Ec-00_004750.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004750.1
Unique Name	Ec-00_004750.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	152

Homology

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BLAST of Ec-00_004750.1 vs. uniprot
Match: D7FZD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD6_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 3.380e-126
Identity = 292/475 (61.47%), Postives = 298/475 (62.74%), Query Frame = 1

Query:  235 MEPGEPAVDFLSRRLPRMRGGPLPALEPRRTGQLGRDAAALLDRGPSYLAMGPRQKTAATRRPVPATCHRLLRVRVXXXXXXXXXXXXXXXXXXXXXRLKRRQEHLGPRPAQRSTQARASKSVRPVLTESTWALKSSTLSRPAGGPCVQGI*DRSFMMWKRHILIPFEANLKLNGNYQGDSTVVLDPGSFVAIQKYVGSQKQQYSAAQKKNHHGTGSAAPAKEATKPLVIARAKVWSDNKSCH*PPSTLEASGGPLHSEL--SPPSTRHAARDGEGXXXXXXXXXXXXXXXXXENDGALELDDDEAEKGFSQGTPPAGTMGGGGASKGKGKXXAGGGQASXXXXXGGGTPRRDRGRGGELPKLTASTMQAFARGSGSEDIAGYTNRSASAIESVASALLGXXXXXXGVAAGSWGRASAGASEEERKWRKERELLGLTVDYQNNNKDRNIHGLIQKTFRKLVCLSDDDEGGDADDA 1653
            MEPGEPAVDFLSRRLPRMRGGPLPALEPRRTGQLGRDAAALLDRGPSYLAMGPRQKTAATRRPVPATCHRLLRVRV                                              +R                 P+ G                                                                                  L I  A+                A G  L  E+  + P+ R   RDGEGXXXXXXXXXXXXXXXXXENDGALELDDDEAEKGFSQGTPPAGTMGGGGASKGKGKXXAGGGQASXXXXXGGGTPRRDRGRGGELPKLTASTMQAFARGSGSEDIAGYTNRSASAIESVASALLGXXXXXXGVAAGSWGRASAGASEEERKWRKERELLGLTVDYQNNNKDRNIHGLIQKTFRKLVCLSDDDEGGDADDA
Sbjct:    1 MEPGEPAVDFLSRRLPRMRGGPLPALEPRRTGQLGRDAAALLDRGPSYLAMGPRQKTAATRRPVPATCHRLLRVRVE---------------------------------------------LRXXXXXXXXXXXXXXXKHPSTG----------------------------------------------------------------------------------LKIGEAR----------------ADGVHLGVEILNAVPACR---RDGEGXXXXXXXXXXXXXXXXXENDGALELDDDEAEKGFSQGTPPAGTMGGGGASKGKGKXXAGGGQASXXXXXGGGTPRRDRGRGGELPKLTASTMQAFARGSGSEDIAGYTNRSASAIESVASALLGXXXXXXGVAAGSWGRASAGASEEERKWRKERELLGLTVDYQNNNKDRNIHGLIQKTFRKLVCLSDDDEGGDADDA 329

The following BLAST results are available for this feature:

BLAST of Ec-00_004750.1 vs. uniprot

BLAST of Ec-00_004750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FZD6_ECTSI	3.380e-126	61.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:6528174..6537255 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	3488
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004750.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750	Ec-00_004750	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 6527768..6538856 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750.1	Ec-00_004750.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 6528409..6534458 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750.1.1	Ec-00_004750.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6528174..6528593 +
Ec-00_004750.1.2	Ec-00_004750.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6533478..6533630 +
Ec-00_004750.1.3	Ec-00_004750.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6533984..6534078 +
Ec-00_004750.1.4	Ec-00_004750.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6534436..6537255 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750	5UTR:Ec-00_004750.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 6528174..6528408 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750.1	CDS:Ec-00_004750.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 6528409..6528593 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004750	3UTR:Ec-00_004750.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 6534459..6537255 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:6528174..6537255+
coding sequence from alignment at chr_00:6528174..6537255+

mRNA sequence

>Ec-00_004750.1 ID=Ec-00_004750.1|Name=Ec-00_004750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=152bp
MEPGEPAVDFLSRRLPRMRGGPLPALEPRRTGQLGRDAAALLDRGPSYLA
MGPRQKTAATRRPVPATCHRLLRVRVELRRQRQRSPDMNQRQRQARARLK
RRQEHLGPRPAQRSTQARASKSVRPVLTESTWALKSSTLSRPAGGPCVQG
I*

spliced messenger RNA

>Ec-00_004750.1 ID=Ec-00_004750.1|Name=Ec-00_004750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3488bp|location=Sequence derived from alignment at chr_00:6528174..6537255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CACTACTGGCGGGATCAGCTGACGACGTTGCCACCGAAGCAGCTGGCGTT
TTGATCGACCTGGCGGCGGGTGCTGCCCCCTCGGGTGCTGAAACACCAAC
CGGCACCCCGGCGAACCGGGCAGGTGGGGTCGGTGGCGCGCTTCTCGTTT
GAACCGGGCTTGCAAGAAATCCCCGGCGCGTGGTCTCTGACTCCCCCCAG
AAGTTTGGTGGACCGTCTGGAGCAGGCTGAGGAAGATGGAACCGGGGGAG
CCAGCGGTGGACTTTCTCAGCAGGCGCCTGCCGCGAATGCGCGGCGGGCC
GCTTCCGGCTCTGGAGCCTCGAAGGACGGGGCAGCTAGGTCGGGACGCGG
CGGCGCTACTCGATCGCGGCCCGTCGTACCTCGCGATGGGACCTCGGCAG
AAGACGGCAGCAACAAGAAGGCCCGTTCCGGCGACTTGCCACCGACTGCT
CCGCGTGCGGGTGGAACTTCGTCGGCAACGCCAGCGTTCTCCCGACATGA
ATCAGCGACAGCGGCAGGCGAGGGCTCGGCTCAAGAGAAGGCAGGAACAT
CTGGGCCCAAGACCGGCACAAAGAAGCACCCAAGCACGGGCCTCAAAATC
GGTGAGGCCCGTGCTGACGGAGTCCACCTGGGCGTTGAAATCCTCAACGC
TGTCCCGGCCTGCCGGAGGACCCTGCGTTCAAGGGATTTAGCGACAGGTC
GTTTATGATGTGGAAGCGCCATATCCTCATCCCCTTCGAGGCCAACCTGA
AGCTAAACGGAAATTACCAGGGAGACTCCACGGTTGTCCTTGACCCCGGG
AGCTTCGTCGCAATCCAGAAGTATGTGGGCAGCCAGAAACAACAGTACTC
GGCGGCGCAGAAAAAGAATCACCACGGTACGGGGTCTGCTGCTCCGGCCA
AGGAGGCGACAAAGCCGTTAGTCATCGCGCGGGCGAAGGTCTGGTCGGAC
AACAAGTCGTGCCACTAGCCGCCGTCGACGCTAGAGGCTAGCGGGGGGCC
TCTACACTCCGAGCTGTCCCCGCCTAGCACCCGGCACGCCGCCAGGGACG
GTGAGGGGGGAGGGGGGGGCGAGGATGGCGGCTCCCCACCACCGGACTTC
GGGGGGGGCGAGAATGACGGTGCGCTTGAGCTTGACGATGATGAAGCCGA
AAAAGGATTCAGTCAAGGGACGCCCCCAGCTGGGACCATGGGCGGGGGCG
GAGCGTCTAAAGGCAAGGGGAAAGGAAAGGCGGGAGGAGGACAAGCCAGC
GGCAACGGGAGAGATGGCGGCGGCACCCCGCGTCGGGACAGGGGACGGGG
GGGGGAGCTGCCGAAGTTGACGGCGTCGACCATGCAGGCTTTCGCTCGGG
GTAGCGGGTCCGAAGATATTGCGGGGTACACCAACCGGTCTGCCAGCGCG
ATTGAGTCGGTCGCGAGCGCGTTGCTGGGGGGTGGCGGGGCTGCAGCCGG
GGTTGCAGCCGGGTCTTGGGGCCGGGCTTCAGCCGGGGCGTCTGAGGAAG
AGCGCAAGTGGCGAAAGGAACGCGAACTCCTCGGTCTGACGGTCGACTAC
CAAAACAATAACAAGGACCGTAACATCCACGGACTGATTCAGAAGACGTT
CAGGAAACTCGTATGCCTCAGCGACGACGACGAGGGTGGGGACGCCGACG
ACGCGTAGATCTCGCGCCTCTTTTATATACTCGAGTATGTGTTTCGGCCT
TTTCATTTTTTCTTCGGGTTTTGAGTGCGACGCGTTTTTTTTTTTTTCTC
ATTTTTTTGCGGGGGGTGGGGGGATAAGTACTTCTCGCTCTGCTGTTGTC
ATGCAGACGTGTTTGGGTTAGTTAAAGAATGGGGTGTGGTGTCGCATGTC
GAAGGTGTTGAGGTTAGGGGGGGTTAGGACAAGGGTTTGGCGGCCGAGGT
GTTTGTCTCAACTCGGGTCCGCGTCTTGCGGCGCTTCCGTCTCAACTGGG
TCGTTTTGACTTTCGTTCGTGTCTCTTTCCATGACCGTTTCCCTTCGCAC
GCGTTTAGAGGGCATTTCTTGGTTAGTTTCCCCTGCAGTTTGTTCGGGTA
ATTGACGTATCTGGGTAAAGTGTGTCCTTGTTGTGGTCAGGAGAGAGGGG
GGCGGTGGTTGATTTCTTCTAGCTTGATATGGTGAGTCGCTCGTATCGCG
CATCTTTTTCGTCTCTGGTGTGTTCCGTTGAGGTCATATTTCCTGCGCTT
CTTCCATAAGTTCGTCCTCTATTCCTGAGTTTTCGGGTCTGTTTTTGTCG
TGTTTTTTCCCCTTAACCTGCGTAGTCGCACAGGCGTTTTGAACTTCTGC
GAATTGCCGCGCTTCTGTTTCGTTTCTATGCGTCGGTCGTTCCTTCCTCC
TGTTCGTATCTCTCTTCATGAGTCTCCGCTTTCGCTTTTTCATGGGGGGA
GAGGGAAAGAGTATCTCCGTTGTTTTCGCTTTAGTTTTTGTAGTGTTTTT
TTTTTTACAAAGTGCGTTCTTGTCGTGGTGAGGACAAGTTAGGGGGGGTG
GGGTGGGGGGGGGTAGGGGTGCGGAAGTCCTTCTCTCTCAATTTGGCGAG
TCGCTCAGGGGTCGAGGTTCGATGCTCAACGACACGCGTGTTGGACCCGA
CATAGAGTCCGGGCATAGCCGCGTTTCTTCCTCGTTTCATAGACTGAAAT
GCTAGCTTATATGCGTCGATGGGATGCCGAAAGCCGTAACGCCAACGTTT
CAGTGGGATTCTGATTGCAAGGTTAGGTTGAAACTCTATTGTCTTATATT
CCAGTGGGAATATGACTGAGGATTTCCTGAACTGAGTTGGCGCTCATGCG
TACTGATGTATTGGAGGTTGGGTTTGACGTGTCCTGGCTGTTCAGGGTAG
GCGTCTAATGTGCTTTCCGAACATCGACCTCGCTGGTCAAGAAGTTGGAA
CCAGATTGCTTTTTTATTTAACATTTCGTTCTGATGTACTCATCATTTTA
CCGGGGTTGACCGTCGCGACGATCGAGATACAGTTCTGATGAAGCGTTGA
GTTTAATGTTTGTTATTTTTTCGAGGTGAATTCTGTTGTTTTGGCAGCTT
GAGATTTTATCAAGAGGAGTTAATAACATGGGTTTGGACTGGTGTTTGGT
ATGTAGGGGCTTTTTTTTGTTGCCATTTGAACGGTCCTAACGGTAAATTT
GGCTTTAGCGGTATCTTCGCAGAACAGGGTGTGTGAGGTGCGCAGTTGGT
ACAAGTGTCATGTGCATGTCACAGGGGTTCGAGCACCCTGTTGTCGCTCT
GCTAGGTGAACGTACAAGTCAAGTTTGTCGCAAGAGGCGCCTCCGGCAAT
AGTCCGAAGCGTGTTGGGGTAGGTCACGCCAACGAAATGCAATATTTTCG
TCTACCGCGGAAGTGTTCTCGGACGCAAGGCAAGACAACAAGAGGAGTCC
CTCTCTCCCTCGTGGGATTTGCCATTGCCCGTTGCCGGTGACGTGTGGAC
TGCCGTCACGGCGGTAAAAAATTTAAATTATCAGCTTT

protein sequence of Ec-00_004750.1

>Ec-00_004750.1 ID=Ec-00_004750.1|Name=Ec-00_004750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=152bp
MEPGEPAVDFLSRRLPRMRGGPLPALEPRRTGQLGRDAAALLDRGPSYLA
MGPRQKTAATRRPVPATCHRLLRVRVELRRQRQRSPDMNQRQRQARARLK
RRQEHLGPRPAQRSTQARASKSVRPVLTESTWALKSSTLSRPAGGPCVQG
I*

mRNA from alignment at chr_00:6528174..6537255+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004750.1 ID=Ec-00_004750.1|Name=Ec-00_004750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9082bp|location=Sequence derived from alignment at chr_00:6528174..6537255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CACTACTGGCGGGATCAGCTGACGACGTTGCCACCGAAGCAGCTGGCGTT
TTGATCGACCTGGCGGCGGGTGCTGCCCCCTCGGGTGCTGAAACACCAAC
CGGCACCCCGGCGAACCGGGCAGGTGGGGTCGGTGGCGCGCTTCTCGTTT
GAACCGGGCTTGCAAGAAATCCCCGGCGCGTGGTCTCTGACTCCCCCCAG
AAGTTTGGTGGACCGTCTGGAGCAGGCTGAGGAAGATGGAACCGGGGGAG
CCAGCGGTGGACTTTCTCAGCAGGCGCCTGCCGCGAATGCGCGGCGGGCC
GCTTCCGGCTCTGGAGCCTCGAAGGACGGGGCAGCTAGGTCGGGACGCGG
CGGCGCTACTCGATCGCGGCCCGTCGTACCTCGCGATGGGACCTCGGCAG
AAGACGGCAGCAACAAGAAGGTGAGAGTGTGTCTCCCCACACCTCTACAA
GAGTGCACAGAACCTCTTTGTATTTAAATTTTGCCGGTCACGACGTACAT
CTACAAAACTTCGCACGTACTAGTGACTCCTAGTCTCAGTTGATACCTCG
CATAGAGCGCAGAGGGAGTGAAGGACTCCAGAATATCTGTCGTTGATTTC
TATTGACTTGCGGACCCCTCGGGGCCAGTTTATTTGAGTGTACCTTTTTA
GGGTAAGTTAACCTGTGACCACGAGAATCGACCGCGTCGAGTGTTGGATC
AGTACGGACATACGAAGGTACTGGGTAGAGAGAGATCGGAACGGTTTTTA
ACCAGTGATGTCGATAACCGGGCTCGAGCAGGGTACTGACCGGAAATAAC
CGGAAATGAGCCTTCGGCGGTACGTACCGGTTATAACCGCTCATAGCGGG
GACGAAAACGGCCCATCCCCGGGGTGTTATTTAACGTATACGTCCAATAT
TTTGTTCGTTTGGAAGCAGCTCGCTGTATGCTGTTCAAGGTGCACTTCTG
TGCGCGTTGCTGCCACTGCTGCCGCAGTCGTGTGTATCGTTTCAGCTTCC
TACCTTGAACCTTTGAACCACGTTACAATGCAGGTGCAATATTGGAATGT
TGTCATGAATACATTTTTTTTTTCTCGCCCATGAGAATATAGGAAAGCCC
CGAGAAAAACAAAAAAAAAAAAGCTTGTCTTCTCATCTGCTAGTGCGTAA
TGTTCCTCCTATAGATCTCACAACAACGCGCAGCAAGTGGAAAAAAAAAA
AGACAAATAAGTATCAACGACAGGAAGGAGAGAAAGAGAGAAAGAGAGAG
AAGGAACGAAACAACTTCCGCCAGTTGAAACAAAAGAGAACCCCCTTGAC
ACTTCCCCTCCGCCCGCAGCTCTCTGCGTCTTGCTACATCAGACCGAAAC
AAAAACACAAAACTGCCCCCGAGTAAGATCAACAACAAACACCCTTGAGC
CCGAGCCATCAACAGCTGCTTCAATCTTTGCAAACTAGTACCGAAGGCCA
ACACAAGTCTAGACCATGACCCCCTCGTCGTCCGATTCGTCCATGTCTGC
TACTGATGCTGTCGTGTGCGCTGGCTGGCGTGAGTGTGTGCGCCATGTGC
GAGGGGGGCCCGCAGGTGAAAATACTCCACCCCCCCGGTGTTTGCCAACG
GGGTTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCCCCCA
CTCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGTTG
TAAAACAAGCCAATTCGCTTCGTGAACTCGGCAACCAGGTTACCGTTTTT
TTTTTTTTTCCTCGGGTTTTTTTTTTTGGCGGTAACCATAATGGTGGTCG
AGTAGATCATGTTGTGCGGGGTCGAGAAACCTCACTCCGCGCAACGGGGA
TGATCGCACCTCGTTGTGTTAAAATGGTCAAGCTTCCTCGAGGCAGTTAC
ACAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAAATTAA
GTCATACGTAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGA
ACACCCTTAGCAGGATGCAGCTCACCCTTCATGCGACTCGCCAAATACCT
CACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCG
GCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCAAACGAC
TACGACATGCACGACTATGAGTACACCCCCCCCCCCCCCCCCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATATC
CCCCCCCCCCCCCCCCCCCCCCCCCAGTGAGGGAGTAAAAGTAGGGGACA
CGGAAACTTCGGTGTCAGGAATGCTGTTTGCGGATGATTTTGTTGGTATG
TCGGACACCCCTGAGGGACTGCAACTGCAAATTGACGCGGCGAAGAAGTT
TACTGATAAGTGGAGATTGTCTGCCAACGTTACGAAGAGTGCCGTCATGG
TATGCAACGAGGGCAGGGAGGAACCAATAGAACATAGATGGAAGTGGGGG
ATCGAGGAGATTGCAGTAGTGGACCAGTACACATACCTCGGAGTAGAGAT
CGCAAAAGATTGCTCGTGGAATGCACACATGTCCGAGGTAGCGGAAAAGG
GCAAAGCACGAGCAGGGAAGCTGCACCCAATACTCGCAAACCGGCACCTT
GATACACGCATCAAACTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCT
AGAGTACGCCGGAGAAGTATGGGAAGGAAATAAGAAGGTAGTGAAAGAAC
TCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCCTAGGATGCTCCAAG
CGCACAAGTAATGCAGCAGTCAGGGCAGAATTGGGGATCCAATCCCTACG
GTCGGGAAGAGACGTAAGGAAGCTGACATGGCAGTATCGCATGTGCGGGA
TGGGAGAGGAGAGGTTGCCGAGAATAGTATGGGAGGCGAAGTGGGCAAAC
AAAAAGAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGT
ATGGAAGGGATTGGACATCGACGAAGATGAAACGCTGGAAACGGAGGGTC
TACAGGGGTTCAAGAAGAAGATATCTGTTGCTTGTGCCGACAGAGAAGAA
CAGAATCTAAGGAAAGAATCCAAGGATAAGGAGGGTCTAGAAGTGTACGG
AATGTTGAAAGAAGGAATAGGGTTCAAGGATTACCTACATGGACCAATGG
ATGCAGGGACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATAGGCCTT
CGCGAACGCCGACGAAGACATAGGACGGTAGACGACGAAGACGACAAGTT
CAAATGCGATTGCGGCTTCGAATGCGAAGACAGTGTTCATGTAGTCGCGG
AATGTCCGTGGTACGAAAAGGAGAGGGAAGTGTACATGAATGAGCTGGGA
AGAATACAAGGGACGTACAGGGAGATGTTTGAGGCATGGAATAGAGAGGA
GAGGACGGTAGCGGTACTGGGGAGTAGAAAGTGGTTTGAAAAGGCGGGAA
GTGACATCGGTAGGATAGACAAACTAGGGAAGACATTTTTGAGCCACCTT
TGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGATCGGTCCTGTGGGAA
CAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAAGG
CATGCAAAGCATAAGAGTACGCCCCCCCCCCCCCCCCCCCGGGGGGGGCC
CCCCCGGAATTGAAAAATAACCTGGGATTTCCAGGGGACCTACCGCTGAA
CCCTGTAACCGGTTATAACCGGTACCCCGTTATCGACATCACTGTTTTTA
ACCCCTTTGGGTCTAGGCTGCACTGTCAGATTTGTTTTTTTGCGCCAAAA
AAAAAAATGAGAGCGAGAGCGAGCGGGAGAGAGAGAAGTGCAGAGAAAGA
CACCAGTGTACTTCTGCACACGCAACAGCTATCTCCACCTGTAGGCCATG
AGAGAAGCCGGCGACAGGTGGTGGCCACAGACAGGGTCGTAGAAAGGTTG
ATGGGTGGTCGCGCTGCGGTCAGTAGGGCAGGTTAGCTGTGTAGACTTTG
AAATGATCAGTCGTCTAGCTGCCTCAACTAGTCTATTTTCGGTATATTGT
AAATGATCAGTCCAGAAAGGGCAAAATGATCAGTGAAGACCCATAGCTGG
TATTTGTACTTCTGTACTTCTCTGTTCTCTGTCCCCCCCCCGAAATGTGC
CCTGCCAGCTCTCTAGAGCTCCTGTGTTTTTCAAACAACAAGCACATCCA
CCAGCACACACCTGTACCTCGTGGTTTCCTAGGTTCGGGCGAGGGTGGTA
TGTGTGGCGGTACGAGTGTGGATGTGTTGCTGATATGTTTTACTCGTCTA
CAGCAATAGTAGTAGTGTCGTTGTAGCGTTCGTTGTAGCTGCTGACACAA
TGACTGCTGGATCTTGGGAACGATTTTCGAATTGTTGGGAACCAACCATG
ATATCCTCGATATCTGGGCTTCGGCAGGGATTGCGATACCCCTCCCTTTT
GCTGCCCTCTGCTCTTTGCAGCAGTGGTTTCCTATACGTTCGGGCGAGTG
TATGTGTGGTGCTGCGAAAGAACACGTATGTATGTTTGTATGTATGCACA
CACGCGTTCATGTGCATACGTTGAGAGATCCATGATTTGGCATTGATTGG
CCCCATTCCCATTCCCGAGACCTTGATATTACCCGCTGTCACTGACGTCT
CTTCATTGGTCAGCCGGTTAGCGCGGGTGCTAATAATCTAGACACACCTA
CCTATGGACTTGCCAATACACGGCGCGAAGGGCTGCAGGGCGGCAACTCC
ACGACTTGCCACTACACCAGCATTTGCAAATGATCAATCAATGATCAGTG
AGAACGCCTGAAGACTCAAAAGGGTTAATGTGAAGACAACAACAACAACA
ACAACAACGTACGTTGTAGACCACGGATAAGCATGCTCAAAAATGCTCGC
CGTTGGTGGCAGCGGGATGCTAGCATACAAAAACCAACATAAGTTGTAGG
GTCGGTCTTCGAAATAAAAGCGTACTAGTAATTTACGTGTGTCTCGGGAG
ATTCCAAATATCCGTGTTGACGCCGCCGTGATGAGCAATATGACCTGGTT
GCTTTGGACACTTCTGCTGTTGTGTAGAACTGCTGTGTTTTGAGAATGTC
TTGCCCTGTCCACCTCTTGTGAGGTTTAGGATTTTTTTTCAAGAGGGTTA
GGGTTGCTAACCATGTCCTGATAATCTTGCACACTCAAATGCTGTCTGGC
GCAGGCCCGTTCCGGCGACTTGCCACCGACTGCTCCGCGTGCGGGTGGAA
CTTCGTCGGCAACGCCAGCGTTCTCCCGACATGAATCAGCGACAGCGGCA
GGCGAGGGCTCGGCTCAAGAGAAGGCAGGAACATCTGGGCCCAAGACCGG
CACAAAGGCGGGTGTCGGGGCAGATGTGTAGTTGAAGGTGTGTGCGTAGC
TCAACGAGAAGGACATATATGGATGTCCCGGCTGTGGGGCGTCCTCCGTC
GCTTTCCTATCGCCGCCGTGGTGTTGTGTATCCTGTTCGTTACCCCTCTG
GAGGTCATGTTTTTTTTTTTTTTGTGGAAGTTGTTCAAATGTCAAGTAGT
TGACTGCCCTGATTTTTTACCCATGGGTTGAGATTGCTCATTGGATTCGA
GCGCGAAGTTCCGGTGAGTCGTTGTGTCGGACCCACCATGACGCGTCGCT
TCCGCTTGCGTGCCTGCCGCCTTCCTTGTCCTTCTACCTCATATCATGAA
CCTCTTCCAGAAGCACCCAAGCACGGGCCTCAAAATCGGTGAGGCCCGTG
CTGACGGAGTCCACCTGGGCGTTGAAATCCTCAACGCTGTCCCGGCCTGC
CGGAGGTCAGTACCTAGCCCCCCCCCTCCCCCCCCCCGCGTCCGTGTGCG
TAGGTCCTTGTTGCCAACCCTTGAATCCGGATTATGAGGCGTATGTGTGG
GTGGCTTTGGCTTCCACGTATATAGGCTAGCGTAGGTGTCACCATTGGAT
GGTAGGGGTCACCATTGGATGTTGTTGCTTTCACAGAGAGTCGGTCATGT
GAAGTCGATTATCGGCTGTTGCTGTTGAACTACACCTTGGGTGTTTTCAT
CGCGACTTAGCAAGGTCTATGTCTCACAAGGTGTGTGCTACCTCGACGAA
CGTAGACGGGCGTTTTCTCACATAGTGCCCCCTTCCTTCTGGTCCGCACT
ATGCCTCGCAAGGACCCTGCGTTCAAGGGATTTAGCGACAGGTCGTTTAT
GATGTGGAAGCGCCATATCCTCATCCCCTTCGAGGCCAACCTGAAGCTAA
ACGGAAATTACCAGGGAGACTCCACGGTTGTCCTTGACCCCGGGAGCTTC
GTCGCAATCCAGAAGTATGTGGGCAGCCAGAAACAACAGTACTCGGCGGC
GCAGAAAAAGAATCACCACGGTACGGGGTCTGCTGCTCCGGCCAAGGAGG
CGACAAAGCCGTTAGTCATCGCGCGGGCGAAGGTCTGGTCGGACAACAAG
TCGTGCCACTAGCCGCCGTCGACGCTAGAGGCTAGCGGGGGGCCTCTACA
CTCCGAGCTGTCCCCGCCTAGCACCCGGCACGCCGCCAGGGACGGTGAGG
GGGGAGGGGGGGGCGAGGATGGCGGCTCCCCACCACCGGACTTCGGGGGG
GGCGAGAATGACGGTGCGCTTGAGCTTGACGATGATGAAGCCGAAAAAGG
ATTCAGTCAAGGGACGCCCCCAGCTGGGACCATGGGCGGGGGCGGAGCGT
CTAAAGGCAAGGGGAAAGGAAAGGCGGGAGGAGGACAAGCCAGCGGCAAC
GGGAGAGATGGCGGCGGCACCCCGCGTCGGGACAGGGGACGGGGGGGGGA
GCTGCCGAAGTTGACGGCGTCGACCATGCAGGCTTTCGCTCGGGGTAGCG
GGTCCGAAGATATTGCGGGGTACACCAACCGGTCTGCCAGCGCGATTGAG
TCGGTCGCGAGCGCGTTGCTGGGGGGTGGCGGGGCTGCAGCCGGGGTTGC
AGCCGGGTCTTGGGGCCGGGCTTCAGCCGGGGCGTCTGAGGAAGAGCGCA
AGTGGCGAAAGGAACGCGAACTCCTCGGTCTGACGGTCGACTACCAAAAC
AATAACAAGGACCGTAACATCCACGGACTGATTCAGAAGACGTTCAGGAA
ACTCGTATGCCTCAGCGACGACGACGAGGGTGGGGACGCCGACGACGCGT
AGATCTCGCGCCTCTTTTATATACTCGAGTATGTGTTTCGGCCTTTTCAT
TTTTTCTTCGGGTTTTGAGTGCGACGCGTTTTTTTTTTTTTCTCATTTTT
TTGCGGGGGGTGGGGGGATAAGTACTTCTCGCTCTGCTGTTGTCATGCAG
ACGTGTTTGGGTTAGTTAAAGAATGGGGTGTGGTGTCGCATGTCGAAGGT
GTTGAGGTTAGGGGGGGTTAGGACAAGGGTTTGGCGGCCGAGGTGTTTGT
CTCAACTCGGGTCCGCGTCTTGCGGCGCTTCCGTCTCAACTGGGTCGTTT
TGACTTTCGTTCGTGTCTCTTTCCATGACCGTTTCCCTTCGCACGCGTTT
AGAGGGCATTTCTTGGTTAGTTTCCCCTGCAGTTTGTTCGGGTAATTGAC
GTATCTGGGTAAAGTGTGTCCTTGTTGTGGTCAGGAGAGAGGGGGGCGGT
GGTTGATTTCTTCTAGCTTGATATGGTGAGTCGCTCGTATCGCGCATCTT
TTTCGTCTCTGGTGTGTTCCGTTGAGGTCATATTTCCTGCGCTTCTTCCA
TAAGTTCGTCCTCTATTCCTGAGTTTTCGGGTCTGTTTTTGTCGTGTTTT
TTCCCCTTAACCTGCGTAGTCGCACAGGCGTTTTGAACTTCTGCGAATTG
CCGCGCTTCTGTTTCGTTTCTATGCGTCGGTCGTTCCTTCCTCCTGTTCG
TATCTCTCTTCATGAGTCTCCGCTTTCGCTTTTTCATGGGGGGAGAGGGA
AAGAGTATCTCCGTTGTTTTCGCTTTAGTTTTTGTAGTGTTTTTTTTTTT
ACAAAGTGCGTTCTTGTCGTGGTGAGGACAAGTTAGGGGGGGTGGGGTGG
GGGGGGGTAGGGGTGCGGAAGTCCTTCTCTCTCAATTTGGCGAGTCGCTC
AGGGGTCGAGGTTCGATGCTCAACGACACGCGTGTTGGACCCGACATAGA
GTCCGGGCATAGCCGCGTTTCTTCCTCGTTTCATAGACTGAAATGCTAGC
TTATATGCGTCGATGGGATGCCGAAAGCCGTAACGCCAACGTTTCAGTGG
GATTCTGATTGCAAGGTTAGGTTGAAACTCTATTGTCTTATATTCCAGTG
GGAATATGACTGAGGATTTCCTGAACTGAGTTGGCGCTCATGCGTACTGA
TGTATTGGAGGTTGGGTTTGACGTGTCCTGGCTGTTCAGGGTAGGCGTCT
AATGTGCTTTCCGAACATCGACCTCGCTGGTCAAGAAGTTGGAACCAGAT
TGCTTTTTTATTTAACATTTCGTTCTGATGTACTCATCATTTTACCGGGG
TTGACCGTCGCGACGATCGAGATACAGTTCTGATGAAGCGTTGAGTTTAA
TGTTTGTTATTTTTTCGAGGTGAATTCTGTTGTTTTGGCAGCTTGAGATT
TTATCAAGAGGAGTTAATAACATGGGTTTGGACTGGTGTTTGGTATGTAG
GGGCTTTTTTTTGTTGCCATTTGAACGGTCCTAACGGTAAATTTGGCTTT
AGCGGTATCTTCGCAGAACAGGGTGTGTGAGGTGCGCAGTTGGTACAAGT
GTCATGTGCATGTCACAGGGGTTCGAGCACCCTGTTGTCGCTCTGCTAGG
TGAACGTACAAGTCAAGTTTGTCGCAAGAGGCGCCTCCGGCAATAGTCCG
AAGCGTGTTGGGGTAGGTCACGCCAACGAAATGCAATATTTTCGTCTACC
GCGGAAGTGTTCTCGGACGCAAGGCAAGACAACAAGAGGAGTCCCTCTCT
CCCTCGTGGGATTTGCCATTGCCCGTTGCCGGTGACGTGTGGACTGCCGT
CACGGCGGTAAAAAATTTAAATTATCAGCTTT

Coding sequence (CDS) from alignment at chr_00:6528174..6537255+

>Ec-00_004750.1 ID=Ec-00_004750.1|Name=Ec-00_004750.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=456bp|location=Sequence derived from alignment at chr_00:6528174..6537255+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAACCGGGGGAGCCAGCGGTGGACTTTCTCAGCAGGCGCCTGCCGCG
AATGCGCGGCGGGCCGCTTCCGGCTCTGGAGCCTCGAAGGACGGGGCAGC
TAGGTCGGGACGCGGCGGCGCTACTCGATCGCGGCCCGTCGTACCTCGCG
ATGGGACCTCGGCAGAAGACGGCAGCAACAAGAAGGCCCGTTCCGGCGAC
TTGCCACCGACTGCTCCGCGTGCGGGTGGAACTTCGTCGGCAACGCCAGC
GTTCTCCCGACATGAATCAGCGACAGCGGCAGGCGAGGGCTCGGCTCAAG
AGAAGGCAGGAACATCTGGGCCCAAGACCGGCACAAAGAAGCACCCAAGC
ACGGGCCTCAAAATCGGTGAGGCCCGTGCTGACGGAGTCCACCTGGGCGT
TGAAATCCTCAACGCTGTCCCGGCCTGCCGGAGGACCCTGCGTTCAAGGG
ATTTAG

Synonyms

The feature 'Ec-00_004750.1' has the following synonyms


Synonym
Esi0364_0012
Esi_0364_0012