Ec-00_005220.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_005220.2
Unique Name	Ec-00_005220.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	457

Homology

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BLAST of Ec-00_005220.2 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 564 bits (1453), Expect = 4.300e-183
Identity = 330/386 (85.49%), Postives = 338/386 (87.56%), Query Frame = 1

Query:  184 MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSDNIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQRPLTVPDIDPHWGFDCAVGGETRSARARSSSFYEGDDADMLACINGEAPPENKLSRRSFSVTDVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAXXXXXXXXXXXXXXXXXXXXXXXXXX-MALGAVAPGRRQLGPRELQALQAGLQAPGRQISGGGDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGG--EPFCSRDGGGYWSRRRDGVADQHATEYDYREQ 1332
            MYFQPPEDRGGGGRER GSLHQAA GAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAA GAAFIALDERDSCDLGHHAP+ALDDSAAAGRAPSSDNIDLGWGAMGNAL EED +GEAEEAGEGYS AA DDAQRPLTVPDIDPHWGF CA+GGETRSARARSSSFYEGDDADMLACINGEAPP NK SRRSFSVTDVDDLL+GGGSGGGG+FSPSCDLDEMLRPTRGRTSGLTASQAAA                           MALGAVAPGRRQLGPRELQALQAGLQAPGR+ SGG DRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXX      EP CSRDGGGY SRR+DGVAD HATEYDYRE+
Sbjct:    1 MYFQPPEDRGGGGRERVGSLHQAAGGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAVGAAFIALDERDSCDLGHHAPSALDDSAAAGRAPSSDNIDLGWGAMGNALREEDEDGEAEEAGEGYSFAAADDAQRPLTVPDIDPHWGFGCAMGGETRSARARSSSFYEGDDADMLACINGEAPPANKSSRRSFSVTDVDDLLHGGGSGGGGDFSPSCDLDEMLRPTRGRTSGLTASQAAAARSAAAPVLATAAGGVDGGRLPGDGMPMALGAVAPGRRQLGPRELQALQAGLQAPGRKFSGGDDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLCSRDGGGYCSRRQDGVADHHATEYDYRER 386

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BLAST of Ec-00_005220.2 vs. uniprot
Match: D8LMP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP9_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 4.050e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1

Query:  184 MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSDNIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQR 600
            MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSDNIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQR
Sbjct:    1 MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSDNIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQR 139

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BLAST of Ec-00_005220.2 vs. uniprot
Match: D8LMQ1_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ1_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 3.540e-84
Identity = 230/231 (99.57%), Postives = 231/231 (100.00%), Query Frame = 1

Query:  739 APPENKLSRRSFSVTDVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXMALGAVAPGRRQLGPRELQALQAGLQAPGRQISGGGDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGEPFCSRDGGGYWSRRRDGVADQHATEYDYREQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPFAY 1431
            +PPENKLSRRSFSVTDVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXMALGAVAPGRRQLGPRELQALQAGLQAPGRQISGGGDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGEPFCSRDGGGYWSRRRDGVADQHATEYDYREQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPFAY
Sbjct:    3 SPPENKLSRRSFSVTDVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXMALGAVAPGRRQLGPRELQALQAGLQAPGRQISGGGDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGGEPFCSRDGGGYWSRRRDGVADQHATEYDYREQXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPFAY 233

[Close]

BLAST of Ec-00_005220.2 vs. uniprot
Match: D8LMQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ0_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.610e-25
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query:  598 RPLTVPDIDPHWGFDCAVGGETRSARARSSSFYEGDDADMLACINGEA 741
            RPLTVPDIDPHWGFDCAVGGETRSARARSSSFYEGDDADMLACINGEA
Sbjct:   28 RPLTVPDIDPHWGFDCAVGGETRSARARSSSFYEGDDADMLACINGEA 75

The following BLAST results are available for this feature:

BLAST of Ec-00_005220.2 vs. uniprot

BLAST of Ec-00_005220.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5KJK4_9PHAE	4.300e-183	85.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LMP9_ECTSI	4.050e-85	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LMQ1_ECTSI	3.540e-84	99.57	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D8LMQ0_ECTSI	2.610e-25	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:7941837..7950586 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1555
Hectar predicted targeting category	other localisation
Gene id	Ec-00_005220.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_005220	Ec-00_005220	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 7941837..7957977 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005220.2	Ec-00_005220.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 7942021..7950586 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005220.2.1	Ec-00_005220.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 7941837..7942436 +
Ec-00_005220.2.2	Ec-00_005220.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 7946672..7946812 +
Ec-00_005220.2.3	Ec-00_005220.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 7948302..7948623 +
Ec-00_005220.2.4	Ec-00_005220.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 7950095..7950586 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005220	5UTR:Ec-00_005220.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 7941837..7942020 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005220.2	CDS:Ec-00_005220.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 7942021..7942436 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:7941837..7950586+
coding sequence from alignment at chr_00:7941837..7950586+

mRNA sequence

>Ec-00_005220.2 ID=Ec-00_005220.2|Name=Ec-00_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=457bp
MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPI
SPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSD
NIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQRPLTVPDIDPHW
GFDCAVGGETRSARARSSSFYEGDDADMLACINGEAPPENKLSRRSFSVT
DVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAARSAAA
PALAAAGGVDGGRVPGGGIPMALGAVAPGRRQLGPRELQALQAGLQAPGR
QISGGGDRDLSSDSDLSSEDEDDDDDEFGTYYAGEATPQQQQQQQQEVLG
GEPFCSRDGGGYWSRRRDGVADQHATEYDYREQEEEREEGGDHLPVGGGG
SPPAAAMQQLPDPFAYASGGAGDDEVLPPHLSDGGNGGGGGMGSGVVTTS
SSSLSLX

spliced messenger RNA

>Ec-00_005220.2 ID=Ec-00_005220.2|Name=Ec-00_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1555bp|location=Sequence derived from alignment at chr_00:7941837..7950586+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CATTGTAGAGCAAGAGAAGCTGGAATAAGAAGTATTGGCCTTAACTGCAG
GCAGAAAGAGATCAATCACAGGAAGGAGACAGGGACGCCCCCCGCATCAT
CAGACCACAAAAAAACTGCAACAAGAGTAGGGGGGGGAAAGCTGCTGCAT
CGTGCCAACTGTGGCGGGTGCGCGACTGGATTAGATGTACTTCCAGCCTC
CCGAAGATCGGGGGGGTGGAGGTAGAGAACGGGCCGGATCGCTGCACCAA
GCCGCGGATGGCGCTGAATCGCCGGCGGCCGGCGGCGCCAACATCATGGG
TTCAGCGCCTGCAACTTTTTGCCCCTCGCCGATCTCACCGACGAGGCCCC
CGTCCGCCCTCGCCGCGGCGGCGGCGGGGGCGGCGTTCATTGCCTTGGAT
GAGAGGGATAGCTGCGACTTAGGCCATCATGCTCCCACCGCGCTTGACGA
CAGCGCGGCGGCGGGCCGGGCGCCTTCTTCGGACAACATTGACCTTGGGT
GGGGGGCAATGGGCAACGCCTTGATGGAGGAGGACGGGGAGGGGGAGGCG
GAGGAAGCGGGCGAGGGCTACTCCTGTGCAGCAACCGACGACGCGCAACG
GCCTTTGACGGTGCCGGACATCGATCCCCACTGGGGATTCGATTGTGCCG
TGGGGGGCGAGACGAGGTCAGCGAGGGCGCGAAGCAGCTCTTTCTACGAG
GGGGACGACGCCGACATGCTGGCGTGCATCAATGGAGAAGCTCCCCCGGA
GAATAAACTCTCCCGCCGATCTTTTTCCGTCACCGACGTGGACGACCTCT
TGTACGGCGGCGGCAGCGGCGGCGGTGGAAATTTCTCACCCTCTTGCGAC
CTCGATGAGATGTTGCGGCCAACAAGAGGCAGGACCTCAGGGCTGACGGC
TTCGCAGGCGGCGGCCGCTAGATCTGCTGCCGCACCCGCGTTGGCGGCGG
CGGGAGGGGTGGACGGGGGTAGGGTACCCGGCGGCGGGATTCCGATGGCG
CTAGGGGCTGTGGCGCCGGGGAGGCGGCAGCTTGGACCCCGCGAGCTGCA
GGCGCTTCAAGCGGGATTGCAAGCGCCCGGCCGCCAGATCAGCGGCGGTG
GCGATCGAGACTTGTCCTCGGATTCCGATTTGAGCTCGGAAGATGAAGAC
GATGACGATGACGAGTTCGGAACTTACTACGCCGGGGAGGCGACGCCGCA
ACAGCAGCAACAGCAGCAGCAGGAGGTTTTGGGGGGTGAGCCTTTCTGCT
CGAGGGACGGGGGAGGGTATTGGTCGAGGAGGCGGGACGGGGTGGCAGAC
CAACATGCTACCGAGTACGACTACCGGGAACAAGAAGAAGAACGAGAAGA
AGGCGGAGATCATCTGCCCGTGGGGGGCGGTGGTTCGCCACCGGCGGCGG
CGATGCAGCAGCTGCCGGACCCCTTCGCCTACGCCTCCGGGGGGGCGGGC
GACGACGAAGTTCTTCCCCCGCACTTGAGCGACGGCGGCAACGGCGGCGG
CGGTGGCATGGGTTCCGGAGTCGTGACGACTTCCAGCTCGTCTCTCTCTC
TGCNN

protein sequence of Ec-00_005220.2

>Ec-00_005220.2 ID=Ec-00_005220.2|Name=Ec-00_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=457bp
MYFQPPEDRGGGGRERAGSLHQAADGAESPAAGGANIMGSAPATFCPSPI
SPTRPPSALAAAAAGAAFIALDERDSCDLGHHAPTALDDSAAAGRAPSSD
NIDLGWGAMGNALMEEDGEGEAEEAGEGYSCAATDDAQRPLTVPDIDPHW
GFDCAVGGETRSARARSSSFYEGDDADMLACINGEAPPENKLSRRSFSVT
DVDDLLYGGGSGGGGNFSPSCDLDEMLRPTRGRTSGLTASQAAAARSAAA
PALAAAGGVDGGRVPGGGIPMALGAVAPGRRQLGPRELQALQAGLQAPGR
QISGGGDRDLSSDSDLSSEDEDDDDDEFGTYYAGEATPQQQQQQQQEVLG
GEPFCSRDGGGYWSRRRDGVADQHATEYDYREQEEEREEGGDHLPVGGGG
SPPAAAMQQLPDPFAYASGGAGDDEVLPPHLSDGGNGGGGGMGSGVVTTS
SSSLSLX

mRNA from alignment at chr_00:7941837..7950586+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_005220.2 ID=Ec-00_005220.2|Name=Ec-00_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8750bp|location=Sequence derived from alignment at chr_00:7941837..7950586+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CATTGTAGAGCAAGAGAAGCTGGAATAAGAAGTATTGGCCTTAACTGCAG
GCAGAAAGAGATCAATCACAGGAAGGAGACAGGGACGCCCCCCGCATCAT
CAGACCACAAAAAAACTGCAACAAGAGTAGGGGGGGGAAAGCTGCTGCAT
CGTGCCAACTGTGGCGGGTGCGCGACTGGATTAGATGTACTTCCAGCCTC
CCGAAGATCGGGGGGGTGGAGGTAGAGAACGGGCCGGATCGCTGCACCAA
GCCGCGGATGGCGCTGAATCGCCGGCGGCCGGCGGCGCCAACATCATGGG
TTCAGCGCCTGCAACTTTTTGCCCCTCGCCGATCTCACCGACGAGGCCCC
CGTCCGCCCTCGCCGCGGCGGCGGCGGGGGCGGCGTTCATTGCCTTGGAT
GAGAGGGATAGCTGCGACTTAGGCCATCATGCTCCCACCGCGCTTGACGA
CAGCGCGGCGGCGGGCCGGGCGCCTTCTTCGGACAACATTGACCTTGGGT
GGGGGGCAATGGGCAACGCCTTGATGGAGGAGGACGGGGAGGGGGAGGCG
GAGGAAGCGGGCGAGGGCTACTCCTGTGCAGCAACCGACGACGCGCAACG
GTGAGAGGACCAGGGCGCTCCGAGAGAGAGACGCGACGCATGAAACGCGC
ACGCCTCGTGTTTGACTCTCTCGCGCGGTGAATCGTGCGACGTTTTTTTG
TACGCTAACGACAACAACACCGAATCTCTCTCTCTCTTTCTCTCTCTCAG
TACATTATTTTTCTGTCGCGCGGGAGGATTCTTCCATCCTACGTTGCAAC
GCGTACGTTTGCTGGTCGCTCTCCGTTCTTTTTTGGGTGTGTTGTTGTGT
GTGTGTGTGTTTGCCCTCTGCGGCGTTGTGATGTGCGTACTGCGGTCTCT
TCCCCGGGAGTAACTCGCTGTGATCTGTGCGTCCCTACGCCTCTCCCACG
TTCACCTACTTACCCTTTCGGTAACCATCATTCCCAACACGATGAAGAAA
ACGCGGCCAATATGCTCGCTCGGTTTTTCCGACGTCATTTTTGGGGGGGA
AACAGCGCACCTACTTTCGCCGTTGTCTCTTTTCGTCTCCAAGCCCAGCA
CGTTGTTGCAAATTTGAAAATGCAGAGAACTTTACTTTTCTTTTACACCC
CCCCCGCCGCCGGAGTGTGGTTGCAGCCAGCAGTAGTCGATTGTTCAAAC
TGCTCTGCTGACGTTGTCGTGTCCAAGTCAAGTCGTGTATGGTGAACAAC
GTCGGTGCCTCGTGTTTGCTTGGGGCAGACCTCGCCCGAAGCCTGGCCAG
CGAACAAGCATGCCTACCTATGTTCGTATCGGAACAGTAGTCTTTGTAAA
GAAGCAGGAATGTATCACGCAACCACACGTGTGCTTCAATAAGTGATGAG
AGTCGTTCACTATATTTGTACCCCGTTCCAGTTCGCAATTTTCGGCCATG
GATACTTGGTGATGTTTCCCTTGTTTCAATATTACTTGGTATGAGATAGT
TTGTCAGGTCGGGGTGTTGAACCTGCAGGGACTGCAGTACGAAGTAATCC
CTAGTAACCCGGCCGGTCGTTGGTTGGTTTGATGCGATCCGAGATAACCC
GCGCCATTTTTTTAACTTGGTATCGTGTGCGCGATTAAGGAATAATAAAA
GCATACCATACACAGAAAGACTACCCATTCGAGACGATATGACACGCAAG
TTCCGATTGGTCTCCTCAAGGCTCGTGACTGATGCCCCTCTCGCATTAGG
TATTCCCAGCCGGTTTCCCTCCACTCACTGAAAAGACTCCACCACATCCC
GTTCGACTGTGGGTATATCTCGAATGGGTAGTCTTTCTGTGTGTGTTTTT
ATTATTCCTTTATTCCGAAACATGCGAACATGTTCACGTTTTGTTTGAGG
TCACCGGGTTTAATGAGAGTTTGGCTCAACACAAAGAGAGTGAGTGGCAT
CTATCTCCACAACTCCACGCCATCATGTTGTTGACGAAGGCAGCCAGCCA
ACCGGCCGACAACGAGAGAGAGAGAGGAGAGAGAAATCGGTTCACTTGTG
GGTCTACTGACGAGTTCAACGCGTTTTTCGAAGAACTACTTCCGTAAAAC
ACACACAGCAGACACCCGTTGAAATACCCCACAACGCTTTCTTGGCCAGA
TCCCGAAGATCCCGCCACACCAGCAGCAGCAGTGTCGCGAAGAAAACACA
TCAATCAAAATATAGATACAGCAGTAGTAGTAGGCTGTGTCGCTTTGGCC
CACACCTCAGGCAGTTTAAGTTCAAACGTTCACCAAGGGATTGGCAATGG
AATCAGAACCGCGGTGAATTTCACTCATGTAGCACATATGTACTTCGGAG
TACGTACATGCAAGGGAACTAAAAAACGTGAACGAACTCGCTCCCTACCG
TCGGCTGGCTATTATACCACGCTCATCGCTAACGGTGTGATCGTCGATGC
AAACGGCGGACGATTGTGTGTTTCTCCGACCCACTTGTGGACTTTGGGTG
ACACGTTCACGAGAAGTATGCTACACATGCATTGTTGTCGCGCCCGTGGG
GTGCTGTGATTTTTTTGCGTACGTACACGTGGTACCACTTAGCTGTCGGT
CATCCGTTCGAAACCGGAGCATGGCTTTCGGTGTAGTCGATGCGAAATCT
GTCGGCCTCATCGATAGTTGTCGATGGCGGTCAGCAGTCTGATATGAAAC
CTTTCTATTCGGTGCACGATGTGACGTGAAGATGATGATTGGGAGAGCCA
CCTTCGCCGGGCTACACGAGAAATGTCCCCCGTGTATGCATAGCTAACGT
CGTTCATGTCTACTGTAGGGGGTTGTTTTCCGACAATTAGAGCAAAGTCT
TCAACTCGCTGGCAGTGTAGCTGCTAGTAGCCGTTGTGTGACTCCCTCCC
CAACGAGTACTGCTGTACAGACGAAAACCAAACATCCCTGTGCCAGCAAC
CGGCTGCCAAAGCTAAGGTTGTATGCATAGTGCAACACGAGTCACCTTGA
AAAGGTCATTGTTGATTGCCACAACGTTGGTAACAACGGCTGTGGCCGGC
CTGGCAGTGGTACAGTATGCCGGGACCAACCTGTGCGACCGCAATCTACT
GCTGCGGCTCTTGGAACGGTGGTGGCATGCATACAAGTATGCATAGTTGC
TGGATGTGTTCGTCCCCTCTTCCTTTGCTACCGCTGCCATACGCTGCTGC
TATGTTCATGCTTCCATGTTGAAGGAAATGATAACTCATGACACTGCATG
GTCTCCCCTGGGGGAGTACGTGGATCACGACAAAAACCAGCGATGATGGT
TGTACCGAGCAACGCGGTTGACCTCAAAGATGAAAAGCATGCCTGGTACA
TAATGGTGGACGGTGGTGGCTGCTGTTGTTGTGTGCTGTTGATGTATACA
TAGGGAGCAAAACAAAACGAGATTTCCAGGTTGAACATTACGACGGAACG
ACGTTTGTCGCGTTCCTTCTCCATGTCTAGCATCGTTCTCTTCAGTCTCT
CACAAAGCGCAGCGGTTGAGCTCTTCAGAGCGATTCTGTGTGAAAGAGCA
CGCTTAGCGCGGTGGCAAGGGCGGGAGCACGGCAGCGGGCCACGCGTGCT
GCTGTGAAAACATGAAAAACTAGCACCACTTTTTGCTGACGAGGTGCAGA
ATCTCAGAGCCGAGCGGTTTAAGCTATGAAAAAAGTTCTTGGTGCGTATA
CAGGGAGAATGCGGCCCTTTGCGTGGTACCCAGTAATCTGCTGTGATGTG
TGCGATACATGCCTGCGGTGGCGGTTAGGTGTGTGAGTTGGGAAGGATGT
GCAGATCGTGTCGTGTTGTAATGGAATTGTTGTTGCCTTCGCTTCACAAT
CGCATAGACAAATATGGAATTGACGTGCCGCACTGAAATGAAACATCGAA
CGAACATGTTTCGGCGTGACTCCCGGTTGTTCCTAAACGATGGGTTGCCA
GAAGAGTCAAGAGACGGTACGGACGTGTACAGACACCGTTGCCGCCGTGT
ATGGGGTGCATTTGAGAGGAGGGCAAGGGTATGAACTGCGTTGTGGCGGC
TTCCAATGGTTGTGTCAGTTCGTCCGTGCCGGATATTGTGTGACGACGGC
ACGTGTGCCGTGTGTCCGTCCGCCGCAGGTTCAAGTTTAATGCGAACCCT
AGTTCGAAATAGCTCGAACGGCTAGTCTTTCTGTGAGGTTATATTTACTT
AAAAAAAAAAAAGGACTTTTGAAGTTCGGGGGGAAGTAAGCAAATTCGAA
AATGCAGAACAGCGAGCGTATATATATCTAGTCCTACTTCGTATGTCTCC
TTTCGCCTGCAGAATTAATAGGGAAGGGCTGAAGCTTAACTTGTTTCGAT
GCCGGTTCTAAAACATCAAGAGAGAGAGGGAGAACGAACAACAACAGCAG
TGTTAGAGGTTGACCATCCAAATCATGATGCTGCAGGGAAGCCGCCAAAG
CCTGAGCGGTGTTAGTCTTAGCAGTCGGTTCGCCTCGTCCGCCTTCAGTG
GTTCAAGGTTACGTGCGTAGTCCGCTCATCCTCCTCGGCGCGGCCTCTTG
GGTTCAGCGGGACTACCTACAGCTCATTTCCTGCTGCTGTGTAAGCCTTA
ACCCCCGACATTGCACAGATTCCATGCTTGATCCAGCATGTTTGCTTGAG
ATAGAAAGTGCGTGGGTTGCTATTTATGGTTCGGCATGTCGCACTCTTTG
TGCACACTCAACAGAACAAATCCGCCTGGCCCCCACCGCGCCCGTCAACA
CGAGCAGCAACAACAGCATGAAGTGCCAATAAAGCTCTAACCCGTGTTTG
CCCGCGTCCTTGCTGTCGCGCCTTCTGTACGGCAGGCCTTTGACGGTGCC
GGACATCGATCCCCACTGGGGATTCGATTGTGCCGTGGGGGGCGAGACGA
GGTCAGCGAGGGCGCGAAGCAGCTCTTTCTACGAGGGGGACGACGCCGAC
ATGCTGGCGTGCATCAATGGAGAAGCGTGAGTTTTAATTGTCCATCCTGC
AGCCGCAGAACGACCCGTTTTTTTCTTTTTTTTCTTTTTATGTCAAAGAG
GGAGTCGTTTTGAGGGCGCTGGGTGAAGAAAGAAACGTTATTTTTCGCCC
CACTGACTGCAAAGGCTTTTCAACACACCGACTACTGCTGTGGTGTTATA
ATAGTGTTATGTCGAACGGATACAATGTATCTAGCCTTTCTGTGGTTATG
TGTAATTTTCAATTTTCGTAGAAGCGTCGAGGGTAGTTGGCTTTGCTTGG
GTGTTGTGGTACGGCGGTTTGTAACAACAGCCGCAGGAGAAGCAGGGGCA
CAAGGAGAAGCAGGGGCACAAGGAGAAGCAGCAGCTCACTTGCCGTAGTG
TATTCTTGGCTGCTTGGGGTGTTACTCAGAAGACGGGATGCATGATCACT
GCGTACGATGAAGGGAGGTATTTTGGCAAGAATGAAAAGAAAATAGAAGG
TAGCTGTAGGTAAGTGCGTGCTTACAGAACAAGACCCACGCAAGCAGCAA
GCAGCCTCTATTGGTACAGTCTTGGTTGGGTTTAGCGGTCCTTTGTGTGA
GAAAGTATCATAATATGAAAGCCGCTGTTGATGGCATCGCCACAAAACCG
GATTGGCAGTTATATAGAAGTAGTTTTGACTACCGAGGTGCAGCCGTGCC
AAGAGATTTTGGAACCGCTATTCAGGGCATTTCGCTAAATAGGGAACCGC
GAAACCGGGACCACGAACTGTATGGAAGATGATGAGAATTGCCGAGCATT
GAACAGACATACGACAAGCGGGGCATGTGGCAGGAGCGTTTTCTGTCAAC
GTGAGTCGAGATGTAATTGTTTTTGTTGGGTACATGTCTGTCTTGAGGAT
GTGGCTCTGTGCGTAGTATGTAGCCCGCTTCGCCCAAAGGTTGTCACGTT
CGACTGGGGATGCAAACCACCCTGCCCTGACGCTGTTATTACCGCACTTG
TTAGTTAGAAAGCTTGTAGAGGGGGGGACGACTTTGCCTGACCCTCGCCA
TAAAGCTCAGCCATCCACACCATATTTTCCTTGGAGAACCATGGATGGAG
GTCCACAATTTAATGGCAATAGTCGTCCTACTGCTGTAAGAAGACGGCGG
TAAACAATATTAACGCACAGACTAAGACGGAGCGGGGGGCGGGTTGGTGT
CAGGCTGGCGAGCAAGCGTGGAGCAATGCTGCATTTTTTTTGCATTTTTA
CGACACCTGTCCTCCCGTTTTCTCTTGCATGACAACAACGGTTGTACTGG
TGGCTCTCTCTTTCCTCGTATCCCTCACGCGCTATACCTCGGCCGGAATC
TCTCTCGCTCTCCCTCGCTCTCTCGCTCTCTCTCTTTCTCTCTCTCTATT
CCGCTCTCTCTCTCTCTTGCTCTCTCTCTCCCTCCTTCTCCCTGCCCCAT
GCCCCTACCCGCACGCTCTTTCACCCCCCTCCGCCCGGTTGCAAAACGCC
TCGTCGCATGCTCAGTCCCCCGGAGAATAAACTCTCCCGCCGATCTTTTT
CCGTCACCGACGTGGACGACCTCTTGTACGGCGGCGGCAGCGGCGGCGGT
GGAAATTTCTCACCCTCTTGCGACCTCGATGAGATGTTGCGGCCAACAAG
AGGCAGGACCTCAGGGCTGACGGCTTCGCAGGCGGCGGCCGCTAGATCTG
CTGCCGCACCCGCGTTGGCGGCGGCGGGAGGGGTGGACGGGGGTAGGGTA
CCCGGCGGCGGGATTCCGATGGCGCTAGGGGCTGTGGCGCCGGGGAGGCG
GCAGCTTGGACCCCGCGAGCTGCAGGCGCTTCAAGCGGTGAGGTTGCAGG
GGGAAAGAGAGAGGGGGGGGGGGGGGGCACCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTCTTGGAAAGGTTTTTTGCCTTTTTGG
TTTTTTTTTTTTGCCCCAGGGGGGGGGGGGGGGGGTGTACTCATAGTCGT
GCATGCCGTAGTCGTTTGACCATTGACCTCGCATCCCTACAAAGCCGGGA
CGGAGCACGCCGGGTTCTCACCGGACCAGGTTCTCACATCACCAAGCGCG
AAGCGCCGTGAGGTATTTGGCGAGTCGCATGAAGGGTGAGCTGCATCCTG
CTAAGGGTGTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGC
TACGTATGACTTAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTG
TAAGCACTGTGTAACTGCCTCGAGGAAGCTTGACCATTTTAACACAACGT
GGTGCGATCATCCCCCGTTGCGCGGAGTGAGGTTTCTCGACCCCGCACAA
CATGATCTACTCGGCTACCATTATGGTTACCGCCAAAAAAAAAAACAGAG
GTAAAAAAAAAAAACGGCAACCTGGTTGCCGAGTTCACGAAGTGAATTGG
CTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAATCCCGATGGCA
AACACCGAGTGGGGGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAA
CCCAAACCCTGATGGCAAAGCGGCCGGGGGGGGGGGAGAAAGACAAAGAC
ATACAGACCCTTCGATGAGTTTGGATGCTTGTCCGCGTTTCTTTGTCCTG
TATTAGACTGGCGTGTTTTCATTGGTCAGCCGGTTAGCGGTCGATGCTAG
CTTCGAAGAAAACACAACACAGGACAGACACACTGGTTTGTATTTCGGTA
GGCGCCCCTTTCACGATGAAGTTACTTTACTACCCAGTACCTTCATGTGC
ACCACGTCCGCCTTCCTCCCGGCCCGTGTCCATCAACCCTGCGGTAGACG
TTGTGCCTTCGCGCCACTGCTTGTGATGTTGTGATGTTGTGATATTTTTT
GTCTCTCGTCCAGCGTGCGCAACATCTTGGAGTGTATTTTTGTTGTGGGC
GCGAGCAAATGCTACTGTGTGTGTTTGGGATTATTTCCAGTTGGAAGACA
GCGTGGGTTGTGTTTTTTCCGACTAATATCAACACCTTTTTCTGCGTATT
TTTGCCCCGCCTTGTGTTCCGCGCTCTCGGCGCTCTCTTTCTCTCTCTTT
CGACCCAGGGATTGCAAGCGCCCGGCCGCCAGATCAGCGGCGGTGGCGAT
CGAGACTTGTCCTCGGATTCCGATTTGAGCTCGGAAGATGAAGACGATGA
CGATGACGAGTTCGGAACTTACTACGCCGGGGAGGCGACGCCGCAACAGC
AGCAACAGCAGCAGCAGGAGGTTTTGGGGGGTGAGCCTTTCTGCTCGAGG
GACGGGGGAGGGTATTGGTCGAGGAGGCGGGACGGGGTGGCAGACCAACA
TGCTACCGAGTACGACTACCGGGAACAAGAAGAAGAACGAGAAGAAGGCG
GAGATCATCTGCCCGTGGGGGGCGGTGGTTCGCCACCGGCGGCGGCGATG
CAGCAGCTGCCGGACCCCTTCGCCTACGCCTCCGGGGGGGCGGGCGACGA
CGAAGTTCTTCCCCCGCACTTGAGCGACGGCGGCAACGGCGGCGGCGGTG
GCATGGGTTCCGGAGTCGTGACGACTTCCAGCTCGTCTCTCTCTCTGCNN

Coding sequence (CDS) from alignment at chr_00:7941837..7950586+

>Ec-00_005220.2 ID=Ec-00_005220.2|Name=Ec-00_005220.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1371bp|location=Sequence derived from alignment at chr_00:7941837..7950586+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTACTTCCAGCCTCCCGAAGATCGGGGGGGTGGAGGTAGAGAACGGGC
CGGATCGCTGCACCAAGCCGCGGATGGCGCTGAATCGCCGGCGGCCGGCG
GCGCCAACATCATGGGTTCAGCGCCTGCAACTTTTTGCCCCTCGCCGATC
TCACCGACGAGGCCCCCGTCCGCCCTCGCCGCGGCGGCGGCGGGGGCGGC
GTTCATTGCCTTGGATGAGAGGGATAGCTGCGACTTAGGCCATCATGCTC
CCACCGCGCTTGACGACAGCGCGGCGGCGGGCCGGGCGCCTTCTTCGGAC
AACATTGACCTTGGGTGGGGGGCAATGGGCAACGCCTTGATGGAGGAGGA
CGGGGAGGGGGAGGCGGAGGAAGCGGGCGAGGGCTACTCCTGTGCAGCAA
CCGACGACGCGCAACGGCCTTTGACGGTGCCGGACATCGATCCCCACTGG
GGATTCGATTGTGCCGTGGGGGGCGAGACGAGGTCAGCGAGGGCGCGAAG
CAGCTCTTTCTACGAGGGGGACGACGCCGACATGCTGGCGTGCATCAATG
GAGAAGCTCCCCCGGAGAATAAACTCTCCCGCCGATCTTTTTCCGTCACC
GACGTGGACGACCTCTTGTACGGCGGCGGCAGCGGCGGCGGTGGAAATTT
CTCACCCTCTTGCGACCTCGATGAGATGTTGCGGCCAACAAGAGGCAGGA
CCTCAGGGCTGACGGCTTCGCAGGCGGCGGCCGCTAGATCTGCTGCCGCA
CCCGCGTTGGCGGCGGCGGGAGGGGTGGACGGGGGTAGGGTACCCGGCGG
CGGGATTCCGATGGCGCTAGGGGCTGTGGCGCCGGGGAGGCGGCAGCTTG
GACCCCGCGAGCTGCAGGCGCTTCAAGCGGGATTGCAAGCGCCCGGCCGC
CAGATCAGCGGCGGTGGCGATCGAGACTTGTCCTCGGATTCCGATTTGAG
CTCGGAAGATGAAGACGATGACGATGACGAGTTCGGAACTTACTACGCCG
GGGAGGCGACGCCGCAACAGCAGCAACAGCAGCAGCAGGAGGTTTTGGGG
GGTGAGCCTTTCTGCTCGAGGGACGGGGGAGGGTATTGGTCGAGGAGGCG
GGACGGGGTGGCAGACCAACATGCTACCGAGTACGACTACCGGGAACAAG
AAGAAGAACGAGAAGAAGGCGGAGATCATCTGCCCGTGGGGGGCGGTGGT
TCGCCACCGGCGGCGGCGATGCAGCAGCTGCCGGACCCCTTCGCCTACGC
CTCCGGGGGGGCGGGCGACGACGAAGTTCTTCCCCCGCACTTGAGCGACG
GCGGCAACGGCGGCGGCGGTGGCATGGGTTCCGGAGTCGTGACGACTTCC
AGCTCGTCTCTCTCTCTGCNN

Synonyms

The feature 'Ec-00_005220.2' has the following synonyms


Synonym
Esi0409_0017
Esi_0409_0017