Ec-00_004810.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_004810.3
Unique NameEc-00_004810.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length112
Homology
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: D7FZD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD8_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 3.000e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 
Query: 1851 LQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            LQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK
Sbjct:  146 LQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 221
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: A0A6H5L2R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R1_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.490e-21
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 3 
Query: 1815 VLNATACWFPSRLQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            V+  T     +  +V+EALK+NFP F VVEF G   +R QL  FA AS+++ PHGAGLANMI +PL TPVLEIAP +CPSCFL LA+K
Sbjct:  129 VVRTTLRGLKNNDEVKEALKINFPSFDVVEFFGTDPVRDQLLTFAKASMVIAPHGAGLANMIVAPLHTPVLEIAPLSCPSCFLRLALK 216
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: A0A6H5KZE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE8_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.930e-20
Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 3 
Query: 1854 QVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVKSSI 2087
            +V+EALK NFP F VVEF G GS+R QLK FATA++I+ PHGAGLANMI +PL TPVLEI    CP+CFL LA+K  I
Sbjct:  433 EVKEALKTNFPSFSVVEFFGTGSVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIGALACPACFLRLALKVPI 510
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: D8LIQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ4_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 9.600e-20
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 3 
Query: 1815 VLNATACWFPSRLQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            V+  T     +  +V+EAL++NFP F VVEF G   +R QLK FA+A++I+ PHGAGLANM+ +PL TPVLEIAP  CP CFL LA+K
Sbjct:  358 VVRTTLRGLKNNEEVREALEMNFPSFDVVEFFGTDPVRDQLKTFASAAMIIAPHGAGLANMVVAPLHTPVLEIAPIRCPPCFLRLALK 445
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 9.670e-20
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 3 
Query: 1854 QVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVKSSISTPG 2099
            +V+EAL+ NFP F VVEF G   +R QLK FATAS+I+ PHGAGLANMI +PL TPVLEIAP  CP CFL LA+K +  + G
Sbjct:  728 EVKEALERNFPSFDVVEFFGTDPVRDQLKTFATASMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLALKGTCVSNG 809
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: D7FWK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK4_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.680e-20
Identity = 50/75 (66.67%), Postives = 59/75 (78.67%), Query Frame = 3 
Query: 1854 QVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            +V+EAL++NF  F VVEF G   +R QLKIFATA++I+ PHGAGLANMI +PL TPVLEIAP  CP CFL LA K
Sbjct:  311 EVREALEMNFTSFDVVEFFGTDPVRDQLKIFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFK 385
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: D8LIQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ6_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.140e-19
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 3 
Query: 1854 QVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            +V+EAL+ NFP F VVEF GAGS+R QL+ FATA++I+ PHGAGLANMI +PL TPVLEI    CP CFL LA+K
Sbjct:  304 EVKEALERNFPSFDVVEFFGAGSVRDQLETFATAAMIIAPHGAGLANMIVAPLHTPVLEIGTLACPPCFLRLALK 378
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: A0A6H5JM62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM62_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.530e-19
Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 3 
Query: 1656 VVVLQELWETLSTLQRPK*AERPCVEQ-SMLRSDKLSMLDERENSIF*PSFRNR-----VLNATACWFPSRLQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            + +  E+   L+ L       RP  +  +MLRS  L  +  R   I  P    R     V+  +  W  +  QV+EALK  FP+  +VEF G G I  Q+++FATASVIV PHGAGL+NM+ASPL TPVLEI   +C +C+L LA+K
Sbjct:   75 IFIQTEIHADLAILPSSTPCGRPDTQMVNMLRSVLLKAMYPRTRGI--PPQVPRPVIVLVVRESRRWLKNNDQVREALKQYFPDHDIVEFWGIGPIIRQMQLFATASVIVAPHGAGLSNMVASPLHTPVLEIGSPDCSACYLHLALK 219
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: A0A6H5JFW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW6_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.990e-19
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 3 
Query: 1830 ACWFPSRLQVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            A + P++  V+EALK  FP F +VEF G G I SQL +FA AS+IV PHGAGL+NM+ S L TPVLEI P  C +C++ LAVK
Sbjct:   18 AAFLPTK--VREALKAEFPTFDIVEFLGIGPIMSQLNLFAAASLIVAPHGAGLSNMVVSSLHTPVLEIGPPICAACYMHLAVK 98
[Close]
BLAST of Ec-00_004810.3 vs. uniprot
Match: D7FKN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN9_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.550e-19
Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 3 
Query: 1854 QVQEALKLNFPEFRVVEFSGAGSIRSQLKIFATASVIVGPHGAGLANMIASPLRTPVLEIAPTNCPSCFLTLAVK 2078
            +V+EAL  NFP+F VVEF+G   IR+QL +FATAS+IVGPHGAGL+NM+ SPL T +LEI P +CP+C++ LA+K
Sbjct:  389 EVREALAQNFPDFDVVEFNGVEHIRAQLGMFATASMIVGPHGAGLSNMVVSPLHTMILEIGPIDCPACYVNLAIK 463
The following BLAST results are available for this feature:
BLAST of Ec-00_004810.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FZD8_ECTSI3.000e-36100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2R1_9PHAE1.490e-2159.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZE8_9PHAE1.930e-2066.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ4_ECTSI9.600e-2056.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7Y8_9PHAE9.670e-2063.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWK4_ECTSI9.680e-2066.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIQ6_ECTSI1.140e-1966.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM62_9PHAE2.530e-1942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFW6_9PHAE2.990e-1957.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN9_ECTSI6.550e-1962.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:6578761..6583639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length3132
Hectar predicted targeting categorysignal peptide
Gene idEc-00_004810.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004810Ec-00_004810Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 6574504..6583639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004810.3Ec-00_004810.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 6579504..6579839 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004810.3.1Ec-00_004810.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6578761..6580840 +
Ec-00_004810.3.2Ec-00_004810.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6582076..6582176 +
Ec-00_004810.3.3Ec-00_004810.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6582689..6583639 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0048105UTR:Ec-00_004810.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 6578761..6579503 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004810.3CDS:Ec-00_004810.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 6579504..6579839 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0048103UTR:Ec-00_004810.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 6579840..6580840 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_004810.3 ID=Ec-00_004810.3|Name=Ec-00_004810.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=112bp
MLDKFAVVTWAFFCFVVHLHLFFCAVPALDSELQTTSEIAASFLFTHERI
ALHDVHKFPMGFERRTYRQWIEEASHRGQRFVVRRRVRKDKRQLPPGCLE
IRSSCRTVCQH*
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spliced messenger RNA

>Ec-00_004810.3 ID=Ec-00_004810.3|Name=Ec-00_004810.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3132bp|location=Sequence derived from alignment at chr_00:6578761..6583639+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCAGGTTTGAGCTTGATACGTGGTCTAGCGAGGGAGAATACGATTGTGAT
GCCTTATGGTGTTTGGTGGCAATGTCGTATTGACTGCAGGCACGCGTTCT
GTCCTGTCCGTTGATTTCTTGTGGCCAAGTGTTTTCGTCTCGAACGCTTG
ACGAGCGACAGGTTCCTTTTAGCGACCACAACAGCTTTGGAGTAAGCTCA
GGAATGCTCGGGTCCCGTGATGAGCGCGCAATGTTCCGAGCTCGTGTCGC
AAAGTTGGTTGTCATCTCGTCTGACCCCTCTCTCCAGGAAATCCAAGCGG
AAAATGTCCCTGACGTCCGACTTGGATTTTCTTTTTTAGGATTTTGGCCA
AGTCCTTTTCCGTGAAAAAACCGTCTGGGATTTTCTTGATATGATAACGA
TTTGGTTTCGTTGGTTTTCCCAAATTGTAGGAAACAGACTGAGCAAGGGG
AGTTAACTAATATTTACAAATTATCGGACAATGAAAAATACATCCATGCT
GTAGCCGATGACACTAAACTTGGGTTCGTTGAAATGATGAAGCGCAAGCA
AAGCTGATGCTAAACACAAAAATAACACAAACCATTTTTTCAACACCAAA
ATGAGGATCCAAAATCATGTCGGCCTCCGTAAACGATGCATAAAAATGGA
TATTTTGCCGATGCCAGTCAAATCCCATAAGGAGTACTCTGGGAAACAAA
AATGCATAGTGTTGGTATGGCAGGGCGTTTGGCCTAAAATACTATGCTTG
ACAAATTCGCTGTAGTCACATGGGCGTTTTTTTGTTTTGTTGTACACCTC
CACCTTTTTTTCTGTGCGGTCCCTGCCTTGGATTCGGAACTCCAAACGAC
TTCAGAAATTGCTGCTTCATTTTTGTTTACTCACGAACGAATCGCTTTGC
ATGACGTTCACAAATTCCCCATGGGATTCGAACGAAGGACATACCGTCAG
TGGATTGAGGAGGCTTCCCACCGGGGACAACGGTTCGTGGTTCGCAGAAG
AGTACGAAAAGACAAAAGACAGCTCCCGCCGGGGTGCCTGGAGATCCGTT
CATCATGTCGGACAGTTTGCCAACATTGAATTTTGTCTGACAAACTAAAC
TAACAATATCCAATGAATCGTGTGTGCACCACGTCGCAATACTGTTCAAT
ACACGCAAATGTTCCTTTCTTCCCTCGGCAATTCGCCTTTTTTCTGCAGG
AACTCTATCCGAGCACAGGAGGCGTCGTCCCTACCCTTGATCGTCCTGTC
ATTGTGCTCATCGTCCGAACAGCACGCAGAGGTCTCAAGAACAATGATGA
TGTAGGTACCAATGCGAAAACAATGATTCTACTGAGAGAAAAGTAGAAAG
TTTTTGACCCCTTCAATCTAGGGCAGGTACGTGCCGTCAAGGAACGGCGG
CTGCCTGCGGGCTCAAAGAGAGATAAATGTGGGGTTCACCGCCGTAGTAC
CGTACAGCATACGTAGACGCGCGCTGTCGTGGGAGGGTGCGTGCGAGAAT
GCAAGCAGTTTGAGACTAGGGCAGGTAGGTGCCGTCGAGAAAGGGTGGCT
GCCTGGGGGCCTCAAATAACAGACACATGACGAGCAATATAGACAACCTC
GGGCGCTAGTTCTCAGAGCGTACGCCAAGCGGTGGAATGTTTTTGTGTCC
ATAGTCAGTCGTTGTTTTGCAAGAATTGTGGGAAACATTGAGCACTCTCC
AACGCCCAAAATAGGCCGAAAGGCCGTGTGTAGAGCAGAGTATGTTACGT
TCTGATAAGCTTTCGATGCTGGATGAAAGAGAGAACAGTATTTTTTAGCC
TTCGTTCAGGAACCGTGTACTCAATGCCACCGCTTGTTGGTTTCCATCAC
GCCTCCAGGTTCAAGAGGCGCTGAAGCTGAACTTTCCGGAGTTTAGGGTC
GTAGAGTTTTCGGGTGCAGGTTCCATCAGGTCACAGCTGAAGATCTTCGC
CACGGCATCCGTAATCGTGGGACCCCATGGGGCTGGCCTGGCAAACATGA
TTGCATCACCGCTACGCACGCCGGTCCTAGAGATTGCTCCGACAAACTGT
CCCTCGTGCTTTTTGACTCTCGCCGTGAAGCTCCAGCATATCTACGCCAG
GCACCCGGGTGGGAATCAGTGGAATGACACATGCTCATTTTTTTACGAAC
CTCCAGTCGACGAAGTCGTTGATCTCGTCAGGAATCTCTTGGTGGCCAAG
CGCCAGGCCGACGCCGCAGCCCCACCTTGACCCGAGGGGAGTTACCAAGA
ACGGGCGTAATCAATCTCCTCATGCTGCACAACATCAGTTGCAGGAAAAC
GATTAGGTATCGGCACGAGCAACGACTTCTGGCACTACGGACACGGTGCT
TGCGACATAGGAATGCCTTCGTTTTATCGCGTTTGTCTTGAAATTCATGA
GTCTTTACTCGATTATTTGCACTACGGACACGGTGCTTGCGACATAGGAA
TGCCTTCGTTTTATCGCTTTATCGCGTTTGTTTGTCTTGAAATACATTGA
GCCTTTATTTGATTACTTTTTTTGGTATACGTAGTTCGGGGGGATAGCCT
TTGCCACGAAAAGCGTGACGCATCAGGTGGACTAGTACGGACGGTAGAGG
TGATGCAGAGAGATCAACACCGTTTTGAATGTCATGACATGACAAAACAA
CAACAGGAACAATACTTGTGTAAGGGTAATATACATTCTAGCCTTGTACA
AAGAAAAACATCGCTAGTTAGGCGTTGAGACACAACGAGTCTATGCCTCG
ATCTGGCTTGAGCGGATGTATACTCGAAAGTCAAGGTTAACCTAGCACGA
CCTAGGAGAAAGGTATATTTCTCACACGCGGTAATGGCAAACCCGAGTGC
TGTACACCAGGGAGTTAGTGTGAGACGTGCGGTGTGATCCTTGTTTTACG
GGTGGAGTCTTTGGAGATCATTAGGGAGTGTTGGGTATGATACTGTACGG
TAGTGCATTGGGTGGTTTTGATGGTACCATGCTATTGAGACGCTCGTTCG
TCCGAGATTACAGTTGTATTTGTTGTGTCGGCTCGGCTGGTGGTTTCCAG
AGGGAGAGGTCCGGCGTAGGTGAGAGCTCTCCCTCGACAGGGCACATAAA
AAATATTTTCTGAGGAGTCGAAATAAAAAAAA
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protein sequence of Ec-00_004810.3

>Ec-00_004810.3 ID=Ec-00_004810.3|Name=Ec-00_004810.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=112bp
MLDKFAVVTWAFFCFVVHLHLFFCAVPALDSELQTTSEIAASFLFTHERI
ALHDVHKFPMGFERRTYRQWIEEASHRGQRFVVRRRVRKDKRQLPPGCLE
IRSSCRTVCQH*
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mRNA from alignment at chr_00:6578761..6583639+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_004810.3 ID=Ec-00_004810.3|Name=Ec-00_004810.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4879bp|location=Sequence derived from alignment at chr_00:6578761..6583639+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCAGGTTTGAGCTTGATACGTGGTCTAGCGAGGGAGAATACGATTGTGAT
GCCTTATGGTGTTTGGTGGCAATGTCGTATTGACTGCAGGCACGCGTTCT
GTCCTGTCCGTTGATTTCTTGTGGCCAAGTGTTTTCGTCTCGAACGCTTG
ACGAGCGACAGGTTCCTTTTAGCGACCACAACAGCTTTGGAGTAAGCTCA
GGAATGCTCGGGTCCCGTGATGAGCGCGCAATGTTCCGAGCTCGTGTCGC
AAAGTTGGTTGTCATCTCGTCTGACCCCTCTCTCCAGGAAATCCAAGCGG
AAAATGTCCCTGACGTCCGACTTGGATTTTCTTTTTTAGGATTTTGGCCA
AGTCCTTTTCCGTGAAAAAACCGTCTGGGATTTTCTTGATATGATAACGA
TTTGGTTTCGTTGGTTTTCCCAAATTGTAGGAAACAGACTGAGCAAGGGG
AGTTAACTAATATTTACAAATTATCGGACAATGAAAAATACATCCATGCT
GTAGCCGATGACACTAAACTTGGGTTCGTTGAAATGATGAAGCGCAAGCA
AAGCTGATGCTAAACACAAAAATAACACAAACCATTTTTTCAACACCAAA
ATGAGGATCCAAAATCATGTCGGCCTCCGTAAACGATGCATAAAAATGGA
TATTTTGCCGATGCCAGTCAAATCCCATAAGGAGTACTCTGGGAAACAAA
AATGCATAGTGTTGGTATGGCAGGGCGTTTGGCCTAAAATACTATGCTTG
ACAAATTCGCTGTAGTCACATGGGCGTTTTTTTGTTTTGTTGTACACCTC
CACCTTTTTTTCTGTGCGGTCCCTGCCTTGGATTCGGAACTCCAAACGAC
TTCAGAAATTGCTGCTTCATTTTTGTTTACTCACGAACGAATCGCTTTGC
ATGACGTTCACAAATTCCCCATGGGATTCGAACGAAGGACATACCGTCAG
TGGATTGAGGAGGCTTCCCACCGGGGACAACGGTTCGTGGTTCGCAGAAG
AGTACGAAAAGACAAAAGACAGCTCCCGCCGGGGTGCCTGGAGATCCGTT
CATCATGTCGGACAGTTTGCCAACATTGAATTTTGTCTGACAAACTAAAC
TAACAATATCCAATGAATCGTGTGTGCACCACGTCGCAATACTGTTCAAT
ACACGCAAATGTTCCTTTCTTCCCTCGGCAATTCGCCTTTTTTCTGCAGG
AACTCTATCCGAGCACAGGAGGCGTCGTCCCTACCCTTGATCGTCCTGTC
ATTGTGCTCATCGTCCGAACAGCACGCAGAGGTCTCAAGAACAATGATGA
TGTAGGTACCAATGCGAAAACAATGATTCTACTGAGAGAAAAGTAGAAAG
TTTTTGACCCCTTCAATCTAGGGCAGGTACGTGCCGTCAAGGAACGGCGG
CTGCCTGCGGGCTCAAAGAGAGATAAATGTGGGGTTCACCGCCGTAGTAC
CGTACAGCATACGTAGACGCGCGCTGTCGTGGGAGGGTGCGTGCGAGAAT
GCAAGCAGTTTGAGACTAGGGCAGGTAGGTGCCGTCGAGAAAGGGTGGCT
GCCTGGGGGCCTCAAATAACAGACACATGACGAGCAATATAGACAACCTC
GGGCGCTAGTTCTCAGAGCGTACGCCAAGCGGTGGAATGTTTTTGTGTCC
ATAGTCAGTCGTTGTTTTGCAAGAATTGTGGGAAACATTGAGCACTCTCC
AACGCCCAAAATAGGCCGAAAGGCCGTGTGTAGAGCAGAGTATGTTACGT
TCTGATAAGCTTTCGATGCTGGATGAAAGAGAGAACAGTATTTTTTAGCC
TTCGTTCAGGAACCGTGTACTCAATGCCACCGCTTGTTGGTTTCCATCAC
GCCTCCAGGTTCAAGAGGCGCTGAAGCTGAACTTTCCGGAGTTTAGGGTC
GTAGAGTTTTCGGGTGCAGGTTCCATCAGGTCACAGCTGAAGATCTTCGC
CACGGCATCCGTAATCGTGGGACCCCATGGGGCTGGCCTGGCAAACATGA
TTGCATCACCGCTACGCACGCCGGTCCTAGAGATTGCTCCGACAAACTGT
CCCTCGTGCTTTTTGACTCTCGCCGTGAAGGTGAGAATAATACCGGGCAT
TACAGGATAGTCCTGTATTTTCTGGCTGTCTGCGTTTGTCCATGTTGGCC
TGCATACGGCGGAGTTTTTGCCTGGCCGGTGAGAACCCTACTTTTATTCC
CCAGGCATGGTAGGTGTGTGGATTGTTGGATCTTTCTCATTTTCCTCTCT
GGAATGGGGCACACGCAGATTTGTGAATGAATGCCTCTTTGTATTTGTGT
CTCGAGTTTTGAGCCCCTCAGACACTTGAGGTACGTGTGTGAGGGAATGG
CAGGGCCGGTGTTAACCCGGGATAAAGACACCCCAGCTACAAAGACGCAA
CTGGCCCGATCGCTTTTTGTCATTGTAGTTGGTGATATTGATTGTCTTGT
TTCATATCTAGGTTTTTCACTTCGCGTGGCACTACGGACACGGTGCTTGC
GACATAGGAATGCCTTCGTTTTATCGCGTTTGTCTTGAAATTCATGAGTC
TTTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATATTTCTCACACGCGGTAATGGCAAACCCGAG
TGCTGTACACCAGGGAGTTAGTGTGAGACGTGCGGTGTGATCCTTGTTTT
ACGGGTGGAGTCTTTGGAGATCATTAGGGAGTGTTGGGTATGATACTGTA
CGGTAGTGCATTGGGTGGTTTTGATGGTACCATGCTATTGAGACGCTCGT
TCGTCCGAGATTACAGTTGTATTTGTTGTGTCGGCTCGGCTGGTGGTTTC
CAGAGGGAGAGGTCCGGCGTAGGTGAGAGCTCTCCCTCAACAGGGCACAT
AAAAAATATTTTCTGAGGAGTCGAAACAAAAACAAATGGGATATGCATTT
CGCAGCATCTCGCTGACGGTGGTACAACGGCGCTTTTCGTGTTCTTTTCA
ACACCACGAGCGCAGCTCCAGCATATCTACGCCAGGCACCCGGGTGGGAA
TCAGTGGAATGACACATGCTCATTTTTTTACGAACCTCCAGTCGACGAAG
TCGTTGATCTCGTCAGGTGAGAAATCTCGCACTGAAGAGACAAACAGGTA
GATCGACCTCCCGCTGGTGTAGATGGTAGGTTTTTCGCCTTCTCCAAAGT
CAGTTTTCTTCCGTATCGTCTTGGGTGCATCTGTTCACATGCATCAAGGG
GCCTCACTTTGCGAAGTGATTAATGCGCCGAGTTGTTCTGTGTGGGGTTC
ATAAATGGAGAACAAATATGAAAGCTAAGGTGGTGTTTCGTTTTCCCTCT
CTCCGACGTTACAGGCTTGTGATTATTCATGCTCTTTGGCATCTACCAAT
GCCTTTCCCAAAGCTTCCTCGCCCACTCTGATACGTACGCTCGTCGGCGC
CCCAACAGAGAGGCCGTTGGTGCTGCAAAACTGCTTAAGTTTTTGTCAAT
CCGTTTCTGAGGCCTGACAGATTCCTGAAGTATCACAAACCGATGGACAT
ATGTGTAGACACACCCGCAGCAGTAGCCTAGTGCAACTCCCAACAAACCG
TTTACTTCGTTTGGTACTTTGGTTGCAGGAATCTCTTGGTGGCCAAGCGC
CAGGCCGACGCCGCAGCCCCACCTTGACCCGAGGGGAGTTACCAAGAACG
GGCGTAATCAATCTCCTCATGCTGCACAACATCAGTTGCAGGAAAACGAT
TAGGTATCGGCACGAGCAACGACTTCTGGCACTACGGACACGGTGCTTGC
GACATAGGAATGCCTTCGTTTTATCGCGTTTGTCTTGAAATTCATGAGTC
TTTACTCGATTATTTGCACTACGGACACGGTGCTTGCGACATAGGAATGC
CTTCGTTTTATCGCTTTATCGCGTTTGTTTGTCTTGAAATACATTGAGCC
TTTATTTGATTACTTTTTTTGGTATACGTAGTTCGGGGGGATAGCCTTTG
CCACGAAAAGCGTGACGCATCAGGTGGACTAGTACGGACGGTAGAGGTGA
TGCAGAGAGATCAACACCGTTTTGAATGTCATGACATGACAAAACAACAA
CAGGAACAATACTTGTGTAAGGGTAATATACATTCTAGCCTTGTACAAAG
AAAAACATCGCTAGTTAGGCGTTGAGACACAACGAGTCTATGCCTCGATC
TGGCTTGAGCGGATGTATACTCGAAAGTCAAGGTTAACCTAGCACGACCT
AGGAGAAAGGTATATTTCTCACACGCGGTAATGGCAAACCCGAGTGCTGT
ACACCAGGGAGTTAGTGTGAGACGTGCGGTGTGATCCTTGTTTTACGGGT
GGAGTCTTTGGAGATCATTAGGGAGTGTTGGGTATGATACTGTACGGTAG
TGCATTGGGTGGTTTTGATGGTACCATGCTATTGAGACGCTCGTTCGTCC
GAGATTACAGTTGTATTTGTTGTGTCGGCTCGGCTGGTGGTTTCCAGAGG
GAGAGGTCCGGCGTAGGTGAGAGCTCTCCCTCGACAGGGCACATAAAAAA
TATTTTCTGAGGAGTCGAAATAAAAAAAA
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Coding sequence (CDS) from alignment at chr_00:6578761..6583639+

>Ec-00_004810.3 ID=Ec-00_004810.3|Name=Ec-00_004810.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=336bp|location=Sequence derived from alignment at chr_00:6578761..6583639+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTGACAAATTCGCTGTAGTCACATGGGCGTTTTTTTGTTTTGTTGT
ACACCTCCACCTTTTTTTCTGTGCGGTCCCTGCCTTGGATTCGGAACTCC
AAACGACTTCAGAAATTGCTGCTTCATTTTTGTTTACTCACGAACGAATC
GCTTTGCATGACGTTCACAAATTCCCCATGGGATTCGAACGAAGGACATA
CCGTCAGTGGATTGAGGAGGCTTCCCACCGGGGACAACGGTTCGTGGTTC
GCAGAAGAGTACGAAAAGACAAAAGACAGCTCCCGCCGGGGTGCCTGGAG
ATCCGTTCATCATGTCGGACAGTTTGCCAACATTGA
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Synonyms
The feature 'Ec-00_004810.3' has the following synonyms
Synonym
Esi0364_0018
Esi_0364_0018