Ec-00_004510.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_004510.1
Unique NameEc-00_004510.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length614
Homology
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: D7FZB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB1_ECTSI)

HSP 1 Score: 1264 bits (3272), Expect = 0.000e+0
Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQHTSVDEKLPALQIGRGQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWGDERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFALKLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIYAGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFTPGNPLNEAGDVTWVHDPRLDHSGRALKQESADNVCKTHMGLHKIYPDTMTEVWNKSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETFTGNTKIHCGAGGC 2495
            MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQHTSVDEKLPALQIGRGQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWGDERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFALKLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIYAGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFTPGNPLNEAGDVTWVHDPRLDHSGRALKQESADNVCKTHMGLHKIYPDTMTEVWNKSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETFTGNTKIHCGAGGC
Sbjct:    1 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQHTSVDEKLPALQIGRGQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWGDERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFALKLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIYAGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFTPGNPLNEAGDVTWVHDPRLDHSGRALKQESADNVCKTHMGLHKIYPDTMTEVWNKSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETFTGNTKIHCGAGGC 613
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: D8LCM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM9_ECTSI)

HSP 1 Score: 659 bits (1700), Expect = 4.650e-219
Identity = 356/649 (54.85%), Postives = 435/649 (67.03%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCS---SEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWV-EQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLV---SNASALP----LEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQHTSVDEKLPALQIGR-----------------GQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWGDERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFALKLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIYAGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFTPGNPLNEAGDVTWVHDPRLDHSGRAL---KQESADNVCKTHMGLHKIYPDTMTEVWN----KSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETFTGNTK-IHCGAGGC 2495
            +YAIHHGA+VIYDVDD + L+ P++GVP ++ SS+       F S  S  VHNPYPCFGA GVVWPRGFP  K++   SS C      G    Q +GVVQALA+++PDVDA+YRMT  P G P SFV E+S      +LR VPA  F+PYNA+ATLHF VAFWG+LLP TV  RVSD WRSYFTQ LLP+ GAV  F+P WV  ++  P +Y  DF+AE PLY++SGALV+FLLQYR  V   ++A A P      IEAL+V MYE+GIVE +DVAL QAWL+DLRD GY   E              +Q  ++DE+ PA   GR                 G   P  +P VLLV+A++SAR ERR+AIR+ WSAWGD+RVELRFFTEAPA + PD+++ +AALEEE A+H D+VLMDID GMNFALKLVWAM+WMS ++ F+FFLRLDDDYFLCLGRLL EL+ T    ++P  IYAGH  C   G  RIDEAY+LLS++LV RVLS  DL+C GH GVTA WWFT GNPLN  GDV WVHDPRLDH G  L    +E   +VC THMG+H  YPD++ E+W     KS A  D     SL  Y+ D +C  V AG+ +  F+ DH QPC+ F  +   + CG  GC
Sbjct:  167 LYAIHHGAKVIYDVDDAHVLMRPEEGVPFAETSSAEH--ELSFFSRPSTCVHNPYPCFGASGVVWPRGFPPAKIRDKSSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPRGSPLSFV-EESPPLPGSSLRLVPAWTFSPYNAKATLHFPVAFWGMLLPVTVHERVSDIWRSYFTQTLLPSAGAVVGFAPPWVTRELEGPNSYRDDFQAELPLYEQSGALVDFLLQYRHAVEDEASAQASPESQASRIEALSVTMYEHGIVEGDDVALTQAWLKDLRDVGYDGLEQ-----------VERQKIAIDEQAPAPAKGRLAGRREADKSSVLSERSGTTLP--VPHVLLVIAVVSARSERRDAIRAGWSAWGDDRVELRFFTEAPAGSGPDSQATSAALEEESAVHGDLVLMDIDPGMNFALKLVWAMRWMSKQFSFDFFLRLDDDYFLCLGRLLDELDATLAGAEQPLNIYAGHRYCEVWGRARIDEAYLLLSSALVGRVLSAPDLVCSGHAGVTAAWWFTKGNPLNRMGDVEWVHDPRLDHEGDLLLDSPKEQYPDVCTTHMGVHHAYPDSIAELWEGAKGKSGAGTD-----SLFRYVDDGACGMVRAGIDRPYFDLDHPQPCDAFKSDEDAMFCGHEGC 794
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: A0A6H5JQ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ39_9PHAE)

HSP 1 Score: 609 bits (1571), Expect = 3.660e-200
Identity = 334/638 (52.35%), Postives = 405/638 (63.48%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSST-----CSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDL--VSNASALPLE-IEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQHTSVDEKLPALQIGRGQPSPGELP------RVLLVVAILSARPERRNAIRSTWSAWGDERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFALKLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIYAGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFTPGNPLNEAGDVTWVHDPRLDHSGRALK--QESADNVCKTHMGLHKIYPDTMTEVWNKSQ-----AYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFN--RDHAQPCETFTGNTKIH--CGAGGC 2495
            MYAI HGA+VIYDVDD NAL+ P++GVPH+ VSS     + RF    S+ VHNPY CFGAPGV WPRG+PL  +Q  D S      C  +G   S+ IGVVQALANHDPDVDAIYR+T+PPGGLPFSF        E+  LR VPA   TPYNAQATLHF VAFWG+LLP TV GRVSD WRSYFTQALLP   AV  F+P WVEQ+ NP +YL DF+AE PLY+R+  LVEFLL Y D    SN+  L    +E LAV MYEYGIV++EDV L QAWL+DLRD+GY   +           V  QQ   +  ++P  Q   G PS   +        V+LV+A++SARP+RR+A+R +W  W DERVE+RFF E P   + D  S+     +E A H D+V+MDID GMNF LKLVWA++WMS  + F+FFLRLDDDYFLCL RLL ELE      + P +IY G + C     TRIDEAYMLLS  LV RV+ T DL C    G TA WWF  G+PLN+ GDV WV+DPRLDH G+ +    E   +VC  HMG+H  YP+ M   W  ++     A  +   G  +L Y++D +CK     V+   F   R   Q C+TF  N KI   CG  GC
Sbjct:  157 MYAIQHGAKVIYDVDDDNALIHPEEGVPHAGVSSIEDNVLSRFSGHPSSSVHNPYGCFGAPGVSWPRGYPLPAIQ--DDSPHHAAYCDVDGISGSR-IGVVQALANHDPDVDAIYRLTHPPGGLPFSFNPGAPGTPES-TLRGVPADKMTPYNAQATLHFPVAFWGMLLPVTVHGRVSDIWRSYFTQALLPLANAVPVFAPAWVEQIRNPHDYLGDFQAELPLYERASTLVEFLLGYADEKGASNSGGLTWSLVEDLAVTMYEYGIVDEEDVVLTQAWLQDLRDSGYDLED-----------VTGQQGHPL--QVPVHQ--GGSPSSSAIEPLDSRAHVMLVIAVVSARPDRRHAVRQSWLTWEDERVEVRFFVEKPEPGSADDTSLA----QESAAHGDIVMMDIDPGMNFGLKLVWALRWMSDEFTFDFFLRLDDDYFLCLRRLLDELEIARAVAEAPLRIYGGLVMCNVYHMTRIDEAYMLLSEDLVRRVVDTPDLQCASDAGTTASWWFAEGHPLNQLGDVKWVNDPRLDHFGKIIDGPPELFADVCVAHMGVHHTYPEQMGIFWEAAKDKPGPAPAETGDGTFILSYVSDDTCKDT-GPVTDELFRSGRFEGQSCDTFKSNNKITIWCGKQGC 770
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 6.640e-102
Identity = 173/293 (59.04%), Postives = 200/293 (68.26%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQV----------IGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNAS----ALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGY 1493
            +YA+HHGA VIYDVDD NAL+ P+ GVPH+ +S         F     A VHNPY CFG PG VWPRGFPL+ +   DS+ C  E A+DS            +GVVQALANHDPDVDA+YR+TYPPGGLPF F   D       +L+ VP +AFTPYNAQATLHF  AFWG+LLP TV GRVSD WRSYFTQ LL + GAV AF+P WVEQ+ NP NYLADF+AE PLY++SGALV FL  +R     AS     LP  I+AL V MYEYG++E  DV L QAWLEDL   GY
Sbjct:  104 LYAVHHGATVIYDVDDDNALIHPEAGVPHA-LSPVTPASTTSFAVGPEAFVHNPYGCFGGPGNVWPRGFPLDSINDADSNRCD-EVAVDSAGESAAPEEGWRLGVVQALANHDPDVDAVYRLTYPPGGLPFDFEVPDPVPEGMSSLKIVPPAAFTPYNAQATLHFPPAFWGMLLPVTVHGRVSDIWRSYFTQTLLTSTGAVTAFAPAWVEQIRNPHNYLADFQAELPLYEQSGALVAFLDGHRRQSVAASEAGVGLPERIDALMVEMYEYGVLEQADVQLSQAWLEDLYSVGY 394
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: UPI0014553AFF (probable glycosyltransferase STELLO2 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553AFF)

HSP 1 Score: 227 bits (579), Expect = 1.240e-61
Identity = 131/283 (46.29%), Postives = 165/283 (58.30%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPE 1505
            MYAI HGA+VIYD DD N L+     +P  +V        F  H    + V NPYP FG    +WPRGFPLN++    + + +  GA   + IGVVQ LA HDPDVDAIYRMTY    LP+ F  E            +P    +PYNAQ T H Q AFWG+LLP TV  RVSD WRSYFTQ LL  +G   +F    V Q  N  NYLADF +E  LY ++  LV+FLL +   V+ AS L   +  + + +YEYG +E  DVAL +AW++DL+  GY FP+
Sbjct:  163 MYAIEHGAKVIYDTDDDNGLL--ADLMPDFEVH-------FAQHVKLDSYVWNPYPEFGPSTHIWPRGFPLNRITDDTTKSLTLVGAAKGEDIGVVQYLAQHDPDVDAIYRMTY---DLPYDFNLEPKRFV-------LPPRVLSPYNAQTTHHSQDAFWGMLLPITVHSRVSDIWRSYFTQRLLWDIGKRLSFHSPAVVQNRNAHNYLADFDSEMDLYYKADNLVKFLLGWTPSVTLAS-LEQRLFEMQIDLYEYGFIEAGDVALTEAWIQDLQSLGYVFPK 425
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: A0A7S1INI2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1INI2_9EUGL)

HSP 1 Score: 219 bits (558), Expect = 6.050e-59
Identity = 132/285 (46.32%), Postives = 162/285 (56.84%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSS---EGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFP 1502
            MYA+ HGAEVIYD DD N L+     +     S  G+    R H D    V NPYP FG  G  WPRG+PL+  Q+++ +T  S   E  +      V Q+LANHDPD DAIYR+T P   LP +F              A+P   F PYNAQATLH + AFWG+LLP TV GRVSD WRSY TQ +L  +G    F   WV Q  N  NYLADF +E+ LY+++ ALV++L   +D  S+   L   +  L V +YE  I E EDV LM  WL DL  AGY FP
Sbjct:  150 MYAVAHGAEVIYDCDDDNELIIDGNELESIPTSMQGEVLSPRGHPD----VFNPYPMFGNVGG-WPRGYPLD--QILNKTTYESTEMENVVAKNNFYVHQSLANHDPDYDAIYRLTRP---LPVTFTPGPPV--------ALPPGTFCPYNAQATLHLKPAFWGMLLPITVHGRVSDIWRSYITQRILWDIGGRIVFRSPWVVQYRNAHNYLADFDSEYDLYKKATALVQYL---KDWNSDEKILKRRLLQLCVDLYEREIFEQEDVLLMNDWLHDLGSAGYEFP 413
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: A0A8B7XWL1_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWL1_ACAPL)

HSP 1 Score: 218 bits (556), Expect = 1.880e-58
Identity = 125/282 (44.33%), Postives = 161/282 (57.09%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAIVHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFP 1502
            +YAI HGA++IYD DD NA + P+  VP  D     +      +      V NPYP FG    VWPRGFPL++++   +   +  G    Q +GVVQ LA HDPDVDAIYR+T     LPF F         T     VP   F+PYNAQATLH   AFWG+LLP TV  RV+D WRSYFTQ LL  V    AF   +V Q  N  NY+ADF  E  LY ++ +L++FL  ++   S+ S L   +  L + +YEY  +  EDVA+ +AW+EDL+   Y FP
Sbjct:  172 LYAIEHGAKLIYDTDDDNAPLFPE--VPAFDNVGYAR------YVTAGGAVWNPYPTFGQNTKVWPRGFPLSRIKDQSTKIAAESGKALPQQVGVVQFLAQHDPDVDAIYRLT---SELPFDF-------NPTPRRLVVPKRMFSPYNAQATLHAHDAFWGMLLPVTVHSRVTDIWRSYFTQRLLWDVNLHLAFHSPFVRQERNQHNYMADFDGEMDLYYKTESLIKFLQDWKPRDSSPS-LQQRLLDLTIELYEYDFIGAEDVAMTKAWIEDLQCLDYIFP 434
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: A0A4D9D524_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D524_9STRA)

HSP 1 Score: 216 bits (549), Expect = 4.120e-58
Identity = 128/300 (42.67%), Postives = 176/300 (58.67%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGK----PDVFRFHSDESAIVHNPYPCFGA-------PGVVWPRGFPLNKVQLVDSSTCS-----SEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDE-DVALMQAWLEDLRDAGYAFPE 1505
            +YA+HHGAEVIYD DD N L    +G P     + G+     DV R      + V+NPYP FG+       P  VWPRGFP++ +   D+ST +      E  +   VI +VQ+LA+HDPDVDA+YR+T     LP  F +  S++ E      +P    TP+NAQAT+  +  FWG+LLP TV GRVSD WRSY T  ++   G   AF+  +V Q  N  +Y+ADF AE  LY+R+GALV +LL++R +  +   +   IE +A+AMYE   + D  DV L  AW++DL+D G A P+
Sbjct:   57 LYAMHHGAEVIYDTDDDNILKVDSRGKPFIPDCNLGELALSKDVVR---SGQSHVYNPYPNFGSVRVKDGSPAFVWPRGFPVDLI--TDASTWNVSRGVEEETLKGGVITIVQSLADHDPDVDALYRLT---SHLPLRFRSGGSARLEV-----IPPGVMTPFNAQATVFGKAGFWGMLLPITVHGRVSDIWRSYVTSRIMWEAGQRLAFASPFVTQCRNSHSYVADFDAESDLYERAGALVSWLLEWRPVSHSLEGI---IEEMAIAMYEMDFLHDPLDVDLAIAWIQDLQDIGVAMPK 340
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: K8YW40_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YW40_NANGC)

HSP 1 Score: 222 bits (566), Expect = 1.940e-57
Identity = 134/299 (44.82%), Postives = 176/299 (58.86%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGK----PDVFRFHSDESAIVHNPYPCF-------GAPGVVWPRGFPLNKVQLVDSSTCS-----SEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDE-DVALMQAWLEDLRDAGYAFP 1502
            +YA+HHGAE+IYD DD N L    +G P     S G+     DV R      + V+NPYP F       G+P  VWPRGFP++ +   D+ST +      EG  +  VI +VQ+LA+HDPDVDA+YR+T     LP SF +   ++ E      +P    TP+NAQAT+  + AFWG+LLP TV GRVSD WRSY T  ++   G   AF+  +V Q  NP +YLADF AE  LY+R+GALV +LL++R +      +   IE +AVAMYE   + D  DV L  AW+EDLR  G A P
Sbjct:   70 LYAMHHGAEMIYDTDDDNILKVDSEGNPFIPDFSLGELATSKDVVR---PGQSHVYNPYPSFDSVNVKDGSPAFVWPRGFPVDLI--TDASTWNVSRGVEEGTHEGGVITIVQSLADHDPDVDALYRLT---SHLPLSFRSGGRARFEV-----IPPGVMTPFNAQATVFGKAAFWGMLLPITVHGRVSDIWRSYITGRIMWEAGQRVAFASPFVTQCRNPHSYLADFDAESDLYERAGALVSWLLKWRPVSPYLEGM---IEEMAVAMYEMDFLHDPLDVDLAIAWIEDLRGIGVAMP 352
[Close]
BLAST of Ec-00_004510.1 vs. uniprot
Match: A0A0G4IGI5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IGI5_PLABS)

HSP 1 Score: 213 bits (543), Expect = 2.520e-56
Identity = 127/286 (44.41%), Postives = 165/286 (57.69%), Query Frame = 3 
Query:  657 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFH--SDESAIVHNPYPCFGAP-GVVWPRGFPLNKVQLVDSSTCSSEGA-MDSQVIGVVQALANHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAFP 1502
            +YAI HGA+ I+D DD N L D      H+D+   G+ + +      D     +NPY   GAP    WPRG PL  ++   S   S + A +  + + ++Q+LA+HDPD+DAIYR+T P   LPF+F     +         +P     P NAQA L  + AFW LLLP TV GRVSD WR Y  Q LL  +G    FSP  V+Q  NP +YLADF +E PLY R+GALVEFL Q+    S A+ LP  +E L +A+YE G VE +DV L+Q WL+ L D GY FP
Sbjct:  200 LYAIAHGAQAIWDFDDDNILKD------HADIKVPGEDEDYSVDLPKDHDFPTYNPYVKMGAPHSPSWPRGIPLTHIKDSGSWKSSLQRARVKGRDVALIQSLADHDPDMDAIYRLTMP---LPFNFQPPSDAAPIV-----LPPKTLAPLNAQACLFRRAAFWMLLLPVTVHGRVSDIWRGYAGQRLLWDLGLHVIFSPPIVDQFRNPHSYLADFDSEIPLYTRAGALVEFLHQWS---SAATTLPGRVEQLWIALYERGYVEMKDVVLVQHWLQALTDVGYEFP 468
The following BLAST results are available for this feature:
BLAST of Ec-00_004510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB1_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCM9_ECTSI4.650e-21954.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQ39_9PHAE3.660e-20052.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI5_ECTSI6.640e-10259.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0014553AFF1.240e-6146.29probable glycosyltransferase STELLO2 n=1 Tax=Aster... [more]
A0A7S1INI2_9EUGL6.050e-5946.32Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A8B7XWL1_ACAPL1.880e-5844.33probable glycosyltransferase STELLO2 n=1 Tax=Acant... [more]
A0A4D9D524_9STRA4.120e-5842.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8YW40_NANGC1.940e-5744.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0G4IGI5_PLABS2.520e-5644.41Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:6166386..6171475 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1268.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FZB1
Length3594
Hectar predicted targeting categoryother localisation
Gene idEc-00_004510.1
GOsGO:0000271,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0006073,GO:0006109,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009664,GO:0009832,GO:0009889,GO:0009987,GO:0010383,GO:0010556,GO:0010675,GO:0010962,GO:0010981,GO:0012505,GO:0016043,GO:0016051,GO:0019222,GO:0030243,GO:0030244,GO:0030312,GO:0031323,GO:0031326,GO:0031410,GO:0031982,GO:0031984,GO:0032881,GO:0032885,GO:0032950,GO:0032951,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0050789,GO:0050794,GO:0051128,GO:0051273,GO:0051274,GO:0052324,GO:0052541,GO:0060255,GO:0065007,GO:0070589,GO:0070592,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097708,GO:0098791,GO:1901576,GO:1903338,GO:2000112,GO:2001006,GO:2001009
EggNOG free text desc.plant-type cell wall cellulose biosynthetic process
EggNOG OGs28KU8@1,2QTAG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004510Ec-00_004510Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 6166386..6171475 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004510.1Ec-00_004510.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 6167481..6170818 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004510.1.5Ec-00_004510.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6166386..6168518 -
Ec-00_004510.1.4Ec-00_004510.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6168830..6169030 -
Ec-00_004510.1.3Ec-00_004510.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6169452..6169604 -
Ec-00_004510.1.2Ec-00_004510.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6170027..6170449 -
Ec-00_004510.1.1Ec-00_004510.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6170792..6171475 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0045103UTR:Ec-00_004510.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 6166386..6167480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004510.1CDS:Ec-00_004510.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 6167481..6168518 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0045105UTR:Ec-00_004510.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 6170819..6171475 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_004510.1 ID=Ec-00_004510.1|Name=Ec-00_004510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=614bp
MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAI
VHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALA
NHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQ
ATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVE
QVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALA
VAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQH
TSVDEKLPALQIGRGQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWG
DERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFAL
KLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIY
AGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFT
PGNPLNEAGDVTWVHDPRLDHSGRALKQESADNVCKTHMGLHKIYPDTMT
EVWNKSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETF
TGNTKIHCGAGGC*
back to top

spliced messenger RNA

>Ec-00_004510.1 ID=Ec-00_004510.1|Name=Ec-00_004510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3594bp|location=Sequence derived from alignment at chr_00:6166386..6171475- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AAGCAATTCGAAAGAAAACAAAAACTGGGGACCCCGAATGGTCAATCGGC
TATCTTGGGGTTTACCCGAGAACGTTTCTGATCTTGCTGATACTGCAGAC
CTACCATGCTCACGCAATATGACTGTCATAGATCGGGTACGGCTGCTGTT
GTCTTACGTTGCCAACAGCGAACACATAACTTGGCTACCGTTTTATGTAC
ACGGACACGTAAACACCCCTGACATCGGCATGCCTGCCTGATGAAGACGA
TTCTCCAAGGGTCAAGATCGACAGACGAAGATTAGTTATGGCGTGGTGAC
TCTCGTACGGCGATGCCATCCGCTGGCCCACAAATTTACTTTCAAAGCGA
TATTCCCATACACCAAGGCGGTAGTGTGATCCCAGTGCCCGTACCGCCCG
AAGAGCAAGCGGCCGCCATACCGTCGTATCCTATGACGTGGGGCATATGT
TCTGAACCGGAGGGGTAGAATCTTATATCGATCTGTCGGCCAGTAGCCGT
GTGTCTGACCTAGCTGCAATTCATTGGCTTGACAGGAGTTGCCGAGTACA
ACGTGAACGGGGTGACGTACCTGACACCAGCCGATCAAGACATTTTGCCC
TATCGTATCGGAAAGCAGCTCCCATGGAATCACCTCGGCCGCAAGAACAT
CGGGTACATGTACGCTATTCATCACGGAGCTGAGGTTATTTACGACGTGG
ATGACAGGAACGCGCTCGTCGACCCGCAGCAAGGTGTACCTCATTCTGAC
GTGTCCTCATCTGGGAAGCCGGACGTATTTCGCTTTCACAGCGACGAATC
CGCCATCGTGCACAACCCGTACCCTTGCTTTGGTGCGCCTGGGGTAGTCT
GGCCGAGAGGATTCCCTCTGAACAAGGTTCAACTGGTGGACTCGTCAACC
TGTAGCTCGGAGGGTGCAATGGACAGCCAGGTTATCGGAGTGGTCCAAGC
GCTAGCCAATCATGACCCGGACGTTGACGCAATATATCGGATGACTTACC
CACCCGGCGGACTACCGTTCTCCTTTGTAGCTGAAGATTCTTCGAAGGCA
GAGACCAGGAATTTACGAGCCGTTCCGGCCTCGGCGTTTACTCCATACAA
TGCACAGGCAACCCTTCATTTTCAAGTTGCATTTTGGGGTTTGCTGCTGC
CAACAACGGTCGACGGAAGGGTAAGCGATACCTGGAGAAGCTATTTCACT
CAGGCTCTGCTCCCAGCGGTTGGCGCTGTGGCTGCCTTCTCGCCTGGTTG
GGTGGAACAGGTAGGAAATCCGCGCAACTATCTGGCAGATTTCAAGGCCG
AATTTCCTCTCTACCAAAGGAGCGGGGCACTTGTAGAGTTTCTTCTGCAG
TACCGGGATCTCGTTTCAAACGCGTCAGCCCTGCCACTGGAGATTGAAGC
CCTCGCTGTTGCAATGTACGAGTACGGCATTGTCGAAGACGAGGACGTCG
CGCTCATGCAGGCCTGGCTAGAGGATCTCCGTGATGCTGGCTACGCATTT
CCTGAGTACGATATGCAACACCAATCTACTGCAGCTGGCGTTGCAAGGCA
ACAGCACACCAGTGTTGACGAAAAGTTGCCGGCGTTGCAGATTGGAAGGG
GACAACCTTCACCAGGTGAACTACCTCGCGTTCTGCTGGTGGTGGCGATA
CTGTCTGCCAGGCCCGAACGGAGAAACGCCATCAGATCGACCTGGTCAGC
GTGGGGAGATGAGCGTGTGGAGCTCCGCTTTTTCACGGAGGCCCCTGCCG
AGAATAACCCTGACGCCGAATCTATTACAGCCGCCCTAGAAGAGGAGATG
GCACTTCACCAAGATGTTGTACTAATGGATATCGACTCGGGTATGAATTT
CGCGCTCAAGCTTGTGTGGGCCATGCAGTGGATGTCTCATCGGTGGATGT
TCAATTTCTTCCTTCGTCTGGACGACGACTACTTCCTTTGTCTCGGGCGC
CTCCTACACGAGCTAGAAACAACCTTCAAGACTACACAAGAGCCCCCCAA
GATTTACGCCGGCCACATCACTTGCGGTCGGAGCGGCAACACAAGGATAG
ACGAGGCGTACATGCTTCTATCCACCAGCCTTGTTACCAGAGTGCTGTCG
ACCACTGACCTTATGTGTGGTGGTCATGGCGGGGTCACTGCCGGGTGGTG
GTTCACACCGGGCAACCCGCTCAACGAGGCCGGCGATGTTACATGGGTTC
ACGATCCTCGACTGGATCACTCCGGGAGAGCTCTCAAACAAGAAAGTGCC
GATAACGTGTGCAAAACGCACATGGGGCTGCACAAGATATACCCGGACAC
GATGACGGAGGTTTGGAACAAGAGCCAAGCTTACGACGACAACGACCATG
GTGTTTCGCTCTTGCACTACATTACCGATCAGTCCTGTAAACATGTGCCT
GCTGGCGTCAGTCAATCGACTTTTAACCGTGATCATGCTCAACCCTGCGA
AACGTTCACGGGAAATACCAAGATCCACTGTGGTGCGGGTGGTTGTTGAT
GATCCTGCTTCGACAAGTGGATATCCGCTTGGGTTGCAACCAATGGATAG
AAGGTGCCAACTTGGGGGTCAATTTGTTCGTGTCTGAACGATGAGTACAC
AAAGCTATGACGTTCATGAGGACGAATGTGTTGGACGTTGTAGTCTACAT
GGAGTCGCCATCCTCTGATTTCCGTGCATGGTTTCAAGCCTGTTTCTTTC
CCCTCATCGGGCTAGCGTTATGACGTACCGCAAGAATGTGCGAGAACGCA
CGGGGGTGCGATGGGTGCGATGATTTGGGTTAGGGTTTCCCGTGCGACAA
TCGCATTGTGGTACTTGGTTCTTGGGTTTTCATCGCACGGGGGGTGCGAT
ATCACTGGGACGTGGGATACTGAGGAAACAATAATCGTGGAGTTCTTTGT
CACATACTCTCCATAAGTACAGTACAACATCGTTGACGACCGCGAAGTAA
CTCCTGCGCAGCGAGTGCCCCCGAGCAACTCGGGGCTTGGTGTCGGTGAC
ACCGCACCCCCGTGCGATATCACGGAACTCCGTGCGATATTCGAATTTTA
TCACTTAGTTCTTGGGTTTTTATCATGCCGGGGTGCGCTAACACCGGTAC
GTGCGATATCACCGAACCTTGTGTTCTCTCGTATGCTTACGGTTCTTGTG
CGTGCGCTGCCTTGTAGGTGTCGTTGTTGGTCATGTGTGTTGGTGGTACG
CTGGCAGCGTGGCAGCGTGTCGTCCTAAATCCACTTGGAGAACATACCGC
AGGTACTCGCTGATAAGCAAAACAGCCTACCAGTCAATGCGACAGGAGGG
GCATTGCGTAGTGTTGTGTTGCGTAACTCGGTGGCCCTCAAAACGATGGC
AAATGAGGTGTCGTGTTTTCAGGCTGACTCTTGGGCGAAGTCTTGGATAT
TAAAGTCAAGGGCGCACTTCCAAACTCTCGAGCTTTACGTAGCGGACACG
ATTCCACACTGCCTCGGTTTTACAAGTATCATTTGGTGATGATATGATGT
GTTGCGATGTCATTCCACAACTACGAATTAAGGGCGAGTTTTTACCGGTA
GCACGAAGGGAACACGAGAGACAATTTACTGGCCTCACACTCCG
back to top

protein sequence of Ec-00_004510.1

>Ec-00_004510.1 ID=Ec-00_004510.1|Name=Ec-00_004510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=614bp
MYAIHHGAEVIYDVDDRNALVDPQQGVPHSDVSSSGKPDVFRFHSDESAI
VHNPYPCFGAPGVVWPRGFPLNKVQLVDSSTCSSEGAMDSQVIGVVQALA
NHDPDVDAIYRMTYPPGGLPFSFVAEDSSKAETRNLRAVPASAFTPYNAQ
ATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVE
QVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVSNASALPLEIEALA
VAMYEYGIVEDEDVALMQAWLEDLRDAGYAFPEYDMQHQSTAAGVARQQH
TSVDEKLPALQIGRGQPSPGELPRVLLVVAILSARPERRNAIRSTWSAWG
DERVELRFFTEAPAENNPDAESITAALEEEMALHQDVVLMDIDSGMNFAL
KLVWAMQWMSHRWMFNFFLRLDDDYFLCLGRLLHELETTFKTTQEPPKIY
AGHITCGRSGNTRIDEAYMLLSTSLVTRVLSTTDLMCGGHGGVTAGWWFT
PGNPLNEAGDVTWVHDPRLDHSGRALKQESADNVCKTHMGLHKIYPDTMT
EVWNKSQAYDDNDHGVSLLHYITDQSCKHVPAGVSQSTFNRDHAQPCETF
TGNTKIHCGAGGC*
back to top

mRNA from alignment at chr_00:6166386..6171475-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_004510.1 ID=Ec-00_004510.1|Name=Ec-00_004510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5090bp|location=Sequence derived from alignment at chr_00:6166386..6171475- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AAGCAATTCGAAAGAAAACAAAAACTGGGGACCCCGAATGGTCAATCGGC
TATCTTGGGGTTTACCCGAGAACGTTTCTGATCTTGCTGATACTGCAGAC
CTACCATGCTCACGCAATATGACTGTCATAGATCGGGTACGGCTGCTGTT
GTCTTACGTTGCCAACAGCGAACACATAACTTGGCTACCGTTTTATGTAC
ACGGACACGTAAACACCCCTGACATCGGCATGCCTGCCTGATGAAGACGA
TTCTCCAAGGGTCAAGATCGACAGACGAAGATTAGTTATGGCGTGGTGAC
TCTCGTACGGCGATGCCATCCGCTGGCCCACAAATTTACTTTCAAAGCGA
TATTCCCATACACCAAGGCGGTAGTGTGATCCCAGTGCCCGTACCGCCCG
AAGAGCAAGCGGCCGCCATACCGTCGTATCCTATGACGTGGGGCATATGT
TCTGAACCGGAGGGGTAGAATCTTATATCGATCTGTCGGCCAGTAGCCGT
GTGTCTGACCTAGCTGCAATTCATTGGCTTGACAGGAGTTGCCGAGTACA
ACGTGAACGGGGTGACGTACCTGACACCAGCCGATCAAGACATTTTGCCC
TATCGTATCGGAAAGCAGCTCCCATGGAATCACCTCGGCCGCAAGAACAT
CGGGTACATGTACGCTATTCATCACGGAGCTGAGGTGGGTGGCAACAGAA
CAACCTGATCATGACCATGATGGCCAGCTAACCCAAAAATGCCACTCATT
GAGAAAATCGCCAAGGTATGTCACATGCCAAGGAGATGGAGGTCCCCGAA
GTAAAGACCCGTTCCCCTCTTCCGATGACAATTCATGAGAACGTGATGAG
AAGACCATATCAAGGATTTGGAAAGGTTGAAAGATGGTATGAAACGGAGA
GTCGGGCCGTTTCTTCTAGCCAGAAACTCGTTAGAGAAACTTTAGCCCTA
CGATCAAATAGAGACTCTGACAACTTCTTCCCGCGGCACGTCTGTTACTT
TCGTTGTGACACCATCTCTACATCAGGTTATTTACGACGTGGATGACAGG
AACGCGCTCGTCGACCCGCAGCAAGGTGTACCTCATTCTGACGTGTCCTC
ATCTGGGAAGCCGGACGTATTTCGCTTTCACAGCGACGAATCCGCCATCG
TGCACAACCCGTACCCTTGCTTTGGTGCGCCTGGGGTAGTCTGGCCGAGA
GGATTCCCTCTGAACAAGGTTCAACTGGTGGACTCGTCAACCTGTAGCTC
GGAGGGTGCAATGGACAGCCAGGTTATCGGAGTGGTCCAAGCGCTAGCCA
ATCATGACCCGGACGTTGACGCAATATATCGGATGACTTACCCACCCGGC
GGACTACCGTTCTCCTTTGTAGCTGAAGATTCTTCGAAGGCAGAGACCAG
GAATTTACGAGCCGTTCCGGCCTCGGCGTTTACTCCATACAATGCACAGG
TTGGTTTATCGTTTCCCACGGGTGATGTTTATTGTCGTGACAGGCGACAA
AAATGTCGTGACGGCACGAACGAACAAATTGGGCCCTACTGTAATGGCGT
GTAAACATTTTCGAGCCTCATAGTGACATGGGTCGACCCTGTGATGAGGG
ATATTTTTGGGGGACATCGCCGGTATCGACTACCTCAGTGCGGTCTGCGA
GAGATTCTACCCTATCTGTATATCGAAACCATTGTGCGGGGTTTGTACAA
CCTCTACGGCAAATGCATATCATTGGATGTCTAGAATTGATACAACACCA
GGCTATAAGTACGGATTGGCGTGTACCTTGTACCATGTTGACACTCGACA
CAGGGCAATCAATTGAATAATACCGACAATGTTATGTACGCCTGTTGCTG
GTTCTCAAACAATGGCTGAAGGCAACCCTTCATTTTCAAGTTGCATTTTG
GGGTTTGCTGCTGCCAACAACGGTCGACGGAAGGGTAAGCGATACCTGGA
GAAGCTATTTCACTCAGGCTCTGCTCCCAGCGGTTGGCGCTGTGGCTGCC
TTCTCGCCTGGTTGGGTGGAACAGGTCAGGATCAACGTGAACGACTAGTC
GTAAGATGCTTGAGGTGCGTAAATGAAGATCATAGTGGGTGGACATCACC
CCCCCCCCCGTTTGTTGCATGTCCCCTTGGGGTATATGCCGTTTCGCTGG
CAGTCTCGTGTGTGATTCGCTGTCGTCTACCAGAATTACATGGTGTAGCC
GAGCCTGCTGACAAAAGGGCGTCTTGTTTTGCAGACCATCAGAAGTCGTA
TTAGTATACCACCATGGGACAGAACAACCCGTGAGGTTGTTACTGGTGGC
GTCAGGTGTGCCGTTCTTGGACAGGATCGGCGTAGTAACACGATTTTTCA
TGCGATCTTGGGGTTATCAGCATAGCGGGGGAAGCATACACATCTTAGAC
TTCAACTCTCTGCCACATGTTTCTGGGTCCTGGTCGTCGTGTCAGGTAGG
AAATCCGCGCAACTATCTGGCAGATTTCAAGGCCGAATTTCCTCTCTACC
AAAGGAGCGGGGCACTTGTAGAGTTTCTTCTGCAGTACCGGGATCTCGTT
TCAAACGCGTCAGCCCTGCCACTGGAGATTGAAGCCCTCGCTGTTGCAAT
GTACGAGTACGGCATTGTCGAAGACGAGGACGTCGCGCTCATGCAGGTGG
GCGTTGGTTGGACTTTCGGCAAGGTCCACGGCGTACTTTGATGTTAGGAT
GCACGGTTGGCACTTGAATTTCACTGCTAGATCTCCGCACGGTTCACAAC
GCGTGCGGTACACGTACATTGTTAGCGAGGTCCTTCTTGCCTCCTTGTCA
TGCAGATTTGCGCTTGTGACGCGATGAAGGTGGCAACTACCGTCTTTTAC
ATGTTGCAAGGAAAGACGTTGAGTAGGTAACAATGTCTCCCAGACCATCA
AACATCTCTATGGTTCTGGGCACACCTAATCGTGTTGCTGCAACGACACC
TCGACAGGCCTGGCTAGAGGATCTCCGTGATGCTGGCTACGCATTTCCTG
AGTACGATATGCAACACCAATCTACTGCAGCTGGCGTTGCAAGGCAACAG
CACACCAGTGTTGACGAAAAGTTGCCGGCGTTGCAGATTGGAAGGGGACA
ACCTTCACCAGGTGAACTACCTCGCGTTCTGCTGGTGGTGGCGATACTGT
CTGCCAGGCCCGAACGGAGAAACGCCATCAGATCGACCTGGTCAGCGTGG
GGAGATGAGCGTGTGGAGCTCCGCTTTTTCACGGAGGCCCCTGCCGAGAA
TAACCCTGACGCCGAATCTATTACAGCCGCCCTAGAAGAGGAGATGGCAC
TTCACCAAGATGTTGTACTAATGGATATCGACTCGGGTATGAATTTCGCG
CTCAAGCTTGTGTGGGCCATGCAGTGGATGTCTCATCGGTGGATGTTCAA
TTTCTTCCTTCGTCTGGACGACGACTACTTCCTTTGTCTCGGGCGCCTCC
TACACGAGCTAGAAACAACCTTCAAGACTACACAAGAGCCCCCCAAGATT
TACGCCGGCCACATCACTTGCGGTCGGAGCGGCAACACAAGGATAGACGA
GGCGTACATGCTTCTATCCACCAGCCTTGTTACCAGAGTGCTGTCGACCA
CTGACCTTATGTGTGGTGGTCATGGCGGGGTCACTGCCGGGTGGTGGTTC
ACACCGGGCAACCCGCTCAACGAGGCCGGCGATGTTACATGGGTTCACGA
TCCTCGACTGGATCACTCCGGGAGAGCTCTCAAACAAGAAAGTGCCGATA
ACGTGTGCAAAACGCACATGGGGCTGCACAAGATATACCCGGACACGATG
ACGGAGGTTTGGAACAAGAGCCAAGCTTACGACGACAACGACCATGGTGT
TTCGCTCTTGCACTACATTACCGATCAGTCCTGTAAACATGTGCCTGCTG
GCGTCAGTCAATCGACTTTTAACCGTGATCATGCTCAACCCTGCGAAACG
TTCACGGGAAATACCAAGATCCACTGTGGTGCGGGTGGTTGTTGATGATC
CTGCTTCGACAAGTGGATATCCGCTTGGGTTGCAACCAATGGATAGAAGG
TGCCAACTTGGGGGTCAATTTGTTCGTGTCTGAACGATGAGTACACAAAG
CTATGACGTTCATGAGGACGAATGTGTTGGACGTTGTAGTCTACATGGAG
TCGCCATCCTCTGATTTCCGTGCATGGTTTCAAGCCTGTTTCTTTCCCCT
CATCGGGCTAGCGTTATGACGTACCGCAAGAATGTGCGAGAACGCACGGG
GGTGCGATGGGTGCGATGATTTGGGTTAGGGTTTCCCGTGCGACAATCGC
ATTGTGGTACTTGGTTCTTGGGTTTTCATCGCACGGGGGGTGCGATATCA
CTGGGACGTGGGATACTGAGGAAACAATAATCGTGGAGTTCTTTGTCACA
TACTCTCCATAAGTACAGTACAACATCGTTGACGACCGCGAAGTAACTCC
TGCGCAGCGAGTGCCCCCGAGCAACTCGGGGCTTGGTGTCGGTGACACCG
CACCCCCGTGCGATATCACGGAACTCCGTGCGATATTCGAATTTTATCAC
TTAGTTCTTGGGTTTTTATCATGCCGGGGTGCGCTAACACCGGTACGTGC
GATATCACCGAACCTTGTGTTCTCTCGTATGCTTACGGTTCTTGTGCGTG
CGCTGCCTTGTAGGTGTCGTTGTTGGTCATGTGTGTTGGTGGTACGCTGG
CAGCGTGGCAGCGTGTCGTCCTAAATCCACTTGGAGAACATACCGCAGGT
ACTCGCTGATAAGCAAAACAGCCTACCAGTCAATGCGACAGGAGGGGCAT
TGCGTAGTGTTGTGTTGCGTAACTCGGTGGCCCTCAAAACGATGGCAAAT
GAGGTGTCGTGTTTTCAGGCTGACTCTTGGGCGAAGTCTTGGATATTAAA
GTCAAGGGCGCACTTCCAAACTCTCGAGCTTTACGTAGCGGACACGATTC
CACACTGCCTCGGTTTTACAAGTATCATTTGGTGATGATATGATGTGTTG
CGATGTCATTCCACAACTACGAATTAAGGGCGAGTTTTTACCGGTAGCAC
GAAGGGAACACGAGAGACAATTTACTGGCCTCACACTCCG
back to top

Coding sequence (CDS) from alignment at chr_00:6166386..6171475-

>Ec-00_004510.1 ID=Ec-00_004510.1|Name=Ec-00_004510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1842bp|location=Sequence derived from alignment at chr_00:6166386..6171475- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTACGCTATTCATCACGGAGCTGAGGTTATTTACGACGTGGATGACAG
GAACGCGCTCGTCGACCCGCAGCAAGGTGTACCTCATTCTGACGTGTCCT
CATCTGGGAAGCCGGACGTATTTCGCTTTCACAGCGACGAATCCGCCATC
GTGCACAACCCGTACCCTTGCTTTGGTGCGCCTGGGGTAGTCTGGCCGAG
AGGATTCCCTCTGAACAAGGTTCAACTGGTGGACTCGTCAACCTGTAGCT
CGGAGGGTGCAATGGACAGCCAGGTTATCGGAGTGGTCCAAGCGCTAGCC
AATCATGACCCGGACGTTGACGCAATATATCGGATGACTTACCCACCCGG
CGGACTACCGTTCTCCTTTGTAGCTGAAGATTCTTCGAAGGCAGAGACCA
GGAATTTACGAGCCGTTCCGGCCTCGGCGTTTACTCCATACAATGCACAG
GCAACCCTTCATTTTCAAGTTGCATTTTGGGGTTTGCTGCTGCCAACAAC
GGTCGACGGAAGGGTAAGCGATACCTGGAGAAGCTATTTCACTCAGGCTC
TGCTCCCAGCGGTTGGCGCTGTGGCTGCCTTCTCGCCTGGTTGGGTGGAA
CAGGTAGGAAATCCGCGCAACTATCTGGCAGATTTCAAGGCCGAATTTCC
TCTCTACCAAAGGAGCGGGGCACTTGTAGAGTTTCTTCTGCAGTACCGGG
ATCTCGTTTCAAACGCGTCAGCCCTGCCACTGGAGATTGAAGCCCTCGCT
GTTGCAATGTACGAGTACGGCATTGTCGAAGACGAGGACGTCGCGCTCAT
GCAGGCCTGGCTAGAGGATCTCCGTGATGCTGGCTACGCATTTCCTGAGT
ACGATATGCAACACCAATCTACTGCAGCTGGCGTTGCAAGGCAACAGCAC
ACCAGTGTTGACGAAAAGTTGCCGGCGTTGCAGATTGGAAGGGGACAACC
TTCACCAGGTGAACTACCTCGCGTTCTGCTGGTGGTGGCGATACTGTCTG
CCAGGCCCGAACGGAGAAACGCCATCAGATCGACCTGGTCAGCGTGGGGA
GATGAGCGTGTGGAGCTCCGCTTTTTCACGGAGGCCCCTGCCGAGAATAA
CCCTGACGCCGAATCTATTACAGCCGCCCTAGAAGAGGAGATGGCACTTC
ACCAAGATGTTGTACTAATGGATATCGACTCGGGTATGAATTTCGCGCTC
AAGCTTGTGTGGGCCATGCAGTGGATGTCTCATCGGTGGATGTTCAATTT
CTTCCTTCGTCTGGACGACGACTACTTCCTTTGTCTCGGGCGCCTCCTAC
ACGAGCTAGAAACAACCTTCAAGACTACACAAGAGCCCCCCAAGATTTAC
GCCGGCCACATCACTTGCGGTCGGAGCGGCAACACAAGGATAGACGAGGC
GTACATGCTTCTATCCACCAGCCTTGTTACCAGAGTGCTGTCGACCACTG
ACCTTATGTGTGGTGGTCATGGCGGGGTCACTGCCGGGTGGTGGTTCACA
CCGGGCAACCCGCTCAACGAGGCCGGCGATGTTACATGGGTTCACGATCC
TCGACTGGATCACTCCGGGAGAGCTCTCAAACAAGAAAGTGCCGATAACG
TGTGCAAAACGCACATGGGGCTGCACAAGATATACCCGGACACGATGACG
GAGGTTTGGAACAAGAGCCAAGCTTACGACGACAACGACCATGGTGTTTC
GCTCTTGCACTACATTACCGATCAGTCCTGTAAACATGTGCCTGCTGGCG
TCAGTCAATCGACTTTTAACCGTGATCATGCTCAACCCTGCGAAACGTTC
ACGGGAAATACCAAGATCCACTGTGGTGCGGGTGGTTGTTGA
back to top
Synonyms
The feature 'Ec-00_004510.1' has the following synonyms
Synonym
Esi0360_0006
Esi_0360_0006