Ec-00_004480.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_004480.1
Unique NameEc-00_004480.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length401
Homology
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BLAST of Ec-00_004480.1 vs. uniprot
Match: D7FZ43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ43_ECTSI)

HSP 1 Score: 664 bits (1712), Expect = 1.210e-238
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKVQVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKVQVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN
Sbjct:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKVQVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 400
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5KRQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ2_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 5.780e-168
Identity = 319/401 (79.55%), Postives = 337/401 (84.04%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            MG WAINQG ARCGPGAKATS QEAVAADNIA GSRSGA  GGRASGRVSP SSIGGARPASE   XXXXXXXXXXXXXXXX+DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAGVTTEEADYFL  GFTADEVQ ER VA MTVLLDKR +LQRDG SV+D +D+LG+ ED QLPG D  +ESVMF LL+ YGV    FRSLP+SNWFH G P+ERVTP KV QVTKRVARLLVLGAGVTNSGLSAAGQTSI G     GARAMSGMDP  AAS  SGNRGRK RAKTN LA++GLDSFMERQ A A+ LADQK EE       E KRE+GRRQEL+DMMAHERAMREDERKXXXXXXXXXXXXXXX  KADRDHQI+MMQLQVDLAKAKGNNN
Sbjct:   88 MGMWAINQGKARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGRVSPASSIGGARPASEASAXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTADEVQPERAVAKMTVLLDKRRSLQRDGDSVQDSMDDLGE-EDMQLPGFDRFDESVMFKLLEPYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGPATVGGARAMSGMDPLGAASGPSGNRGRKPRAKTNYLAKDGLDSFMERQAADARALADQKREEXXXXXXTEAKREVGRRQELLDMMAHERAMREDERKXXXXXXXXXXXXXXXXXKADRDHQIRMMQLQVDLAKAKGNNN 487
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5L4P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P2_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 1.050e-162
Identity = 319/417 (76.50%), Postives = 338/417 (81.06%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLD----------------SFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            MG WAINQGNARCGP AK TS +EAVAADNIA GSRSGAAAGGRASGRVSP SSIGGARPASEXXXXXXXXXXXXXXXXXXX+DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAGVTTEEADYFL  GFT DEVQ ER VAMM VLLD R  +QRDG SV+ Y+D LG+ ED +LPG DG +ESVMF LL+LYGV K  F SLPD+NWFH G P++RVTP KV QVTKRVA LLVLGAGVTNS LSAAGQTS  GS    GA AMS        S  SGNRGRK RAKTNKLAE+GLD                SFMERQVA A+ LADQK  EDERRRAAE KRE+GRRQEL+DMMAHERAMREDERKXXXXXXXXXXXXXXX  KADRDHQI+MMQLQVDLAKAKGNNN
Sbjct:   38 MGMWAINQGNARCGPSAKVTSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGE-EDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTNKLAEDGLDREVLTYPGASLAPTCPSFMERQVADARALADQKRGEDERRRAAEAKREVGRRQELLDMMAHERAMREDERKXXXXXXXXXXXXXXXXXKADRDHQIRMMQLQVDLAKAKGNNN 453
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5JQZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ1_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 5.200e-157
Identity = 298/400 (74.50%), Postives = 317/400 (79.25%), Query Frame = 1 
Query:   10 WAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMG-------SLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKA 1185
            WAIN+GNARCGPGAKATS +EAVAADNIA GSRSGAAAGGRASGRV+P SSIGG RPASE  XXXXXXXXXXXXXXXXX DDD SPAGSG SRKVPPLG LV           SLSIPT AQSAGVTTE+ADYFL  GFTADEVQ ER VAMM VLLDKR + QRDG SV+DY+D+LG+ ED QLPG D  +ESVMF LL+LYGV    FRSLP+SNWFH G P+ERVTP KV QVTKRVARLLVLGAGVTNSGLSAAGQTSI GS     ARAMSGMDPS  AS  SGNRGRK RAKTNKLAE+GLDSFMERQVA A+ LADQK EE       E KRE+GRRQEL+DMMAHERAMREDERK             XX QK DRDHQI+MMQLQV  A+A
Sbjct:    2 WAINKGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVNPASSIGGLRPASEVSXXXXXXXXXXXXXXXXXXDDDFSPAGSGPSRKVPPLGDLVXXXXXXXXXXXSLSIPTPAQSAGVTTEDADYFLNTGFTADEVQPERAVAMMAVLLDKRLSPQRDGDSVQDYMDDLGE-EDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATEGCARAMSGMDPSGVASGPSGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKREEXXXXXXXEAKREVGRRQELLDMMAHERAMREDERKHDRQEREMERATAXXXQKEDRDHQIRMMQLQVADARA 400
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 3.490e-141
Identity = 285/401 (71.07%), Postives = 304/401 (75.81%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            MG WAINQGNARCGPGAKATS QEAVAADNIA GSRSGA  GGRASG VSP SSIGGARPASE   XXXXXXXXXXXXXXX +DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAGVTTEEADYFL  GFT DEVQ ER VAMM VLLD R  +QRDG SV+ Y+D LG+ ED +LPG DG +ESVMF LL+LYGV K  F SLPD+NWFH G P++RVTP KV QVTKRVA LLVLGAGVTNS LSAAGQTS  GS    GA AMS        S  SGNRGRK RAKT KLAE+GLDSFMERQVA A+ L                  E+GRRQEL+DMMAHE AMRE ERK     XXXXXXXXXX       HQI++MQ QVDLAKAKGNNN
Sbjct:  218 MGMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGWVSPASSIGGARPASEASAXXXXXXXXXXXXXXXGLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGE-EDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLXXXXXXXXXXXXXXXXXXEVGRRQELLDMMAHESAMREAERKHDRQEXXXXXXXXXXXXXXXXXHQIRIMQFQVDLAKAKGNNN 617
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5K579_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K579_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 1.180e-137
Identity = 294/472 (62.29%), Postives = 312/472 (66.10%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAV----------------------AADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAG-------------------------------------------------VTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            MG WAINQGNARCGPGAKATS QEA                       AADN A G RSGAAAGGRASGRVSP SSIGGARPASEXXXXXXXXXXXXXXXXXXX+DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAG                                                 VTTEEADYFL  GFT DEVQ ER VAMM VLLD R  +QRDG SV+ +                  +ESVMF LL+LYG+    FRSLP+SN FH G P+ERVTP KV QVTKRVARLLVLGAGVTNSGLSAAGQTSI GS     ARAMSGMDPS AAS  SGNRGRK RAKTNKLAE+GLDSF+ERQVA A+ LADQK EE       E KRE+GRRQEL+DMMAHERAMREDERK               +QK DRD QI+MMQLQVDLAKAKGNNN
Sbjct:  276 MGMWAINQGNARCGPGAKATSFQEAXXXXXXXXXXXXXXXXXXXXXXXAADNNALGYRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGADYFLDTGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQF------------------DESVMFKLLELYGMETMDFRSLPESNRFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATVGDARAMSGMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFIERQVADARALADQKREEXXXXXXXEAKREVGRRQELLDMMAHERAMREDERKHDRQEREVERAAAWAEQKGDRDRQIRMMQLQVDLAKAKGNNN 729
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5KX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX39_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 5.580e-133
Identity = 244/305 (80.00%), Postives = 260/305 (85.25%), Query Frame = 1 
Query:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVE-RVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLD 909
            MG WAINQGNARCGPGAKATS +EAVAADNIA GSRSGAAAGGRASGRVSP SSIG ARPASEXXXXXXXXXXXXXXXX   +DDD SPAGSG SRKVPPLG LV HMGSLSIPTLAQSAG+TTEEAD+FL  GFTADEVQ ER VA MTVLLDKR +LQRDG SV+DY+D+LG+ ED QLPG D  +ESVMF LL+LYGV    FRSLP+SNWFH G P+E RVTP K+ Q+TKRVARLLVLGAGVTNSGLSAA QTSI GS    GARAMSGMDPS  AS  SGNRGRK RAKTNKLAE+GLD
Sbjct:   68 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGWARPASEXXXXXXXXXXXXXXXXTGGLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAQSAGITTEEADFFLNTGFTADEVQPERAVATMTVLLDKRLSLQRDGDSVQDYMDDLGE-EDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIEQRVTPDKLLQITKRVARLLVLGAGVTNSGLSAADQTSIPGSATVGGARAMSGMDPSGTASGPSGNRGRKPRAKTNKLAEDGLD 371
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5KDK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK9_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 3.900e-116
Identity = 222/319 (69.59%), Postives = 240/319 (75.24%), Query Frame = 1 
Query:  247 IDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 1200
            +DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAGVTTEEADYFL  GFT DEVQ ER VAMM VLLD R  +QRDG SV+ Y+D LG+ ED +LPG DG +ESVMF LL+L GV K  F SLPD+NWFH G P++RVTP KV QVTKRVA LLVLGAGVTNS LSAAGQTS  GS    GA AMS        S  SGNRGRK RAKT KLAE+GLDSFMERQVA A+ LADQ+ EEDERR AAE KRE+GRRQEL+DMMAHERAMREDERK     XXXXXXXXXX                 DLAKAKGNNN
Sbjct:    6 LDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGE-EDCELPGFDGFDESVMFKLLELSGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLADQRREEDERRWAAEAKREVGRRQELLDMMAHERAMREDERKHDRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXDLAKAKGNNN 323
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5JZP1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP1_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 1.450e-114
Identity = 198/252 (78.57%), Postives = 212/252 (84.13%), Query Frame = 1 
Query:  247 IDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENK 999
            +DDD SPAGSG SRKVPPLG LV HMGSLSIPTLAQSAGVTTE+ADYFL  GFTADEVQ ER VAMMTVLLDKR +LQRDG SV+D +D+LG+ ED QLPG D  +ESVMF LL+LYGV    FRSLP+SNWFH G P+ERVTP KV Q+TKRVARLLVLGAGVTNSGLSAA QTSI GS    GARAMSGMDPS AAS  SGNRGRK RAKTNK AE+GLDSFMERQVA A+ LADQK EEDERRRAAE K
Sbjct:    6 LDDDLSPAGSGPSRKVPPLGELVIHMGSLSIPTLAQSAGVTTEDADYFLNTGFTADEVQPERAVAMMTVLLDKRLSLQRDGDSVQDCMDDLGE-EDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQITKRVARLLVLGAGVTNSGLSAADQTSIPGSATVGGARAMSGMDPSGAASGPSGNRGRKPRAKTNKFAEDGLDSFMERQVADARALADQKREEDERRRAAEAK 256
[Close]
BLAST of Ec-00_004480.1 vs. uniprot
Match: A0A6H5L7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S4_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 5.910e-107
Identity = 233/370 (62.97%), Postives = 252/370 (68.11%), Query Frame = 1 
Query:  115 AAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGL--------DSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNN 1197
            A+AGG ASGR SP  S GG                         +DDD SPAGSG SRKVPPLG LV HMGSL+IP LA+SAGVTTEEADYFL  GFT DEVQ ER VA+MTVLLDKR +LQRDG S               LPG    +ESVMF L +LYGV   GFRSLP+SNWFH   P++RVTP KV QVTKRVA LLVLGAGVTNS LSAAGQTS  GS    GA AM              NRGRK RAKT KLA++GL               VA A+ LADQ+ EEDERR AAE KRE+GRRQEL+DMMAHERAMREDERKXXXXXXXXXXXXXXX  KADRD+QI+MMQLQVDLAKAKGNN
Sbjct:  108 ASAGGAASGRSSPTMSTGG-------------------------LDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAIMTVLLDKRLSLQRDGDS---------------LPGFGRFDESVMFKLPELYGVEMMGFRSLPESNWFHSRWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMXXXXXXXXXXXXXXNRGRKPRAKTKKLAKDGLVRWQSLGHSPIRNXAVADARSLADQRREEDERRWAAEAKREVGRRQELLDMMAHERAMREDERKXXXXXXXXXXXXXXXXXKADRDNQIRMMQLQVDLAKAKGNN 437
The following BLAST results are available for this feature:
BLAST of Ec-00_004480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ43_ECTSI1.210e-238100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRQ2_9PHAE5.780e-16879.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4P2_9PHAE1.050e-16276.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ1_9PHAE5.200e-15774.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXD3_9PHAE3.490e-14171.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K579_9PHAE1.180e-13762.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX39_9PHAE5.580e-13380.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK9_9PHAE3.900e-11669.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZP1_9PHAE1.450e-11478.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7S4_9PHAE5.910e-10762.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:6039468..6040869 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1203
Hectar predicted targeting categoryother localisation
Gene idEc-00_004480.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004480Ec-00_004480Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 6039468..6040869 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004480.1.1Ec-00_004480.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6039468..6040378 +
Ec-00_004480.1.2Ec-00_004480.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 6040578..6040869 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004480.1CDS:Ec-00_004480.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 6039468..6040378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004480.1Ec-00_004480.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 6039468..6040869 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_004480.1 ID=Ec-00_004480.1|Name=Ec-00_004480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=401bp
MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVS
PVSSIGGARPASEASAGGQNSGRSSPTMSTGGIDDDSSPAGSGSSRKVPP
LGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMT
VLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYG
VGKRGFRSLPDSNWFHCGRPVERVTPGKVQVTKRVARLLVLGAGVTNSGL
SAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEE
GLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHER
AMREDERKHDRQEREEERAAARADQKADRDHQIKMMQLQVDLAKAKGNNN
*
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spliced messenger RNA

>Ec-00_004480.1 ID=Ec-00_004480.1|Name=Ec-00_004480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1203bp|location=Sequence derived from alignment at chr_00:6039468..6040869+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGACGTGGGCCATCAACCAGGGCAACGCCCGTTGCGGGCCGGGCGC
GAAGGCTACATCAGTCCAAGAAGCTGTCGCCGCCGACAACATCGCGTGGG
GTTCCCGCTCCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGT
CCGGTCAGCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGG
TGGCCAAAACAGCGGTCGATCGAGCCCGACCATGAGTACGGGTGGGATAG
ACGACGACTCATCGCCCGCGGGGAGCGGGTCATCGAGGAAGGTTCCGCCG
CTTGGTGGATTGGTGACGCACATGGGGTCGCTGAGCATTCCGACGCTTGC
GCAAAGTGCCGGTGTCACCACGGAGGAGGCGGACTACTTCCTCAAGGCGG
GCTTCACGGCTGACGAAGTTCAGACGGAAAGGACCGTGGCGATGATGACG
GTTTTACTCGACAAACGGCCTACTCTACAGCGCGACGGACACAGCGTCGA
GGATTACGTTGATGAGCTAGGTGATGACGAGGATGCGCAGCTGCCCGGAG
TTGACGGTGTCAACGAGTCGGTCATGTTTGATCTGCTCGATCTTTACGGC
GTGGGAAAGAGGGGCTTCCGCAGCCTGCCGGATTCGAATTGGTTTCACTG
CGGAAGGCCCGTAGAACGTGTGACGCCGGGCAAGGTTCAGGTTACGAAGC
GGGTGGCGAGGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCGGGCTG
TCCGCCGCCGGTCAGACATCCATCTCCGGTTCTACAGCAGCTAGGGGTGC
GCGCGCCATGTCAGGCATGGACCCTTCACGGGCGGCGAGTAGGGCTTCGG
GAAACCGTGGAAGGAAGACCCGTGCCAAGACCAATAAGCTCGCCGAGGAG
GGGCTAGATAGCTTCATGGAGCGACAGGTGGCTCAAGCTCAGAAACTCGC
CGATCAGAAACATGAAGAGGACGAGAGGAGGCGGGCGGCGGAAAATAAAC
GAGAACTAGGGAGGAGGCAAGAGCTCGTGGACATGATGGCCCACGAGAGG
GCCATGCGGGAGGATGAAAGGAAACACGACAGACAAGAGCGTGAAGAGGA
GAGGGCGGCTGCACGGGCAGATCAAAAGGCAGATCGCGATCACCAAATCA
AGATGATGCAACTGCAGGTGGACCTGGCGAAGGCGAAGGGGAACAACAAC
TAG
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protein sequence of Ec-00_004480.1

>Ec-00_004480.1 ID=Ec-00_004480.1|Name=Ec-00_004480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=401bp
MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVS
PVSSIGGARPASEASAGGQNSGRSSPTMSTGGIDDDSSPAGSGSSRKVPP
LGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMT
VLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYG
VGKRGFRSLPDSNWFHCGRPVERVTPGKVQVTKRVARLLVLGAGVTNSGL
SAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEE
GLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHER
AMREDERKHDRQEREEERAAARADQKADRDHQIKMMQLQVDLAKAKGNNN
*
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mRNA from alignment at chr_00:6039468..6040869+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_004480.1 ID=Ec-00_004480.1|Name=Ec-00_004480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1402bp|location=Sequence derived from alignment at chr_00:6039468..6040869+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGACGTGGGCCATCAACCAGGGCAACGCCCGTTGCGGGCCGGGCGC
GAAGGCTACATCAGTCCAAGAAGCTGTCGCCGCCGACAACATCGCGTGGG
GTTCCCGCTCCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGT
CCGGTCAGCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGG
TGGCCAAAACAGCGGTCGATCGAGCCCGACCATGAGTACGGGTGGGATAG
ACGACGACTCATCGCCCGCGGGGAGCGGGTCATCGAGGAAGGTTCCGCCG
CTTGGTGGATTGGTGACGCACATGGGGTCGCTGAGCATTCCGACGCTTGC
GCAAAGTGCCGGTGTCACCACGGAGGAGGCGGACTACTTCCTCAAGGCGG
GCTTCACGGCTGACGAAGTTCAGACGGAAAGGACCGTGGCGATGATGACG
GTTTTACTCGACAAACGGCCTACTCTACAGCGCGACGGACACAGCGTCGA
GGATTACGTTGATGAGCTAGGTGATGACGAGGATGCGCAGCTGCCCGGAG
TTGACGGTGTCAACGAGTCGGTCATGTTTGATCTGCTCGATCTTTACGGC
GTGGGAAAGAGGGGCTTCCGCAGCCTGCCGGATTCGAATTGGTTTCACTG
CGGAAGGCCCGTAGAACGTGTGACGCCGGGCAAGGTTCAGGTTACGAAGC
GGGTGGCGAGGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCGGGCTG
TCCGCCGCCGGTCAGACATCCATCTCCGGTTCTACAGCAGCTAGGGGTGC
GCGCGCCATGTCAGGCATGGACCCTTCACGGGCGGCGAGTAGGGCTTCGG
GAAACCGTGGAAGGAAGACCCGTGCCAAGACCAATAAGCTCGCCGAGGAG
GGGCTAGATAGGTAAGGCTGTTCGTCGACTCTGTCCATGTCTTGGTTCTG
GCAACTCCTTCGTGCGGTAGACGCCGTGCATTATCGTCAGATTATTTTGG
TGGACGTAACCTATACCAGAGAAGTATTATTGTTGGCTACTCCATCAGGG
AGGTGCCAGAACTTACCCTACCCTGGTGCCTCTCTTGCGCGATTGTGCCA
CGTGTCCCAGCTTCATGGAGCGACAGGTGGCTCAAGCTCAGAAACTCGCC
GATCAGAAACATGAAGAGGACGAGAGGAGGCGGGCGGCGGAAAATAAACG
AGAACTAGGGAGGAGGCAAGAGCTCGTGGACATGATGGCCCACGAGAGGG
CCATGCGGGAGGATGAAAGGAAACACGACAGACAAGAGCGTGAAGAGGAG
AGGGCGGCTGCACGGGCAGATCAAAAGGCAGATCGCGATCACCAAATCAA
GATGATGCAACTGCAGGTGGACCTGGCGAAGGCGAAGGGGAACAACAACT
AG
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Coding sequence (CDS) from alignment at chr_00:6039468..6040869+

>Ec-00_004480.1 ID=Ec-00_004480.1|Name=Ec-00_004480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1203bp|location=Sequence derived from alignment at chr_00:6039468..6040869+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGACGTGGGCCATCAACCAGGGCAACGCCCGTTGCGGGCCGGGCGC
GAAGGCTACATCAGTCCAAGAAGCTGTCGCCGCCGACAACATCGCGTGGG
GTTCCCGCTCCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGT
CCGGTCAGCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGG
TGGCCAAAACAGCGGTCGATCGAGCCCGACCATGAGTACGGGTGGGATAG
ACGACGACTCATCGCCCGCGGGGAGCGGGTCATCGAGGAAGGTTCCGCCG
CTTGGTGGATTGGTGACGCACATGGGGTCGCTGAGCATTCCGACGCTTGC
GCAAAGTGCCGGTGTCACCACGGAGGAGGCGGACTACTTCCTCAAGGCGG
GCTTCACGGCTGACGAAGTTCAGACGGAAAGGACCGTGGCGATGATGACG
GTTTTACTCGACAAACGGCCTACTCTACAGCGCGACGGACACAGCGTCGA
GGATTACGTTGATGAGCTAGGTGATGACGAGGATGCGCAGCTGCCCGGAG
TTGACGGTGTCAACGAGTCGGTCATGTTTGATCTGCTCGATCTTTACGGC
GTGGGAAAGAGGGGCTTCCGCAGCCTGCCGGATTCGAATTGGTTTCACTG
CGGAAGGCCCGTAGAACGTGTGACGCCGGGCAAGGTTCAGGTTACGAAGC
GGGTGGCGAGGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCGGGCTG
TCCGCCGCCGGTCAGACATCCATCTCCGGTTCTACAGCAGCTAGGGGTGC
GCGCGCCATGTCAGGCATGGACCCTTCACGGGCGGCGAGTAGGGCTTCGG
GAAACCGTGGAAGGAAGACCCGTGCCAAGACCAATAAGCTCGCCGAGGAG
GGGCTAGATAGCTTCATGGAGCGACAGGTGGCTCAAGCTCAGAAACTCGC
CGATCAGAAACATGAAGAGGACGAGAGGAGGCGGGCGGCGGAAAATAAAC
GAGAACTAGGGAGGAGGCAAGAGCTCGTGGACATGATGGCCCACGAGAGG
GCCATGCGGGAGGATGAAAGGAAACACGACAGACAAGAGCGTGAAGAGGA
GAGGGCGGCTGCACGGGCAGATCAAAAGGCAGATCGCGATCACCAAATCA
AGATGATGCAACTGCAGGTGGACCTGGCGAAGGCGAAGGGGAACAACAAC
TAG
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Synonyms
The feature 'Ec-00_004480.1' has the following synonyms
Synonym
Esi0354_0019
Esi_0354_0019