Ec-00_005180.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005180.2
Unique NameEc-00_005180.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length874
Homology
BLAST of Ec-00_005180.2 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI)

HSP 1 Score: 1337 bits (3460), Expect = 0.000e+0
Identity = 800/800 (100.00%), Postives = 800/800 (100.00%), Query Frame = 1
Query:  403 NDCESNDPNSLDNNNQDAGAAATATDNAVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD 2802
            NDCESNDPNSLDNNNQDAGAAATATDNAVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD
Sbjct:    8 NDCESNDPNSLDNNNQDAGAAATATDNAVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD 807          
BLAST of Ec-00_005180.2 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE)

HSP 1 Score: 916 bits (2368), Expect = 1.470e-308
Identity = 596/851 (70.04%), Postives = 631/851 (74.15%), Query Frame = 1
Query:  412 ESNDPNSLDNNNQDAGAAATATDNAVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFP------------KPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAV--------------------------------------GGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGND-AAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXX---TCSYLTWLESRSDFNHWPSPSSDDDDNAASD 2802
            ESNDPN L+NNNQDAGAAATATDNAVNAA PRT+RKNPEK DD  RCPICQDLLPEENRGI+KCGHVFCLKCVLQWVKKQQNSCPTCRA+VCHIK+TLS AEALEKNA+RKP  KAQLKR KRKS +GKP P            KPDITTEKIRV KKVSREQIRQNA APHPQAPGGFLHAQEQ EAAAEAAQA+PDAQ DQVEAIV++QVA AVFSSSP    ATPQVPSPLPPSSP SLATDLEDRRVAIEADRRAL ESTSAFRGHRSVGGGSY+GGAGGARSI DSGGGVG  VGEASLD+RVE++S                                                 GGRGWRST NI NSSSGV S G          XXXXXR          XXXXXXXXXXX                 XXXXXXG GD +GNITTLGHLLSVLGS R+RVSPNG                                                   ATDPETRSAAQAAMA SRAASRYTSL PEQALAVQGLAAL+SSPTLRQLRAVARLVVGGSASAGMAGAPA+ASVSRR+QPQ GLGQES + RDD+AGV GR DGGKSN EERG+LLPRID+DDNRS N+S RGGGNG+EEEPC+EP +RRTA  E DVSHTE+ DE+ F GRNDN TTAG TTGSAS ILSDSSA VAC S TSIPES AH SGND AAPSGSINDG NTAVAGAE+A GGDA+GAGVAGS HAGGGISVS  GAAGPGGVAINSGRV SSPL++ XXXXXXX   TCSYLTWLE+RSDFNHWP PSS DDD+ ASD
Sbjct:   35 ESNDPNCLNNNNQDAGAAATATDNAVNAARPRTRRKNPEKDDDGDRCPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSAEALEKNADRKPPRKAQLKRAKRKSAVGKPSPGDRYSESDVLQQKPDITTEKIRVRKKVSREQIRQNATAPHPQAPGGFLHAQEQTEAAAEAAQAMPDAQQDQVEAIVNRQVAFAVFSSSPSPPPATPQVPSPLPPSSPHSLATDLEDRRVAIEADRRALFESTSAFRGHRSVGGGSYLGGAGGARSIDDSGGGVGVSVGEASLDMRVESDSGGGGDVGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGWRSTANIDNSSSGVGS-GNRDADDSNSRXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXGRGDRIGNITTLGHLLSVLGSGRMRVSPNG---------------------------------------------------ATDPETRSAAQAAMAASRAASRYTSLAPEQALAVQGLAALKSSPTLRQLRAVARLVVGGSASAGMAGAPAVASVSRRQQPQHGLGQESGRYRDDDAGVSGRGDGGKSNSEERGSLLPRIDSDDNRSINVSGRGGGNGAEEEPCIEPVARRTAAVEGDVSHTEDGDEYTFLGRNDNKTTAGETTGSASSILSDSSAAVACSSPTSIPESSAHPSGNDVAAPSGSINDGTNTAVAGAENAYGGDANGAGVAGSGHAGGGISVSTIGAAGPGGVAINSGRVQSSPLNNXXXXXXXXXXXTCSYLTWLEARSDFNHWPWPSSSDDDDGASD 832          
BLAST of Ec-00_005180.2 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 7.470e-16
Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 1
Query:  550 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLA-EALEKNANRKPLT---------KAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQ 930
            C IC D LP   RG++ CGHVFC  C+ QW K   + CP CR ++  I KTLS A EA  K   RKP+          + QLKR + + +  K  P     T+ +RV  K  +    Q   APHPQA GG+++ QEQ
Sbjct:  176 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKKPRKQLKRARHRDSRAK-NPASGFVTKTVRVRPKSLKMTPAQQRAAPHPQARGGWMYVQEQ 310          
BLAST of Ec-00_005180.2 vs. uniprot
Match: D8LMP4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP4_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.340e-14
Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  550 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKP------LTKAQLKRTKRK--------STIGKPFPKPDITTEKIRVHKKVS-REQIRQNAMAPHPQ 897
            CPICQ LLP+E RGI++C HVFC KC+ +W K + ++CP CR +V  I KTLSL E  + N  R P       TKAQ+KR + K        S +      P   T+ +RV  +   +E  R  A APHPQ
Sbjct:   41 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTE-SACPVCRVEVRSITKTLSLREIEQFNV-RTPHDPSQVRTKAQIKRARAKRFKCRKPASVVFDDIYIPFTVTKAVRVKLRTQMKEMNRLLADAPHPQ 169          
BLAST of Ec-00_005180.2 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 5.460e-14
Identity = 59/173 (34.10%), Postives = 77/173 (44.51%), Query Frame = 1
Query:  550 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLA-EALEKNANRKPLTKA---------------------------------------------QLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQ 930
            C IC D LP+  RG++ CGHVFC  C+ QW K   + CP CR ++  I KTLS A EA  K   RKP++ A                                             QLKR +R+ +  K  P     T+ +RV  K  +    Q   APHPQAPGG+++ QEQ
Sbjct:   80 CAICCDKLPDLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKSKGETRKPVSLAVTRQRGWRSLFLPVERAFRLCLFARFLGPLFLVVSQRGMKKKVRKQLKRARRRDSRAK-NPAAGFVTKTVRVRPKSLKMTPAQQRAAPHPQAPGGWMYVQEQ 250          
BLAST of Ec-00_005180.2 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.070e-8
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 1
Query:  487 VNAAHPRTKRKNPEKVDDKAR----CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNS--CPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQA 933
            + A HP    +  +   D A+    C ICQ+ LP+  RGI+ CGH FC  C+  W  +  +S  CP+CR     IKKTLS  +               +++ K ++ + K F K       IRV K   +++  + A   HP A GG ++A +QA
Sbjct:   33 IPAPHPEDVERTKKAAADDAKKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKD---------------VEKEKLRNEVDKIFVKD------IRVRKMSKKKKAIEEARTLHPDAAGGSMNAGQQA 166          
The following BLAST results are available for this feature:
BLAST of Ec-00_005180.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMP5_ECTSI0.000e+0100.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQU9_9PHAE1.470e-30870.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGV7_ECTSI7.470e-1640.88Similar to PHD finger family protein, partial n=1 ... [more]
D8LMP4_ECTSI1.340e-1442.75RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2A7_9PHAE5.460e-1434.10RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE1.070e-831.61RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:7884297..7896365 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1356.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LMP5
Length6049
Hectar predicted targeting categoryother localisation
Gene idEc-00_005180.2
EggNOG free text desc.RING-type zinc-finger
EggNOG OGs2D0HG@1,2SE7A@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180Ec-00_005180Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 7884297..7896365 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.2.1Ec-00_005180.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7884297..7884366 +
Ec-00_005180.2.2Ec-00_005180.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7885686..7886008 +
Ec-00_005180.2.3Ec-00_005180.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7886872..7886958 +
Ec-00_005180.2.4Ec-00_005180.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7887319..7887443 +
Ec-00_005180.2.5Ec-00_005180.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7888335..7888463 +
Ec-00_005180.2.6Ec-00_005180.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7889033..7889107 +
Ec-00_005180.2.7Ec-00_005180.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7889753..7889842 +
Ec-00_005180.2.8Ec-00_005180.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7890518..7890604 +
Ec-00_005180.2.9Ec-00_005180.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7890855..7892178 +
Ec-00_005180.2.10Ec-00_005180.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7892314..7892375 +
Ec-00_005180.2.11Ec-00_005180.2.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7892689..7896365 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0051805UTR:Ec-00_005180.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 7884297..7884366 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.2CDS:Ec-00_005180.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 7885801..7886008 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0051803UTR:Ec-00_005180.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 7893124..7896365 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.2Ec-00_005180.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 7885801..7893123 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005180.2 ID=Ec-00_005180.2|Name=Ec-00_005180.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=874bp
MDPLRRTGGRDDEPRSHLVDPGYCKYYPGTAPTPYPSKITRTYPAPTLLA
QRQQQQQQQQQQHNALANEDGDSNDCESNDPNSLDNNNQDAGAAATATDN
AVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVL
QWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRK
STIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQA
EAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPPPPPATPQVPSPLPP
SSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGAR
SIGDSGGGVGDRVGEASLDVRVENNSGGGGGGGGGAVGGRGWRSTVNIGN
SSSGVSSDGGGDGSGNSDADNSNSRNNAGVRTGGAAEAAAQESSSNRDVQ
GAATSSGGDNLDHDDDDDDGTGDGVGNITTLGHLLSVLGSRRIRVSPNGG
IGGIDDGGGGGGIAAAAPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNP
ATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLR
AVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFG
RRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRR
TAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACG
SSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGS
DHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNNNNNNNNTCSYLTWL
ESRSDFNHWPSPSSDDDDNAASD*
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spliced messenger RNA

>Ec-00_005180.2 ID=Ec-00_005180.2|Name=Ec-00_005180.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6049bp|location=Sequence derived from alignment at chr_00:7884297..7896365+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATCAGAACCAACGATAACTTGGCGGGCGCAGCCTTCGTCACTCTCTCTGG
CTCGCGTTCAGAGACAGCAGGACGGTGGAGCCTCGTCCCCGGTCAAGGAC
CCGAGAAGACATACCACCACCGACGTCAAGAACGACACAGCTTCACCGCT
TCCTCTCAGTCGCCGAGCACTCAAACATCTACCACATGGACCCTCTGAGG
CGGACGGGAGGAAGAGACGATGAACCCAGGTCTCACCTGGTCGATCCCGG
CTACTGCAAGTACTACCCTGGCACCGCGCCGACGCCGTACCCGTCAAAGA
TCACCAGGACCTACCCCGCACCAACTTTGCTGGCCCAGCGGCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCATAATGCGCTAGCAAACGAAGACGGCGA
CAGTAACGACTGCGAAAGCAACGATCCAAACAGCCTTGACAACAACAACC
AGGACGCCGGAGCTGCCGCAACGGCAACAGATAATGCCGTCAACGCGGCC
CATCCGAGGACGAAGCGGAAGAACCCTGAAAAGGTCGATGATAAGGCCCG
CTGCCCGATTTGCCAGGACCTCCTGCCGGAGGAAAACAGAGGCATCGTGA
AATGTGGACACGTGTTCTGCTTGAAATGCGTTCTCCAGTGGGTCAAGAAG
CAGCAGAACAGCTGCCCAACATGCCGCGCGAAGGTGTGCCACATCAAGAA
GACGCTCAGCTTGGCGGAGGCCCTAGAAAAGAATGCTAACCGGAAACCTC
TGACGAAAGCCCAGCTGAAGAGGACGAAGAGGAAGTCTACTATCGGCAAG
CCCTTCCCGAAGCCCGACATCACGACCGAGAAGATTCGCGTCCACAAGAA
GGTTAGCCGGGAACAAATCAGGCAGAACGCCATGGCGCCACACCCTCAGG
CGCCAGGGGGGTTCCTGCACGCGCAGGAGCAGGCGGAGGCGGCAGCGGAA
GCGGCACAGGCGGTGCCTGACGCACAGCCAGACCAGGTGGAAGCCATCGT
GGACCAACAGGTAGCCATCGCGGTGTTCTCGAGTTCCCCCCCCCCTCCCC
CTGCTACCCCGCAAGTTCCCTCGCCCCTGCCGCCGTCGTCGCCGCGTTCT
CTTGCGACGGACCTTGAAGACCGGCGGGTAGCGATCGAGGCCGACCGCCG
GGCGTTGTTGGAGTCTACCTCAGCTTTCAGGGGGCACCGCAGCGTCGGCG
GGGGGTCCTACGTTGGAGGAGCCGGGGGGGCGAGGTCGATTGGTGACAGC
GGAGGCGGGGTCGGTGACCGTGTCGGCGAGGCAAGCCTTGACGTGAGAGT
GGAAAACAACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGTCGGTG
GTCGCGGATGGAGATCGACTGTGAACATAGGCAACAGCAGCAGCGGCGTC
AGCAGCGACGGGGGTGGGGATGGCTCTGGAAACAGTGACGCGGACAACAG
CAACAGCAGGAACAACGCCGGCGTGCGCACCGGCGGGGCGGCAGAAGCCG
CGGCCCAAGAATCTAGCTCGAATCGTGACGTGCAAGGAGCAGCGACATCG
AGCGGCGGAGACAACCTCGACCATGACGACGACGACGACGATGGTACGGG
TGACGGCGTCGGCAACATCACCACGCTCGGGCACTTGCTGTCGGTCTTGG
GCAGCCGTAGGATAAGGGTGTCACCAAACGGTGGTATTGGTGGTATTGAT
GATGGTGGTGGTGGTGGTGGTATTGCAGCCGCCGCCCCTAGCTCTGTCCC
GTGCTCACCGCTCCTGCCCTCATACAGCAGGCGTAGCAACAACAACAAAA
GCATTAGCAATAGCAGCCACGGCGTCGGGAACCCAGCCACCGACCCGGAA
ACCAGAAGTGCGGCGCAGGCGGCCATGGCAGTCTCTCGAGCGGCGTCTCG
GTACACCTCGCTGGTGCCAGAGCAAGCGTTGGCAGTGCAGGGACTGGCAG
CCCTCGAGTCATCGCCGACGCTGCGGCAGCTGCGCGCGGTCGCCAGGCTT
GTGGTCGGCGGCAGCGCCTCAGCTGGGATGGCAGGTGCTCCGGCTCTGGC
AAGCGTGTCACGGAGACGGCAACCGCAAGACGGGTTAGGACAAGAGAGCA
GACAAGACCGGGACGACGAAGCAGGCGTGTTTGGGAGGCGAGACGGCGGG
AAAAGCAACGGCGAGGAACGGGGTAACTTGCTTCCAAGGATCGACAACGA
CGACAACCGCAGCGACAACATCAGCAGCAGAGGCGGCGGCAACGGGTCTG
AGGAAGAGCCCTGTGTCGAACCCGCCTCTCGACGCACAGCGGTGGGGGAG
AGGGACGTCAGCCACACGGAAGAGCGCGACGAGTTCGCGTTTCCAGGAAG
GAACGACAACGACACTACTGCGGGAGGAACCACCGGCTCGGCTTCTCCCA
TCCTCAGCGACTCTTCGGCTACCGTTGCCTGCGGCTCTTCGACGTCCATC
CCCGAAAGCTTTGCGCACACATCCGGCAATGACGCTGCCCCCAGCGGCTC
CATCAACGACGGCGCAAACACTGCTGTTGCCGGCGCTGAAGATGCCTGTG
GTGGCGACGCCGATGGTGCCGGGGTAGCAGGTAGTGACCATGCTGGTGGA
GGTATCAGTGTTAGCGCGAATGGCGCTGCAGGACCTGGTGGAGTTGCGAT
CAACTCCGGCAGGGTCCACTCGAGCCCCCTCAGCAGCAACAACAACAATA
ACAACAACAACACCTGCAGCTACCTGACGTGGCTAGAATCTAGGTCGGAC
TTCAACCATTGGCCATCGCCGTCGTCGGACGACGACGACAACGCCGCCTC
CGATTGAGGCCCCAACGACACGCACCTCGGTACCGCGACCCGCCCAGGAG
GACCCAGATGTCTTCGTCACGACCATCCTCGTCAATCAGTGTTCACGAGC
ACCCCCAATGCGGCAGCCACGGTTGCCTCTGCGGCGGCGTGGGCTGTGGT
GGGCTCTGCTGCCGGAGCGGCTAGCGATAACGACGACCCGTCGTTGGTTG
GAACGGTGCACGACCGTCCCGAGGTTCGGGAGGATCTTCGCCAGCCCAAG
CGCTCGCGGCGCTCGAGGGAAGTGTCCCGGGTATGGACTTTTCCGCTGGG
GCTGGGGGGGTGGTAGTGTTTCCACCGTGATGCCGAGGTCAGAAGCGAGT
CTTGATCGTGATGACGGCCTCTGGAGACACAAAACCATCATGAGAACCGA
AGAAGTTTCGCAACAGTGGCGAGGAGGTGCGCAATAGAGTCCTTGTGGCT
TGGTGCGCGGGGATGTGTCAAGACGGTGGGGTCAGGGCTCGCGCGGTTTC
TCTTCCGACTGTCATAGGGAGAGTTCTGCTGAAACGTCAATCAGGCGGAT
CAGTTCAGTAGGTGCCGGCATCGAGAGTGGCTGCCTTTCCCCAGCCTGTC
TTTTTTTGATACTTGGTTCAAACTTAACTACTGCTGTACTGTTGTCCATT
AGAGTCGAAGTGCGCGGTCAAGAAAGAAGAGGCGAAATCGCCCTCCCTCT
GGTGTTCGTGCTCAATCAGCCCTCGGCACTGGGGTACTTCGACAAAGTTG
ATACAGTTAAGAGCTACAAGATGTCGTGTGGCAGCAGAGAGGAGAATCAT
GGTGTGGACGCCCCTACCATCAGGTCTCTTTTGTGCTCGTTCTTTGATTT
CAGCTGCCAGGATGGATGGGGAACCACCAAAAGGGGCGGAGGAAAGCTCA
CTCAGTATTGGGGGCGAGGGCGGGCGGGGTGCAACGACGCCGACCGATAA
TCTTGGGGGGATTTGGCGTTCAGTTGAAAACCACCCCCCGACAGCCTGTG
GAAGGCAAAGAAGGGTGTGGTGTGATGAGAGTGGTGTGACGAGTGGGTGT
GAAGGGTGGGTGTGAGCATTGTGTGCGGGGGGAGGGTTGCTGACAATACA
GGTTAGCGCTTCTTCGTTCGTTGCTCAGGCGATGCTATACGGGTATGGTA
TGCGAGCGAGAAAGCTCTGGGCATCGTGGGATACAGTCGGGCCCGATGCA
TGAGGTCGACGCTACCTCGAGGGGTCTTCGTCGAAATCCTTTGTGGGGGT
GAAGTCGATTTACTGTAGTTGGTGGACTTGAGGTTACTAGGTTAACACGC
GGGCGGTACCCGAACAACAGACGCAGGAGATTTTTTCGACACTTGCGCGC
CAGCTGCTACAATTCAGTGTTGAACGGGAGTTGCATACTGCTAGATGCTC
TCTTGTTTAGACTGAAAAGCTCTTGCGGGGGGGGGGGGCGCCCTCTCTTG
CCCGTGATTCGCGCATGCAATTTAGCGTAAAGAGAGGTGGAGCTTCTTAC
GATTGAACGAGGCGGGGGCAGTGTTGGGGTGCAATGTGAACGCCGCTGGG
AGCACGGAGACGCTTAGTATCATGATGGCCTCGCTTCGCGTTTTGTTTGC
ATGCATCCGATGGTTTCATCGTTTGTTCTGAGGAAAGCAAGAAAAACATC
GTAAACATTCTCTGCCAAAAACAAGAAGTCAGGTCCTATCGCTGCGGCAA
TAAGGGGCTGAGTCTTGCTCACAAGAGGGGTTTCTTGCGAGCGGGTCGCG
ACACTGTATGAATAGTGGTAGGACTGAAGGCCGCGTTTCTAACAGGGGAA
ACTTAAAAGTGTGACGACGGAAAACGCAGCAACAAGCGAAACGAGATAAC
ACAGGGCATGTGGGTGCCAGCGGAATTTCACCAATAGTGCCCCTGCCACC
TACTGGAAGGTAATCAAGTATTCCCTCTCCCACTCGTTTCGGATCGACGA
GCGAGCTGGCAGGCGTACTGCTGCTTGCTCCACCCCAACGATGCACGCTG
GCTTTGGCCTGTCGACTTCTCTGTACGGGGGGAAATCACCGCGAAAATAT
GCCCTTCAGCGACGACGCTGGGACCAAGGGTCGTAAGACCGTGTACTCCT
GGATTCTAGACATGAAGCTGTTTTGTTTTAGCACGAAAAGAATCATTCGT
AATTAGCGGCATGTATGCAAAGTTAAGATGTGAAAATACCAAGAAGATCG
GTTCACCAAGAACCGGGGAATGAGAAATGAAGAAAGGCAGGGCAAAGCGC
ACCTCCAACTTAACAGAAAAACAAAACGTTCGAGTCTGAACAACATTAGC
CTTTCAATTTCGCATGCCATCGGTGCACCGTCGTCGTAAGTAAATCATTG
ACCACGAGGAATTAAGACTTGCCCATAAAAGTACCGTCAATATGTAATAG
AGCACGCGATAGTACCGTCCTAATCGAGGTTGATGAGACAGCAATGATGG
ACATCGAACCTCCACCCCACACGCCGCGCACACCTCTCTCCGACAAAACG
AAATTATGCGTGCTACGGTACTCATACGCGCACGTGACAGGGGTCGTTTC
CCTGGAAGCAAGCCACCCAACCATGCCCGCAACCCCCACCTCTCGCTAGC
CGTCAAGCACCCGACAAAAACGCAAGCGGTGAGCGCACAACAATCAAAAC
AAGTACCCCCCCCCCGGCGCCCCCCGCCACCAAAATACAAGGAAGAACTG
GGGAGCCAACAGAGGCGGAATAGATTCAGCACGAATCCATATAACAAAAA
AACACTACCCCCACCCATCACCAAAACACAAAGAAAACTCGGGGAGCCAA
CAGAGGCACCCCCCCACCCACCCAAATGCATCGGAAAACTCGGGCAGGGA
TTCCGCGCCTCAAGACCGGTGCTGCTACGTTTACCACCGACGCCACACAC
AGGTACCTGCGTTGTCTTTTCCTGACACCCACGGAAGCCATGACGTACAA
AAAAAAAATTAAAAACAGAGAAAAGAAAAACAGAAGCGAAAATTAGAAAA
ATAAAAATACTACAAACCGTGACGTAGAGGAGTAGATATAAAGAAAACGC
CGTCAAAAATAAATGGAACGCCAAGGGTCTCTTGCAGCAGGTTGGCTGCG
AGGGGGCTGAGACGCGGGCGAAAGGTCCAAGAGGCGTTTGAGCGGGTTGT
GCGTTGATTATTAACCTCCGTTCTTTTTTTTTCGTCCTTCGGTTCATCCG
GTAGTCCTGTCACGTGCTCTTGTCCGCGTACGAGCTGACGGTATTCTGC
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protein sequence of Ec-00_005180.2

>Ec-00_005180.2 ID=Ec-00_005180.2|Name=Ec-00_005180.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=874bp
MDPLRRTGGRDDEPRSHLVDPGYCKYYPGTAPTPYPSKITRTYPAPTLLA
QRQQQQQQQQQQHNALANEDGDSNDCESNDPNSLDNNNQDAGAAATATDN
AVNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVL
QWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRK
STIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQA
EAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPPPPPATPQVPSPLPP
SSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGAR
SIGDSGGGVGDRVGEASLDVRVENNSGGGGGGGGGAVGGRGWRSTVNIGN
SSSGVSSDGGGDGSGNSDADNSNSRNNAGVRTGGAAEAAAQESSSNRDVQ
GAATSSGGDNLDHDDDDDDGTGDGVGNITTLGHLLSVLGSRRIRVSPNGG
IGGIDDGGGGGGIAAAAPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNP
ATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLR
AVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFG
RRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRR
TAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACG
SSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGS
DHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNNNNNNNNTCSYLTWL
ESRSDFNHWPSPSSDDDDNAASD*
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mRNA from alignment at chr_00:7884297..7896365+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005180.2 ID=Ec-00_005180.2|Name=Ec-00_005180.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12069bp|location=Sequence derived from alignment at chr_00:7884297..7896365+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATCAGAACCAACGATAACTTGGCGGGCGCAGCCTTCGTCACTCTCTCTGG CTCGCGTTCAGAGACAGCAGGTCTGGTGCACAGACTGAGTACAGCTGCTG TAGATGAGGTGATTTGCGGACAGTAGTCCTTTGGTCTTTGTATACACTGC TGTCGACAACGTTGCTCTTTCTCACTTAGATAGCCCCGAGGGACACGACA AGTGCGATCCTCTTGCTTGTTCTCTTCAGGTACCGTGATTTTCTCCCACC GATCCTGTGTGTGCATGCGCATTGCGAACCTGGCCCCCCTTTTGTGGAGC CCCATACCTCACGCCCCTCAGCGGCGCGAACAAGACTCGCCGAGTTATCC CGGTAAGACGCTAAACGACAGGTCCGATCGAGTGTGCTGTTAAGTCTAGA CTACATACCATGCTATGGAGTATGTATGTAGGTCGAATTTGTGTGTGGAG TGGTCGGCCACCTCTGCGCCTGTGACCCTCGAACCGACCCGATACCTAGT AAGGATGCCAGGGCTTTGCTGTTACTGTTGCAGCTTTCGAACACCGTTGG GTTCGAAACCACAAACGTGTGTTCTCTGCCCCTTCCTCCCCTCTATCCTT CTCTTCTGTCGCTAGAAGCTACAACATGGTTGGGATCGGCTCCTGGCCTA TAGTCCAAGTTCGCTTAACCACCGTTGCGGACGGACGGTAAAAAACTACA ACCCGCACTCTTGCCACGGACAAGATACGTGTGTGTATGAAATATTAATA CACCTCAAGCACGTAATGTAGTCTAGGCCACCAAGTTTTTACCCATCACC TGGAACACACAATTCAGAACGCATGCTAATCCGCTTCGGGGCCACGGGTC AACCCTGGACTTTCGTCGGAGGCACCGAACCTTCCGTGTTGGGTGTCTCT TTCATTAGCATCTTTGCGCAGTTCGGCCGATCAATGAAAACACACGTGAA ATTTGTGCTGTGCTTTGAAAGCATGAACATGTGCGAGCGAAGCTGCTATT AATAGACGAATCCCCTATGCGCCTAGACTAATAGGAGGCTCCTATATACT TTGGAGTACATTGAAACGCGACCGGTTCACACCGTCCTACCTGGAGCCAG GGACAACTACAGTACATTGTGGTGAAAACACTCGTGCGATTTGGTGGTGT TGAATGTGTGACGTTTCGTCCAGACATGCTCCTCATGTCGGAGCACGCAT GATGAAACGACTCAATGCCCCCCGGCACCCGGGAGAGACAAGAAGAGTTA TTTCCAGGAACTCAACACGACAACAAGAGAGGTTGGTGGCGCTACCAACA GTACACCGCTCCGTGGCTTCTCTTTGAATCTTTAAAGGGGAAATAGTAGT TCGATCAGCGCACTGATGGATCTCTCCTCAACGTTGTAGGACGGTGGAGC CTCGTCCCCGGTCAAGGACCCGAGAAGACATACCACCACCGACGTCAAGA ACGACACAGCTTCACCGCTTCCTCTCAGTCGCCGAGCACTCAAACATCTA CCACATGGACCCTCTGAGGCGGACGGGAGGAAGAGACGATGAACCCAGGT CTCACCTGGTCGATCCCGGCTACTGCAAGTACTACCCTGGCACCGCGCCG ACGCCGTACCCGTCAAAGATCACCAGGACCTACCCCGCACCAACTTTGCT GGCCCAGCGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCATAATGCGC TAGCAAACGAAGGCGAGAAGGTTCAATCATATCTATGGCGGGTTTCCCTA CCACAATTGTGTGCTCTTGCACCTCTGCGTTTCTTCTTTTTGTTTTCGTC GTTTTTGTCTGTGCTAACAGCTTCGCTGCTCAAAACGCGAATACAACCCT TTTTTCTGTCGCCCGAGAGGCAATGACTATTGCCGTGGGGGTAGGATGCG CCCCGGTGGTCTAGTTGGTATCCTCGAAACCTTCTAGAGGTCAGGTCAGG GGTTCGAATCCTGGCGTAAGCGAGCTTTTCTTGCAAAGTGAGTTTTTCTC TCGCTTCCGCTTCTGGACTAGTGGATAGCGCTAGTTCGTGTGTACACAGA GGGAAGAGAGTGCTGAACTCTTCTCGCATTAAAAATTGAAGGCGAAGTAC CGCAGGAGGGGAGGGTAGAAAGGGGCTCTTCTGTGTGACCACGGGTTGGA GTAAACGGCACTAGTGCTGTGAGCGCTGATTTGAAGTGAAGACCAAAAAA ACAAAAAAAAGGATCTATTATGTTTCTTCATTTCAACAGGGACCCAAAAC ATCTCCAACACTGACATCGACAGCCCCCACAAAGCAGGATAAAACACGTA ACATGTTTCTCTTCGCTAATATTTAGTCTAGACCTCCTGCGGGCAGGATG TGTAACAAGGTTGCATACCTCCCCCTCCTTATGCTGCCTCAAACTATGAT GCCAGTGTTGTCGCTTCCTGCTCTGTTGTAGAGCACAGCAGTGTTGTCCC CATTGGCATGCGGTGGTGTGGAATTGAAAAATGGGGCTTTTCCCCTATGC TACAAGCACTGTCCTAGTTACTTCCTCCTTTTCTCGGCACAGATACTAAC GTCAGCGCCTCCAACAACAATTCAGACGGCGACAGTAACGACTGCGAAAG CAACGATCCAAACAGCCTTGACAACAACAACCAGGACGCCGGAGCTGCCG CAACGGCAACAGGTAAGAACAGGGTATCTGGGGTCACAAAAAACGAAGGA GTGCTCACTTGTATTTTAGACCGTCCTTGATTTCTCATACGGTCAGGCTG ACGACCAGCATTTGGTTCAACCCCAAGATCATCGACCGGAGTCGATACCC CATGTTCCGTAACATGACACGCAGGAGATGGCAGTTGTTTGATATGTTCT AAGCGAGACCGGCAGGTAGGAGCATGTCTCATCGGCGCACGTGGTAATGA GACGTGCAGCGCGCAGCCGAACCACGACGTTTCGAATCTTTGCACGGCAA GTGCTTAACATCCTTCCTTGTCCCCAACTGTTTCTCCACGGTTGCTACTA CCGCCATGCTGTACATGCGCAGATAATGCCGTCAACGCGGCCCATCCGAG GACGAAGCGGAAGAACCCTGAAAAGGTCGATGATAAGGCCCGCTGCCCGA TTTGCCAGGACCTCCTGCCGGAGGAAAACAGAGGCATCGTGAAATGTGTG AGTGAAAAATCCGGCACGGGTGTGTTTGTGTGGTTTGAATCCAAGGGGCG TGGTTGGCACACAGCAGGTAGAGAGTTCCTTCCACGGAACGTCCCATTTA CACAGCGGCAAGATTTCGCCCATTAGTGCGGATGGGTGTGTGTCTAATCG CACGAGGAACGGTCTCATGGTCGAAGGAGCGCAAGCAGGGAACACAAGAC TACCAAACGAAGTCCATTCGAACAATTTAAAGTGCGAAATGTCGCCTCGG GGTTGAGCGAAGGGTCTCGAAGTGGACCGCCTTCCTGGAGGAATACAGAG AGAAGCATCGTCAAAGCGCGAGCGAATACAGTTAAACCCTCGGAGCCCAA GCAACACGAGTACGCAAGCGGCGTTTCGCTGGTGGTCTAGCTGAGCATAG CACACGAAGCACCCCAGCACGGCAGAGCGCATAGCGTAGCAAAAACGAAC TGTTATACGGGTGCTACTGATTTGGAGCGGAAGGTTGATCTGTGTCATAT CAAAACTGAGCTACATGAAAAGGATTTTTCTGTTTTTTCCTGCTACGATC TCGTTTTGGTACTAGCGGTTTTGGCCAGTTTTGCCACTGTTGGTGCAGTC TATTGGCTGCATTGCATGAAGCCTTTGAAATCTTCACCCGAAAACCTCCG GACTATGCGATTGTTCATTGGCGCACGAAGCCACACACGTACAGGCCGCG GAACACGTCCGGGGTTTTCTGCCGCTAGGGCCTTCAGCTGCGTATTGTTG TCTTTTTTTTTCAAGATGCTTCTCTCTATGTACCACTTGCACTCCATTTC ACTCAAACAGAGACAGCGGTTTCGTGCAATGTGTGCGGTGATTCTGATGG TTGTTCTCTTCTTCTTGTTTTTCTGTTGTCGGCCGCAGGGACACGTGTTC TGCTTGAAATGCGTTCTCCAGTGGGTCAAGAAGCAGCAGAACAGCTGCCC AACATGCCGCGCGAAGGTGTGCCACATCAAGAAGACGCTCAGCTTGGCGG AGGCCCTAGAAAAGAATGTGAACACGGCTTAGAGAGTTTCATGTCAGCTG CGTCCACTGTTTCCGTTCTGTTTCGTGTGCTTCGTAGTCACGTTCCCTCT GTCTGTTTTTTCCCTCAATGTTTATTTTATTGGATCCGACCGCCGCGCGG GTGTGGTGGTCGAGTTTCCTCGTGGCTGTTGCAACAGCGAGCGGTTCCAT TCCCCCCCCCTCTAATCGAAAGCCACTTACCCAACGAAGATGTTTTGGGT GTATTCTTTGTGTTTTTTGGGGATAGATTTGCTAAAACATGTTCTCTATG TGTTAGTCTTTGATCGAAAAACCCATATGAATTGAACCCAGAATTTACCA TGCCTACATATCTCTCAAAATCGATACGCACATTATTTTGTTCGGACGGT CATTGTTTTTGGTTGGTTGGTGTGCAGCATTGCAGCGCCTGCTGTTTACA CCGGGTGCCTATTTAGCACCTGCCTGTCAACTAACTGCATACCACTGGCG TCTCATGCAATTTTTTTCACTTGTTCGTCGTCGATTGTTCTTGTCCTTTC CGTGCAATTTTCTCGGGTGGTCAATCCGCGGGGCAGGCTAACCGGAAACC TCTGACGAAAGCCCAGCTGAAGAGGACGAAGAGGAAGTCTACTATCGGCA AGCCCTTCCCGGTGAGCCTTCCTTTCCACAGAAAAAAAGGTTGCGTTAGC TTTGATCGGGCGGCTTGAGATCTCCCGAATCGCCGGAAGACTTCGTTATC ATCCCACGGTAGTCACTGACATTACAGTATCTTAAGGTTGACAACAACTG CAGTGCTGTAAATTGTCGCAGCAGGACATGTTGATAGGCTTTTGAGTCAT TTGTCTTGCGGCCTATCACACGCGTGTTATTCACGTTGCGGATACAGCAT TTCGACGGAAGGATTTCATCTGAGCAAAACAGGAGACCTTGTCTTCCCAC CTTGCCTCCTTCCTCTTATTTGACGATGGTCAAGAAGCACGCGCTCACCG ACTGGCAGGGGTATAGATGGCAGTGCGCGCCCATACAGCGAAAGCGACGT TCTCCAGCAGTTGAACAAGGGTCACGTAGTAGGAGGAAGGACAAAACAGG AGGAGCTCCGTCGAGTTTTTTTTTAACCCTCAGCCCAAATTTTGTACTCT CCAAGTGTCGGAGTGGTGTTAAACGCCGTCCCCTCGAGTTCCCGTCGCCA ACGGCGACAGCATTGCTGGCGGTCGCCCTGCTGCTGCCGTACCGATGATG CCCCGTGCTGTTGTTGTTGCCGCTGATGGGTATACTACACCGGGCATCGA GCGCAGAAGCCCGACATCACGACCGAGAAGATTCGCGTCCACAAGAAGGT TAGCCGGGAACAAATCAGGCAGAACGCCATGGCGCCACACCCTCAGGTGA GGGGGAGACAGCCCCAGAGGCCGTCCCACTCACCGCCTCCCGGGTCTTGA TCGGATCGACTCTTCCGCTCTTCCGCCGGAGCGCTGCCTACAGCGTTTGC GCTCCAAAAAACACCTCTCTGACCCTAATGGTTTGTTACTTTCCCATGCG TTTTTCGCTCATCATGCTTGAGGCATGCATCACCACACGAAAAAGGAGAA TTGTGCGCGGTTCTCAATACCACGGGCTCGGGTAAACTTACATGAGATCG ATGCCGTAACCAAAACATATTTGAGCCTTAGGCTCCACCGAGACCGGTTA TAATTTCTACGGTGCGAACGGACGTGTACAATCTCTAGCGTGCGCGCCAG CGTTATTATAGTGCCAAACAGAGAGCGTGCCCCGACGTCGGGAAAATCAA AAGACCCACAAACCCCGGTTGTGAACTCCCGATATCGGGAGTTTCCTAGG GTCCAATACGGCGCCAACTTGTGTACTTTCATATGAATCGCAGAGGAGGC TTTCTGCGCCCCCTTGAAGCGGGGGATTTTCGGCTGAGAAGGCACGGGCG AGGGCAAGCAAGATATTGCGAGGGAGGCAGGAGTAAGAGTAGCAGCAAAG AAAATTCTACTCTAGGGCGACAAGATTGCGCTACCTGACACGCACATCGC TCGTCCTTCTTCTTGAGACAGGCGCCAGGGGGGTTCCTGCACGCGCAGGA GCAGGCGGAGGCGGCAGCGGAAGCGGCACAGGCGGTGCCTGACGCACAGC CAGACCAGGTGGGGGGTAATAGCAAAGGCTTGAAGCTTCGGTAGCGTTAT GTAGGGCATGCTGTTGGCATTGGCCGTCTGTTGGAGGCGCCATAGATGAC GTCGGGAAATTCTGCTCGCAGTCCCCTTTTGTCGCGGCAATCGTTTCCGT GTGCCCCCGTCCTTTTCTCCGCGGCAGCCGTTTCCATCACCACCCCCTTC CTCTTCCCCCTCCCACCCGACCCCCCACCGCCCCCCTCCGCCGGAAATCC AACACCAGGTGGAAGCCATCGTGGACCAACAGGTAGCCATCGCGGTGTTC TCGAGTTCCCCCCCCCCTCCCCCTGCTACCCCGCAAGTTCCCTCGCCCCT GCCGCCGTCGTCGCCGCGTTCTCTTGCGACGGACCTTGAAGACCGGCGGG TAGCGATCGAGGCCGACCGCCGGGCGTTGTTGGAGTCTACCTCAGCTTTC AGGGGGCACCGCAGCGTCGGCGGGGGGTCCTACGTTGGAGGAGCCGGGGG GGCGAGGTCGATTGGTGACAGCGGAGGCGGGGTCGGTGACCGTGTCGGCG AGGCAAGCCTTGACGTGAGAGTGGAAAACAACAGCGGCGGCGGCGGCGGC GGCGGCGGCGGCGCGGTCGGTGGTCGCGGATGGAGATCGACTGTGAACAT AGGCAACAGCAGCAGCGGCGTCAGCAGCGACGGGGGTGGGGATGGCTCTG GAAACAGTGACGCGGACAACAGCAACAGCAGGAACAACGCCGGCGTGCGC ACCGGCGGGGCGGCAGAAGCCGCGGCCCAAGAATCTAGCTCGAATCGTGA CGTGCAAGGAGCAGCGACATCGAGCGGCGGAGACAACCTCGACCATGACG ACGACGACGACGATGGTACGGGTGACGGCGTCGGCAACATCACCACGCTC GGGCACTTGCTGTCGGTCTTGGGCAGCCGTAGGATAAGGGTGTCACCAAA CGGTGGTATTGGTGGTATTGATGATGGTGGTGGTGGTGGTGGTATTGCAG CCGCCGCCCCTAGCTCTGTCCCGTGCTCACCGCTCCTGCCCTCATACAGC AGGCGTAGCAACAACAACAAAAGCATTAGCAATAGCAGCCACGGCGTCGG GAACCCAGCCACCGACCCGGAAACCAGAAGTGCGGCGCAGGCGGCCATGG CAGTCTCTCGAGCGGCGTCTCGGTACACCTCGCTGGTGCCAGAGCAAGCG TTGGCAGTGCAGGGACTGGCAGCCCTCGAGTCATCGCCGACGCTGCGGCA GCTGCGCGCGGTCGCCAGGCTTGTGGTCGGCGGCAGCGCCTCAGCTGGGA TGGCAGGTGCTCCGGCTCTGGCAAGCGTGTCACGGAGACGGCAACCGCAA GACGGGTTAGGACAAGAGAGCAGACAAGACCGGGACGACGAAGCAGGCGT GTTTGGGAGGCGAGACGGCGGGAAAAGCAACGGCGAGGAACGGGGTAACT TGCTTCCAAGGATCGACAACGACGACAACCGCAGCGACAACATCAGCAGC AGAGGCGGCGGCAACGGGTCTGAGGAAGAGCCCTGTGTCGAACCCGCCTC TCGACGCACAGCGGTGGGGGAGAGGGACGTCAGTGAGTCAACAATTTTGG TGCAGCAGCGTTTGGCCTAAAACATTTCGACCAAAGCAAACGACGACAAC CCGTTGTACAAGCGATTAGGTTAGCAATCATGCCTTCCTTTTCCCCTACG GGTCGTCTTGCATGCAGGCCACACGGAAGAGCGCGACGAGTTCGCGTTTC CAGGAAGGAACGACAACGACACTACTGCGGTGAGTTTTTTTTGCGCTTTT AGGCGAGTCGAGCACAATGAATGCTTTCGGCAGTCGTTCAAAGGAAACAT GACATGATTCCCACCCCACAACATTTCAACTGAGATCGGACGATGTCGTT GCCGAATGTGACTTTTTTCTCGAATGCCTGCCTTGCTGATGGGTTTCAAG TATGTCGTGGACAGTCTTGAGGCGTTTCTCCGAAATGCCTCGCACAACGA ACCACATACATACATTTTGATGCCATCACGGACCAACTTGAAACACCGAA ACCAAAACGTAGCATCTTCCCCTGACGGGCTCCTCGCGCCAGGGAGGAAC CACCGGCTCGGCTTCTCCCATCCTCAGCGACTCTTCGGCTACCGTTGCCT GCGGCTCTTCGACGTCCATCCCCGAAAGCTTTGCGCACACATCCGGCAAT GACGCTGCCCCCAGCGGCTCCATCAACGACGGCGCAAACACTGCTGTTGC CGGCGCTGAAGATGCCTGTGGTGGCGACGCCGATGGTGCCGGGGTAGCAG GTAGTGACCATGCTGGTGGAGGTATCAGTGTTAGCGCGAATGGCGCTGCA GGACCTGGTGGAGTTGCGATCAACTCCGGCAGGGTCCACTCGAGCCCCCT CAGCAGCAACAACAACAATAACAACAACAACACCTGCAGCTACCTGACGT GGCTAGAATCTAGGTCGGACTTCAACCATTGGCCATCGCCGTCGTCGGAC GACGACGACAACGCCGCCTCCGATTGAGGCCCCAACGACACGCACCTCGG TACCGCGACCCGCCCAGGAGGACCCAGATGTCTTCGTCACGACCATCCTC GTCAATCAGTGTTCACGAGCACCCCCAATGCGGCAGCCACGGTTGCCTCT GCGGCGGCGTGGGCTGTGGTGGGCTCTGCTGCCGGAGCGGCTAGCGATAA CGACGACCCGTCGTTGGTTGGAACGGTGCACGACCGTCCCGAGGTTCGGG AGGATCTTCGCCAGCCCAAGCGCTCGCGGCGCTCGAGGGAAGTGTCCCGG GTATGGACTTTTCCGCTGGGGCTGGGGGGGTGGTAGTGTTTCCACCGTGA TGCCGAGGTCAGAAGCGAGTCTTGATCGTGATGACGGCCTCTGGAGACAC AAAACCATCATGAGAACCGAAGAAGTTTCGCAACAGTGGCGAGGAGGTGC GCAATAGAGTCCTTGTGGCTTGGTGCGCGGGGATGTGTCAAGACGGTGGG GTCAGGGCTCGCGCGGTTTCTCTTCCGACTGTCATAGGGAGAGTTCTGCT GAAACGTCAATCAGGCGGATCAGTTCAGTAGGTGCCGGCATCGAGAGTGG CTGCCTTTCCCCAGCCTGTCTTTTTTTGATACTTGGTTCAAACTTAACTA CTGCTGTACTGTTGTCCATTAGAGTCGAAGTGCGCGGTCAAGAAAGAAGA GGCGAAATCGCCCTCCCTCTGGTGTTCGTGCTCAATCAGCCCTCGGCACT GGGGTACTTCGACAAAGTTGATACAGTTAAGAGCTACAAGATGTCGTGTG GCAGCAGAGAGGAGAATCATGGTGTGGACGCCCCTACCATCAGGTCTCTT TTGTGCTCGTTCTTTGATTTCAGCTGCCAGGATGGATGGGGAACCACCAA AAGGGGCGGAGGAAAGCTCACTCAGTATTGGGGGCGAGGGCGGGCGGGGT GCAACGACGCCGACCGATAATCTTGGGGGGATTTGGCGTTCAGTTGAAAA CCACCCCCCGACAGCCTGTGGAAGGCAAAGAAGGGTGTGGTGTGATGAGA GTGGTGTGACGAGTGGGTGTGAAGGGTGGGTGTGAGCATTGTGTGCGGGG GGAGGGTTGCTGACAATACAGGTTAGCGCTTCTTCGTTCGTTGCTCAGGC GATGCTATACGGGTATGGTATGCGAGCGAGAAAGCTCTGGGCATCGTGGG ATACAGTCGGGCCCGATGCATGAGGTCGACGCTACCTCGAGGGGTCTTCG TCGAAATCCTTTGTGGGGGTGAAGTCGATTTACTGTAGTTGGTGGACTTG AGGTTACTAGGTTAACACGCGGGCGGTACCCGAACAACAGACGCAGGAGA TTTTTTCGACACTTGCGCGCCAGCTGCTACAATTCAGTGTTGAACGGGAG TTGCATACTGCTAGATGCTCTCTTGTTTAGACTGAAAAGCTCTTGCGGGG GGGGGGGGCGCCCTCTCTTGCCCGTGATTCGCGCATGCAATTTAGCGTAA AGAGAGGTGGAGCTTCTTACGATTGAACGAGGCGGGGGCAGTGTTGGGGT GCAATGTGAACGCCGCTGGGAGCACGGAGACGCTTAGTATCATGATGGCC TCGCTTCGCGTTTTGTTTGCATGCATCCGATGGTTTCATCGTTTGTTCTG AGGAAAGCAAGAAAAACATCGTAAACATTCTCTGCCAAAAACAAGAAGTC AGGTCCTATCGCTGCGGCAATAAGGGGCTGAGTCTTGCTCACAAGAGGGG TTTCTTGCGAGCGGGTCGCGACACTGTATGAATAGTGGTAGGACTGAAGG CCGCGTTTCTAACAGGGGAAACTTAAAAGTGTGACGACGGAAAACGCAGC AACAAGCGAAACGAGATAACACAGGGCATGTGGGTGCCAGCGGAATTTCA CCAATAGTGCCCCTGCCACCTACTGGAAGGTAATCAAGTATTCCCTCTCC CACTCGTTTCGGATCGACGAGCGAGCTGGCAGGCGTACTGCTGCTTGCTC CACCCCAACGATGCACGCTGGCTTTGGCCTGTCGACTTCTCTGTACGGGG GGAAATCACCGCGAAAATATGCCCTTCAGCGACGACGCTGGGACCAAGGG TCGTAAGACCGTGTACTCCTGGATTCTAGACATGAAGCTGTTTTGTTTTA GCACGAAAAGAATCATTCGTAATTAGCGGCATGTATGCAAAGTTAAGATG TGAAAATACCAAGAAGATCGGTTCACCAAGAACCGGGGAATGAGAAATGA AGAAAGGCAGGGCAAAGCGCACCTCCAACTTAACAGAAAAACAAAACGTT CGAGTCTGAACAACATTAGCCTTTCAATTTCGCATGCCATCGGTGCACCG TCGTCGTAAGTAAATCATTGACCACGAGGAATTAAGACTTGCCCATAAAA GTACCGTCAATATGTAATAGAGCACGCGATAGTACCGTCCTAATCGAGGT TGATGAGACAGCAATGATGGACATCGAACCTCCACCCCACACGCCGCGCA CACCTCTCTCCGACAAAACGAAATTATGCGTGCTACGGTACTCATACGCG CACGTGACAGGGGTCGTTTCCCTGGAAGCAAGCCACCCAACCATGCCCGC AACCCCCACCTCTCGCTAGCCGTCAAGCACCCGACAAAAACGCAAGCGGT GAGCGCACAACAATCAAAACAAGTACCCCCCCCCCGGCGCCCCCCGCCAC CAAAATACAAGGAAGAACTGGGGAGCCAACAGAGGCGGAATAGATTCAGC ACGAATCCATATAACAAAAAAACACTACCCCCACCCATCACCAAAACACA AAGAAAACTCGGGGAGCCAACAGAGGCACCCCCCCACCCACCCAAATGCA TCGGAAAACTCGGGCAGGGATTCCGCGCCTCAAGACCGGTGCTGCTACGT TTACCACCGACGCCACACACAGGTACCTGCGTTGTCTTTTCCTGACACCC ACGGAAGCCATGACGTACAAAAAAAAAATTAAAAACAGAGAAAAGAAAAA CAGAAGCGAAAATTAGAAAAATAAAAATACTACAAACCGTGACGTAGAGG AGTAGATATAAAGAAAACGCCGTCAAAAATAAATGGAACGCCAAGGGTCT CTTGCAGCAGGTTGGCTGCGAGGGGGCTGAGACGCGGGCGAAAGGTCCAA GAGGCGTTTGAGCGGGTTGTGCGTTGATTATTAACCTCCGTTCTTTTTTT TTCGTCCTTCGGTTCATCCGGTAGTCCTGTCACGTGCTCTTGTCCGCGTA CGAGCTGACGGTATTCTGC
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Coding sequence (CDS) from alignment at chr_00:7884297..7896365+

>Ec-00_005180.2 ID=Ec-00_005180.2|Name=Ec-00_005180.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2622bp|location=Sequence derived from alignment at chr_00:7884297..7896365+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCCTCTGAGGCGGACGGGAGGAAGAGACGATGAACCCAGGTCTCA
CCTGGTCGATCCCGGCTACTGCAAGTACTACCCTGGCACCGCGCCGACGC
CGTACCCGTCAAAGATCACCAGGACCTACCCCGCACCAACTTTGCTGGCC
CAGCGGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCATAATGCGCTAGC
AAACGAAGACGGCGACAGTAACGACTGCGAAAGCAACGATCCAAACAGCC
TTGACAACAACAACCAGGACGCCGGAGCTGCCGCAACGGCAACAGATAAT
GCCGTCAACGCGGCCCATCCGAGGACGAAGCGGAAGAACCCTGAAAAGGT
CGATGATAAGGCCCGCTGCCCGATTTGCCAGGACCTCCTGCCGGAGGAAA
ACAGAGGCATCGTGAAATGTGGACACGTGTTCTGCTTGAAATGCGTTCTC
CAGTGGGTCAAGAAGCAGCAGAACAGCTGCCCAACATGCCGCGCGAAGGT
GTGCCACATCAAGAAGACGCTCAGCTTGGCGGAGGCCCTAGAAAAGAATG
CTAACCGGAAACCTCTGACGAAAGCCCAGCTGAAGAGGACGAAGAGGAAG
TCTACTATCGGCAAGCCCTTCCCGAAGCCCGACATCACGACCGAGAAGAT
TCGCGTCCACAAGAAGGTTAGCCGGGAACAAATCAGGCAGAACGCCATGG
CGCCACACCCTCAGGCGCCAGGGGGGTTCCTGCACGCGCAGGAGCAGGCG
GAGGCGGCAGCGGAAGCGGCACAGGCGGTGCCTGACGCACAGCCAGACCA
GGTGGAAGCCATCGTGGACCAACAGGTAGCCATCGCGGTGTTCTCGAGTT
CCCCCCCCCCTCCCCCTGCTACCCCGCAAGTTCCCTCGCCCCTGCCGCCG
TCGTCGCCGCGTTCTCTTGCGACGGACCTTGAAGACCGGCGGGTAGCGAT
CGAGGCCGACCGCCGGGCGTTGTTGGAGTCTACCTCAGCTTTCAGGGGGC
ACCGCAGCGTCGGCGGGGGGTCCTACGTTGGAGGAGCCGGGGGGGCGAGG
TCGATTGGTGACAGCGGAGGCGGGGTCGGTGACCGTGTCGGCGAGGCAAG
CCTTGACGTGAGAGTGGAAAACAACAGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGCGGTCGGTGGTCGCGGATGGAGATCGACTGTGAACATAGGCAAC
AGCAGCAGCGGCGTCAGCAGCGACGGGGGTGGGGATGGCTCTGGAAACAG
TGACGCGGACAACAGCAACAGCAGGAACAACGCCGGCGTGCGCACCGGCG
GGGCGGCAGAAGCCGCGGCCCAAGAATCTAGCTCGAATCGTGACGTGCAA
GGAGCAGCGACATCGAGCGGCGGAGACAACCTCGACCATGACGACGACGA
CGACGATGGTACGGGTGACGGCGTCGGCAACATCACCACGCTCGGGCACT
TGCTGTCGGTCTTGGGCAGCCGTAGGATAAGGGTGTCACCAAACGGTGGT
ATTGGTGGTATTGATGATGGTGGTGGTGGTGGTGGTATTGCAGCCGCCGC
CCCTAGCTCTGTCCCGTGCTCACCGCTCCTGCCCTCATACAGCAGGCGTA
GCAACAACAACAAAAGCATTAGCAATAGCAGCCACGGCGTCGGGAACCCA
GCCACCGACCCGGAAACCAGAAGTGCGGCGCAGGCGGCCATGGCAGTCTC
TCGAGCGGCGTCTCGGTACACCTCGCTGGTGCCAGAGCAAGCGTTGGCAG
TGCAGGGACTGGCAGCCCTCGAGTCATCGCCGACGCTGCGGCAGCTGCGC
GCGGTCGCCAGGCTTGTGGTCGGCGGCAGCGCCTCAGCTGGGATGGCAGG
TGCTCCGGCTCTGGCAAGCGTGTCACGGAGACGGCAACCGCAAGACGGGT
TAGGACAAGAGAGCAGACAAGACCGGGACGACGAAGCAGGCGTGTTTGGG
AGGCGAGACGGCGGGAAAAGCAACGGCGAGGAACGGGGTAACTTGCTTCC
AAGGATCGACAACGACGACAACCGCAGCGACAACATCAGCAGCAGAGGCG
GCGGCAACGGGTCTGAGGAAGAGCCCTGTGTCGAACCCGCCTCTCGACGC
ACAGCGGTGGGGGAGAGGGACGTCAGCCACACGGAAGAGCGCGACGAGTT
CGCGTTTCCAGGAAGGAACGACAACGACACTACTGCGGGAGGAACCACCG
GCTCGGCTTCTCCCATCCTCAGCGACTCTTCGGCTACCGTTGCCTGCGGC
TCTTCGACGTCCATCCCCGAAAGCTTTGCGCACACATCCGGCAATGACGC
TGCCCCCAGCGGCTCCATCAACGACGGCGCAAACACTGCTGTTGCCGGCG
CTGAAGATGCCTGTGGTGGCGACGCCGATGGTGCCGGGGTAGCAGGTAGT
GACCATGCTGGTGGAGGTATCAGTGTTAGCGCGAATGGCGCTGCAGGACC
TGGTGGAGTTGCGATCAACTCCGGCAGGGTCCACTCGAGCCCCCTCAGCA
GCAACAACAACAATAACAACAACAACACCTGCAGCTACCTGACGTGGCTA
GAATCTAGGTCGGACTTCAACCATTGGCCATCGCCGTCGTCGGACGACGA
CGACAACGCCGCCTCCGATTGA
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Synonyms
The feature 'Ec-00_005180.2' has the following synonyms
Synonym
Esi0409_0009
Esi_0409_0009