Ec-00_005370.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_005370.2
Unique Name	Ec-00_005370.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	149

Homology

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BLAST of Ec-00_005370.2 vs. uniprot
Match: D7G7Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y6_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 4.000e-125
Identity = 188/199 (94.47%), Postives = 193/199 (96.98%), Query Frame = 3

Query:  960 FRENQRVDACSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEVLWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGPAKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPALPF 1556
            F ENQRVDACSYQTIECAAATGIVRKTRMGALCYPD ADTAGTDNTGGELT PVSIGEVLWAGSEVTAFA RRGSVTHIHVDALEV+EKPL+LPAAGAMRSVNRGDRGPAKRA+VVCAHDMDRVVRLFKLDVRKPPAMQYGG VSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCA+M VTLRLVETCAW+PALPF
Sbjct:  194 FEENQRVDACSYQTIECAAATGIVRKTRMGALCYPDTADTAGTDNTGGELTKPVSIGEVLWAGSEVTAFATRRGSVTHIHVDALEVNEKPLFLPAAGAMRSVNRGDRGPAKRAIVVCAHDMDRVVRLFKLDVRKPPAMQYGGAVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAHMSVTLRLVETCAWNPALPF 392

[Close]

BLAST of Ec-00_005370.2 vs. uniprot
Match: D7G552_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G552_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 6.790e-78
Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 2

Query:  404 PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLRPVFRCLLR-EISRGL*WGLLVKQLSGSTSRSWGTLE 835
            PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGS GIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACL   F  L+  +I+R + WGLLVKQL GSTSRSWGTLE
Sbjct:    8 PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSRGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSV-WGLLVKQLLGSTSRSWGTLE 151

[Close]

BLAST of Ec-00_005370.2 vs. uniprot
Match: D7G2S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S5_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.870e-68
Identity = 121/197 (61.42%), Postives = 140/197 (71.07%), Query Frame = 3

Query:  960 FRENQRVDACSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEVLWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGPAKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPAL 1550
            F E+ +VD  S+ TIEC  A+ +VR TRMG LC+PDR  T G     G LT   S+    W+GSEVTAFAMR G VTH HVD   V  + LYLPAAG MRSVNR   GPAKRA+++CAHDMDRVV L  LDV KP + QY G + DL  LA  L+ NSI FVV+DFPE CSYAIP +CA+MFVTLRLVE+CAWHP L
Sbjct:  425 FEEDDKVDVLSFNTIECVGASDLVRNTRMGGLCHPDRPPTRG-----GVLTGTTSVRGKSWSGSEVTAFAMRTGGVTHSHVDPQMVHGEHLYLPAAGTMRSVNRRGSGPAKRAILMCAHDMDRVVDLLGLDVNKPSSSQYTGAIVDLEGLATRLRVNSIRFVVVDFPEYCSYAIPARCAHMFVTLRLVESCAWHPIL 616

The following BLAST results are available for this feature:

BLAST of Ec-00_005370.2 vs. uniprot

BLAST of Ec-00_005370.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G7Y6_ECTSI	4.000e-125	94.47	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D7G552_ECTSI	6.790e-78	89.66	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G2S5_ECTSI	1.870e-68	61.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:8472613..8477709 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2336
Hectar predicted targeting category	other localisation
Gene id	Ec-00_005370.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	Ec-00_005370	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 8469979..8477709 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.2	Ec-00_005370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 8473714..8475890 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.2.1	Ec-00_005370.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8472613..8472743 +
Ec-00_005370.2.2	Ec-00_005370.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8473229..8473287 +
Ec-00_005370.2.3	Ec-00_005370.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8473620..8473737 +
Ec-00_005370.2.4	Ec-00_005370.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8474942..8475039 +
Ec-00_005370.2.5	Ec-00_005370.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8475566..8476129 +
Ec-00_005370.2.6	Ec-00_005370.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8476344..8477709 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	5UTR:Ec-00_005370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 8472613..8472743 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.2	CDS:Ec-00_005370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 8473714..8473737 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	3UTR:Ec-00_005370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 8475891..8476129 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:8472613..8477709+
coding sequence from alignment at chr_00:8472613..8477709+

mRNA sequence

>Ec-00_005370.2 ID=Ec-00_005370.2|Name=Ec-00_005370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=149bp
MVSPPCSQSLKTNDASTNMSLELIRVRGQNRRVRHHLTVRSPGVQRKKRT
RRDATMSGRASSAANMAKPWRRKLATSWSTCGTRENLKMARIASVTGLGV
LTMVSFTDSFQETTPPPTMLVGERTMATPSGARARRDEGIATACSGHA*

spliced messenger RNA

>Ec-00_005370.2 ID=Ec-00_005370.2|Name=Ec-00_005370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2336bp|location=Sequence derived from alignment at chr_00:8472613..8477709+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGCAGGGAAACGGTTGGCAACGAGCCAGTCCCGTAGGAGCAAGGGAGCTG
AGCCTCGTTTGGTGCTCAGGCAGCTAAGGTGCCCATACGGGATGCCCAAT
CGACAGGCGGCTCGTGCGGCAAATGGTGGAGGCGACGGAGGGAAAACGGT
TAGGCCGAGGAAATCGCTAAGAATCGGTTGTCCGTTCTCGGTGACGATCC
GATGGCCCATGACCGGACCACGAAAAGACCACCCTTATCTCGCCGACGGC
GTCAACAAACTGTACCACACCCACCCGGTCGACAATGGTGTCGCCACCCT
GCTCCCAGAGTCTAAAGACCAACGACGCGAGTACGAACATGAGCCTGGAG
CTGATACGCGTAAGGGGACAGAATCGCCGCGTGCGACACCATTTGACAGT
CAGAAGCCCCGGGGTCCAGAGGAAGAAGCGAACGAGGAGAGACGCGACGA
TGTCAGGGCGCGCATCCTCCGCTGCCAACATGGCCAAGCCCTGGCGAAGG
AAACTTGCGACATCCTGGTCGACATGTGGCACAAGGGAGAACTTAAAGAT
GGCACGGATAGCTTCGGTGACGGGTCTGGGGGTATTGACAATGGTCTCTT
TTACGGATTCCTTTCAAGAGACAACGCCCCCCCCTACAATGCTCGTAGGA
GAGAGGACGATGGCGACTCCTTCTGGAGCAAGGGCGAGGCGAGACGAAGG
CATAGCGACCGCGTGTTCCGGGCATGCTTAACGGCCGGTTTTCCGGTGCT
TATTGAGGGAGATATCACGCGGTCTGTAATGGGGGCTGTTAGTAAAGCAG
CTGTCGGGAAGCACATCTCGAAGCTGGGGAACCTTGGAATGAGGCGCGGA
ACGTCCATGTTTAGCTTGTCGGAGGAGTTCGTCGACTGCTGGGTCGAAGG
GAACGTGGGGGACAACATGCTAAGAGATGCCTTCGGTGTCAAGACGACAT
GGACGATTCAAAATTTCGAGGAGAACCAGAGGGTGGACGCTTGTTCGTAT
CAGACGATAGAATGCGCCGCCGCAACAGGTATCGTGCGCAAGACCAGAAT
GGGAGCCTTGTGCTACCCTGACAGAGCTGACACAGCCGGCACTGACAATA
CGGGAGGCGAACTCACTAATCCGGTGTCGATAGGAGAAGTTTTGTGGGCG
GGAAGCGAGGTAACGGCATTTGCCATGAGGCGCGGTAGTGTCACCCACAT
TCACGTGGACGCCCTCGAGGTTGACGAGAAGCCCTTATACCTTCCGGCAG
CCGGTGCCATGCGGTCTGTGAATCGGGGAGACCGCGGCCCTGCGAAACGA
GCAGTAGTAGTTTGCGCCCATGACATGGACCGAGTAGTACGGCTCTTCAA
ACTAGACGTACGCAAACCTCCGGCGATGCAGTACGGCGGGACCGTTTCAG
ACCTCCGACGGTTGGCCGCCGAGTTGAAGGCCAACAGCATCGGGTTTGTT
GTCATCGATTTCCCGGAAGCATGCTCATATGCGATTCCGGGAAAATGCGC
ATACATGTTCGTCACACTGCGGTTAGTTGAGACGTGCGCTTGGCACCCGG
CTCTGCCCTTCTGAAGAAAACGTCACCCCGATCGTGGCCCGGATTCCAGG
AGGGTTGTGGTCGGCATATCGACGACATTCTCCGTAGGTGTGTGTGCTGT
TGTAAGTAGAAGCGCGCACTGCAGTCAGTGGGCAGTGCTGGGTGCGTTCC
ACTAAGGGTGTTTGAAGAGGTTCGCCGTTGCTGTAACCACGATGTCGCAG
AGGTCGACATGATCATGTTTGTGCGCAAACAATCTAGCGTGCCTATGTAT
TTTGCAGCGGATAGCCTCCCCCGAGATGCTCGTTTTCACGCCCGGGACAC
CCCCGACTCGGACAAGCGATCCCTATAGCCAAGTAATTTGCTGGCAGTCG
CTGCAGAGGTGGACAAATGGTGTGGAGGTTGACGATCACGACGAAATAAA
TTGACCTTCGACGACGACGAGGTATTGCCTCCGCCACGATGTCCATCACC
ACCACGTGGTGAACAGCGCGCAGACCTCGGTTAACGCGCCACGGCAAGCG
CTAGATGTTGGGCCACGACTAGGCTCGCTGCTTGGGCTGAGATCGGCTTA
TGCCTGAGACCCGACCGTTGGCTATGCGAACGAAAACTGACTGGTCAAAG
AAATAACAAGAAATACGTGGTGACCACACCCAACGCAGATATTGGGACTA
GTGCACGGGGGCGCTTGCTGCATTTCTTCGTTTAACGATTTCGTCCATGT
ACGACAAACAACAGGACGTTACAGCAACAACGTGTTTCGAGCGAATGAAG
TCCGCCGAATAGACGAAAGGTACGCCAGCCAGTTAG

protein sequence of Ec-00_005370.2

>Ec-00_005370.2 ID=Ec-00_005370.2|Name=Ec-00_005370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=149bp
MVSPPCSQSLKTNDASTNMSLELIRVRGQNRRVRHHLTVRSPGVQRKKRT
RRDATMSGRASSAANMAKPWRRKLATSWSTCGTRENLKMARIASVTGLGV
LTMVSFTDSFQETTPPPTMLVGERTMATPSGARARRDEGIATACSGHA*

mRNA from alignment at chr_00:8472613..8477709+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_005370.2 ID=Ec-00_005370.2|Name=Ec-00_005370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5097bp|location=Sequence derived from alignment at chr_00:8472613..8477709+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGCAGGGAAACGGTTGGCAACGAGCCAGTCCCGTAGGAGCAAGGGAGCTG
AGCCTCGTTTGGTGCTCAGGCAGCTAAGGTGCCCATACGGGATGCCCAAT
CGACAGGCGGCTCGTGCGGCAAATGGTGGAGGTGAGGCTTGCACGGCACA
ATAAGGGAACCCATGCGTAGTGTTTAGTAAATCTCAGATTTGTTGTCGCT
GGAAGCCCACTTGAACAATTCGGTCGCGAGAGAGTCCCTCTAGTCGAACG
CCTGCCCTTTTTACTACCTTGCATGTAATGGCGGGCGGAATGTCTGTGTT
TGTGCTAGGGCGTTCAGCGGGACATTTCGGGATACTAAATAACTGTCGTG
TGGATACCCCTGGATCTTGTACGTTGCGACTGGAGTGGCTGGATGACACC
AGCACGTAACTCGCCTGTTGCTGCGTATTCGCAGGTGGTATGAGGATTCG
ATACCCCTAGGCCTCTAACGATGAGTCAACCTCTTCGGAGGGCGTACAAC
CGCGTTTGTCGAATCCTACGTTGTCCGTACAATGCTACGTTGCCCGTTGC
AATGTCTTGCCCCTATGCCCTGGTTACATAGACGTTTGCGGACTCCCTCT
TGCACGCTGATGCCAGGCGACGGAGGGAAAACGGTTAGGCCGAGGAAATC
GCTAAGAATCGGTTGTCCGTTCTCGGTGAGAGTATATACCGCTCATCATT
GCGTCGACGAGCCCGTTTACTATCGAGTGTGTTGGAGTGTGGTTCAGGGT
GGTTGGCCTGCCTGCGCAAGCAAGTTTGGGCTGCGCGCAAGGCATGGGCG
TTTAAGGTTGACGAGAGTCCCAGTGCGAGGCCTACGATATGCCACCTGTC
TCGGCGATACGTAACAAGGACCCGTGTGGACAAGTGGGACGTTCGACCAA
TACGATAGATGTCGAAGGGGCCCCCAACGGTAATGTCGACGAACCACCGC
GGCGGTCCAAACCCGGTCCCATGCCGTTGTTCTTGGTCCGTCGATGCATA
TCGTTAGGTGACGATCCGATGGCCCATGACCGGACCACGAAAAGACCACC
CTTATCTCGCCGACGGCGTCAACAAACTGTACCACACCCACCCGGTCGAC
AATGGTGTCGCCACCCTGCTCCCAGGTAGGCCGTATTTTCTTGCATGTCA
CACCACATGTTCACCCGTGGTATGTAGGCGCGTACACAACAAGGCGGTCC
CAACTCTACACCAAGCAAACCAAATATTCTGCAGTATTGTTGTGCTACAG
CAGCATTCATATTGCATGCATAGCGAAACGCGGCTATCGCAAGCCACGCA
GATGATGTGCCTAACCAATTAACTGTTATACGGTCGAGAACAGCAGTACA
CTTATTATTGGGGGGTGAATTTTCCGGCGCGGTTTGGAACCTCGGCAACG
TCATTTTCCGTTTAGTTCTGAGGGTGAGAAGAGACGAATGTGCATTGCCC
CGATCTTAGCGGGTTGGTGTATCTTAGTCACTGCGCCATGATGGTGATTG
TCTTCCTCCGAAGGATAAGACGGCACAGCAGTCCCGGTGTAGTTAGGTCT
TACCGACTTGTGCCACCCCCGGGAGGCATGCTCCGACCTCCCGGAACGGG
GAACCTTGTTCTATACACATGTCATACTGCAGAGTGGTGCTGCAGATAGA
GTCTTTGCCACTGCTTTCTTGGAGCAGCCATGGAACCCGTTGTACGCGAC
GTGTACGCGACAACTGTCTCTAGGATGTAGGTGACAGCAGGCTCTGGTGT
GCAGGTTGACAGGATAGCCTGCCTGCTCGGACAAAGCAGAAACTGCACCT
CCCCCCCCCCCCCCCCGGGGAAGGTTGGGCCAACCCCCGCGGGGTTTTGT
ATGTCCCAAAAAATATTTTCCCCTGGAAACCAAAACCCCGAAAACCTTGG
GTAAAGCCCCGGACCCACCCCCCCACGCCCGTTGTTTTCACCAACCCGAA
TCTAAAAACCCACCACCCCAGTACCAAAATTAACCCGGGGCTGAAACCCG
TAAAGGGACAAAAACCCCCCGCGCGACACCCTTTTACAATCCAAAAGGTA
AAACAGAAAAAAATGGGGGGGGGCCCCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCCCCCCCCCCCCCCGTGG
TATGCTTGGTCAACCTCGCGCGTGCTTTGCTATGTCCTAAAATATATTTA
CGCGTGATAACAAAACCCACGAACACTTCGGGTAACGCCCTGACCCAACC
ACTCGACGCCCGTTGTTTCGACGACGCAGAGTCTAAAGACCAACGACGCG
AGTACGAACATGAGCCTGGAGCTGATACGCGTAAGGGGACAGAATCGCCG
CGTGCGACACCATTTGACAGTCAGAAGGTTAGATCAGAAAATACTGAGGT
GGGCCCCCGTAGGCCAGGGTTAACTAGGCACACACGTATGCGCTGGAGGA
TGAAGGGGACTCGGTCAACAAGAAACTAATCTCGATGAACAGGTTAGGTC
CAGACTACCCACTCTTCGTCCTCCTGGTACGAGCCGGGGGGACTTGGTCA
TTAGGTGGACGGAAGATGCCTGTCCCCGCAACGCCAACCCAGGGTCGACG
ATGGTATCCCGGCGAAACGTGAGGTCGTAACACGTCTCAAATCGCGCGGC
GGGCTCGTACTATTTTCGCGTCGCGCAAACATGCACACCTCGTGACACCG
TTCGGGTGTAGAACAGCAGGCAGCGTTTGTCGTAGGTGCGTAGCCGGTAC
TCCACCCGGTCTATCAACGCCAGAACGGCCCCACGGCTGCCCTGTTTTAT
TCTTCATATCAGCATTGCTGAATCGATTTCGGGCGGCGAGCATCTGACGC
GCAGACCCATACGCCGGACCCCCACACGTCCTGTGCCTGCACATCTTTCC
CAGCCCCGGGGTCCAGAGGAAGAAGCGAACGAGGAGAGACGCGACGATGT
CAGGGCGCGCATCCTCCGCTGCCAACATGGCCAAGCCCTGGCGAAGGAAA
CTTGCGACATCCTGGTCGACATGTGGCACAAGGGAGAACTTAAAGATGGC
ACGGATAGCTTCGGTGACGGGTCTGGGGGTATTGACAATGGTCTCTTTTA
CGGATTCCTTTCAAGAGACAACGCCCCCCCCTACAATGCTCGTAGGAGAG
AGGACGATGGCGACTCCTTCTGGAGCAAGGGCGAGGCGAGACGAAGGCAT
AGCGACCGCGTGTTCCGGGCATGCTTAACGGCCGGTTTTCCGGTGCTTAT
TGAGGGAGATATCACGCGGTCTGTAATGGGGGCTGTTAGTAAAGCAGCTG
TCGGGAAGCACATCTCGAAGCTGGGGAACCTTGGAATGAGGCGCGGAACG
TCCATGTTTAGCTTGTCGGAGGAGTTCGTCGACTGCTGGGTCGAAGGGAA
CGTGGGGGACAACATGCTAAGAGATGCCTTCGGTGTCAAGACGACATGGA
CGATTCAAAATTTCGAGGTGAGCTAGCCTTGAACGCCAAGGTTTAGTCAG
TGTAGCTGTAGCTGTATCTGTAGTGGGTTAGGGGTAGGGTAGGGACAAAC
GGTCAATTGCAAATTGGGGAACCGGTTGAAGAGTAAGACAGCACACTTGG
CGCAGGTTCGCGGTGGGGCTAATGGTATCGTGAACGGCCCGCCCCATCAA
CGTGTGTTTGTGTACGGTGCCTGTTGTGCAGGAGAACCAGAGGGTGGACG
CTTGTTCGTATCAGACGATAGAATGCGCCGCCGCAACAGGTATCGTGCGC
AAGACCAGAATGGGAGCCTTGTGCTACCCTGACAGAGCTGACACAGCCGG
CACTGACAATACGGGAGGCGAACTCACTAATCCGGTGTCGATAGGAGAAG
TTTTGTGGGCGGGAAGCGAGGTAACGGCATTTGCCATGAGGCGCGGTAGT
GTCACCCACATTCACGTGGACGCCCTCGAGGTTGACGAGAAGCCCTTATA
CCTTCCGGCAGCCGGTGCCATGCGGTCTGTGAATCGGGGAGACCGCGGCC
CTGCGAAACGAGCAGTAGTAGTTTGCGCCCATGACATGGACCGAGTAGTA
CGGCTCTTCAAACTAGACGTACGCAAACCTCCGGCGATGCAGTACGGCGG
GACCGTTTCAGACCTCCGACGGTTGGCCGCCGAGTTGAAGGCCAACAGCA
TCGGGTTTGTTGTCATCGATTTCCCGGAAGCATGCTCATATGCGATTCCG
GGAAAATGCGCATACATGTTCGTCACACTGCGGTTAGTTGAGACGTGCGC
TTGGCACCCGGCTCTGCCCTTCTGAAGAAAACGTCACCCCGATCGTGGCC
CGGATTCCAGGAGGGTTGTGGTCGGCATATCGACGACATTCTCCGTAGGT
GTGTGTGCTGTTGTAAGTAGAAGCGCGCACTGCAGTCAGTGGGCAGTGCT
GGGTGCGTTCCACTAAGGGTGTTTGAAGAGGTTCGCCGTTGCTGTAACCA
CGATGTCGCAGAGGTCGACATGATCATGTTTGTGCGCAAACAATCTAGCG
TGCCTATGTATTTTGCAGCGGATAGCCTCCCCCGAGATGCTCGTTTTCAC
GCCCGGGACACCCCCGACTCGGACAAGCGATCCCTATAGCCAAGTAATTT
GCTGGCAGTCGCTGCAGAGGTGGACAAATGGTGTGGAGGTTGACGATCAC
GACGAAATAAATTGACCTTCGACGACGACGAGGTATTGCCTCCGCCACGA
TGTCCATCACCACCACGTGGTGAACAGCGCGCAGACCTCGGTTAACGCGC
CACGGCAAGCGCTAGATGTTGGGCCACGACTAGGCTCGCTGCTTGGGCTG
AGATCGGCTTATGCCTGAGACCCGACCGTTGGCTATGCGAACGAAAACTG
ACTGGTCAAAGAAATAACAAGAAATACGTGGTGACCACACCCAACGCAGA
TATTGGGACTAGTGCACGGGGGCGCTTGCTGCATTTCTTCGTTTAACGAT
TTCGTCCATGTACGACAAACAACAGGACGTTACAGCAACAACGTGTTTCG
AGCGAATGAAGTCCGCCGAATAGACGAAAGGTACGCCAGCCAGTTAG

Coding sequence (CDS) from alignment at chr_00:8472613..8477709+

>Ec-00_005370.2 ID=Ec-00_005370.2|Name=Ec-00_005370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=447bp|location=Sequence derived from alignment at chr_00:8472613..8477709+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGTCGCCACCCTGCTCCCAGAGTCTAAAGACCAACGACGCGAGTAC
GAACATGAGCCTGGAGCTGATACGCGTAAGGGGACAGAATCGCCGCGTGC
GACACCATTTGACAGTCAGAAGCCCCGGGGTCCAGAGGAAGAAGCGAACG
AGGAGAGACGCGACGATGTCAGGGCGCGCATCCTCCGCTGCCAACATGGC
CAAGCCCTGGCGAAGGAAACTTGCGACATCCTGGTCGACATGTGGCACAA
GGGAGAACTTAAAGATGGCACGGATAGCTTCGGTGACGGGTCTGGGGGTA
TTGACAATGGTCTCTTTTACGGATTCCTTTCAAGAGACAACGCCCCCCCC
TACAATGCTCGTAGGAGAGAGGACGATGGCGACTCCTTCTGGAGCAAGGG
CGAGGCGAGACGAAGGCATAGCGACCGCGTGTTCCGGGCATGCTTAA

Synonyms

The feature 'Ec-00_005370.2' has the following synonyms


Synonym
Esi0432_0016
Esi_0432_0016