Ec-00_005230.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_005230.1 vs. uniprot
Match: D8LMQ3_ECTSI (Nitroreductase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMQ3_ECTSI) HSP 1 Score: 615 bits (1587), Expect = 5.960e-216 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1 Query: 79 MFSRVVRPQEALLGRCIRKHGVAESLRCSAAMFSVRSSSPRLRQGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGVDPVVP 1026 MFSRVVRPQEALLGRCIRKHGVAESLRCSAAMFSVRSSSPRLRQGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGVDPVVP Sbjct: 1 MFSRVVRPQEALLGRCIRKHGVAESLRCSAAMFSVRSSSPRLRQGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGVDPVVP 316
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A835Z3C4_9STRA (Putative nitroreductase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C4_9STRA) HSP 1 Score: 219 bits (557), Expect = 6.410e-63 Identity = 111/234 (47.44%), Postives = 148/234 (63.25%), Query Frame = 1 Query: 310 RTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGV 1011 R AA F + V + +++A+T P+SFN QPW+ ++VRD +E L+ AM+G N KV AAP+TAVF ADL+P++R+ RM+E R+AG PE + + + LF GEG A+R VT SP++P P V S EAWS+K+ LA QTY+L+ TAHGL TAPMEGFD RRV AALD+PDRYG+ + V TGY P A WR+ P+E+VF FG + V Sbjct: 3 RHAAKRFLPDAVPEDIINDVLAMTIRTPTSFNAQPWACIIVRDEEQKEALAQAMVGPNIMKVRAAPLTAVFLADLQPTRRVPRMMEEERRAGTPEERVARLPAMIGLFGGEGAAAEALRRGVTAALSPLKPMPSVTSTEAWSYKHAGLAAQTYLLAATAHGLATAPMEGFDGRRVCAALDVPDRYGVAVAVATGYEDPQHAPS-------AASWRFAPEEMVFLDRFGAPVPDV 229
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A484DVA5_BRELC (Nitroreductase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVA5_BRELC) HSP 1 Score: 206 bits (524), Expect = 1.060e-57 Identity = 109/240 (45.42%), Postives = 150/240 (62.50%), Query Frame = 1 Query: 277 GLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPS-KPEGQGGGGGVARRWRYPPQEVVFDGTFG 993 G A +D + R A +F V L+EI+ LT AP+SFN+QP++ ++VR R++L+ AM+GGNA+KV+ APV AVF ADLEP+KR+ R+ +L +G P ++ V LFSGEG++ + +R ++T SP+QPAP S EAWSFK T+ A T++ + HGL T PMEGFD RVR ALDIPDRY +P+++ GY PS KP+ R P E+ FDG FG Sbjct: 26 GSTALKDAIEERYACKAFLPCHVSDETLKEILKLTLRAPTSFNVQPYACILVRQEKDRKKLAEAMMGGNARKVIEAPVIAVFAADLEPTKRVPRLQKLAYDSGAPADFVSNMPHVVRLFSGEGMISSMLRKIISTAVSPLQPAPSDVSTEAWSFKQTSFAAATFLYAAQVHGLATCPMEGFDIIRVRNALDIPDRYSVPVVIALGYADPSAKPK--------KLSERLDPTEMFFDGKFG 257
BLAST of Ec-00_005230.1 vs. uniprot
Match: W2YM79_PHYPR (Nitroreductase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=W2YM79_PHYPR) HSP 1 Score: 198 bits (504), Expect = 6.880e-55 Identity = 108/232 (46.55%), Postives = 140/232 (60.34%), Query Frame = 1 Query: 301 VTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAP-SKPEGQGGGGGVARRWRYPPQEVVFDGTFG 993 + R A +F V L+EI+ LTQ AP+ FN+QP++ V+VR+ RE+L+ AM+ N +KV APV AVF ADLEPSKR+ R+ L G P + V LFSGEGVV + +R A+ T SP+ PAP S EAW+FK TA A T++ + HGL T PMEGFD RVR ALDIPDRYG+P+++ G+ P +KPE R P E+ FDG FG Sbjct: 30 IEERYACKAFLPTPVPNETLKEILRLTQRAPTGFNVQPYACVLVREQKDREKLAEAMMDSNIRKVKEAPVVAVFAADLEPSKRVPRLQHLMHDNGAPADFVANMPHVVRLFSGEGVVASTLRAAIATAVSPLMPAPSNVSTEAWAFKQTAFAAATFLYAAQTHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHANPDAKPEKPSA--------RLDPTEIFFDGKFG 253
BLAST of Ec-00_005230.1 vs. uniprot
Match: H3GH55_PHYRM (Nitroreductase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GH55_PHYRM) HSP 1 Score: 199 bits (505), Expect = 8.470e-55 Identity = 122/284 (42.96%), Postives = 159/284 (55.99%), Query Frame = 1 Query: 190 SSPRLRQGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALT---------QSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPS-KPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGV 1011 SSPRL + A L A + S + + L A + R A +F + V L+EI+ LT Q AP+ FN QP++ V+VR+ RE+L+ AM+ NA+KV APV AVF AD EPSKR+ R+ +L G P + V LFSGEGVV + +R A+ T SP+QPAP S EAW+FK T A T++ + HGL T PMEGFD RVR ALDIPDRYG+P+++ G+P P+ KPE R P EV FDG FG G+ Sbjct: 5 SSPRLLRTATAGLLRPAVTQTRALSSAQKTLGA---AIEERYACKAFLPDAVPDKTLKEILKLTLVLTLLLLAQRAPTGFNTQPYACVLVREQKDREKLAEAMMDSNARKVTEAPVVAVFAADCEPSKRVLRLQKLAHDNGAPADFVGNMPHVVRLFSGEGVVASGLRAAIATAVSPLQPAPSNVSTEAWAFKQTTFAAATFLYAAQVHGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHPNPAAKPE--------KPSVRLDPTEVFFDGKFGQSSEGI 277
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A425CDF4_9STRA (Nitroreductase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CDF4_9STRA) HSP 1 Score: 196 bits (497), Expect = 9.820e-54 Identity = 108/229 (47.16%), Postives = 138/229 (60.26%), Query Frame = 1 Query: 310 RTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPS-KPEGQGGGGGVARRWRYPPQEVVFDGTFG 993 R A SF + V L EI+ LT AP+ FN QP++ V+VR+ RE+L+ AM+ NA+KV APV AVF AD EPSKR+ R+ +L G P ++ V LFSGEG+V + +R A+ T+ SP+ P P S EAW+FK T A ++ + HGL T PMEGFD RVR ALDIPDRYG+P+I+ G+P PS KPE R P EV FDG FG Sbjct: 45 RYACKSFLSDAVPDKTLEEILKLTLRAPTGFNTQPYACVLVREQKDREKLAEAMMDSNARKVKEAPVVAVFAADCEPSKRLPRLQKLAYDNGAPVDVVSNMPHVVRLFSGEGMVASGLRAAIATVLSPLMPVPSNVSTEAWAFKQTTFAAAAFLYAAQVHGLATCPMEGFDQIRVRNALDIPDRYGVPVIIALGHPNPSAKPEKPSA--------RLDPTEVFFDGKFG 265
BLAST of Ec-00_005230.1 vs. uniprot
Match: W4GD81_9STRA (Nitroreductase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD81_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.270e-53 Identity = 103/240 (42.92%), Postives = 141/240 (58.75%), Query Frame = 1 Query: 283 KAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGM 1002 +AFR + R + + + + L++IM TQ APS FN+QP++ V+V+D A R LS AMLG N +KV AP+ AVF +DLEPSKR+ + E+ R AG A+I + L + F GEG + A+RN ++T +P QP P AWS+K+T LAV YIL+ +HG+ MEGFD VR ALDIPDRY +P++V +GYP P A R P +V F G FG + Sbjct: 4 QAFRSLARQRRSVYKYQSKAIPNDILKDIMLTTQRAPSGFNLQPYACVLVQDAADRNTLSAAMLGDNVRKVKEAPLIAVFASDLEPSKRVPAIQEMMRSAGQSTADIQQLPLKLRFFGGEGHLAGAIRNGLSTALTPFQPVPTYVPTIAWSYKSTMLAVSQYILAAESHGIGCCVMEGFDETWVRHALDIPDRYSVPVVVASGYPIEVDPS-------PALSPRLAPSQVFFGGKFGAAV 236
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A2P4YJH6_9STRA (Nitroreductase family n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJH6_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.950e-53 Identity = 108/244 (44.26%), Postives = 143/244 (58.61%), Query Frame = 1 Query: 265 LSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPS-KPEGQGGGGGVARRWRYPPQEVVFDGTFG 993 LS K+ + R A +F + V L+EI+ LT AP+ FN P++ V+VR+ RE+L+ AM+ NA+KV APV VF ADLEPSKR+ R+ +L G P ++ V LFSGEG V + +R A+ T+ SP+ P+P S EAWSFK T A T++ + HGL T PMEGFD RVR ALDIPDRYG+P+++ G+ P+ KPE R P EV FDG FG Sbjct: 20 LSNSAQKSLGAAIEERYACKAFLPDPVPDETLKEILQLTLRAPTGFNTMPYACVLVREQKDREKLAEAMMDSNARKVKEAPVVVVFAADLEPSKRVPRLQKLAHDNGAPADFVSNMPHVVRLFSGEGAVASGLRAALATVVSPLLPSPSNVSTEAWSFKQTTFAAATFLYAAQVHGLATCPMEGFDQVRVRNALDIPDRYGVPVVIALGHANPAAKPE--------KPSVRLDPTEVFFDGKFG 255
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A3R7NF45_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NF45_9STRA) HSP 1 Score: 194 bits (493), Expect = 4.890e-53 Identity = 110/252 (43.65%), Postives = 140/252 (55.56%), Query Frame = 1 Query: 268 SPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYP----APSKPEGQGGGGGVARRWRYPPQEVVFDGTFGVGMTGV 1011 S K + R A +F + V L+EI+ LT AP+ FN QP++ VVVR A RE+L+ AM+ N +KV APV VF AD EP+KR+ R+ +L G + V LFSGEGV + +R A+ T SP+QPAP S EAW+FK T A T + + HG+ T PMEGFD RVR ALDIPDRYGIP+++ GYP AP+KP R P EV FDG FG G+ Sbjct: 23 SSSAQKKLGAAIQDRYACKAFLPDPVPEQTLQEILKLTLRAPTGFNTQPYACVVVRKQADREKLAEAMMASNVRKVKEAPVVVVFAADCEPTKRVPRLQKLAADNGASTDLVNNLPHVVRLFSGEGVAASGIRAAIATAVSPLQPAPSNVSTEAWAFKQTTFAAATLLYAAQEHGVATCPMEGFDQIRVRNALDIPDRYGIPVVIALGYPNPATAPTKPS-----------VRLQPTEVFFDGKFGQSSEGI 263
BLAST of Ec-00_005230.1 vs. uniprot
Match: A0A6A3XAN9_9STRA (Nitroreductase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XAN9_9STRA) HSP 1 Score: 193 bits (490), Expect = 9.470e-53 Identity = 119/282 (42.20%), Postives = 157/282 (55.67%), Query Frame = 1 Query: 151 SLRCSAAMFSVRSSSPRLRQGEDANLQEDADLSGNSSSLSPEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPS-KPEGQGGGGGVARRWRYPPQEVVFDGTFG 993 +LRC + S +S L QG +S S LS K + R A +F + V L+EI+ LT AP+ FN QP++ V+VR+ RE+L+ AML NA+KV APV AVF AD EPSKR+ R+ +L G P ++ V LFSGEGVV +R A+ T SP+QPAP S EAW++K A T++ + +GL T PMEGFD RVR ALDIPDRYG+P+++ G+P P+ KP+ R P EV FDG FG Sbjct: 2 TLRCPRVLSSATTS--LLHQG--------GPVSARSRCLS-SAQKKLGAAIEERYACKAFLPDAVPDKTLQEILKLTLRAPTGFNTQPYACVLVREQKDREKLAEAMLDSNARKVKEAPVVAVFAADCEPSKRVPRLQKLAHDNGAPVDFVSNLPHFVRLFSGEGVVARGLRAAIATAVSPLQPAPSNVSTEAWAYKQATFAAATFLYAAQEYGLATCPMEGFDQIRVRNALDIPDRYGVPVVIALGHPNPAAKPKKPSA--------RLDPTEVFFDGKFG 264 The following BLAST results are available for this feature:
BLAST of Ec-00_005230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_005230.1 ID=Ec-00_005230.1|Name=Ec-00_005230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=317bpback to top spliced messenger RNA >Ec-00_005230.1 ID=Ec-00_005230.1|Name=Ec-00_005230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2144bp|location=Sequence derived from alignment at chr_00:7960647..7966653- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. AGACAGACAGACAGAGAGAGAAGAGCTAGGACTACTCGAGATATATATATback to top protein sequence of Ec-00_005230.1 >Ec-00_005230.1 ID=Ec-00_005230.1|Name=Ec-00_005230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=317bp MFSRVVRPQEALLGRCIRKHGVAESLRCSAAMFSVRSSSPRLRQGEDANLback to top mRNA from alignment at chr_00:7960647..7966653- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_005230.1 ID=Ec-00_005230.1|Name=Ec-00_005230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6007bp|location=Sequence derived from alignment at chr_00:7960647..7966653- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:7960647..7966653- >Ec-00_005230.1 ID=Ec-00_005230.1|Name=Ec-00_005230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=951bp|location=Sequence derived from alignment at chr_00:7960647..7966653- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_005230.1' has the following synonyms
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