Ec-00_004640.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004640.1
Unique Name	Ec-00_004640.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	1034

Homology

[Close]

BLAST of Ec-00_004640.1 vs. uniprot
Match: D8LLH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH6_ECTSI)

HSP 1 Score: 1344 bits (3478), Expect = 0.000e+0
Identity = 837/977 (85.67%), Postives = 840/977 (85.98%), Query Frame = 1

Query:  343 MSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDGVAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAAAADGAPSSSADGNAGSGADAPAADXXXXXXVEIPPPSAAPAVMELSEEADCDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQEDGDDGSGSVGSGEQRPSKKARKSAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDDDGDXXXXXXSQAGDENGGGXDKEGPSXXEKNSTAEKDAAGREAAKTEGSGSPTKKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEGQKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDDENCPFNACSRCWEEGHLADACPYVDVMEEGPEPYXXXXXXXXXXXXXXXTACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNSSAXXXXXXXXXXXXXKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGTSNHYNRNDQPRVPAADWKQEWSASNNNTLSFNSPSQNHGSRKFRNDPMGSGQQHQHRAQQPTHLPSAYLNDLAQPPSPLQPTRRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSNGGSSSGTLHRAYHPGGNFGSDSXXXXXXXXXEDRHRSSGHRGERXXXXXXXXXXXXXXXSSRGQKGGYHSYSRDQHQPAXXXXXXYSHHSSGSHQCSRYSSGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY 3273
            MSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDGVAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAAAADGAPSSSADGNAGSGADAPAADXXXXXXVEIPPPSAAPAVMELSEEADCDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQEDGDDGSGSVGSGEQRPSKKARKSAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDDDGDXXXXXXSQAGDENGGGXDKEGPSXXEKNSTAEKDAAGREAAKTEGSGSPTKKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEGQKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDDE            EGHLADACPYVDVMEEGPEPY               TACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNSSAXXXXXXXXXXXXXKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGT  H+N                                             G  HQH+ +                                                            RGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSNGGSSSGTLHRAYHPGGNFGSDSXXXXXXXXXEDRHRSSGHRGERXXXXXXXXXXXXXXXSSRGQKGGYHSYSRDQHQPAXXXXXXYSHHSSGSHQCSRYSSGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY
Sbjct:    1 MSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDGVAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAAAADGAPSSSADGNAGSGADAPAADXXXXXXVEIPPPSAAPAVMELSEEADCDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQEDGDDGSGSVGSGEQRPSKKARKSAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTGTRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDDDGDXXXXXXSQAGDENGGGXDKEGPSXXEKNSTAEKDAAGREAAKTEGSGSPTKKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEGQKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEPEQAAKATNKAKPLEETRCTLCGAIGHDDE------------EGHLADACPYVDVMEEGPEPYCSVCGKAGHSIDACETACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNSSAXXXXXXXXXXXXXKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGT--HHN--------------------------------------------GGGYHQHQQE------------------------------------------------------------RGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSNGGSSSGTLHRAYHPGGNFGSDSXXXXXXXXXEDRHRSSGHRGERXXXXXXXXXXXXXXXSSRGQKGGYHSYSRDQHQPAXXXXXXYSHHSSGSHQCSRYSSGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY 859

[Close]

BLAST of Ec-00_004640.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.740e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = -2

Query: 7154 VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 7303
            VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY
Sbjct:  585 VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634

[Close]

BLAST of Ec-00_004640.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.420e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = -2

Query: 7154 VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 7303
            VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY
Sbjct:  822 VTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871

The following BLAST results are available for this feature:

BLAST of Ec-00_004640.1 vs. uniprot

BLAST of Ec-00_004640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LLH6_ECTSI	0.000e+0	85.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LLH7_ECTSI	1.740e-21	100.00	PINc domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JRN9_9PHAE	3.420e-21	100.00	PINc domain-containing protein n=1 Tax=Ectocarpus ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:6397508..6410452 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	7306
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004640.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640	Ec-00_004640	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 6397508..6410452 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640.1	Ec-00_004640.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 6397683..6406423 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640.1.1	Ec-00_004640.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6397508..6397939 +
Ec-00_004640.1.2	Ec-00_004640.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6398488..6399285 +
Ec-00_004640.1.3	Ec-00_004640.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6400227..6400676 +
Ec-00_004640.1.4	Ec-00_004640.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6401274..6401379 +
Ec-00_004640.1.5	Ec-00_004640.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6402148..6402273 +
Ec-00_004640.1.6	Ec-00_004640.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6402925..6403059 +
Ec-00_004640.1.7	Ec-00_004640.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6403414..6403640 +
Ec-00_004640.1.8	Ec-00_004640.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6404333..6404476 +
Ec-00_004640.1.9	Ec-00_004640.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 6405565..6410452 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640	5UTR:Ec-00_004640.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 6397508..6397682 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640.1	CDS:Ec-00_004640.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 6397683..6397939 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004640	3UTR:Ec-00_004640.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 6406424..6410452 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:6397508..6410452+
coding sequence from alignment at chr_00:6397508..6410452+

mRNA sequence

>Ec-00_004640.1 ID=Ec-00_004640.1|Name=Ec-00_004640.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1034bp
MPLRGYAESTTQNVYHTPSSELRWSPLPHAQATRLESREGTPRGALLPPV
LSTTQAMSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDG
VAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAA
AADGAPSSSADGNAGSGADAPAADDDDDEVVEIPPPSAAPAVMELSEEAD
CDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQ
EDGDDGSGSVGSGEQRPSKKARKSAGAKAKDSDGGSEGGSDDDTSEGVDA
DESKGDDGGDSGEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTG
TRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDDDGD
DGDDGDSQAGDENGGGGDKEGPSDDEKNSTAEKDAAGREAAKTEGSGSPT
KKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEG
QKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEP
EQAAKATNKAKPLEETRCTLCGAIGHDDENCPFNACSRCWEEGHLADACP
YVDVMEEGPEPYCSVCGKAGHSIDACETACKGKSQLKFSCITCRDDGHTQ
CGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNS
SAGGGNRRKSTGGGGKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGTSN
HYNRNDQPRVPAADWKQEWSASNNNTLSFNSPSQNHGSRKFRNDPMGSGQ
QHQHRAQQPTHLPSAYLNDLAQPPSPLQPTRRDGGAAAFSGPPSPPYHHR
NHNSHHNGGGYHQHQQERGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSN
GGSSSGTLHRAYHPGGNFGSDSSGGGGGRRVEDRHRSSGHRGERYSSSRG
GGDRHSGGGSSRGQKGGYHSYSRDQHQPAPTPSPSYSHHSSGSHQCSRYS
SGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY*

spliced messenger RNA

>Ec-00_004640.1 ID=Ec-00_004640.1|Name=Ec-00_004640.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7306bp|location=Sequence derived from alignment at chr_00:6397508..6410452+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCTGAGGTCCGCAATGGACATGAGCGAGCGCCCGGCCAATGACTTCACGC
CTTGCACACCAGTCATACTGCCAGTTTTCGAGGGAAAGGAAGGGAGAGTA
GCGTGTGTGGGGCTGCTGCGTGTGCTGTCTGCTGTGCAGTGTGCGATGTG
GAGGATGGCGAGAGGATAAAGATGGATGCCTCTTAGGGGCTACGCGGAAT
CAACCACCCAGAACGTGTACCATACCCCGAGCTCTGAGCTGAGATGGTCA
CCTCTGCCTCACGCACAAGCCACCAGATTGGAGAGCAGAGAGGGGACGCC
ACGAGGAGCGCTGCTGCCGCCAGTTCTATCAACCACACAGGCCATGAGCC
GCTTAAGCTACAGTGAGACCCGGGATGGCATAGTGCTCGGCGTGTCTGAG
GAAGGGGTAGAGACGAAAGGGCCGTCAAACAGCGGTGGCAAACGAAAGCG
AGCGCGGGACGACGACATCGATGGCGTGGCGGAAGCAGAAGCGAACGGCG
GGAGTGGTGGGGCGGCGAGCCCGGGCGCAGACTCACTCAGCTCTTACTCA
CTCATGGGTGTCGCCGACGGAAACGACGGCAAAGATGCTGCCGGAGGGGT
AAGCAAGGTAGAGGTGGAAGCAGCGGCTGCCGACGGGGCACCATCGTCAT
CGGCTGATGGGAACGCCGGTTCTGGTGCTGATGCACCTGCTGCTGACGAC
GACGATGATGAGGTGGTAGAAATACCGCCGCCGTCAGCGGCACCGGCAGT
TATGGAGCTGTCGGAGGAAGCAGACTGCGACTCAGGAGGTTTCAACTCTG
GTCCACCAGGTACAGCTGCGGCCCCTATCTCGATAGAATCTGGTGAGGCT
CCGCAGAAGAAGAGCAAGGGTCGCATATCGAAAAAAAAGCAGAAGGCTGT
CGCGAAAGAGTTGGAGGCTCAGCAGGAAGACGGCGACGATGGTAGTGGGA
GCGTAGGAAGCGGAGAGCAACGCCCCAGCAAAAAGGCCAGGAAATCGGCC
GGTGCAAAGGCTAAAGACAGCGACGGTGGCAGCGAAGGCGGCAGCGACGA
CGATACCAGCGAGGGGGTTGACGCCGATGAGAGTAAGGGTGACGACGGTG
GGGACAGCGGTGAAGGGGACGGGTTGGAAGGGCCAGTTTTGTTCGCGGTG
GGCCAGCCGATGTCCAAGAAGATGAGAAAGATGGCGAAGGGTCGCCTGTC
GAAGTGGGCCTTGAAGTTCACGGGAACGAGGACCTACGCGCCCCCGGCCG
TGCCGGTCATCGAGCCAATCAACGACGACTATCTCGCCAGCTTCGGGCGG
TCCTACGCCGAAGCAAAGAGCCTCACTGCCCAGGACAAGAAGGAGAACAC
AGCTACGCAAGACGACGACGGCGACGACGGCGACGATGGCGATAGCCAAG
CCGGCGACGAAAATGGTGGCGGCGGCGACAAGGAAGGCCCTTCCGACGAC
GAGAAGAACAGCACTGCCGAAAAGGATGCTGCGGGCCGTGAAGCGGCCAA
GACTGAAGGTTCGGGCTCGCCGACGAAGAAGAACAGTCTCCGCGGCGGAC
GGAAGAAGCACGGCGTGTTCGTTGTGAATCTGCTGTACACCTTGTGCGAC
GAGGAGAAGCTGGAAAGTCTCTTCAGCGCGTTCGGGCGAGTTACTGCGGT
CGTGCTGACCAGACCCCCCGAAGGACAAAAGGTGTCCGGCATCGCTAGCG
TGTACTTCGACACGGCGGAGGAGGCGCAGAAGGCACTAGCCGCGGACGGC
ATGGACATTCGTGGACGCTGTGTCGGCATACGAGAGGTGAGGCTGAGTGT
CGACAAGAGGTACTTCGTCGAGCCTGAACAGGCGGCCAAGGCTACCAACA
AAGCTAAGCCCCTGGAGGAAACGAGGTGCACCCTGTGTGGGGCGATTGGG
CACGACGACGAGAACTGCCCGTTCAACGCGTGCTCTCGCTGCTGGGAGGA
GGGGCACCTCGCGGACGCCTGTCCCTATGTTGATGTGATGGAGGAGGGAC
CCGAACCCTACTGCTCGGTGTGCGGCAAGGCTGGTCACTCGATCGATGCT
TGCGAGACGGCTTGCAAGGGCAAGTCGCAGCTCAAGTTCAGCTGCATCAC
CTGCAGAGACGATGGCCACACTCAGTGCGGAAAGGAGACAATCTTGGTGT
TCGGGAACGAGAGAGGCCACGCCATGACGTGCTGCAACTGCGGCCTGGAA
CGCCACGACTGGCGTTCCTGCCCTCATCAGACGGAGGCTGAGATCCTTCG
GGAGTGCGGCTACAGGTTCAACAGCTCTGCGGGTGGGGGCAACCGACGGA
AGTCGACGGGAGGGGGGGGCAAGACCTACATGGTGTGCTACAATTGCGGC
AAGCAGGGGCACGGCAAATCGGAATGTCCGGTACCGAGGCAAACCCAGAC
CCCCGGTCGCTTCGGAACTAGCAACCACTACAACCGCAATGACCAACCCC
GTGTCCCTGCCGCGGACTGGAAACAAGAGTGGTCCGCAAGCAACAATAAC
ACCCTCAGCTTCAACAGCCCGAGCCAGAACCACGGGAGCCGCAAGTTTAG
GAACGATCCTATGGGGTCCGGCCAGCAGCATCAGCATCGGGCGCAGCAGC
CAACGCACCTACCGAGCGCGTATCTCAACGACCTTGCGCAGCCGCCCAGC
CCCTTGCAACCCACGAGGCGGGACGGTGGTGCTGCCGCCTTCAGCGGTCC
CCCGTCGCCCCCTTATCACCACCGCAACCACAACAGCCATCACAATGGGG
GAGGTTACCATCAACATCAGCAAGAGCGCGGCGGCACACACAACCGGTAC
GAGCACCAGATGGCTTCTCCGACGGACTCGCGATCATCATTCCCCAGGTG
GGGTGACAATGGCGCCGTTAGCAATGGCGGCTCCAGCAGCGGCACTCTTC
ACCGGGCGTACCACCCTGGAGGCAACTTTGGCAGCGACAGCAGCGGCGGC
GGCGGCGGGAGGAGGGTGGAGGATAGGCACAGGAGCAGCGGCCACCGTGG
GGAGAGATACAGCAGCAGCAGGGGCGGAGGTGACAGGCACAGCGGGGGTG
GGTCATCACGGGGTCAGAAAGGAGGTTACCACTCGTACAGCAGAGACCAG
CACCAGCCGGCTCCAACCCCGTCACCTTCTTACAGCCATCACAGTAGTGG
TAGTCATCAGTGTTCTCGCTACAGCAGCGGACAGCCATACTCCTCCGGCG
GGCAGTCATACTCCGCCGGCCGACGTGGGGGCGGGACAAGGGACGCGCAC
GCCAGTCCTAGAAGCTACGGTTACTAACTATCGCAATGAACTTTGTGGCA
GCCAGGATGGTGGTGGTTGTGGATACTTTGGAGGACCCTGATGATAGGAT
TCACGGCCATTCAAGCACGTGAGACAGGCTCGCGCCATTTCCACCTGCTA
CCTGTTGATTGTCTAGAGGGAGCGCTGTATACCCACGGTCACGACCGTTT
ATGGGGTCCAACACTCGCACCTGAAGGGCTTGATGCACGATGCCGCCTCA
ACAGTGTCCTCCCTCTGCGGTAGTTGCAGTAGATGGAATAGCCCGGCTGC
CCCCTCCCGCGAAGAGACCCTCCATACCCAACACGAAGAGAACCGCGAGG
GAACATGATGTGCCCTAGCGATCCTTTACGTGGTATTGTAGCCCGCAGGG
TTTTGATAACACCACGGTCTTTTGTGTTTATTGGGTTGTGTTGTGTTCTG
TTTTTTACGCTTTTCTAAATATTTGTTCGGTTTAGGTGGTCCACTGGCAA
ACCTTGTGACAAGGGGTGTGTGGTCTCAGTCCAAATTGACGAACTACGCT
TGAGCGAACGCTCAACGTTCCTTGTCGACGGGGAGAGGGAAGGAGGTGTG
CATGCAGTGCAAACCATGCAAGCCACGCGAGCCACAGGATTTCCGAGAAA
TTCGTTCTCCCTACCCTCGCGGGAAAATCGTTGCCAAGGGCCTATGGTGA
CTGTGGACATGCGAAATTGTCCCAGAATTTCTTCTGGCAGGGCACGGTTG
ATCCCTCTGCCGGTCCGACAAATGTGGGAACTTAAACTTACGCCCTGCCA
TAAGAAAGAGGGTAATTTCGTTACTTGTGGAAAATGATGTGCAAACTGCC
GAGAGGTCTACTGTAGCTATCCGCGTTAAACCCGGGACGGCGCCGTGCTG
AGTGTACATGACGGTACCGTCCTCTCTTGTTGTAATTGTTTCGAGTGCGG
CAGGGTGTTGTTTGCAGTTCAGACGCAGATATCACGTGCACACGTGAGAC
ACGTGGTAGAATAGTGCATGTTGTCGCGGAAGCGTCGGAATTTCTTTGAA
TAGTGTCCCATCTCGCACAAGAGGTTCGGCTTCCGCCCTCGAGACGTTTG
GCGTCCTCAAGTCTCGCTTTGTTTCTTACCGGACCAAAGGACAAGGACTC
ACAAGCAAGCCTCTTTGGCAAATGGCGAACTTTTTGTTGGTGCTTCATTT
GCGAAGAGGCCGCGATCAGGGACGAACGGGCAAATGACGCACCGGGTGTC
CAAACCTACTGCGCAAGGATGTATAACTAAGCATGCATGCGTTTTGTAGA
CAAGACGATGTACGTGTGTTGTCTAACAATAAGCCCGTATTGATTGAGGG
GAGGCAGGTGCCGAAAAAAACACCCAACCACGCCGTTGGAAACGACCATG
TGCACGTATTCCCAGAAAACAAATTCGATTTTGCGTGCTTCGGAGTATTA
GCAGGGGAGCCGTCACCGTAGATTCTTGCCATGTGAGGATCGGTACAAAC
ACCGCGTGATCACCATGAAAGGACGCATTCTTTCTGTTCAATATTTTTTT
CGAAGTAGCCTCTAGCATATTAAATGCACGTACAGCAGTGCAAGATGATT
TTGTTGTTGGCGGTCATGTGTGTTTTCATGCTCAGTGACGCTCAATGCCG
ACGCCCGGTGTGCCAGTGGCCCTACTCGCTGCGCCCTAAAGAGATGCACC
GCGTATAAAGTGGTACCAGGACTTTCACCCTACACAGGGCTTAGTTAAGG
GTGTATGTTGAAGGGTACATGGTGATGCCTGTCAGGGACGGACATCCTCA
GGTATGGTCAGCTTCTTGCGCCCAAATGGCTGGGTAGCGCCGGTTGGAAC
GAAACACACCCGTCGTGTTGTGTTTAATCTATGTATGCTGGATCACCAGC
CCAAAAGGTGTCTGGAACTAACGGGCCGGGCGGGGGTTGTAGCCTCGGCC
TCAACTCAAGCATTTTTTTTCGCGAGGCGGAGAGCTAGGGCCGTGGCAAG
GGCAAGAAGAATGATTGTTGGTGTCGATGATGCTAATCTGTAACCTGGAA
ATGTTCTTCCAAGATTTTCTGCAATTAGGCTCATACTACTGTATGGCCCA
CCGCCGCGTCTGACTTCACAATTACCGTGGGCGTATTAATGCCGAACAAC
GTTAATCATCAAAGGTGTGCGGGCCCCCTAAACGGACGCAGCAAACAAGC
CCTTCGTTTCGCACGGGAAGCCTATTTCATGCAGGAAAAGGGTGGTATTC
ATTGCACGCAGATGTTCGCAGTTCGTGGCGGAGGACCTGCAAACAGATTA
TCAGTGACTATGTTTGTTTTGTTGTTTCTCTCACATTAGCTCTATAGTCC
ACAAAAATGGGGAGCCCGTGGTCGCAAAACCCGGCACATACGACGCCGCG
GGGAAACAAAACAAGAAAAGGGTACGAACCACTCGGAAACAGAAAACGAA
ATGATAGAAAAAGAACAGCTACCGCACCGACCGGTCGAGAAAAGGAGCCC
TAGGAAACCGATCAAAATAAAACAAAACAAAAATAACGGCAAAAATAAAA
AGGGAAACAGGGAAAAAGGAGGACGCTTCCCACACCCGCCTAAAAAAATC
AAAGGGTACCGTACCAGCATCAGGCACTACGCACCAGGGCATGGGAGTAA
TGGAGGCAACAGAACAAAACAAAGAGGCGGCAGATGGGCAGACAGCCATG
TGTGACTATGCACCTCGCATGCACCTCACAGAAATATACCGCATTATCCA
CCACAGCAGTATATAACCACGATGAACCACCGCTAGTTTGTATGCACCAG
AAACGCATATCCATCCCTGGTAACTGGTACCCCATAAAACACTATCACCC
CAAATCTTTCAGTCTTGGCTGTAACGGAGGTGTCGCGAACTATGTACAAT
GGACAGGTGTTGCCAACACTTGTGAAGTGGAAGGAAAGGGCGATTGTACC
AGTTCCGAGGCCCAGATATTTCGATTTATTTTTATTTTTATTTGTTCGAC
ATCGGATACGCATGAAGAAAATACGCAGAATTGACCTGATACAGGGAAAC
ACAAGCGAATGCGAAAAAACTCGAAAGGTGAGACTCGCCCTTTAGCGATA
AATCTAACCAGTCTCTCACAGCGAGTACACACGTTTTGCGATCATCCATG
CAAATCATTTGCAATCAATAGGTTTTCAAAAATGCAATTGCCCAGGTACG
AGCCCAGGTACAAACACGCACCAATCACTCCTCTCTCCCCGTCTGCCGTA
ACACAACAGCACTGATCATCTAAGTCATGATGATCTGGCTAGGCTATCAA
ATATGACCCATTTTGATGCGTTGAAGAGGGCCCGTCTCCAAGACGGCTCT
CGCCAAATATCGTCTCCGAAAACAAGGTACATTGCATCACATCACCATTC
CGATATGTTCATCCTCAGAAAAAACAACACAGGGCGGCGGCACAAGGGCC
AGAGAGACATGGTGAACGCCACTAAGCCCGAAAACAATGGGTACTGAAGC
AGGCAAACAGACGCCAACTCGTTCGTTTGTTCGGCAATGCTTGCCCCAAA
TCACCCTCACGTAACAACAGAACGACGGAGAACACACCAAGTCCCGCCCC
CACAACAACTCTTCCATGGCATTGCACATGAGGGGTGTCGTACCACGGTA
CAAAGGCCGTGATCGTCTCAAGTCATGGCCCATCCGACAGTGGCACCCCC
GCCTTCCGACTAGCGCTAACATGAGTGGGGTGGGGAAATCAAATGACTGC
GATCGATTTCTCGAATGCCGAAGTCGTGATTGATTACGAACCCTACCCTT
CGGTGCCGATCCCTACCTAGTACGGTCGTGGAAACATCAGGCGGCAACGG
TCCAAAGGGAGAGAGACATGATACATTACTTCACCTATGGTGCCTTCTCT
CATCAATAGCCGCGCGAGAACGGGGAAGGGCGGGGAGGGGCAGGGCAGAG
GGGCATGCGGCAATGCCCAGGATCGCATTGCGGACGGCCAGTGGTCGTCA
ACCCGTGCGCGGTGGCGCGAATGGCGAAGTTGTTGTCGCCGGTGACGAGG
GTCACC

protein sequence of Ec-00_004640.1

>Ec-00_004640.1 ID=Ec-00_004640.1|Name=Ec-00_004640.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1034bp
MPLRGYAESTTQNVYHTPSSELRWSPLPHAQATRLESREGTPRGALLPPV
LSTTQAMSRLSYSETRDGIVLGVSEEGVETKGPSNSGGKRKRARDDDIDG
VAEAEANGGSGGAASPGADSLSSYSLMGVADGNDGKDAAGGVSKVEVEAA
AADGAPSSSADGNAGSGADAPAADDDDDEVVEIPPPSAAPAVMELSEEAD
CDSGGFNSGPPGTAAAPISIESGEAPQKKSKGRISKKKQKAVAKELEAQQ
EDGDDGSGSVGSGEQRPSKKARKSAGAKAKDSDGGSEGGSDDDTSEGVDA
DESKGDDGGDSGEGDGLEGPVLFAVGQPMSKKMRKMAKGRLSKWALKFTG
TRTYAPPAVPVIEPINDDYLASFGRSYAEAKSLTAQDKKENTATQDDDGD
DGDDGDSQAGDENGGGGDKEGPSDDEKNSTAEKDAAGREAAKTEGSGSPT
KKNSLRGGRKKHGVFVVNLLYTLCDEEKLESLFSAFGRVTAVVLTRPPEG
QKVSGIASVYFDTAEEAQKALAADGMDIRGRCVGIREVRLSVDKRYFVEP
EQAAKATNKAKPLEETRCTLCGAIGHDDENCPFNACSRCWEEGHLADACP
YVDVMEEGPEPYCSVCGKAGHSIDACETACKGKSQLKFSCITCRDDGHTQ
CGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQTEAEILRECGYRFNS
SAGGGNRRKSTGGGGKTYMVCYNCGKQGHGKSECPVPRQTQTPGRFGTSN
HYNRNDQPRVPAADWKQEWSASNNNTLSFNSPSQNHGSRKFRNDPMGSGQ
QHQHRAQQPTHLPSAYLNDLAQPPSPLQPTRRDGGAAAFSGPPSPPYHHR
NHNSHHNGGGYHQHQQERGGTHNRYEHQMASPTDSRSSFPRWGDNGAVSN
GGSSSGTLHRAYHPGGNFGSDSSGGGGGRRVEDRHRSSGHRGERYSSSRG
GGDRHSGGGSSRGQKGGYHSYSRDQHQPAPTPSPSYSHHSSGSHQCSRYS
SGQPYSSGGQSYSAGRRGGGTRDAHASPRSYGY*

mRNA from alignment at chr_00:6397508..6410452+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004640.1 ID=Ec-00_004640.1|Name=Ec-00_004640.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12945bp|location=Sequence derived from alignment at chr_00:6397508..6410452+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCTGAGGTCCGCAATGGACATGAGCGAGCGCCCGGCCAATGACTTCACGC
CTTGCACACCAGTCATACTGCCAGTTTTCGAGGGAAAGGAAGGGAGAGTA
GCGTGTGTGGGGCTGCTGCGTGTGCTGTCTGCTGTGCAGTGTGCGATGTG
GAGGATGGCGAGAGGATAAAGATGGATGCCTCTTAGGGGCTACGCGGAAT
CAACCACCCAGAACGTGTACCATACCCCGAGCTCTGAGCTGAGATGGTCA
CCTCTGCCTCACGCACAAGCCACCAGATTGGAGAGCAGAGAGGGGACGCC
ACGAGGAGCGCTGCTGCCGCCAGTTCTATCAACCACACAGGCCATGAGCC
GCTTAAGCTACAGTGAGACCCGGGATGGCATAGTGCTCGGCGTGTCTGAG
GAAGGGGTAGAGACGAAAGGGCCGTCAAACAGGTGCGAGAAAGAGTTGGT
CCACAGAGAGCAGCATCACCCACAAACACAATGTGTTCGTGAACGATCTC
GTGTAGATACCCTAGATATGCGTGTGCATGCCGCCTGGTTCAACGTGCAT
GTCAGCCGCATAGAATCGTCACAGCAGTAGTAGGATAGTCGAAAGTTGTA
GCAACGCTTTCGTGCGAATGTTTAGCTTTGATTTGCCGAACTGCAGCGAT
CCTGTTTTTTTGTTTTTCCGTGAGTGTCCAACAGCAGTAACGCCTTCAAG
CGGACACACCGCCTCGAACGCAAATGCTCTGTACAGGTTCGGGAGGGGGT
CTGCCTCGGCGACCAACTTTGATGCCTATCAGTTGATGTACTGTATTCGA
ATAGCGGTAGGTAGTTCCAATCCTTCCTCACCGATGAAATTCGAGGTTCA
TCGGGTTTGTAACCATCCAGCGGTGTTACCGACCAAAAATGCGGATTCAT
TGCCCCGTTCAGATGGCACCAAAAGGCACCAACAACGATCATTTCCCTGC
CCCCCTTCGCCGACTATTTTGAACTCTCAGCGGTGGCAAACGAAAGCGAG
CGCGGGACGACGACATCGATGGCGTGGCGGAAGCAGAAGCGAACGGCGGG
AGTGGTGGGGCGGCGAGCCCGGGCGCAGACTCACTCAGCTCTTACTCACT
CATGGGTGTCGCCGACGGAAACGACGGCAAAGATGCTGCCGGAGGGGTAA
GCAAGGTAGAGGTGGAAGCAGCGGCTGCCGACGGGGCACCATCGTCATCG
GCTGATGGGAACGCCGGTTCTGGTGCTGATGCACCTGCTGCTGACGACGA
CGATGATGAGGTGGTAGAAATACCGCCGCCGTCAGCGGCACCGGCAGTTA
TGGAGCTGTCGGAGGAAGCAGACTGCGACTCAGGAGGTTTCAACTCTGGT
CCACCAGGTACAGCTGCGGCCCCTATCTCGATAGAATCTGGTGAGGCTCC
GCAGAAGAAGAGCAAGGGTCGCATATCGAAAAAAAAGCAGAAGGCTGTCG
CGAAAGAGTTGGAGGCTCAGCAGGAAGACGGCGACGATGGTAGTGGGAGC
GTAGGAAGCGGAGAGCAACGCCCCAGCAAAAAGGCCAGGAAATCGGCCGG
TGCAAAGGCTAAAGACAGCGACGGTGGCAGCGAAGGCGGCAGCGACGACG
ATACCAGCGAGGGGGTTGACGCCGATGAGAGTAAGGGTGACGACGGTGGG
GACAGCGGTGAAGGGGACGGGTTGGAAGGGCCAGTTTTGTTCGCGGTGGG
CCAGCCGATGTCCAAGAAGATGAGAAAGATGGCGAAGGGTCGCCTGTCGA
AGTGGGCCTTGAAGTTCACGGGAACGAGGTGCGTTTGTTCCAAACAAACA
CCGGTGATAGTTGTATATACACCCCATGAAGAGCGGGAAAATGTCCATCG
CTCCGCGAAGAACGGTCGTCCACGTAGCACCACTTGTTTGTCGTGGGAGT
GCAAGCCGCTTTCTCGGCGTTCGTTTTCTCAATGTTCGCTAGCCCCCTCC
CCCCCCCCCCCCCCCCCCCAACCAAGACCCATCCCTTTTTTTTTTTTTTC
CAAAAACAATTCACCCCCCCCCTTAATAAACCCCAACAAAACCCCAATTT
TTTTCCCCTCTAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAACCCCCCCAAAAAAAGGCCAGGAAATTGGCCGG
GTCAAAGGGAAAAAAAAAGCAACGGGGCAAGAAAAGGGGCAAGGAACCAC
ATTCCCAGCAAGGGGTTTACCCCCAAAAAAAAAAAGGGGAACGCGGGGGG
GAAAACGGGAAAAGGGGAGGGTTGGAAAGGCCATTTTTTTTTGGGGGGGG
CCCACCGATTTTCAAAAAAAAAAAAAAAAAGGGGAAGGGTTCCCCTTTAA
AAGGGGCCTTAAAATTTAAGGGAAAGGGGGGGGTTTTTTTCAAAAAAAAC
CCGGGGAATTTTTTTTTTTCCCCCCCAAAAAGGGGGGAAAAATTTCCTTC
CTTCCGGAAAAAAGGTTGTTCCAGTAACCCCCATTTTTTTTTGGGGGGGG
GAAAAGCCGTTTTTTGGGTTTTTTTTTTTAAAATTTTGGTAGCCCCCCCC
CCCCCCCCCCCCCCCCCTCGTCCACGGCCCGTTCCCTTCTTCTTTTTCAG
CGACAACGATGCAAGCGCGCCCTTGACGAACCCCGACGAACACCCCAATC
GTGTCGTCGCTGGATGCAGGACCTACGCGCCCCCGGCCGTGCCGGTCATC
GAGCCAATCAACGACGACTATCTCGCCAGCTTCGGGCGGTCCTACGCCGA
AGCAAAGAGCCTCACTGCCCAGGACAAGAAGGAGAACACAGCTACGCAAG
ACGACGACGGCGACGACGGCGACGATGGCGATAGCCAAGCCGGCGACGAA
AATGGTGGCGGCGGCGACAAGGAAGGCCCTTCCGACGACGAGAAGAACAG
CACTGCCGAAAAGGATGCTGCGGGCCGTGAAGCGGCCAAGACTGAAGGTT
CGGGCTCGCCGACGAAGAAGAACAGTCTCCGCGGCGGACGGAAGAAGCAC
GGCGTGTTCGTTGTGAATCTGCTGTACACCTTGTGCGACGAGGAGAAGCT
GGAAAGTCTCTTCAGCGCGTTCGGGCGAGTTACTGCGGTCGTGCTGACCA
GACCCCCCGAAGGACAAAAGTGAGAAGTGCGGAGCATGAGCGAATCAGTT
TTCTTGCTACATTTTTCCCTTGTCCCCGCTCTCCCCGAGGTTGCGATGAG
CAGGAGCACCGTCAGTGCCGTTTACGATTGGAGCCATTTTTTACCAACGT
TTCGAGTGCTCTATTAAGCTTTTTTGCCATGTTCCCGGTTCTGTTGGCCA
CCTTTGTCGGGCATAGCGCTTTCTTCCGAACAAATCCCTCTGAAGGTCGC
GGGAGTGAGTGAGGGCATCTGTGTCGTTTCTTATGTACACAAAGACATGA
CTCCTGCTGCCATTCACCGCGGTTGCTACTATTTGTGCTGGTGTTCCAGA
ACGCCAACAATGATTTACAGCTGCGGGTATCTACGCTCGTAGCAACACGT
GTTTGATTTCCTAGGAGCTCCATATATTTTTGTTGCGCACACGTGTAATT
ATTGAGTCAGTTAGTATTCTGATGTCCTTTGTCCGACATGATGCCTGCGG
CATCTGATCTCCTGGGGCCGTATGCTTCTTAGTCTCTCACATTTTGTGGT
GCTTTCTCTGTATCTCATCGTCCGCCCTCTCCACCACCTCCCTTCCTCCC
ACAACCACGCCCGCAGGGTGTCCGGCATCGCTAGCGTGTACTTCGACACG
GCGGAGGAGGCGCAGAAGGCACTAGCCGCGGACGGCATGGACATTCGTGG
ACGCTGTGTCGGCATACGAGAGGTGGGCTCGTTGTGTTTTCTTCGACACG
GACGGAGTATGTCTTGCGACACACCGCAAGCGTCAGGGTGGTGAACACAA
GCCGTCTTATCCCACCTACCCCCCAATAGAACGGAGTTTGTCTTACGACA
AACCGCAAGCGTCAGGGTAGTGAACACAAGCTTTTTCATCCCAACCCCCA
ATGCACGCGCAGTATTGTCTCATTTCGTAACGGCAGCGCTGCCGGTGTAC
GGGAGGCCGGGATGCACCAGGACAACTGTTTTCAGAAAGGAAGGCCCGGG
AAGCGTTGTTAGCTGTGTCGACAGCAGTTATTACTTGGGGCCACATCTGA
TTTTAGTTTTTCCGCTATTTCAAACGTGAATGTCACGACGGGGGCGGGTG
GTTGAGTTCTTGCCTTTGGAAATTCACCGGCCAGGGGTCATGCCTTCGTC
CACCCAGCCTCCGGCGTCATACTTCATTTATCGCTTCGGCTTGACTCCTC
TCTTGCACATCCCTTCGATCTCCGACACGTTGAGTGCTCCGACCAACGCT
GTGCAACCTGCATCTCATTTGACCTCTAAATTCCAGCACCGTAGATCTAC
ATCATGGTGGGTTTCCGGCGTTTTTGTTTGCTGTTGGTGCCTTGTCGGCT
GCTGCTGCCCTTCGTTGTCGACATGCCCGCAAGGCTTGTTTTGTGTTGGG
GATCTATCACCTTATGGGTATCGCGCATGTCCTCAAGTTTCTACTATCCT
GTTTTATCGTCTCACTGGCGGTGTAATTATTTTTTGCTAGGTGAGGCTGA
GTGTCGACAAGAGGTACTTCGTCGAGCCTGAACAGGCGGCCAAGGCTACC
AACAAAGCTAAGCCCCTGGAGGAAACGAGGTGCACCCTGTGTGGGGCGAT
TGGGCACGACGACGAGGTGCGCGCGTTCGCGTTGCTATTGATTGTTTTGT
CGTTGCCGGCGTTGCTGTTGTTGCTGCCGCGACGGCGGTTTGTTGTTGTC
GTCGTCGTCGTCTCGTTTACGACCGTTCCGATCTCTGTTCAGTGACGCTA
CCAGCCATTGCTATTTAATCCGATTGGCACGAACGCCTTCCTTGGTCAAA
GGCAAAGTACCCGAAAAGGGTACACTTTGGGACGTATTTTTTGTACTTGA
TCCATGTAGATTGAGCCGATCCCAGGTCGAAGCACGCTGACGCGAGCATG
GCACAGGTGACCTAAAAGCACTATAATAGCGTGCAATCATGTAGGAACGT
TGGGACATGGTTTGTGTTTGAACATCAGTATCGTTTCCCGTGAAGCCTGT
TCCGCCCGCTCCTCCACCGCTCTGTTTTATGGTCGCTATGTTTGCATGTG
TAGGACATGGCGCGTGTCTGTGTTTCTTCCCTTTCTCTGGCGGGTGTCTG
TGTTCCTACGTAGTTTTGACGACTACTGTTTCCGCCCAAGAACAATACCG
CCCACACATACTTCTCCTGCCGCCCCCTACATACGCACGCGGCGAAAACA
TTTATCGCTCACGCTAATGCTGCTGCTGCTGCTGCTGCTGCTACCGCCGC
CGCTGCCCTCTCCTTAGAACTGCCCGTTCAACGCGTGCTCTCGCTGCTGG
GAGGAGGGGCACCTCGCGGACGCCTGTCCCTATGTTGATGTGATGGAGGA
GGGACCCGAACCCTACTGCTCGGTGTGCGGCAAGGCTGGTCACTCGATCG
ATGTGGGTACATAGCGTCTGGGTTGGCGGACGCAATTTGAAGTGCGATTA
TAGCGTTGCTGTTGTTGGGTGTGCCGGGGGTGTGATGTTGGTAGTGATGT
GGTTTTTGTTTGTCTCTGATCACCGCACCCTTGTTCTTCTAACCGCCACT
TTGCATTTACTATCTTATCCTTGACACACAAGGACAAAGAGACCAGACGG
TGTTGTTGTTGTTGTGGTTGTCTTCTGGTGGAAGACCGATGTGCTTTCAA
TGATCAGCCGGTCGCAAAGCTTGCAAAGAATCTCGCACCTACTCCGGATT
CCGCCCCCTAACCCACAAATCCTTTCCGTGGGATGCATCGACCCTGCCGG
CGGTAGGCTTGCGAGACGGCTTGCAAGGGCAAGTCGCAGCTCAAGTTCAG
CTGCATCACCTGCAGAGACGATGGCCACACTCAGTGCGGAAAGGAGACAA
TCTTGGTGTTCGGGAACGAGAGAGGCCACGCCATGACGTGCTGCAACTGC
GGCCTGGAACGCCACGACTGGCGTTCCTGCCCTCATCAGACGGAGGCTGA
GATCCTTCGGGAGTGCGGCTACAGGTTCAACAGGTGCGTATCGTTTGTTG
TTGTCCGGCGCTGCAGGGCCAGCGCACGACCGAGAAGCGCTCCCGAGAGA
GAGACTCACGCATGGTGCTGCCACGGAGTGAGGCCTTTCGTGCACTTGCA
CTGCGTATCTTCGGAAGTCCTTTCCTTTGCCACATCCTCTCGCAAACGAT
TTATCTATTGAAAAATACCACGGATGTACTGCGTTGGCATTGGCGTTGGC
ATGTGCGACGTTCGTGTGTCAACAAGGGCCTCGCCTTATCCTAAGAGATG
AGTGTTCATCCTGTTTTGGTCCAGATGATCGCCGGCGGTGCTAGTCGGCT
GCTTGCTACCAACGGCGAAGAAGTTGTCCTTACGGTGTTGACGTTTCTTT
GTCCCTCGCCAACATCTTGTTGTACCGAGCGCATTTTGGTGGGTGCTTGT
GGTCACACCAAACAACTGGTTTGTATATACCCATATACCCATGGTAGGTG
TCTCCGGGACCGCACAACTGGTGGCGAGGTACGCGCGATATGGCGTAGTT
TCAGTTGTGATTGGGTCCTCATTTTTTGGAGGCATACTGTTTGCACTGCA
AATGTACAGTATGCGTAAAATGAAATGCGGCGGTTCCTGCTGGTCATAGT
ACGGCATACGCATTGTGCTTGAGATTTTGTTGATGTACCGCCGTTATCGA
CCCGCTTTGTTTATCCACTCCAAAGCTCTGCGGGTGGGGGCAACCGACGG
AAGTCGACGGGAGGGGGGGGCAAGACCTACATGGTGTGCTACAATTGCGG
CAAGCAGGGGCACGGCAAATCGGAATGTCCGGTACCGAGGCAAACCCAGA
CCCCCGGTCGCTTCGGAACGTGAGTGTAGTGTTTGTTTACTTGTTGGGAT
GGGTGTTGGTGGCGGTGGTGCGGTTGTACCGGAGCTGGTGGTGCTCTGGC
GGTGGTTGTTATAGTTGGTAGTGGTGCTGGTGCTCGTGTGGATGGTTTGC
GAGTGCTCGTGGTGCTAGTGTTGGTTTGTGACCGTGGGGGAGTGCAAGGC
TGGGTGAGTGATGGTGGCTTGGTTCTTTGCTGTCTTGTCTGGTCGAATCT
GTGTCTCGTGCCTGTAGGGCTAAACTCAGGAAACACCCCATTTATAGGGT
CGACCTTCCCTCCCGCTCCGAGTTTCACTCCCGCTCCCACCCCCACCCAC
TTACAGTACTTGTACTTATGTCCACTTACGGACGGCGGAAATCGAGCGGA
AATCGAGCGGAAATGGACCTCCACGTCACCGCACGGCAGAACATCGAATA
GCCTCGACAACAGTTTCGCTCCCACCCCCACATACTGTTAGACTCTACTA
TTTGTGGTATCGGCGCCAGTACTTTGTTATCACGCTCGCCGGCCGGGTTC
TCGCCACTGGATCGTTGATGCTTGCTGGCCTTGGACCCCACCACAACAGC
TATCCTTGGTCGATATATCCACACCAGGTGCTACCTCCGGAACCTTTCCC
TGCCGACGTCAGCTGATTTCTCTTGGACCCCACCACAACAGCTATCCTTG
GTCGATATATCCACACCAGGTGCTACCTCCGGAACCTTTCCCTGCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGATAGCTGTTGTGGTGGGGTCCAAGAGAAATCAGCTGACGTC
GGCAGGGAAAGGTTCCGGAGGTAGCACCTGGTGTGGATATATCGACCAAG
GATAGCTGTTGTGGTGGGGCCTAACAAGGCCAGCGAGCGTGATGACGTAG
TACACGCGCCGAGATACCACCCACAATGAACTATCGTTCATCTTACTTCC
CTGACTAGCGTCAGTAACAACCAAAAACCACAACTGGAATCACGAATCCC
CCTTTCTCCGTGGCTCGTTTTCAATTTGTCCGTCTTGGGGCTGCATGGCA
TGCGTAGTAGCAACCACTACAACCGCAATGACCAACCCCGTGTCCCTGCC
GCGGACTGGAAACAAGAGTGGTCCGCAAGCAACAATAACACCCTCAGCTT
CAACAGCCCGAGCCAGAACCACGGGAGCCGCAAGTTTAGGAACGATCCTA
TGGGGTCCGGCCAGCAGCATCAGCATCGGGCGCAGCAGCCAACGCACCTA
CCGAGCGCGTATCTCAACGACCTTGCGCAGCCGCCCAGCCCCTTGCAACC
CACGAGGCGGGACGGTGGTGCTGCCGCCTTCAGCGGTCCCCCGTCGCCCC
CTTATCACCACCGCAACCACAACAGCCATCACAATGGGGGAGGTTACCAT
CAACATCAGCAAGAGCGCGGCGGCACACACAACCGGTACGAGCACCAGAT
GGCTTCTCCGACGGACTCGCGATCATCATTCCCCAGGTGGGGTGACAATG
GCGCCGTTAGCAATGGCGGCTCCAGCAGCGGCACTCTTCACCGGGCGTAC
CACCCTGGAGGCAACTTTGGCAGCGACAGCAGCGGCGGCGGCGGCGGGAG
GAGGGTGGAGGATAGGCACAGGAGCAGCGGCCACCGTGGGGAGAGATACA
GCAGCAGCAGGGGCGGAGGTGACAGGCACAGCGGGGGTGGGTCATCACGG
GGTCAGAAAGGAGGTTACCACTCGTACAGCAGAGACCAGCACCAGCCGGC
TCCAACCCCGTCACCTTCTTACAGCCATCACAGTAGTGGTAGTCATCAGT
GTTCTCGCTACAGCAGCGGACAGCCATACTCCTCCGGCGGGCAGTCATAC
TCCGCCGGCCGACGTGGGGGCGGGACAAGGGACGCGCACGCCAGTCCTAG
AAGCTACGGTTACTAACTATCGCAATGAACTTTGTGGCAGCCAGGATGGT
GGTGGTTGTGGATACTTTGGAGGACCCTGATGATAGGATTCACGGCCATT
CAAGCACGTGAGACAGGCTCGCGCCATTTCCACCTGCTACCTGTTGATTG
TCTAGAGGGAGCGCTGTATACCCACGGTCACGACCGTTTATGGGGTCCAA
CACTCGCACCTGAAGGGCTTGATGCACGATGCCGCCTCAACAGTGTCCTC
CCTCTGCGGTAGTTGCAGTAGATGGAATAGCCCGGCTGCCCCCTCCCGCG
AAGAGACCCTCCATACCCAACACGAAGAGAACCGCGAGGGAACATGATGT
GCCCTAGCGATCCTTTACGTGGTATTGTAGCCCGCAGGGTTTTGATAACA
CCACGGTCTTTTGTGTTTATTGGGTTGTGTTGTGTTCTGTTTTTTACGCT
TTTCTAAATATTTGTTCGGTTTAGGTGGTCCACTGGCAAACCTTGTGACA
AGGGGTGTGTGGTCTCAGTCCAAATTGACGAACTACGCTTGAGCGAACGC
TCAACGTTCCTTGTCGACGGGGAGAGGGAAGGAGGTGTGCATGCAGTGCA
AACCATGCAAGCCACGCGAGCCACAGGATTTCCGAGAAATTCGTTCTCCC
TACCCTCGCGGGAAAATCGTTGCCAAGGGCCTATGGTGACTGTGGACATG
CGAAATTGTCCCAGAATTTCTTCTGGCAGGGCACGGTTGATCCCTCTGCC
GGTCCGACAAATGTGGGAACTTAAACTTACGCCCTGCCATAAGAAAGAGG
GTAATTTCGTTACTTGTGGAAAATGATGTGCAAACTGCCGAGAGGTCTAC
TGTAGCTATCCGCGTTAAACCCGGGACGGCGCCGTGCTGAGTGTACATGA
CGGTACCGTCCTCTCTTGTTGTAATTGTTTCGAGTGCGGCAGGGTGTTGT
TTGCAGTTCAGACGCAGATATCACGTGCACACGTGAGACACGTGGTAGAA
TAGTGCATGTTGTCGCGGAAGCGTCGGAATTTCTTTGAATAGTGTCCCAT
CTCGCACAAGAGGTTCGGCTTCCGCCCTCGAGACGTTTGGCGTCCTCAAG
TCTCGCTTTGTTTCTTACCGGACCAAAGGACAAGGACTCACAAGCAAGCC
TCTTTGGCAAATGGCGAACTTTTTGTTGGTGCTTCATTTGCGAAGAGGCC
GCGATCAGGGACGAACGGGCAAATGACGCACCGGGTGTCCAAACCTACTG
CGCAAGGATGTATAACTAAGCATGCATGCGTTTTGTAGACAAGACGATGT
ACGTGTGTTGTCTAACAATAAGCCCGTATTGATTGAGGGGAGGCAGGTGC
CGAAAAAAACACCCAACCACGCCGTTGGAAACGACCATGTGCACGTATTC
CCAGAAAACAAATTCGATTTTGCGTGCTTCGGAGTATTAGCAGGGGAGCC
GTCACCGTAGATTCTTGCCATGTGAGGATCGGTACAAACACCGCGTGATC
ACCATGAAAGGACGCATTCTTTCTGTTCAATATTTTTTTCGAAGTAGCCT
CTAGCATATTAAATGCACGTACAGCAGTGCAAGATGATTTTGTTGTTGGC
GGTCATGTGTGTTTTCATGCTCAGTGACGCTCAATGCCGACGCCCGGTGT
GCCAGTGGCCCTACTCGCTGCGCCCTAAAGAGATGCACCGCGTATAAAGT
GGTACCAGGACTTTCACCCTACACAGGGCTTAGTTAAGGGTGTATGTTGA
AGGGTACATGGTGATGCCTGTCAGGGACGGACATCCTCAGGTATGGTCAG
CTTCTTGCGCCCAAATGGCTGGGTAGCGCCGGTTGGAACGAAACACACCC
GTCGTGTTGTGTTTAATCTATGTATGCTGGATCACCAGCCCAAAAGGTGT
CTGGAACTAACGGGCCGGGCGGGGGTTGTAGCCTCGGCCTCAACTCAAGC
ATTTTTTTTCGCGAGGCGGAGAGCTAGGGCCGTGGCAAGGGCAAGAAGAA
TGATTGTTGGTGTCGATGATGCTAATCTGTAACCTGGAAATGTTCTTCCA
AGATTTTCTGCAATTAGGCTCATACTACTGTATGGCCCACCGCCGCGTCT
GACTTCACAATTACCGTGGGCGTATTAATGCCGAACAACGTTAATCATCA
AAGGTGTGCGGGCCCCCTAAACGGACGCAGCAAACAAGCCCTTCGTTTCG
CACGGGAAGCCTATTTCATGCAGGAAAAGGGTGGTATTCATTGCACGCAG
ATGTTCGCAGTTCGTGGCGGAGGACCTGCAAACAGATTATCAGTGACTAT
GTTTGTTTTGTTGTTTCTCTCACATTAGCTCTATAGTCCACAAAAATGGG
GAGCCCGTGGTCGCAAAACCCGGCACATACGACGCCGCGGGGAAACAAAA
CAAGAAAAGGGTACGAACCACTCGGAAACAGAAAACGAAATGATAGAAAA
AGAACAGCTACCGCACCGACCGGTCGAGAAAAGGAGCCCTAGGAAACCGA
TCAAAATAAAACAAAACAAAAATAACGGCAAAAATAAAAAGGGAAACAGG
GAAAAAGGAGGACGCTTCCCACACCCGCCTAAAAAAATCAAAGGGTACCG
TACCAGCATCAGGCACTACGCACCAGGGCATGGGAGTAATGGAGGCAACA
GAACAAAACAAAGAGGCGGCAGATGGGCAGACAGCCATGTGTGACTATGC
ACCTCGCATGCACCTCACAGAAATATACCGCATTATCCACCACAGCAGTA
TATAACCACGATGAACCACCGCTAGTTTGTATGCACCAGAAACGCATATC
CATCCCTGGTAACTGGTACCCCATAAAACACTATCACCCCAAATCTTTCA
GTCTTGGCTGTAACGGAGGTGTCGCGAACTATGTACAATGGACAGGTGTT
GCCAACACTTGTGAAGTGGAAGGAAAGGGCGATTGTACCAGTTCCGAGGC
CCAGATATTTCGATTTATTTTTATTTTTATTTGTTCGACATCGGATACGC
ATGAAGAAAATACGCAGAATTGACCTGATACAGGGAAACACAAGCGAATG
CGAAAAAACTCGAAAGGTGAGACTCGCCCTTTAGCGATAAATCTAACCAG
TCTCTCACAGCGAGTACACACGTTTTGCGATCATCCATGCAAATCATTTG
CAATCAATAGGTTTTCAAAAATGCAATTGCCCAGGTACGAGCCCAGGTAC
AAACACGCACCAATCACTCCTCTCTCCCCGTCTGCCGTAACACAACAGCA
CTGATCATCTAAGTCATGATGATCTGGCTAGGCTATCAAATATGACCCAT
TTTGATGCGTTGAAGAGGGCCCGTCTCCAAGACGGCTCTCGCCAAATATC
GTCTCCGAAAACAAGGTACATTGCATCACATCACCATTCCGATATGTTCA
TCCTCAGAAAAAACAACACAGGGCGGCGGCACAAGGGCCAGAGAGACATG
GTGAACGCCACTAAGCCCGAAAACAATGGGTACTGAAGCAGGCAAACAGA
CGCCAACTCGTTCGTTTGTTCGGCAATGCTTGCCCCAAATCACCCTCACG
TAACAACAGAACGACGGAGAACACACCAAGTCCCGCCCCCACAACAACTC
TTCCATGGCATTGCACATGAGGGGTGTCGTACCACGGTACAAAGGCCGTG
ATCGTCTCAAGTCATGGCCCATCCGACAGTGGCACCCCCGCCTTCCGACT
AGCGCTAACATGAGTGGGGTGGGGAAATCAAATGACTGCGATCGATTTCT
CGAATGCCGAAGTCGTGATTGATTACGAACCCTACCCTTCGGTGCCGATC
CCTACCTAGTACGGTCGTGGAAACATCAGGCGGCAACGGTCCAAAGGGAG
AGAGACATGATACATTACTTCACCTATGGTGCCTTCTCTCATCAATAGCC
GCGCGAGAACGGGGAAGGGCGGGGAGGGGCAGGGCAGAGGGGCATGCGGC
AATGCCCAGGATCGCATTGCGGACGGCCAGTGGTCGTCAACCCGTGCGCG
GTGGCGCGAATGGCGAAGTTGTTGTCGCCGGTGACGAGGGTCACC

Coding sequence (CDS) from alignment at chr_00:6397508..6410452+

>Ec-00_004640.1 ID=Ec-00_004640.1|Name=Ec-00_004640.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3102bp|location=Sequence derived from alignment at chr_00:6397508..6410452+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCTCTTAGGGGCTACGCGGAATCAACCACCCAGAACGTGTACCATAC
CCCGAGCTCTGAGCTGAGATGGTCACCTCTGCCTCACGCACAAGCCACCA
GATTGGAGAGCAGAGAGGGGACGCCACGAGGAGCGCTGCTGCCGCCAGTT
CTATCAACCACACAGGCCATGAGCCGCTTAAGCTACAGTGAGACCCGGGA
TGGCATAGTGCTCGGCGTGTCTGAGGAAGGGGTAGAGACGAAAGGGCCGT
CAAACAGCGGTGGCAAACGAAAGCGAGCGCGGGACGACGACATCGATGGC
GTGGCGGAAGCAGAAGCGAACGGCGGGAGTGGTGGGGCGGCGAGCCCGGG
CGCAGACTCACTCAGCTCTTACTCACTCATGGGTGTCGCCGACGGAAACG
ACGGCAAAGATGCTGCCGGAGGGGTAAGCAAGGTAGAGGTGGAAGCAGCG
GCTGCCGACGGGGCACCATCGTCATCGGCTGATGGGAACGCCGGTTCTGG
TGCTGATGCACCTGCTGCTGACGACGACGATGATGAGGTGGTAGAAATAC
CGCCGCCGTCAGCGGCACCGGCAGTTATGGAGCTGTCGGAGGAAGCAGAC
TGCGACTCAGGAGGTTTCAACTCTGGTCCACCAGGTACAGCTGCGGCCCC
TATCTCGATAGAATCTGGTGAGGCTCCGCAGAAGAAGAGCAAGGGTCGCA
TATCGAAAAAAAAGCAGAAGGCTGTCGCGAAAGAGTTGGAGGCTCAGCAG
GAAGACGGCGACGATGGTAGTGGGAGCGTAGGAAGCGGAGAGCAACGCCC
CAGCAAAAAGGCCAGGAAATCGGCCGGTGCAAAGGCTAAAGACAGCGACG
GTGGCAGCGAAGGCGGCAGCGACGACGATACCAGCGAGGGGGTTGACGCC
GATGAGAGTAAGGGTGACGACGGTGGGGACAGCGGTGAAGGGGACGGGTT
GGAAGGGCCAGTTTTGTTCGCGGTGGGCCAGCCGATGTCCAAGAAGATGA
GAAAGATGGCGAAGGGTCGCCTGTCGAAGTGGGCCTTGAAGTTCACGGGA
ACGAGGACCTACGCGCCCCCGGCCGTGCCGGTCATCGAGCCAATCAACGA
CGACTATCTCGCCAGCTTCGGGCGGTCCTACGCCGAAGCAAAGAGCCTCA
CTGCCCAGGACAAGAAGGAGAACACAGCTACGCAAGACGACGACGGCGAC
GACGGCGACGATGGCGATAGCCAAGCCGGCGACGAAAATGGTGGCGGCGG
CGACAAGGAAGGCCCTTCCGACGACGAGAAGAACAGCACTGCCGAAAAGG
ATGCTGCGGGCCGTGAAGCGGCCAAGACTGAAGGTTCGGGCTCGCCGACG
AAGAAGAACAGTCTCCGCGGCGGACGGAAGAAGCACGGCGTGTTCGTTGT
GAATCTGCTGTACACCTTGTGCGACGAGGAGAAGCTGGAAAGTCTCTTCA
GCGCGTTCGGGCGAGTTACTGCGGTCGTGCTGACCAGACCCCCCGAAGGA
CAAAAGGTGTCCGGCATCGCTAGCGTGTACTTCGACACGGCGGAGGAGGC
GCAGAAGGCACTAGCCGCGGACGGCATGGACATTCGTGGACGCTGTGTCG
GCATACGAGAGGTGAGGCTGAGTGTCGACAAGAGGTACTTCGTCGAGCCT
GAACAGGCGGCCAAGGCTACCAACAAAGCTAAGCCCCTGGAGGAAACGAG
GTGCACCCTGTGTGGGGCGATTGGGCACGACGACGAGAACTGCCCGTTCA
ACGCGTGCTCTCGCTGCTGGGAGGAGGGGCACCTCGCGGACGCCTGTCCC
TATGTTGATGTGATGGAGGAGGGACCCGAACCCTACTGCTCGGTGTGCGG
CAAGGCTGGTCACTCGATCGATGCTTGCGAGACGGCTTGCAAGGGCAAGT
CGCAGCTCAAGTTCAGCTGCATCACCTGCAGAGACGATGGCCACACTCAG
TGCGGAAAGGAGACAATCTTGGTGTTCGGGAACGAGAGAGGCCACGCCAT
GACGTGCTGCAACTGCGGCCTGGAACGCCACGACTGGCGTTCCTGCCCTC
ATCAGACGGAGGCTGAGATCCTTCGGGAGTGCGGCTACAGGTTCAACAGC
TCTGCGGGTGGGGGCAACCGACGGAAGTCGACGGGAGGGGGGGGCAAGAC
CTACATGGTGTGCTACAATTGCGGCAAGCAGGGGCACGGCAAATCGGAAT
GTCCGGTACCGAGGCAAACCCAGACCCCCGGTCGCTTCGGAACTAGCAAC
CACTACAACCGCAATGACCAACCCCGTGTCCCTGCCGCGGACTGGAAACA
AGAGTGGTCCGCAAGCAACAATAACACCCTCAGCTTCAACAGCCCGAGCC
AGAACCACGGGAGCCGCAAGTTTAGGAACGATCCTATGGGGTCCGGCCAG
CAGCATCAGCATCGGGCGCAGCAGCCAACGCACCTACCGAGCGCGTATCT
CAACGACCTTGCGCAGCCGCCCAGCCCCTTGCAACCCACGAGGCGGGACG
GTGGTGCTGCCGCCTTCAGCGGTCCCCCGTCGCCCCCTTATCACCACCGC
AACCACAACAGCCATCACAATGGGGGAGGTTACCATCAACATCAGCAAGA
GCGCGGCGGCACACACAACCGGTACGAGCACCAGATGGCTTCTCCGACGG
ACTCGCGATCATCATTCCCCAGGTGGGGTGACAATGGCGCCGTTAGCAAT
GGCGGCTCCAGCAGCGGCACTCTTCACCGGGCGTACCACCCTGGAGGCAA
CTTTGGCAGCGACAGCAGCGGCGGCGGCGGCGGGAGGAGGGTGGAGGATA
GGCACAGGAGCAGCGGCCACCGTGGGGAGAGATACAGCAGCAGCAGGGGC
GGAGGTGACAGGCACAGCGGGGGTGGGTCATCACGGGGTCAGAAAGGAGG
TTACCACTCGTACAGCAGAGACCAGCACCAGCCGGCTCCAACCCCGTCAC
CTTCTTACAGCCATCACAGTAGTGGTAGTCATCAGTGTTCTCGCTACAGC
AGCGGACAGCCATACTCCTCCGGCGGGCAGTCATACTCCGCCGGCCGACG
TGGGGGCGGGACAAGGGACGCGCACGCCAGTCCTAGAAGCTACGGTTACT
AA

Synonyms

The feature 'Ec-00_004640.1' has the following synonyms


Synonym
Esi0361_0021
Esi_0361_0021