Ec-00_004910.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_004910.3
Unique NameEc-00_004910.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length440
Homology
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5KBV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBV3_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 1.560e-136
Identity = 279/503 (55.47%), Postives = 287/503 (57.06%), Query Frame = 3 
Query:  717 LSCAAWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGRGRGGVGGRVPVRGGVQPSPGTGVGALNANGGRGGGRPARTLSXXXXXXASVGAHRPGRGDSQXXXXXXXXXXXXXXXXXXXXXXXAGGAGPAATASGRGRGGVQSSPG----------------------------TRVGALNTSGGRGVGRPARTRTTLNRRCSACGTLPLYGNQKKRLCLEDRCPRWACRARCYHGFNKDLQQKCCECHKSIKTWCECKSCSRKTRAVPPANRVSRGTGLVAGLGGGRGRGAPRHVPVSVIRLPAADNAVNTTVGMHRCEPKLGSDDGATESCANSDEPEAFTAEQLL*VRVPQMLLYQRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLLGMVAEAKDIGVHPVVQLGEWGYAVSERRSRTCELDWAHVKYDKG 2141
            LSCAAWGPGPVGGGIQESGSA+SALSG RGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGR RGGVGGRVPVRGGVQPS GTGVGALNANGGRG GRPARTL XXXXXX            SQ                       AGGAGPA                                            T VGA N SGGRGVGRPARTRTTLNRR                             ARCYHGFNKDLQQKCCECHKSIKTWCECK                                                                                              +MLL+QRSVSQTAGANAGVQSATGA CEHA ASLE L KNTVVDATPIFF+GINGCPYAGLTACIS ARAKAFLSEVEETLL+GM AEAKDIGV+PVVQLGEWGYAVSERRSRTCELDWAHVKY++G
Sbjct:    9 LSCAAWGPGPVGGGIQESGSAVSALSGCRGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGRARGGVGGRVPVRGGVQPSQGTGVGALNANGGRGCGRPARTLXXXXXXXXXXXXXXXXXXXSQ-----------------------AGGAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVGAHNASGGRGVGRPARTRTTLNRR-----------------------------ARCYHGFNKDLQQKCCECHKSIKTWCECK----------------------------------------------------------------------------------------------RMLLHQRSVSQTAGANAGVQSATGASCEHATASLETLGKNTVVDATPIFFDGINGCPYAGLTACISPARAKAFLSEVEETLLVGMGAEAKDIGVYPVVQLGEWGYAVSERRSRTCELDWAHVKYEQG 365
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5JW51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW51_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 2.960e-114
Identity = 224/407 (55.04%), Postives = 230/407 (56.51%), Query Frame = 3 
Query:  930 VRGGVQPSPGTGVGALNANGGRGGGRPARTLSXXXXXXASVGAHRPGRGDSQXXXXXXXXXXXXXXXXXXXXXXXAGGAGPAATASGRGRGGVQSSPGTRVGALNTSGGRGVGRPARTRTTLNRRCSACGTLPLYGNQKKRLCLEDRCPRWACRARCYHGFNKDLQQKCCECHKSIKTWCECKSCS-RKTRAVPPANRVSRGTGLVAGLGGGRGRGAPRHVPVSVIRLPAADNAVNTTVGMHRCEPKLGSDDGATESCANSDEPEAFTAEQLL*VRVPQMLLYQRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLLGMVAEAKDIGVHPVVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG 2147
            +R GVQPSPGTGVGALNANGGRGGGRPARTL XXXXXX            SQ                       AGGAGPAA A+GRGR                       RPARTRTTLNRRCSACG LP YGNQKKRLCLEDRC RWACRARCYHGFNKDLQQKCCECHKSIKTWCECKS    K R    A RV R                                                                                                    GAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAK FLSEV+ETLL+GMVAEAKD+GV+ VVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG
Sbjct:    1 MRSGVQPSPGTGVGALNANGGRGGGRPARTLXXXXXXXXXXXXXXXXXXXSQ-----------------------AGGAGPAAPANGRGRXXXXXXXXXXXXXXXXXXXXXXXRPARTRTTLNRRCSACGALPSYGNQKKRLCLEDRCRRWACRARCYHGFNKDLQQKCCECHKSIKTWCECKSDRLAKQRGPTLAFRVLR----------------------------------------------------------------------------------------------------GAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKTFLSEVKETLLVGMVAEAKDVGVYQVVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG 284
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5KTH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH3_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 7.760e-70
Identity = 177/314 (56.37%), Postives = 186/314 (59.24%), Query Frame = 3 
Query:  423 GTMQGGMVNHRSAELASSTANVAQQPGSSEASATPLSAPRTTASGVXXXXXXXXXXXXXXXXXXXASLQXXXXXXXXXXXXXXXXXXXXXXXXXXQDTLS---CAAWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGRGRGGVGGRVPVRGGVQPSPGTGVGALNANGGRGGGRPARTLSXXXXXXASVGAHRPGRGDSQXXXXXXXXXXXXXXXXXXXXXXXAGGAGPAATASGRGRGGVQSSPGTRVGALNTSGGRGVGRPARTRTTLNRRCSACGTLPLYGNQKKRL 1355
            G +QGG VNHRS EL SSTA++ QQPGS+EASA PL APRTTASGV                                                 QDTLS   CAAWGPGPVGGGI+ESGSA+S LSG RGSGVGVSVGG+VLGWGGSQAGGAGPAAAVSGR +GGVGGRVPVR GVQPSPGTGVGALNANGGRGGGRPARTL XXXXXX            SQ                       AGGAGPAA A+GRGR                       RPARTRTTLNRRCS C  LP YGNQKK L
Sbjct:    7 GLVQGGTVNHRSTEL-SSTASLVQQPGSNEASAPPLPAPRTTASGVGLMQ---------------------------------------------QDTLSALSCAAWGPGPVGGGIEESGSAVSTLSGSRGSGVGVSVGGNVLGWGGSQAGGAGPAAAVSGRAKGGVGGRVPVRSGVQPSPGTGVGALNANGGRGGGRPARTLXXXXXXXXXXXXXXXXXXXSQ-----------------------AGGAGPAAPANGRGRXXXXXXXXXXXXXXXXXXXXXXXRPARTRTTLNRRCSVCCALPSYGNQKKTL 251
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.910e-55
Identity = 107/110 (97.27%), Postives = 110/110 (100.00%), Query Frame = 3 
Query: 1764 MLLYQRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLLGMVAEAKDIGVHPVVQLGEWGYAVSERR 2093
            MLL+QRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLL+GMVAEAKDIGV+PVVQLGEWGYAVSERR
Sbjct:    1 MLLHQRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLVGMVAEAKDIGVYPVVQLGEWGYAVSERR 110
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5L044_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L044_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 6.650e-51
Identity = 103/125 (82.40%), Postives = 109/125 (87.20%), Query Frame = -2 
Query:  958 IKAMYHTRSTGGLVWSLSAQVCQLLCHHWY*GHQLSFLVRIAHRLSRGRSLLQRDQPPLLGYRPAQDVGRRRWHHYLYHRSEFXXXXXXXXXXXXXXXXXXXXXECAQVCHLLCRRWR*GHQLPF 1332
            +KAM+HTRSTGGLVWSLSA VC+LLCH W+ GHQL FLVR+AHRLSRG SL+QRDQPPLLGYRPAQDVGRRR HH LYHRSEFXXXXXXXXXXXXXX       ECAQVCHLLCRRWR GHQLP 
Sbjct:    1 MKAMHHTRSTGGLVWSLSAPVCRLLCHRWHYGHQLPFLVRVAHRLSRGHSLVQRDQPPLLGYRPAQDVGRRRRHH-LYHRSEFXXXXXXXXXXXXXXPYLYNRSECAQVCHLLCRRWREGHQLPL 124
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5JPW5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.050e-50
Identity = 107/125 (85.60%), Postives = 108/125 (86.40%), Query Frame = 3 
Query:  708 QDTLS---CAAWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGRGRGGVGGRVPVRGGVQPSPGTGVGALNANGGRGGGRPARTLSXXXXXXASVGAHRPGR 1073
            QDTLS   CAAWGPGPVGGGIQESGSA+ ALSGGRGSGVGVSVGGHVLGWGG QAGGAGPAAAVSGR RGGVGGRVPVRGGVQPSPGTGVG LNANGG GG RPARTLS      A VG HRPGR
Sbjct:    3 QDTLSALSCAAWGPGPVGGGIQESGSAVCALSGGRGSGVGVSVGGHVLGWGGIQAGGAGPAAAVSGRARGGVGGRVPVRGGVQPSPGTGVGTLNANGGSGGCRPARTLSGGRGSGAGVGGHRPGR 127
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5JPP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP3_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 7.400e-50
Identity = 101/111 (90.99%), Postives = 107/111 (96.40%), Query Frame = 3 
Query: 1764 MLLYQRSVSQTAGANAGVQSATGAICEHAAASLEALDKNTVVDATPIFFNGINGCPYAGLTACISQARAKAFLSEVEETLLLGMVAEAKDIGVHPVVQLGEWGYAVSERRS 2096
            M L QRSVS+TAGANAGVQSATG ICEHAAASLEALDKNTVV+ATPIFFNGINGCP+AGLTACISQARAKAFLSEVEETLLLGMVAEAKD+GV+PVVQL +WGYAVSERRS
Sbjct:    1 MRLRQRSVSRTAGANAGVQSATGGICEHAAASLEALDKNTVVNATPIFFNGINGCPHAGLTACISQARAKAFLSEVEETLLLGMVAEAKDVGVYPVVQLSKWGYAVSERRS 111
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BLAST of Ec-00_004910.3 vs. uniprot
Match: D7FZU4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZU4_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 4.730e-30
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 2 
Query: 1379 MGVQGALLPRVQQGSPTEVLRVPQKHQDVVRVQKLLKENTGGATSQPGIKGYGFGRRIRGR 1561
            MGVQGALLPRVQQGSPTEVLRVPQKHQDVVRVQKLLKENTGGATSQPGIKGYGFGRRIRGR
Sbjct:    1 MGVQGALLPRVQQGSPTEVLRVPQKHQDVVRVQKLLKENTGGATSQPGIKGYGFGRRIRGR 61
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BLAST of Ec-00_004910.3 vs. uniprot
Match: A0A6H5L7G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G6_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.620e-28
Identity = 83/111 (74.77%), Postives = 86/111 (77.48%), Query Frame = 3 
Query:  708 QDTLS---CAAWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGPAAAVSGRGRGGVGGRVPV---RGGVQPSPGTGVGALNANGGRGGGRPARTL 1022
            QDTLS   CAAWGPGPVGGGIQESGSAMSALSGGRGS VGVSVGGHVLGWGGSQAGG G +   S R + G   R      R   QPSPG+GV ALNANGGRGGGRPARTL
Sbjct:    3 QDTLSALSCAAWGPGPVGGGIQESGSAMSALSGGRGSSVGVSVGGHVLGWGGSQAGG-GWSRCCSERPQEGWCRRPSPCVGRCATQPSPGSGVCALNANGGRGGGRPARTL 112
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BLAST of Ec-00_004910.3 vs. uniprot
Match: D7G6G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G0_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.170e-21
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 
Query: 2013 MVAEAKDIGVHPVVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG 2147
            MVAEAKDIGVHPVVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG
Sbjct:    1 MVAEAKDIGVHPVVQLGEWGYAVSERRSRTCELDWAHVKYDKGDG 45
The following BLAST results are available for this feature:
BLAST of Ec-00_004910.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KBV3_9PHAE1.560e-13655.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW51_9PHAE2.960e-11455.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTH3_9PHAE7.760e-7056.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWX4_9PHAE2.910e-5597.27CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L044_9PHAE6.650e-5182.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPW5_9PHAE1.050e-5085.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP3_9PHAE7.400e-5090.99Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZU4_ECTSI4.730e-30100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L7G6_9PHAE1.620e-2874.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6G0_ECTSI1.170e-21100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:7075789..7078929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2171
Hectar predicted targeting categoryother localisation
Gene idEc-00_004910.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004910Ec-00_004910Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 7075728..7080398 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004910.3Ec-00_004910.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 7076466..7078040 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004910.3.4Ec-00_004910.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7075789..7076194 -
Ec-00_004910.3.3Ec-00_004910.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7076451..7076733 -
Ec-00_004910.3.2Ec-00_004910.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7076989..7078112 -
Ec-00_004910.3.1Ec-00_004910.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7078572..7078929 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0049103UTR:Ec-00_004910.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 7075789..7076194 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004910.3CDS:Ec-00_004910.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 7076466..7076733 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0049105UTR:Ec-00_004910.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 7078041..7078112 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_004910.3 ID=Ec-00_004910.3|Name=Ec-00_004910.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=440bp
MQGGMVNHRSAELASSTANVAQQPGSSEASATPLSAPRTTASGVGLMQGG
MVNHRSAELASSTASLQQPGPSEASAPPLPAPRTTASGVGLMQQDTLSCA
AWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGP
AAAVSGRGRGGVGGRVPVRGGVQPSPGTGVGALNANGGRGGGRPARTLSG
GRGGGASVGAHRPGRGDSQTLSGGRGSGASVGGQRPGRGGSQAGGAGPAA
TASGRGRGGVQSSPGTRVGALNTSGGRGVGRPARTRTTLNRRCSACGTLP
LYGNQKKRLCLEDRCPRWACRARCYHGFNKDLQQKCCECHKSIKTWCECK
SCSRKTRAVPPANRVSRGTGLVAGLGGGRGRGAPRHVPVSVIRLPAADNA
VNTTVGMHRCEPKLGSDDGATESCANSDEPEAFTAEQLL*
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spliced messenger RNA

>Ec-00_004910.3 ID=Ec-00_004910.3|Name=Ec-00_004910.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2171bp|location=Sequence derived from alignment at chr_00:7075789..7078929- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGACACCCAAGAAGACAAAACATGAATCGATGGCCTAGAGGACGAGAGCT
GGATAGTTTTGTACTCACGTGCCCTCTCAAGCGGTCAACTTTTTGCCGTT
GGGAAGCGCTGACGCACGTTTTGGTCTCTTTTTGACACCGAGAACATTTT
TTCTCGCACCCCCGGAGCGCTATCGCCACATGTTGGCGGGCACAGCATCA
GTGCATCAAGGGTTGTGGGGAGCCCTTTGCGAACTCGTTACATTCAGTTT
CCATGACGCATTTGTGGTTTATCTGTCACAAATCGTTTGGTAGCAGTAGA
CCACGATTCCCGCCGCACGTGCGATGCATTTGAGAAAACCAACGATAAAG
ATTTTTTTCAGCCAGGATCCAGTGAAGCATCAGCAACTCCTCTGCCTGCT
CCAAGAACAACAGCGAGCGGTGTGGGACTCATGCAAGGAGGGATGGTCAA
CCACCGTAGCGCAGAACTTGCGTCTAGCACTGCCAATGTAGCACAGCAGC
CAGGATCCAGTGAAGCATCAGCAACTCCTCTGTCTGCTCCAAGAACAACA
GCGAGCGGTGTGGGACTCATGCAAGGAGGGATGGTCAACCACCGTAGCGC
AGAACTTGCGTCTAGCACTGCCAGTTTACAGCAGCCAGGACCCAGTGAAG
CATCAGCACCTCCTCTGCCTGCTCCAAGAACAACAGCGAGCGGTGTGGGA
CTCATGCAGCAGGACACGCTATCTTGCGCAGCTTGGGGTCCAGGTCCTGT
GGGGGGTGGTATCCAAGAAAGTGGGTCTGCTATGAGCGCTCTGAGCGGTG
GTAGAGGCAGTGGTGTCGGCGTCAGCGTCGGCGGTCACGTTCTTGGGTGG
GGTGGTAGCCAAGCAGGGGGGGCTGGTCCCGCTGCTGCAGTGAGCGGCCG
CGGGAGGGGTGGTGTCGGCGGTCGAGTCCCTGTGCGGGGCGGTGTGCAAC
CCTCACCAGGAACGGGAGTTGGTGCCCTTAACGCCAACGGCGGCAGAGGA
GGTGGCAGACCTGCGCGCACTCTGAGCGGTGGTAGAGGTGGTGGTGCCAG
TGTCGGCGCTCATCGTCCTGGGCGGGGCGATAGCCAAACTCTGAGCGGTG
GTAGAGGTAGTGGTGCCAGCGTCGGCGGCCAACGTCCTGGGCGGGGCGGT
AGCCAAGCAGGGGGGGCTGGTCCCGCTGCAACAGCGAGCGGCCGCGGGAG
AGGCGGTGTGCAATCCTCACCAGGAACGAGAGTTGGTGCCCTTAATACCA
GTGGTGGCAGAGGAGTTGGCAGACCTGCGCGGACAAGGACCACACTAAAC
CGCCGGTGCTCCGCGTGTGGTACATTGCCTTTATACGGAAACCAGAAAAA
GAGACTCTGTCTGGAGGATAGGTGCCCGCGATGGGCGTGCAGGGCGCGCT
GCTACCACGGGTTCAACAAGGATCTCCAACAGAAGTGCTGCGAGTGCCAC
AAAAGCATCAAGACGTGGTGCGAGTGCAAAAGCTGCTCAAGGAAAACACG
GGCGGTGCCACCAGCCAACCGGGTATCAAGGGGTACGGGTTTGGTCGCCG
GATTAGGGGGCGGTAGGGGACGAGGAGCTCCGCGGCATGTACCCGTGAGC
GTGATACGCTTGCCTGCAGCGGATAATGCCGTAAACACCACGGTCGGTAT
GCATCGCTGCGAACCAAAACTGGGTAGTGACGACGGTGCGACGGAATCCT
GCGCCAACAGCGACGAACCCGAAGCCTTCACCGCGGAGCAGCTGCTCTAG
GTTAGAGTGCCACACGATGCTTCTTTATCAGCGATCGGTTAGCCAAACAG
CGGGGGCCAACGCTGGCGTTCAGAGTGCTACGGGGGCCATTTGCGAGCAC
GCCGCTGCGTCGTTGGAGGCGCTTGACAAGAACACGGTGGTGGACGCGAC
GCCTATCTTTTTCAACGGCATCAACGGATGTCCGTACGCCGGTTTGACCG
CGTGTATCTCGCAAGCCCGAGCTAAAGCGTTCTTGTCGGAAGTCGAAGAA
ACGTTGTTGTTGGGGATGGTGGCGGAAGCAAAAGACATCGGCGTGCACCC
AGTCGTCCAACTAGGCGAGTGGGGATACGCCGTGAGCGAGAGGCGGAGTA
GAACTTGCGAACTGGACTGGGCCCATGTGAAGTACGACAAGGGTGACGGC
AAGGGCAAGGGCAAGGGCAAG
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protein sequence of Ec-00_004910.3

>Ec-00_004910.3 ID=Ec-00_004910.3|Name=Ec-00_004910.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=440bp
MQGGMVNHRSAELASSTANVAQQPGSSEASATPLSAPRTTASGVGLMQGG
MVNHRSAELASSTASLQQPGPSEASAPPLPAPRTTASGVGLMQQDTLSCA
AWGPGPVGGGIQESGSAMSALSGGRGSGVGVSVGGHVLGWGGSQAGGAGP
AAAVSGRGRGGVGGRVPVRGGVQPSPGTGVGALNANGGRGGGRPARTLSG
GRGGGASVGAHRPGRGDSQTLSGGRGSGASVGGQRPGRGGSQAGGAGPAA
TASGRGRGGVQSSPGTRVGALNTSGGRGVGRPARTRTTLNRRCSACGTLP
LYGNQKKRLCLEDRCPRWACRARCYHGFNKDLQQKCCECHKSIKTWCECK
SCSRKTRAVPPANRVSRGTGLVAGLGGGRGRGAPRHVPVSVIRLPAADNA
VNTTVGMHRCEPKLGSDDGATESCANSDEPEAFTAEQLL*
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mRNA from alignment at chr_00:7075789..7078929-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_004910.3 ID=Ec-00_004910.3|Name=Ec-00_004910.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3141bp|location=Sequence derived from alignment at chr_00:7075789..7078929- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGACACCCAAGAAGACAAAACATGAATCGATGGCCTAGAGGACGAGAGCT
GGATAGTTTTGTACTCACGTGCCCTCTCAAGCGGTCAACTTTTTGCCGTT
GGGAAGCGCTGACGCACGTTTTGGTCTCTTTTTGACACCGAGAACATTTT
TTCTCGCACCCCCGGAGCGCTATCGCCACATGTTGGCGGGCACAGCATCA
GTGCATCAAGGGTTGTGGGGAGCCCTTTGCGAACTCGTTACATTCAGTTT
CCATGACGCATTTGTGGTTTATCTGTCACAAATCGTTTGGTAGCAGTAGA
CCACGATTCCCGCCGCACGTGCGATGCATTTGAGAAAACCAACGATAAAG
ATTTTTTTGCCCATAAAAACGGTACTCAAATGTTTGGGTGCGGTAGCCCG
TCAGAGGCCGAAAGAGAAAGAAGGTTGACTCAAGACCTTGGTTGATTAGA
GAGTGAGAGACATGCGGTAGGCAACACCATCGCCATGCAGCATGCCCATC
AACACATTTCATCCGCGTACCCCCCGGAGGCCCCGTAGACAGTATACTCT
GCCGAGCACCCCAAACAGCCCCCCTGCTCCAGCAGTCTTCACGAGCAAAA
AAAAATTGGCACTACAAACGTATGGGCTACAATATGGAAATGTATTAGCA
GTCCAGCCAATCACCGACGCCCCTGAAGACCGACGGCACACGGGACTGTA
TCTGTGTTAGCATGCTCTACGCTCGAACACACAGGAGTACCGGAGTGCTC
TACGCCGCCGATGCATGGAAACCACCGTAGCGCCGAACTTGCGTCTAGCA
CTGCCAATGTAGCACAGCAGCCAGGATCCAGTGAAGCATCAGCAACTCCT
CTGCCTGCTCCAAGAACAACAGCGAGCGGTGTGGGACTCATGCAAGGAGG
GATGGTCAACCACCGTAGCGCAGAACTTGCGTCTAGCACTGCCAATGTAG
CACAGCAGCCAGGATCCAGTGAAGCATCAGCAACTCCTCTGTCTGCTCCA
AGAACAACAGCGAGCGGTGTGGGACTCATGCAAGGAGGGATGGTCAACCA
CCGTAGCGCAGAACTTGCGTCTAGCACTGCCAGTTTACAGCAGCCAGGAC
CCAGTGAAGCATCAGCACCTCCTCTGCCTGCTCCAAGAACAACAGCGAGC
GGTGTGGGACTCATGCAGCAGGACACGCTATCTTGCGCAGCTTGGGGTCC
AGGTCCTGTGGGGGGTGGTATCCAAGAAAGTGGGTCTGCTATGAGCGCTC
TGAGCGGTGGTAGAGGCAGTGGTGTCGGCGTCAGCGTCGGCGGTCACGTT
CTTGGGTGGGGTGGTAGCCAAGCAGGGGGGGCTGGTCCCGCTGCTGCAGT
GAGCGGCCGCGGGAGGGGTGGTGTCGGCGGTCGAGTCCCTGTGCGGGGCG
GTGTGCAACCCTCACCAGGAACGGGAGTTGGTGCCCTTAACGCCAACGGC
GGCAGAGGAGGTGGCAGACCTGCGCGCACTCTGAGCGGTGGTAGAGGTGG
TGGTGCCAGTGTCGGCGCTCATCGTCCTGGGCGGGGCGATAGCCAAACTC
TGAGCGGTGGTAGAGGTAGTGGTGCCAGCGTCGGCGGCCAACGTCCTGGG
CGGGGCGGTAGCCAAGCAGGGGGGGCTGGTCCCGCTGCAACAGCGAGCGG
CCGCGGGAGAGGCGGTGTGCAATCCTCACCAGGAACGAGAGTTGGTGCCC
TTAATACCAGTGGTGGCAGAGGAGTTGGCAGACCTGCGCGGACAAGGACC
ACACTAAACCGCCGGTGCTCCGCGTGTGGTACATTGCCTTTATACGGAAA
CCAGAAAAAGAGACTCTGTCTGGAGGATAGGTGCCCGCGATGGGCGTGCA
GGGCGCGCTGCTACCACGGGTTCAACAAGGATCTCCAACAGAAGTGCTGC
GAGTGCCACAAAAGCATCAAGACGTGGTGCGAGTGCAAAAGGTGAGCCTG
TTCCTTTCTTTTGTCATATACCGTCTCCCTCTTTCGAGCAGGTCGGTCTT
CCCTTCTTGCGTCATGTTTTCGCCGCGACCTATAGATGAAGATTTAGCTT
GTGGGTTCGACCCCCGAAACCCTCGCAAACCCGGGCACGGGACACGTTAC
CTATGTAGGCCTCTCGCTCGCAACATGTGTCTCGAAAGTAAATCCGACCT
CCCCATTGCCTACAATTGTCACCGTTGCGCCGTTCCATCTAACCAGCTGC
TCAAGGAAAACACGGGCGGTGCCACCAGCCAACCGGGTATCAAGGGGTAC
GGGTTTGGTCGCCGGATTAGGGGGCGGTAGGGGACGAGGAGCTCCGCGGC
ATGTACCCGTGAGCGTGATACGCTTGCCTGCAGCGGATAATGCCGTAAAC
ACCACGGTCGGTATGCATCGCTGCGAACCAAAACTGGGTAGTGACGACGG
TGCGACGGAATCCTGCGCCAACAGCGACGAACCCGAAGCCTTCACCGCGG
AGCAGCTGCTCTAGGTTAGAGTGCCACACGTGAGCGAACCATGAGATACA
GGGTGTGACCGGTTAGCCATGTCAAGCAGGGTGTGCCCAGTGCTCGCTTG
CTGTTATTTGTTGTTGGTTGGGTCATGCGAAATGGTGCACGAAGCACCAG
GTCGAAGCTCCTTGAAGTACTGGCCGGTCCGATTATTGCTGTTTTCAGAT
GGGTTTCCTTTTGTCCAACGTGTTGTAGAATTGTCGTTGTTGCTGAATTG
TCGTCGCATGTTTACTCGCCTTGTTCGTCTCTCAGGATGCTTCTTTATCA
GCGATCGGTTAGCCAAACAGCGGGGGCCAACGCTGGCGTTCAGAGTGCTA
CGGGGGCCATTTGCGAGCACGCCGCTGCGTCGTTGGAGGCGCTTGACAAG
AACACGGTGGTGGACGCGACGCCTATCTTTTTCAACGGCATCAACGGATG
TCCGTACGCCGGTTTGACCGCGTGTATCTCGCAAGCCCGAGCTAAAGCGT
TCTTGTCGGAAGTCGAAGAAACGTTGTTGTTGGGGATGGTGGCGGAAGCA
AAAGACATCGGCGTGCACCCAGTCGTCCAACTAGGCGAGTGGGGATACGC
CGTGAGCGAGAGGCGGAGTAGAACTTGCGAACTGGACTGGGCCCATGTGA
AGTACGACAAGGGTGACGGCAAGGGCAAGGGCAAGGGCAAG
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Coding sequence (CDS) from alignment at chr_00:7075789..7078929-

>Ec-00_004910.3 ID=Ec-00_004910.3|Name=Ec-00_004910.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1320bp|location=Sequence derived from alignment at chr_00:7075789..7078929- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAGGAGGGATGGTCAACCACCGTAGCGCAGAACTTGCGTCTAGCAC
TGCCAATGTAGCACAGCAGCCAGGATCCAGTGAAGCATCAGCAACTCCTC
TGTCTGCTCCAAGAACAACAGCGAGCGGTGTGGGACTCATGCAAGGAGGG
ATGGTCAACCACCGTAGCGCAGAACTTGCGTCTAGCACTGCCAGTTTACA
GCAGCCAGGACCCAGTGAAGCATCAGCACCTCCTCTGCCTGCTCCAAGAA
CAACAGCGAGCGGTGTGGGACTCATGCAGCAGGACACGCTATCTTGCGCA
GCTTGGGGTCCAGGTCCTGTGGGGGGTGGTATCCAAGAAAGTGGGTCTGC
TATGAGCGCTCTGAGCGGTGGTAGAGGCAGTGGTGTCGGCGTCAGCGTCG
GCGGTCACGTTCTTGGGTGGGGTGGTAGCCAAGCAGGGGGGGCTGGTCCC
GCTGCTGCAGTGAGCGGCCGCGGGAGGGGTGGTGTCGGCGGTCGAGTCCC
TGTGCGGGGCGGTGTGCAACCCTCACCAGGAACGGGAGTTGGTGCCCTTA
ACGCCAACGGCGGCAGAGGAGGTGGCAGACCTGCGCGCACTCTGAGCGGT
GGTAGAGGTGGTGGTGCCAGTGTCGGCGCTCATCGTCCTGGGCGGGGCGA
TAGCCAAACTCTGAGCGGTGGTAGAGGTAGTGGTGCCAGCGTCGGCGGCC
AACGTCCTGGGCGGGGCGGTAGCCAAGCAGGGGGGGCTGGTCCCGCTGCA
ACAGCGAGCGGCCGCGGGAGAGGCGGTGTGCAATCCTCACCAGGAACGAG
AGTTGGTGCCCTTAATACCAGTGGTGGCAGAGGAGTTGGCAGACCTGCGC
GGACAAGGACCACACTAAACCGCCGGTGCTCCGCGTGTGGTACATTGCCT
TTATACGGAAACCAGAAAAAGAGACTCTGTCTGGAGGATAGGTGCCCGCG
ATGGGCGTGCAGGGCGCGCTGCTACCACGGGTTCAACAAGGATCTCCAAC
AGAAGTGCTGCGAGTGCCACAAAAGCATCAAGACGTGGTGCGAGTGCAAA
AGCTGCTCAAGGAAAACACGGGCGGTGCCACCAGCCAACCGGGTATCAAG
GGGTACGGGTTTGGTCGCCGGATTAGGGGGCGGTAGGGGACGAGGAGCTC
CGCGGCATGTACCCGTGAGCGTGATACGCTTGCCTGCAGCGGATAATGCC
GTAAACACCACGGTCGGTATGCATCGCTGCGAACCAAAACTGGGTAGTGA
CGACGGTGCGACGGAATCCTGCGCCAACAGCGACGAACCCGAAGCCTTCA
CCGCGGAGCAGCTGCTCTAG
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Synonyms
The feature 'Ec-00_004910.3' has the following synonyms
Synonym
Esi0389_0001
Esi_0389_0001