Ec-00_005130.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005130.1
Unique NameEc-00_005130.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length778
Homology
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 1521 bits (3938), Expect = 0.000e+0
Identity = 777/777 (100.00%), Postives = 777/777 (100.00%), Query Frame = 1 
Query:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREENNSSHFA 2331
            MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREENNSSHFA
Sbjct:   28 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREENNSSHFA 804
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BLAST of Ec-00_005130.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 1080 bits (2794), Expect = 0.000e+0
Identity = 560/613 (91.35%), Postives = 579/613 (94.45%), Query Frame = 1 
Query:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG 1839
            +KLFEDRNFLVTVVFDG+PPPAK GTSQHRRERR+KSAQQARALH AGGCP+E+NKLASAACAFDGRVTAEIATRLRARI GEVYIAPGEADPQLVVFQDIHLATG NVYVYANDSDLTVLGVRDLLVEVVKN RGEL+GRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIH PVDEGLDYTPLPEPTARRRL+LFA+IVGNDFAKFKNVGPVTAARLAFVD  SGVWA SLLPFDAVVG LASRLLVES+EEDTPA  RE EIRLRACHTMFTQPVVWNPLSGELQHLSGAPT E+ITRH GT ELSPLAS VAR D CPLTG EWDPPLGTAQAKGQA GEDA R KK+ TPE AS+RPPNASSR SR+RGPQ+TNNYR HGFSRLP ETEDYTK TVPKLREFL+VFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLM DLPATGLRIKEWSAMRR+LPEISKAVILRFM EV KLAGEGSRLWYRS+QRVLDMGNLSRFWAV AAGGIMWIGTSAGASFSADKEYR+RIKLRVEEVDE+APPT XXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG
Sbjct:  273 VKLFEDRNFLVTVVFDGQPPPAKGGTSQHRRERREKSAQQARALHAAGGCPMEVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLTVLGVRDLLVEVVKNTRGELIGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHTPVDEGLDYTPLPEPTARRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATSLLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPLGTAQAKGQAAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAPPTEXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG 885
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 1019 bits (2635), Expect = 0.000e+0
Identity = 550/661 (83.21%), Postives = 560/661 (84.72%), Query Frame = 1 
Query:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGS 1983
            MKLFED NFLVTVVFDGRPPP KSGTSQHRRERR+KSAQQARALHDAGGCPVEINKLASAACAF+GRVTAEIATR RA IRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNA                                                      T+R                 K    +  ARLAFVDTESGVWAASL PFDAVVG LASRLLVESREEDTPA RREFEIRLRACHTM TQPVVW+PLSGELQHLSGAPTREEITRH GT ELSPLASRVAR D CPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASR+RGPQDTNNYREHGFSRLP ETEDYTK TVPKLREFLSVFRCLD AGTSGF KALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLM DLPATGLRIKEWSAMRRYLPEISKAVI RF+GEV KLAGEGSRLWYRS+QRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYR+RIKLRVE VDE+APPT   XXXXXXXX VVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGS
Sbjct:   28 MKLFEDHNFLVTVVFDGRPPPVKSGTSQHRRERRKKSAQQARALHDAGGCPVEINKLASAACAFNGRVTAEIATRSRALIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNAT-----------------------------------------------------TSRNS---------------KMSDQLLPARLAFVDTESGVWAASLQPFDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEGVDENAPPTEQEXXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGS 620
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 912 bits (2357), Expect = 0.000e+0
Identity = 481/570 (84.39%), Postives = 492/570 (86.32%), Query Frame = 1 
Query:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACH-------TMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLR 1689
            MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEV IAPGEADPQL VFQDIHLATGANVYVYANDSD TVLGV DLLVEVVKNARGELVGRCVRQRLLFQPT WSFLRSGD  G LRQLHGIHQPVDEG DYTPLPEPTARRRLLLFAIIVG DFAKFKNVGPVTAARLAFVDTES                      V  R     ++R  +E   + C         +   PVVWNPLSGELQHLSGA TREEITRH GT ELSPLASRVAR D C LTGREWDPPLGTAQ KGQA G DAGRQKK+ATPETAS+RP NASSRASR+RGPQDTNNYREHGFSRLP ETEDYTK TVPKLREFLSVFRCLDN GTSG NKALLAQMAGDVVRLIRSCGVLDTNLAFRHP PDLSSFEEKEARLM DLPATGLRIKEWSAMRRYLPEISKAVILRFM EV KLAG+GSRLWYRS+QRVLDMGNLSRFW V AAG IMWIGTSAGASFSADKEYR+RIKLR
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEADPQLAVFQDIHLATGANVYVYANDSDFTVLGVLDLLVEVVKNARGELVGRCVRQRLLFQPTTWSFLRSGDVRGRLRQLHGIHQPVDEGFDYTPLPEPTARRRLLLFAIIVGKDFAKFKNVGPVTAARLAFVDTES----------------------VSGRHLCYHSMRL-WETWPQGCWWSPGRRTRLLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKATPETASSRPSNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMREVNKLAGKGSRLWYRSLQRVLDMGNLSRFWTVQAAGSIMWIGTSAGASFSADKEYRVRIKLR 547
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 800 bits (2065), Expect = 8.440e-284
Identity = 454/592 (76.69%), Postives = 471/592 (79.56%), Query Frame = 1 
Query:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVR-REFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGND 1773
            MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPG+ADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRD LVEVVKNARGELVGR VRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPT RRRLLLFA+IVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVG LASRLLVESREEDTPA R R  E   R   T   +P          Q  +  P R+     AG            R    P  G   +   G  +   QA        ++RAT ETASTRPPNASSRASR+RGPQDTNNYREHGFSRLP ETEDYTK TVPKLREF+SV+RCLDNAGTSGFNKALLAQMAGDVVR+IRSCGVLDTNLAFRHPVPDLSSFEE+EARLM DLPATGLRIK  +A                                     VLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYR+RIKLRVEEVDE+A PT  XXXXXXXXX VVGND
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDRLVEVVKNARGELVGRSVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTGRRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGDLASRLLVESREEDTPAARPRGVEPAERRTPTFVRRPD---------QGGNHPPYRDVGAIPAGVPCGPGRCLSADRARMGPTAGYSTNEGAGGRRGCWQA--------EERATLETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRIKIAAA-------------------------------------VLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAHPTEQXXXXXXXXXEVVGND 538
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BLAST of Ec-00_005130.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 759 bits (1960), Expect = 2.360e-263
Identity = 409/784 (52.17%), Postives = 519/784 (66.20%), Query Frame = 1 
Query:   10 FEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGV-WAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNAS----------------SRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREE 2310
            FE R F VTVV DG  PPAK  TS+ RR +R+ +A +AR L   GG   EINK AS AC FD RV A +AT LR +I GEVYIAP EADPQ+V+FQDI+L TG  VYVYANDSDL VLGVR LL +V     G L G C+R RL+FQP  W+F    + + +LRQLHG+ +     L  +PL E  ARRRL LFA + GNDFA FKN+GPV AA++AF   E      A+++ F+A+VG LA  ++ +S+EE+TPA   E E +LR  H MF   VVW+PL   L+H SGA +   IT+  GT E S +AS +A  +  P TG+ W PPL   +   +          +RAT    S  P                    ++ SR+    DTNNY +HGFSRLP   ED+ K TV +LREFLSVFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE  +M +LP    RI  +  ++++LPE+SK+VIL+F+G+V  ++GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G SAGASFS  K Y +RI+LRVE +DESA P+              G  PR    LVAL V+AALCECPAGI GGCSH AM LFL RLLQM+E++LATFNP+TCTG AC WIMQ+ KG RS +QC LYG  +S GT VVR +RDP+   G+DDD      GV  IDRM  FNPHP+GG W   K+HFDAG+D S+ K DKL+AFV+  R  D++ V +DYLPP VRE+
Sbjct:   70 FESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGRLTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREADPQIVIFQDIYLETGCTVYVYANDSDLIVLGVRSLLWDVRGTDAGNLTGVCIRSRLIFQPPEWAFAIDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVSFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEL---------RRATRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMSAGASFSDTKTYEVRIQLRVEALDESAHPSAAEEEGRGVES---GQWPRPP--LVALGVVAALCECPAGISGGCSHTAMVLFLTRLLQMTEDELATFNPSTCTGRACSWIMQNCKGGRSGEQCSLYGEPLSHGTNVVRKMRDPRR--GFDDDLLAKVQGVTAIDRMQHFNPHPSGGKWDELKLHFDAGKDFSRFKMDKLLAFVDCARGPDNRAVAMDYLPPLVRED 837
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.090e-99
Identity = 186/399 (46.62%), Postives = 252/399 (63.16%), Query Frame = 1 
Query:  481 DAHGW--LRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGV-WAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPP-----------NASSRASRSRGP--QDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIG 1629
            DA G+  LRQLHG+ +     L  +PL E  ARRRL LFA + GNDFA FKN+GPV AA++AF   E      A+++PF+A+VG LA  ++ +S+EE+TPA   E E +LR    MF   VVW+PL   L+H S A +   IT+  GT E S +AS +A  +  P TG+ W PPL   +   +          +RAT    S  PP            ++ R  RSR     DTNNYR+HGFSRLP   ED+ K TV +LREFLSVFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE   M  LP    RI  +  ++++LPE+SK+VIL+F+ +V  ++GEGSR+    +Q+V+DMGNL+R W VPA  G+M++G
Sbjct:    2 DAEGYDFLRQLHGLPRRHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEF---------RRATRRAGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPAKNGLMYLG 388
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BLAST of Ec-00_005130.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.030e-70
Identity = 133/291 (45.70%), Postives = 181/291 (62.20%), Query Frame = 1 
Query:  817 MFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPN---------------ASSRASRSRGP--QDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSA 1638
            MF   VVW+PL   L+H SGA +   IT   GT E S +AS +A  +  P TG+ W PPL   +   +          +RAT    S  P                 ++SR  RSR     DTNNY +HGFSRLP   ED+ K TV +LREFLSVFRCLD+AG S + K  L ++AG +V +I+ CG+L++N AFRHPVPDLSSF++KE   M +LP    RI  +  ++++LPE+SK+VIL+F+ +V  ++GEGSR+WYR +Q+V DMGNL+R W VPA  G+M++G S+
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEF---------RRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMGNLNRLWGVPAKNGLMYLGMSS 282
[Close]
BLAST of Ec-00_005130.1 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 4.110e-69
Identity = 152/358 (42.46%), Postives = 203/358 (56.70%), Query Frame = 1 
Query:  481 DAHGW--LRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGV-WAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPP-------------NASSRASRSRGP--QDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFM 1500
            DA G+  LRQLHG+ +     L  +PL E  ARRRL LFA + GNDFA FKN+GPV AA++AF   E      A+++PF+A+VG LA  ++ +S+EE+TPA   E E +LR  H MF   VVW PL   L+H S A +   IT+  GT E S +AS +A  +  P TG+ W PPL  A+   +          +RAT    S  P               ++ R  RSR     DTNNY +HGFSRLP   ED+ K TV +LREFLSV                       VV +I+ CG+L++N AFRHPVPDLSSF++KE   M +LP    RI  +  ++++LPE+SK+VIL+F+
Sbjct:    2 DAEGYDFLRQLHGLPRRHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMAQEF---------RRATRRPGSQPPXXXXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFL 328
[Close]
BLAST of Ec-00_005130.1 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 6.600e-32
Identity = 59/116 (50.86%), Postives = 87/116 (75.00%), Query Frame = 1 
Query: 1309 LIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSA 1656
            +I+ CG+L++N AFRHP+PDLSSF++KE   M +LP    RI  +   +++LPE+SK+VIL+F  +V  ++GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G S   + SA
Sbjct:    1 MIKKCGLLNSNQAFRHPIPDLSSFQDKERMAMPELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLGMSFVGALSA 116
The following BLAST results are available for this feature:
BLAST of Ec-00_005130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G0K2_ECTSI0.000e+0100.00Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A6H5KVY6_9PHAE0.000e+091.35Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZG7_ECTSI0.000e+083.21Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ... [more]
D7FZU5_ECTSI0.000e+084.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G5_ECTSI8.440e-28476.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFX7_9PHAE2.360e-26352.17Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FQM4_ECTSI1.090e-9946.62Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G3Y3_ECTSI1.030e-7045.70Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G6L7_ECTSI4.110e-6942.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2U9_ECTSI6.600e-3250.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:7840084..7844192 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1533.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G0K2
Length2334
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Gene idEc-00_005130.1
EggNOG free text desc.5'-3' exodeoxyribonuclease activity
EggNOG OGsCOG0258@1,KOG2518@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005130Ec-00_005130Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 7840084..7844192 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005130.1.1Ec-00_005130.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7840084..7840993 +
Ec-00_005130.1.2Ec-00_005130.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7841378..7841694 +
Ec-00_005130.1.3Ec-00_005130.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7842545..7842951 +
Ec-00_005130.1.4Ec-00_005130.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7843493..7844192 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005130.1CDS:Ec-00_005130.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 7840084..7840993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005130.1Ec-00_005130.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 7840084..7844192 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005130.1 ID=Ec-00_005130.1|Name=Ec-00_005130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=778bp
MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGC
PVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQD
IHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQ
PTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAII
VGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVE
SREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEIT
RHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQK
KRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLT
VPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAF
RHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFM
GEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASF
SADKEYRIRIKLRVEEVDESAPPTEQEEKEGEEEEEVVGNDPRSAQTLVA
LEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMA
CRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVH
ASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHE
RRSDHQEVCLDYLPPRVREENNSSHFA*
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spliced messenger RNA

>Ec-00_005130.1 ID=Ec-00_005130.1|Name=Ec-00_005130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2334bp|location=Sequence derived from alignment at chr_00:7840084..7844192+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTCTTTGAAGACCGCAATTTCCTAGTGACGGTAGTGTTCGACGG
TCGGCCGCCTCCGGCCAAGAGTGGGACATCTCAACACCGACGAGAAAGGA
GGCAGAAGAGTGCACAACAGGCGCGCGCTCTACACGACGCCGGTGGCTGT
CCCGTGGAGATCAACAAGTTGGCCAGCGCTGCTTGTGCTTTCGACGGTCG
AGTTACCGCTGAGATCGCAACGCGCTTGAGAGCCCGTATCAGGGGGGAGG
TTTACATCGCCCCAGGCGAAGCGGATCCACAGCTTGTAGTTTTCCAGGAC
ATCCATCTCGCAACAGGGGCGAACGTGTACGTGTATGCCAATGACTCCGA
CTTAACAGTTCTTGGGGTACGGGATCTTTTGGTGGAAGTGGTCAAGAACG
CGAGAGGAGAGCTTGTCGGAAGATGCGTCCGGCAGAGGCTGCTCTTCCAA
CCCACCGCATGGTCCTTCCTCCGGAGCGGGGATGCTCATGGTTGGCTGCG
CCAGCTGCACGGGATACACCAGCCAGTTGACGAGGGCTTAGACTACACGC
CTCTACCGGAACCGACCGCCCGCCGCCGCCTTCTCTTGTTCGCCATTATC
GTAGGCAACGACTTCGCGAAATTCAAAAATGTCGGACCAGTTACTGCTGC
AAGGCTAGCTTTCGTTGACACCGAAAGCGGTGTCTGGGCGGCATCTTTGC
TACCATTCGATGCGGTTGTGGGATACCTGGCCTCAAGGCTGCTGGTGGAG
TCCAGGGAGGAGGACACGCCTGCTGTGCGGCGTGAGTTTGAGATCCGACT
GCGCGCCTGCCACACCATGTTTACACAGCCCGTGGTGTGGAACCCGCTGA
GCGGAGAACTCCAACATTTGTCCGGCGCGCCGACCAGGGAGGAAATCACC
CGCCATGCAGGGACGTCGGAGCTATCCCCGCTGGCGTCCCGTGTGGCCCG
GAGAGATGCCTGTCCGCTGACCGGGCGCGAATGGGACCCACCGCTGGGTA
CAGCACAAGCGAAGGGGCAGGCGGTAGGCGAGGATGCTGGCAGGCAGAAG
AAAAGGGCAACACCCGAGACGGCTAGCACCCGCCCCCCGAATGCTAGCAG
CAGGGCGTCTCGCTCTCGAGGTCCTCAAGACACAAACAACTACCGCGAGC
ACGGCTTCAGCAGACTCCCGGCGGAAACTGAAGATTACACCAAGTTGACC
GTGCCTAAGCTTCGCGAGTTTCTAAGCGTTTTTAGGTGTCTCGACAACGC
CGGGACCAGTGGGTTCAACAAAGCACTCCTTGCTCAGATGGCTGGGGATG
TCGTCAGGCTGATAAGGAGCTGCGGTGTGTTGGACACCAACTTGGCGTTT
CGCCATCCCGTTCCGGACCTCAGCTCTTTTGAGGAAAAGGAGGCCAGGCT
AATGACGGATCTTCCTGCGACAGGGCTGCGCATAAAGGAGTGGTCCGCTA
TGCGGCGGTATCTCCCCGAGATATCGAAAGCCGTCATCTTACGGTTCATG
GGAGAAGTGAAGAAACTCGCCGGCGAGGGCTCGCGGCTCTGGTATAGATC
GGTGCAGCGGGTGTTGGACATGGGGAACCTCAGCAGGTTTTGGGCCGTTC
CGGCAGCGGGGGGCATTATGTGGATTGGGACTAGCGCGGGCGCCTCCTTC
TCGGCCGACAAGGAGTACCGCATCCGCATCAAACTACGAGTGGAAGAAGT
GGATGAGAGCGCACCCCCGACGGAGCAAGAGGAGAAGGAGGGGGAGGAAG
AGGAGGAGGTCGTGGGCAATGACCCGCGGTCGGCGCAAACCCTGGTAGCC
CTGGAGGTCATCGCGGCTCTCTGCGAATGTCCTGCGGGCATTAAGGGGGG
GTGCTCCCACGCCGCCATGGCGCTGTTTTTAGGTAGACTGCTCCAGATGT
CTGAAGAACAGCTAGCCACGTTCAATCCTACCACGTGTACGGGAATGGCA
TGCCGCTGGATAATGCAGCATGGCAAGGGTTCTCGATCGGCCAAACAGTG
CGAGCTATACGGCATGAGTATGTCGGTAGGAACCACGGTCGTCCGGAGTG
TTCGGGACCCGAAAGGGAATGTAGGATGGGACGACGACAAACAAGTCCAC
GCGAGTGGGGTTCCACCCATAGATCGAATGAACCAATTCAACCCGCATCC
TACCGGGGGAATGTGGGCCGCACGCAAAGTGCACTTCGATGCTGGCGAGG
ACATCAGCAAACTCAAGAGGGACAAATTAATGGCGTTCGTAAATCACGAG
AGGCGATCGGACCACCAAGAGGTGTGCCTGGATTATCTACCGCCAAGAGT
ACGCGAAGAAAACAATTCTTCACACTTTGCGTAG
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protein sequence of Ec-00_005130.1

>Ec-00_005130.1 ID=Ec-00_005130.1|Name=Ec-00_005130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=778bp
MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGC
PVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQD
IHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQ
PTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAII
VGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVE
SREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEIT
RHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQK
KRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLT
VPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAF
RHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFM
GEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASF
SADKEYRIRIKLRVEEVDESAPPTEQEEKEGEEEEEVVGNDPRSAQTLVA
LEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMA
CRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVH
ASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHE
RRSDHQEVCLDYLPPRVREENNSSHFA*
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mRNA from alignment at chr_00:7840084..7844192+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005130.1 ID=Ec-00_005130.1|Name=Ec-00_005130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4109bp|location=Sequence derived from alignment at chr_00:7840084..7844192+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGCTCTTTGAAGACCGCAATTTCCTAGTGACGGTAGTGTTCGACGG
TCGGCCGCCTCCGGCCAAGAGTGGGACATCTCAACACCGACGAGAAAGGA
GGCAGAAGAGTGCACAACAGGCGCGCGCTCTACACGACGCCGGTGGCTGT
CCCGTGGAGATCAACAAGTTGGCCAGCGCTGCTTGTGCTTTCGACGGTCG
AGTTACCGCTGAGATCGCAACGCGCTTGAGAGCCCGTATCAGGGGGGAGG
TTTACATCGCCCCAGGCGAAGCGGATCCACAGCTTGTAGTTTTCCAGGAC
ATCCATCTCGCAACAGGGGCGAACGTGTACGTGTATGCCAATGACTCCGA
CTTAACAGTTCTTGGGGTACGGGATCTTTTGGTGGAAGTGGTCAAGAACG
CGAGAGGAGAGCTTGTCGGAAGATGCGTCCGGCAGAGGCTGCTCTTCCAA
CCCACCGCATGGTCCTTCCTCCGGAGCGGGGATGCTCATGGTTGGCTGCG
CCAGCTGCACGGGATACACCAGCCAGTTGACGAGGGCTTAGACTACACGC
CTCTACCGGAACCGACCGCCCGCCGCCGCCTTCTCTTGTTCGCCATTATC
GTAGGCAACGACTTCGCGAAATTCAAAAATGTCGGACCAGTTACTGCTGC
AAGGCTAGCTTTCGTTGACACCGAAAGCGGTGTCTGGGCGGCATCTTTGC
TACCATTCGATGCGGTTGTGGGATACCTGGCCTCAAGGCTGCTGGTGGAG
TCCAGGGAGGAGGACACGCCTGCTGTGCGGCGTGAGTTTGAGATCCGACT
GCGCGCCTGCCACACCATGTTTACACAGCCCGTGGTGTGGAACCCGCTGA
GCGGAGAACTCCAACATTTGTCCGGCGCGCCGACCAGGGAGGAAATCACC
CGCCATGCAGGTCAGTGTTCCGCGTTTTTGTGTGTGTAAGAATGCTCCTC
GTACCTGAGACCAGCTTTTGGTTGATGTTTCCCGACGTCACCTTACTTGT
AGTCGGGCGCCAGCAGTGAGACCTTACACACTAGTAAAATGTGTCCTTTA
CACTGGAGTCTGCGTGCAGCAAGGAGGTCTGATGTACCTTCAAACATGCT
TTCTACAAAGTAGATTTGCAGGTAAACCCACCAATGACCTCGGTCTGGCT
TTGCTCGTCCCGTGATTACACGGCTCCCGCTGTACTGCATACTGTGTAAG
CCTGCTGTACTGAAGCAGATACATTTAGTGACGGCGTTGCATATACTATC
GCCTGAACTCCCTTCACTGTCATGCTCGCATCCTGCACGTACAGGGACGT
CGGAGCTATCCCCGCTGGCGTCCCGTGTGGCCCGGAGAGATGCCTGTCCG
CTGACCGGGCGCGAATGGGACCCACCGCTGGGTACAGCACAAGCGAAGGG
GCAGGCGGTAGGCGAGGATGCTGGCAGGCAGAAGAAAAGGGCAACACCCG
AGACGGCTAGCACCCGCCCCCCGAATGCTAGCAGCAGGGCGTCTCGCTCT
CGAGGTCCTCAAGACACAAACAACTACCGCGAGCACGGCTTCAGCAGACT
CCCGGCGGAAACTGAAGATTACACCAAGTTGACCGTGCCTAAGCTTCGCG
AGTTTCTAAGCGTGAGTAAAATATGGGTTTTTAGCGACATTTTTTCTAGA
GAGCTACTGTCAGTAGGGTACTAGTCGGGGAGGGTACTTACAGTTATGGC
TGTGACAGAATATTTGGTCCATAGACTATTACTACTTCAAAATATATTTT
GGGTAAAGAGTGCATCCTGTGTTGTAAACTTGGCGCTTCGTCTTTCAGAC
TGCCGTTACTGGCTTCCGGGTGCGCCTGTCGACCATCCAACAGCAGGTTG
AGCGATGTACGCACACACGCTTACAAAAGAGACCACACACCACGTTCCGC
TTTGCACACAGCGCACTGCGGCTGCTGTTAGTAAGGTTCGGGGCGGATAT
CCCGATTGGTTTAAGAAGTAATGTTTTTGAAATAGCCCCAAAATGGTACC
CCACAAGTTATCACAAGTTGTGCGATTTTGGACTGTAGTTAAATTGTTCG
CGTACGGTGGGCCACGCTCAGAGCAGATTAAGTACACCATTGGCGCCGGA
TATGTGCAATTCAGCCCCCCTCGCAGTATGTTTACGGTAATGGTCACGTT
GACCACAAGTCAGATATTGATGTCCGTCAACCACTTCGTTACAGCAGTCG
TTCGAACACGGGATTATTGTGCGTAGGGTAACAACGAACCTACAAGTTTT
GGTTTCTTCGCGTTCTGTTCGAGGCAGCGGTGGGGTACGAGATGCACGCG
GCAACTGCACGTGGAGATTGCAAATTGTAACCGAAGATATACATTGTTCT
TCGCCTAAGATAAGCGGGTGGGTTTCGGTGTGCGTCATCAGCTAAGCATG
AACGTATATGCGCCCCACACGCTTGGGATTCTCCTCTTGTCGTGTGCATT
TCTGCCGTCAGGTTTTTAGGTGTCTCGACAACGCCGGGACCAGTGGGTTC
AACAAAGCACTCCTTGCTCAGATGGCTGGGGATGTCGTCAGGCTGATAAG
GAGCTGCGGTGTGTTGGACACCAACTTGGCGTTTCGCCATCCCGTTCCGG
ACCTCAGCTCTTTTGAGGAAAAGGAGGCCAGGCTAATGACGGATCTTCCT
GCGACAGGGCTGCGCATAAAGGAGTGGTCCGCTATGCGGCGGTATCTCCC
CGAGATATCGAAAGCCGTCATCTTACGGTTCATGGGAGAAGTGAAGAAAC
TCGCCGGCGAGGGCTCGCGGCTCTGGTATAGATCGGTGCAGCGGGTGTTG
GACATGGGGAACCTCAGCAGGTTTTGGGCCGTTCCGGCAGCGGGGGGCAT
TATGTGGATTGGGACTAGGTGAGGCGCACGAAATGCACCCCGCCTGGAAG
GAGGATAGGCATATACTGCTTCGCGTTGCCGTCATATTGTTTCCGGTGTG
TGTTCTAACGTTGTTATGTTTTGATGTTCGGATTACTTAGATGGAGTATG
CTTGATCTAGTCCCGACGTACGATTCGACGGTGACAGCGCAGCATATTGC
CACCCGGGTCTGTGTGCATTATGCGCACACGTACTTTCCGTTGCATTCGT
GCTTTTCTGCCTTGACCATGTTTATAACCGTGTAGATGTTCCCGTCGGAA
TGACGCTGATGCCAGCATCGTACACAAAACAAGTTACCCTCTACGATACT
CGAGGGACAGACCCGGTCCCCCACGTGTTCTTGCCTTGCTTTCCCCGCAC
GTCATGACGGCGCGGTACGCTGCATTTCGTTGACTTTGTTTTCGATCGTT
GCCTGCTCCGTCAGCAACGTTGTAGTGGAGATTAAAAACTCGAAAATGAA
AGACTGCGCCTAACAACCTTCCCATCCCGATGAAATCATCTCCAACTGAT
AACACACAGCGCGGGCGCCTCCTTCTCGGCCGACAAGGAGTACCGCATCC
GCATCAAACTACGAGTGGAAGAAGTGGATGAGAGCGCACCCCCGACGGAG
CAAGAGGAGAAGGAGGGGGAGGAAGAGGAGGAGGTCGTGGGCAATGACCC
GCGGTCGGCGCAAACCCTGGTAGCCCTGGAGGTCATCGCGGCTCTCTGCG
AATGTCCTGCGGGCATTAAGGGGGGGTGCTCCCACGCCGCCATGGCGCTG
TTTTTAGGTAGACTGCTCCAGATGTCTGAAGAACAGCTAGCCACGTTCAA
TCCTACCACGTGTACGGGAATGGCATGCCGCTGGATAATGCAGCATGGCA
AGGGTTCTCGATCGGCCAAACAGTGCGAGCTATACGGCATGAGTATGTCG
GTAGGAACCACGGTCGTCCGGAGTGTTCGGGACCCGAAAGGGAATGTAGG
ATGGGACGACGACAAACAAGTCCACGCGAGTGGGGTTCCACCCATAGATC
GAATGAACCAATTCAACCCGCATCCTACCGGGGGAATGTGGGCCGCACGC
AAAGTGCACTTCGATGCTGGCGAGGACATCAGCAAACTCAAGAGGGACAA
ATTAATGGCGTTCGTAAATCACGAGAGGCGATCGGACCACCAAGAGGTGT
GCCTGGATTATCTACCGCCAAGAGTACGCGAAGAAAACAATTCTTCACAC
TTTGCGTAG
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Coding sequence (CDS) from alignment at chr_00:7840084..7844192+

>Ec-00_005130.1 ID=Ec-00_005130.1|Name=Ec-00_005130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2334bp|location=Sequence derived from alignment at chr_00:7840084..7844192+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGCTCTTTGAAGACCGCAATTTCCTAGTGACGGTAGTGTTCGACGG
TCGGCCGCCTCCGGCCAAGAGTGGGACATCTCAACACCGACGAGAAAGGA
GGCAGAAGAGTGCACAACAGGCGCGCGCTCTACACGACGCCGGTGGCTGT
CCCGTGGAGATCAACAAGTTGGCCAGCGCTGCTTGTGCTTTCGACGGTCG
AGTTACCGCTGAGATCGCAACGCGCTTGAGAGCCCGTATCAGGGGGGAGG
TTTACATCGCCCCAGGCGAAGCGGATCCACAGCTTGTAGTTTTCCAGGAC
ATCCATCTCGCAACAGGGGCGAACGTGTACGTGTATGCCAATGACTCCGA
CTTAACAGTTCTTGGGGTACGGGATCTTTTGGTGGAAGTGGTCAAGAACG
CGAGAGGAGAGCTTGTCGGAAGATGCGTCCGGCAGAGGCTGCTCTTCCAA
CCCACCGCATGGTCCTTCCTCCGGAGCGGGGATGCTCATGGTTGGCTGCG
CCAGCTGCACGGGATACACCAGCCAGTTGACGAGGGCTTAGACTACACGC
CTCTACCGGAACCGACCGCCCGCCGCCGCCTTCTCTTGTTCGCCATTATC
GTAGGCAACGACTTCGCGAAATTCAAAAATGTCGGACCAGTTACTGCTGC
AAGGCTAGCTTTCGTTGACACCGAAAGCGGTGTCTGGGCGGCATCTTTGC
TACCATTCGATGCGGTTGTGGGATACCTGGCCTCAAGGCTGCTGGTGGAG
TCCAGGGAGGAGGACACGCCTGCTGTGCGGCGTGAGTTTGAGATCCGACT
GCGCGCCTGCCACACCATGTTTACACAGCCCGTGGTGTGGAACCCGCTGA
GCGGAGAACTCCAACATTTGTCCGGCGCGCCGACCAGGGAGGAAATCACC
CGCCATGCAGGGACGTCGGAGCTATCCCCGCTGGCGTCCCGTGTGGCCCG
GAGAGATGCCTGTCCGCTGACCGGGCGCGAATGGGACCCACCGCTGGGTA
CAGCACAAGCGAAGGGGCAGGCGGTAGGCGAGGATGCTGGCAGGCAGAAG
AAAAGGGCAACACCCGAGACGGCTAGCACCCGCCCCCCGAATGCTAGCAG
CAGGGCGTCTCGCTCTCGAGGTCCTCAAGACACAAACAACTACCGCGAGC
ACGGCTTCAGCAGACTCCCGGCGGAAACTGAAGATTACACCAAGTTGACC
GTGCCTAAGCTTCGCGAGTTTCTAAGCGTTTTTAGGTGTCTCGACAACGC
CGGGACCAGTGGGTTCAACAAAGCACTCCTTGCTCAGATGGCTGGGGATG
TCGTCAGGCTGATAAGGAGCTGCGGTGTGTTGGACACCAACTTGGCGTTT
CGCCATCCCGTTCCGGACCTCAGCTCTTTTGAGGAAAAGGAGGCCAGGCT
AATGACGGATCTTCCTGCGACAGGGCTGCGCATAAAGGAGTGGTCCGCTA
TGCGGCGGTATCTCCCCGAGATATCGAAAGCCGTCATCTTACGGTTCATG
GGAGAAGTGAAGAAACTCGCCGGCGAGGGCTCGCGGCTCTGGTATAGATC
GGTGCAGCGGGTGTTGGACATGGGGAACCTCAGCAGGTTTTGGGCCGTTC
CGGCAGCGGGGGGCATTATGTGGATTGGGACTAGCGCGGGCGCCTCCTTC
TCGGCCGACAAGGAGTACCGCATCCGCATCAAACTACGAGTGGAAGAAGT
GGATGAGAGCGCACCCCCGACGGAGCAAGAGGAGAAGGAGGGGGAGGAAG
AGGAGGAGGTCGTGGGCAATGACCCGCGGTCGGCGCAAACCCTGGTAGCC
CTGGAGGTCATCGCGGCTCTCTGCGAATGTCCTGCGGGCATTAAGGGGGG
GTGCTCCCACGCCGCCATGGCGCTGTTTTTAGGTAGACTGCTCCAGATGT
CTGAAGAACAGCTAGCCACGTTCAATCCTACCACGTGTACGGGAATGGCA
TGCCGCTGGATAATGCAGCATGGCAAGGGTTCTCGATCGGCCAAACAGTG
CGAGCTATACGGCATGAGTATGTCGGTAGGAACCACGGTCGTCCGGAGTG
TTCGGGACCCGAAAGGGAATGTAGGATGGGACGACGACAAACAAGTCCAC
GCGAGTGGGGTTCCACCCATAGATCGAATGAACCAATTCAACCCGCATCC
TACCGGGGGAATGTGGGCCGCACGCAAAGTGCACTTCGATGCTGGCGAGG
ACATCAGCAAACTCAAGAGGGACAAATTAATGGCGTTCGTAAATCACGAG
AGGCGATCGGACCACCAAGAGGTGTGCCTGGATTATCTACCGCCAAGAGT
ACGCGAAGAAAACAATTCTTCACACTTTGCGTAG
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Synonyms
The feature 'Ec-00_005130.1' has the following synonyms
Synonym
Esi0407_0030
Esi_0407_0030