGATCACGGACACTTCCAGTACA
ACTGCGTGTGCCTCGGGCTGGCCGTGGCGGCCGCTGCTGCGGTGGCTAGC
GGAAAACGTGGCGGAGGTGACTGGTTGGTATTACCATGGGATTAACATGA
TATGCATTGGTACTATCGTATATAGGTGGACGAGACAAGACACAGGATTG
ATTGTCGGGATGCTTTCTTGTTCGTCGTAGAATAGCATCTCAGAGTTTTG
CTGTACAACTATGGTATGCTACGACCACGTCTACGACATCTACGAAATCG
GGGTCCACAGGTTTTCTCTGCATATGACTTCCGGCTGTTGATTCTCGGAG
AGACATGGAAGCTCGTTGAGACGCGATGCGTTCCGCGCGTGTGGGTATGT
AGTAGATGGTCTAGATAGACAGGGCTCCTTTCTTTTCGTTGCCGCTGAAA
CCCTCTCACCCTCTTGCTGCTGCCATGATTTTTCGTGGCCTTGCCGTTTT
GTGTGGCAGAACTTGTCGGCAGCGCTCTCTTCTCCTTGTCTCTCAACTTC
AAGCAGATGGCTCTGTACTATGCTCCAGCTTTCTTCTTCTACCTGCTGGC
CTCTTGTGTGTGGAGTAACCCGGCGGGCACGAAGGCGATTGGTGAGTCAG
TCGATCCTTCGGCACGTCGATGTGTACATGTTTCAATTTTTGGCTATTTA
GTACAGCGTGGGTGTTTTGTGTGCATGGAGGTAAAAGGCTCACCTTAAAA
ACACGAGTGTCTAAGGTCGCGACATGGGCTTTGTATTTTGAGAAGGCATC
CAGGGTTGAGAGTAAACGCCACTACAATGCCAAGATTGCCAAGATTGTTT
TCTATGTACATGTACTGGTATACCATACAGCAATCACAGGCAGTTAGTTG
CCTACGGCAGCAGTTAGTTTTATGCAAGGCCGACCGGCACTCATCTCCTT
CCTACCCCCCAGCCAAGCACCGCACACACGCCACGACCGCTTCTACCATG
CCGTCTTGAAAATCGAAACATCAGATGTGTTGGACCAACCAAACGGCGTT
GCCCCCTACAGGAAGCCATGCGGATGGCACAGCGACGTCGTTGAACCGTT
TGTCGGGGGTGTTGCGGCGGGTGCTCGGCCTCGGGTCTGTGGTGATTATC
ACTTTCATGGTCTTGTGGGCACCGTTCTGCCTTTTGCGGGACGATGATTC
TGAGGATGGTTCCGACGCGCAAAGCGGATGCCTGTCTGCGATGGGCCAGG
TGAGCTAGCTGGGCCCGCTGCTCCGCTTGTTTGCTGCCTTGTTGCGTCGT
TGCCCTTTGGAACCAGCAGGGTCTGCCGCAGGGGCTGACAAAGTTGGGGA
TTTGTCCCGTGTATGTGTTTAATTGAGCAAGTCTATTCATCCACGGAACC
CCTGTCACACGCGTAGAATGCCACCATGACAACGGCCCCCTTAAGGATTG
GATAATGCCAAGGGGTTTCCGGGCTACACCTCTTTTTGGTAGGGACGTGA
AGACGTGAAGGTGGATGCTTGGGTGGTGTCGGGAAGAATCAGGATCGCCG
GACGACGGTTGGCATTGGGTGGTGGCTAGACCCACAGCTGCAGCTATTTG
ATATCAGTACAGTAGCGAGAATGGCCCCTGTCGACCGCTTTTCTGTGTCC
TTGCTTTGCAAATGGTGTGAGAGGCCACATGACGGATGCCTTGGCATGAA
GATGAAGCTGCAGTCGTGATCAATCCCGGGCCATTGTCGGCCCCCTCCCG
TCTCTGTGAAGGTTCCGATAAGAGCATACTGTATGGTAAGGGGAACGGGG
GGGGATATGCTGCTGTGCCTGATGCATGGATGTTTCGTTGACGCTACTCC
AATCTGCGCCTTTGCCCTCTCGCGATTGACGGATGTCCCGTGGGTTTTCT
CCTGCCGAACGGACGGGATGCCCCAGCACATACCTTGCACGGGCGAGAAC
GGGTCTGTGTTTTTTTCAAAGACAGCACCAACGTTTTCAAAACTTATGAT
ACTACTGGAACGGCAACAAACACAGGTGTCAGTGAGGTTGTTCCCCTTCT
CTCGGGGACTGTTCGAGGACAAGGTCGCCAACCTCTGGTTCTGCCTCGAC
GTCGTATTCAAGCTGAGGAGGAGGCTGCCGGTGCCGCAACTCGCGAAGCT
GGCTCTCGCGTCGACGCTGAGGTGGGTTGGTTGGTTGCGATGTGCCGCGT
ATGAAGATGCAGGGATGAGGTTATGAATATTGAATGGGACAGCGTAGCCG
ATGAGCCACCACATGTTGCGGTGCCGGGGAAAGAATGCTATGTATGGTGA
CAGGGACATATTCTGGCTATTATTTGGGTGGTTCGAGGGTGAAGCGAAGA
GAGGAGGGCGCAGGCGAGATACCTCGTGGTTGCGATCTCCCTAGCCTAAG
GCGGCATCATCCATCATCCATGATGCACACTTTGGCACACAATAATGTAC
AGGAAGGTGTTCTCCACCGACGTACCCGCTAGAGTACCGCAGTGCAGAAC
GGTACAGCATGTACCAGCAGTGCAGCAGGTACAGCAGAGCAGTCCACGAG
GCGATTCCTTACAGCAGATGTTGGCTGGCATGTTGGAATATTGTCATACT
GATACGATCACCAACACCAACATCAACGTCAACATTTTTTTCCTTCAAAG
ACTGCAGCACAGCACCCAGTCGGACGTTTTACCCCTAGCCGGCGGTACCC
TCAATCATGATACTAGAATAGATTGTTTGTTCGCCCGGTGTCATGGTCGG
AGTAGTTTACGCGGCCAGGCAAGGCTGTTGGTCGGAAAAGCTCCTTGCTT
GTTTTTTTTAGCGTAATGTGTCGCCCTTGTGTGTTCATGAAAATATCTGA
ATTTTGTGTGCATAACGTCGAACGCCTGCCAGTACACCTCAGGCTCGACG
AGAGTAAATGAGCAAGAACCGTTCGTAGCACCGTTCGTAGATGCAGCTTC
CGTCGCTACGGCGTGAACCATCGAATCATCATGACATGTCATGGCATGGG
TGGGTATCGATTTGAGCTAGGAGTGAGTGTTTCGTCTCCCAGTCTTCGAG
GCGTGACTGCTTCTGCTACTGCTGCTACTTCTGCTGCTGCTACTGCCGCT
AGAGTATCGGCATTGTCCGTCTACCTTTCGCACCCCGCGGCAGTGGCATC
AGTGGCACACCTTGTTCGCCCCCCTTTGGGAAGGACAACGTCCTAGGTAT
GCATACGGTACCAGCAACGATGTACGGCGAAATGTGAATTGTGCGTCACC
CCCACTAATACCGTACGTCTCTTTCGTCGTGCTGATTTGTGCGTCACCCC
GACTCTCGTTCGTGTGTCGGTACAGCCTCTTGGTGCCGGTGGGAGCGGAG
CTGTTGAGGCCGGGCCGATCGCCGACGGCAAGGAGGCTGGTGCTGGCCCT
CTTCAACAGCTCCATGGCCTTCTTCTTGTGTTCTTTTCAGGTGAGGTGAG
GAGGCGAACAAGCGAGCGAGGTTCCAGCCACTGCTGTGCCGTGCTATCCC
TAGACCTCTGTAGTCAATATTGGCCTAGCTGGCTGGCCAATACCTGATAC
CCTTTCTTTTCCGGCTTGGTGTGGTGCAAGAATCTATGGTTTGTTGAGCG
CGGCAAGCGAAGGCCTTGCATGGAGAGTAGCAACTGGGTTTGAAGCTTGA
CGTAAGGAAAAGGCAGCCGATACATTGTCGACAATCTGGACAATCTCGAC
AACGGGGGAGCGTTGTTCGGCGCCTGCATCGTAGCTTCCCGAACAGCGAA
CCTGTCCGTGCCCAAAGAAACATGCTGACCGCTAGTGAAAACCGGGGAGT
CAAGGGCGGAATTGTTTGGTGTTCCCTCATTCCCTCGACATAATGATATT
TTGTAATCTGGTGGCCACGGAAAGAGAAGGAGATGCCTTTCGAAACGGAA
CAATAGAGGTGTCGCCTACATTCGCGCGCTCTCTGCTCTAGTCTTCGTAG
GAAGAAGGGGGTACCGGGGCGGGGGGAGGGGGTGGGCTTCGACCTCTACG
GCACGGGTAGTACCGCTTTATGTTACGGGTACCGCTTGATGTTGTTGTTT
GTTGTTTGAGGCATCAAGACGGTTAGGATCAAGTGTACGAGGAGGAGGAG
GAGGACTTGGCGTGTCATGTCATGCTACATGTTCTCATGGGTGACGGCCG
ATACTCATTGGTACAACCGTGGCCTCCTTTGGCCAATATGCCGAGTAGTT
ATCTTCCTGTTATCTTCAGTGTTTTTTGTCCCGCCTTTTCTCGTGGTGGG
TCCGTGCGATGAGTCCACCTATCCCTCCTTCGCGTGTGTGTGTGTGATGT
GTGTGAGAGACCTCGGGCGACGAGCACTGACAAGCCCTGCGCTGTGCTCT
ACTACTGATGTGCCCGTCTGCGCTACTACATAGGTGCACGAAAAAAGCCT
GCTGCTGCCACTCTGCCCACTGGCGTTTCTCTGGAGAGACGCGCCCCTGT
TCACGACGTGGCTACAGGTACATCCAAAGCGGTGTCTGGATGTCTGCAGT
AATCTTTAAAACATAGTCACCGTTCGTTTAGTGTGTGGGTGGACCAACAT
GCTGCTGTGACGATTTTGCCGCCCCCGCAATGCGCAATCCACCAAGAAGG
AAATTGTCACGGAACTCGCTACAAATACACAGCTGGATTTTGTGTTCCTG
CGTGGACACCCCGGTTCTTTTGAGGGGGCAAGTGATTTTACTGGACGCGG
TGTTTTGGTTATTACAATATTACAATAGCCTTGTGACTACGGAAGACATG
TGCGTAAGTTGGACCATTGCTAGTGAGTGTATTTGGGAGGTACTTACAAT
AGCAGAGATTGGCGCTGTTTTTTATGTGAATACAATAATAACAATATTGT
AACAATAGCATCAGCAGTATGAACATGGCGTCATCTCTTGTTGGCCTCGT
CACCCTGTCGTAACCAATCCCTGCTCGTGCTCCTGTGCTGCTGTCACATC
TATCGTGACCAGGTTATCGGCGTTTTCAGCATGAAGCCGTTGCTCGCTCG
GGAAGGGCTGCTCGTGCCTTGTGTGGTGTGCACCTTGCTCTACGTCGCCG
CCTCGGTGGTAAGTCACACCCATCGCCCATCACCCATCACCCATCACCCA
TCACTCACCACTCATCCACTTTAGTGATCATCCATCAGCATCAGTCTGCG
TGTATGCTGAGATAGATGCGATCGTTGTTTTGGGCCTTTCACACAGAGGC
AAGAAGACCGACGCTCCAAAACAACAGCAGCAGGCACAGCAGCGGGAACG
AACGTAGCTACAGTACCTACCGAAAGACCCGCGAGGACTCCGAGCTTTGA
ATTGAACTGTTCAACACTGTAGTAGTATCACCCGCGGTGACACCCACGGA
GAAGGCACGGCTTATCTATCGGCGAAGAAGCCTCGCACAAATGGAGCAGC
ACAGGGTAGGTTTGGCCGAATGCTTTTTGTAGCCTGAGTTGATCTTAGTA
TGGAAATTTCGGAGAATCTTATCTTACTGCTTTTCTCGGGATATCGCTGA
CTGTAACCCCCAACTTGCAATTGGGCGAAGAGGCCATGGGGTGGCGCTTG
TATGCAGTGTGCGGAGGCACCGAAAGGAGCTACGATTGTAGAGCAGACTC
TTGTTGGTGCCATATGACACGATGAGACGCCACCGGAAAAAAAAGTTGAT
GTTCGGGGGGGGGGGGGGGGTCGCTGCGGTCCTCGGGCGTCATCAGATCG
ATCGCAAACCCTTGAGGGAAAAGTTGTGGACCCTTTTTTCAAAGGAATCG
ATGCTTGCTTATATGGTGTAGGTTTGTGCTTTTAACAAGCACGATGACCA
CTAAATAGACCACTAGTCAGCGCTGACTAGTCGTCTAGTGGTCATCGTGC
TTGTCAAAAAAAGTTAATGCCCGAGTCCGTCAAGCTTTCTTTCAAGCCAC
GAACACGCCCCCCGAGGTTTGATCAGCTCTGTCTTGCCCGGAGACTTCCT
TCGGTACAAGAGGTTCATCGGCTCACTTTGCCAAGCCTCGTCAGACGTTT
CACTCCCATGTATATATCGGGCGCAACTAAAATTCTCGAAGGATAAACTG
TTCAAGGGGAGATTCGAACCCCGGACATGAGCTTTTGTTCAGAAACAAGA
TGACCACAGACTACTAGTCTGCATACCGTAAGGTTGCGAGTCAGCGCACA
GGGTTGCGATCGATTTTTAAAGCGTAATTTCCCCACAACCAGGAGGGTGC
GAGCGCCAACTGATACTTCTCAGGAAAGCTCTCGATGAGATATTTCCAAA
ACCGCCCTCTTCGACAGCAGCAATGGTAAGTAACCTCCTGGTTGTGGAGA
AATTTCGCTTTGAAAATCGTTCGCACCCCTGTGCGCTGACTCGCAACCTT
ACGGTACCTCACAATCACTCACTCACACCTTGGCTCGTGTTGTATTTGTA
CCTGCCTTCGTTTTGGTAGACCGGAACGATGGTCCCAACTCTATATTTCA
ATGTCTCACCATATTTACGTATACCATGCATAGCACCAACAGAGCTACTT
CGGCGCCTCAACATGACAAGATGTCAAGTCACTTAAGCGTCTCTTATATG
GTATACCATGCATAGCACCAACAGAGCTACTTCGGCGCCTCAACATGACA
AGATGTCAAGTCACTTGAGCGTCTCTTCAGAAACTGGAAAGCCTGGTACA
ACAGCAGTAATACTGTGCTGCTAGGACGGGGTACATTTTTTGTTTCATGC
AGGCATCGGCAGCAAACCCATAACGGTGATGGAGCAATAATCTGGAAGGC
TGACGAAGGAGGAAGTGACTTCGGGATCGATCGTGTGTCTCACCTTACAC
CACCTATGTTCCTTCTTTGCTTTGTGTTGGATTTTGTTGTGTCAGTTTCT
GGCACTACCGGAGGGCGACGTGGGCGAGCCAGCCGCTTCTTCTTTTCCAT
ACGGGAGGTAGGTCAGGCCGCAATGCACGCGTTCCGTAGACTAGCGCCGA
TGCCACGGGATGTATACATTGATCGTTGAAAATATTCAGAACATCAGCCG
GGACATGTCCTTTCCCACAAAAAGGCGGTCCAGACCGCACGCGACGTGCT
CCTCGTACAAATTGAGGAAGATGGCGTATCAACGAGAGTAACAAGTAGAG
CAGATAAGATACTGTCTGTGTGCACGCCCCGGCACCTCTTTGACGACGCC
ACACGCACAAACCATGTGGGACGTTGAACGGTCAACATATGCCTGACAAA
AGAGGCACTCATTACAAGGCAAGGAAATTCGGAAATCGGGGTACTGTTGT
ACCTGGGGGTACGTGACTTCCACAGCGACGCCTCCAGAAACCGAAACCGT
CAAGAGCTATGTACGCAACGCTACATCACGAATAATATTTTTAGTGACGC
GCCAAGCTAAATGCATGCAGAAACCGTCCGGTGGGTGCCTCACCACCCTG
CCTGGGTTAGGTATCAGATACACTTGCTGCCCACCGCTTTATTATTTACA
AAATATTGTTGTCTGTGGTGACCCTGAGTAAGATGTGCGTACGATGGCAG
GCCGGTTCGATCTCTCTCTCTTCTCCCTCCTCTTTCGCCACCTCGCACTA
TATCACCAAGTACTTCAACAAACTGACTGACGTACTTGCTGCACAGGTGC
TTGACTCGCACACGCCTTGGAGTGATGGCGGCTCTCTCGCTCGGAGGCAT
GCTGCTGCTGCTGGGGTTGGAGGCAGCCGTGCCGCCTCCGGCGGCGCTGC
CGTACCTGCACCCCACCTTAAACGCCATGTACTCGTGTGCAAACCTCACG
GCGGCCTACGGGATCGGCGTGTGGTGGCAGTGGCGAGAGGGGACGCGTGG
CGGCGGGAGCGGGGTGGGCGAACGGCAAGACCGACTTATGTCGCACGAAA
CGGGCACAAAGAAGGATCGATAGCAACATGATGCAAACGACGGACACGCT
GGTGCTCGGTGTTCTGAGATCTCTTCGATTCTTGTGGCTCGCTCCGGGCA
ATCGACACTTGGCACGGCAGTAAGCACGTGGGCACGCTTACATCGATGCG
CGAGACGTGGGACCCTTTCCAACACGCATCCTGCTGCTTGCGGAGTTGTG
CGACTTTGTTTCGTTTAGACTGCTAGAAGAGCTCCGAAACCTTGCGCAGT
ACGATATGGTGGTGTGTAAATAGACATGCATAGCATCTAGGATTTTTTTT
CATGGAAGTAAGAGGGTTATAGGACACTCAAAGGGGGGAAACGGGGAAAC
GTACCGAGCGCTTTGTCTGCACTACCTTTCTTGTAGTTGGGCATTTGGTG
TAGACGTGTAGACGGAAGTTACGTCCCGGGTGTGCCTGTCGCACATAGAA
TTAGACTCTTCTCGGTCCTGTCGAGGATATTTCGGAACTTGAACGACGTC
TACATAGAATAACATACGCTACGGGCGAAGCGAGGAGAGGTACTCACCCA
CAGACCGCACAAAGAAAAAATAATATGACTGATGTGTTGAAGTCTGAAGT
CTTGGGAGTGAGGTTCGTCTTCCGCAAATCACGAAACGGTCCGGGTCACC
CATCCCGTCAGCGAGCTAAACCGGAGATAGGCGCCCCGCCAACCCGTCCC
TGGCCATCAAAAAGTGCATGTATGCTAGGCGTGATCCACCATGTATGTGT
GCTGCTGTGGGGGACACGGACGGTGTAAAAAGGTGTTTTGTTATTTTATC
GTTCAACCTTTTCCGATGTACAGCGCATGCGATAGCTTAAGTTAGGCCAA
AAAGCCTCGGTGCGTGTATCTGCGTAGAGCATCAGGCGTGTTGACACTAT
TCTTGACGCTGGGTATAATTAAAAAAATGCAGTTGTACCCGGAACTAGAT
GGTGCATTTCGCAGACACCATGACGGTACCGACGCATGTTACAGGCCATG
AAAGACATTACGGCCAAAAACAATTTTCGACTCTGTACATGGATGCATCA
TGTACAGCAGTGGACATAGCAGTATTGAATACCTAGAGTCCGAACTGTAC
AACTTGGACCCGCAGGATACAGGATACAGATATCCTCAAAGGCCCTGGCC
GGTGCGTCCAACATACAGCCGTGAGGACAGG
back to top

Coding sequence (CDS) from alignment at chr_00:8670610..8682840+

>Ec-00_005450.3 ID=Ec-00_005450.3|Name=Ec-00_005450.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=624bp|location=Sequence derived from alignment at chr_00:8670610..8682840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGTTGGACCAACCAAACGGCGTTGCCCCCTACAGGAAGCCATGCGGA
TGGCACAGCGACGTCGTTGAACCGTTTGTCGGGGGTGTTGCGGCGGGTGC
TCGGCCTCGGGTCTGTGGTGATTATCACTTTCATGGTCTTGTGGGCACCG
TTCTGCCTTTTGCGGGACGATGATTCTGAGGATGGTTCCGACGCGCAAAG
CGGATGCCTGTCTGCGATGGGCCAGGTGTCAGTGAGGTTGTTCCCCTTCT
CTCGGGGACTGTTCGAGGACAAGGTCGCCAACCTCTGGTTCTGCCTCGAC
GTCGTATTCAAGCTGAGGAGGAGGCTGCCGGTGCCGCAACTCGCGAAGCT
GGCTCTCGCGTCGACGCTGAGCCTCTTGGTGCCGGTGGGAGCGGAGCTGT
TGAGGCCGGGCCGATCGCCGACGGCAAGGAGGCTGGTGCTGGCCCTCTTC
AACAGCTCCATGGCCTTCTTCTTGTGTTCTTTTCAGGTGAGGTGCACGAA
AAAAGCCTGCTGCTGCCACTCTGCCCACTGGCGTTTCTCTGGAGAGACGC
GCCCCTGTTCACGACGTGGCTACAGGTACATCCAAAGCGGTGTCTGGATG
TCTGCAGTAATCTTTAAAACATAG
back to top
Synonyms
The feature 'Ec-00_005450.3' has the following synonyms
Synonym
Esi0442_0014
Esi_0442_0014