Ec-00_004420.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_004420.1
Unique NameEc-00_004420.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length211
Homology
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BLAST of Ec-00_004420.1 vs. uniprot
Match: D7FZ28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ28_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 1.170e-150
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 630
            MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL
Sbjct:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 210
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BLAST of Ec-00_004420.1 vs. uniprot
Match: D7FWX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX9_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.100e-127
Identity = 190/196 (96.94%), Postives = 190/196 (96.94%), Query Frame = 1 
Query:   43 MLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 630
            MLDFVLHPSSPDTSGIPVEDERLQKV EWVSKQEDPIDGELLPDASQTAKELL KGLFKD FTAALLNGIEPEDGGGVGTPFESE NGDCLLNSVAA FAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCA LMFLAQLRSIAKPGAWL
Sbjct:    1 MLDFVLHPSSPDTSGIPVEDERLQKVTEWVSKQEDPIDGELLPDASQTAKELLTKGLFKDKFTAALLNGIEPEDGGGVGTPFESESNGDCLLNSVAAFFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCAWLMFLAQLRSIAKPGAWL 196
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 1.950e-114
Identity = 186/216 (86.11%), Postives = 194/216 (89.81%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELL------AKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 630
            MANSQLQALAKVRG LDFVLHPSSPDTSGIPVEDERLQKV E VSKQ+DP+DGELLPDAS+   EL        +GLFK  FTAALLNG++PEDGGGVGTPFESEGNGDCLLNSVAA  AKEGGRGVRSAVKTMAVKLRLSVVLYGLKYME+FLLEQD HFGAWYNYT+DVRERLEKNGWHVV  VDNNWHVGSSNCARLMFLAQLRS AKPGAWL
Sbjct:    1 MANSQLQALAKVRGTLDFVLHPSSPDTSGIPVEDERLQKVTECVSKQDDPVDGELLPDASKVHGELTDRKGAPGEGLFKGKFTAALLNGVKPEDGGGVGTPFESEGNGDCLLNSVAAFLAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMELFLLEQDYHFGAWYNYTTDVRERLEKNGWHVV-HVDNNWHVGSSNCARLMFLAQLRSKAKPGAWL 215
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5KLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL4_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 2.740e-111
Identity = 162/190 (85.26%), Postives = 172/190 (90.53%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSN 570
            M++SQLQALAKVRGMLDFVLHPSSPDTSGIPV DE+L+KVMEWVSK EDPIDGELLP ASQTA+EL+AKGLFKD FTAALLNGIEPEDGGGVGTPFES+GNGDCLLNSVAA FAK+GGRGVRSAVKTMAVKLRLSVVLYGLKYME+FLLEQD+HFGAWYNYTSDV ERL KNGW   PD D     G  N
Sbjct:    1 MSSSQLQALAKVRGMLDFVLHPSSPDTSGIPVGDEKLRKVMEWVSKWEDPIDGELLPGASQTAEELVAKGLFKDKFTAALLNGIEPEDGGGVGTPFESDGNGDCLLNSVAAFFAKDGGRGVRSAVKTMAVKLRLSVVLYGLKYMELFLLEQDEHFGAWYNYTSDVWERLAKNGWDGAPDPDKTGTSGRQN 190
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5JBV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV0_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 4.410e-111
Identity = 169/210 (80.48%), Postives = 183/210 (87.14%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTA---KELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPG 621
            M++SQLQALAKVRGMLDFVLHPSSPDTSGIPV DE+L+KVMEWV K+EDPIDGELLPDA Q     +    +   + +  A LLNGIEPEDGGGVGTPFES+GNGDCLLNSVAA FAK+GGRGVRSAVKTMAVKLR+SVVLYGLKYME+FLLEQD+H GAWYNYTSDVRERL KNGW V PD  NNWHVGSS CARLMFLAQLRSIAKPG
Sbjct:    1 MSSSQLQALAKVRGMLDFVLHPSSPDTSGIPVGDEKLRKVMEWVFKREDPIDGELLPDACQVCAPQRSFWPRACLRTSSPATLLNGIEPEDGGGVGTPFESDGNGDCLLNSVAAFFAKDGGRGVRSAVKTMAVKLRVSVVLYGLKYMELFLLEQDEHLGAWYNYTSDVRERLGKNGWDVAPDRGNNWHVGSSKCARLMFLAQLRSIAKPG 210
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5KB76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB76_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 3.850e-101
Identity = 163/189 (86.24%), Postives = 165/189 (87.30%), Query Frame = 1 
Query:   64 PSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 630
            P SPDTSGIPVEDERLQKV EWVSKQEDPIDGELLPDASQTAKELLAKGLFKD FTAALLNG+EPED GGVGTPFESEGNGDCLLNSVAALFA EGGRGVRSAVKTMAVKLR SV               D HFG WYNYTSDVR+RLEKNGWHVVPDVDNNWHVGSS CARLMFLAQLRSIAKPGAWL
Sbjct:   16 PVSPDTSGIPVEDERLQKVTEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDKFTAALLNGVEPEDDGGVGTPFESEGNGDCLLNSVAALFANEGGRGVRSAVKTMAVKLRFSV---------------DGHFGVWYNYTSDVRKRLEKNGWHVVPDVDNNWHVGSSKCARLMFLAQLRSIAKPGAWL 189
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5K057_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K057_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.850e-96
Identity = 148/185 (80.00%), Postives = 158/185 (85.41%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWH 555
            M++SQLQALAKVRGMLDFVLHPSSPDTSGIPV DE+L+KVMEWVSK+EDPIDGELLPDA QTA+ELLAKGLFKD FTAALLNGIEPEDGG VGTPFES+GNGDCLLNSVA                TMAVKLRLSVVLYGLKYME+FLLEQD+HFGAWYNYTSD RERL KNGW V PD D  +H
Sbjct:    1 MSSSQLQALAKVRGMLDFVLHPSSPDTSGIPVGDEKLRKVMEWVSKREDPIDGELLPDACQTAEELLAKGLFKDKFTAALLNGIEPEDGG-VGTPFESDGNGDCLLNSVA----------------TMAVKLRLSVVLYGLKYMELFLLEQDEHFGAWYNYTSDTRERLAKNGWDVAPDPDXRFH 168
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5JY21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY21_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 7.960e-85
Identity = 157/239 (65.69%), Postives = 159/239 (66.53%), Query Frame = 1 
Query:    1 MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQ-----------------------------TAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPGAWL 630
            MANSQLQ LAK                           KV EWVSKQEDP DGELLPDASQ                             TAKEL AKGLFKD FTAALLNG+EPEDGGGVGTPF SEGNGDCLLNSVAA FAKEGGRGVRSAV+TMAVKLRLSV               DDHFGAWYNYTSDVRERLEKN WHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKP AWL
Sbjct:    1 MANSQLQVLAK---------------------------KVTEWVSKQEDP-DGELLPDASQVPGELTVFSTLTINLIIYGRNVSSSIPVQTAKELQAKGLFKDKFTAALLNGVEPEDGGGVGTPFGSEGNGDCLLNSVAAFFAKEGGRGVRSAVQTMAVKLRLSV---------------DDHFGAWYNYTSDVRERLEKNEWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPRAWL 196
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BLAST of Ec-00_004420.1 vs. uniprot
Match: A0A6H5JP53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP53_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.490e-77
Identity = 124/166 (74.70%), Postives = 138/166 (83.13%), Query Frame = 1 
Query:   43 MLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNG--WHVVP 534
            MLDFVLHPSSPDTSGIPV  E+L+KVMEWVSK+EDPI GELLPDASQTA+E++AKGLFKD FTAALLNGIEPEDGGGVGTPFES+G GDCLLNSVAA FAK+GG+GVRSAVKT+AVKLRLSVVL+GL YM +FLLEQDD  G          +   + G  WH  P
Sbjct:    1 MLDFVLHPSSPDTSGIPVGGEKLRKVMEWVSKREDPIVGELLPDASQTAEEVVAKGLFKDKFTAALLNGIEPEDGGGVGTPFESDGKGDCLLNSVAAFFAKDGGQGVRSAVKTIAVKLRLSVVLFGLIYMGLFLLEQDDISGHGTTTRRMCGKGWRRTGGMWHPTP 166
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BLAST of Ec-00_004420.1 vs. uniprot
Match: D7G3L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L3_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.240e-61
Identity = 99/105 (94.29%), Postives = 99/105 (94.29%), Query Frame = 1 
Query:   43 MLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDPIDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEGNGDCLLNSVAALFAKEGGR 357
            MLDFVLHPSSPDTSGIPVEDERLQKV EWVSKQEDPIDGELLPDASQTAKELLAKGLFK  FTAALLNGIEPEDGGGVGTPFE EGNGD LLNSVAA FAKEGGR
Sbjct:    1 MLDFVLHPSSPDTSGIPVEDERLQKVTEWVSKQEDPIDGELLPDASQTAKELLAKGLFKVKFTAALLNGIEPEDGGGVGTPFEREGNGDYLLNSVAAFFAKEGGR 105
The following BLAST results are available for this feature:
BLAST of Ec-00_004420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ28_ECTSI1.170e-150100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWX9_ECTSI1.100e-12796.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9T1_9PHAE1.950e-11486.11SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KLL4_9PHAE2.740e-11185.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV0_9PHAE4.410e-11180.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB76_9PHAE3.850e-10186.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K057_9PHAE2.850e-9680.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY21_9PHAE7.960e-8565.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP53_9PHAE1.490e-7774.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3L3_ECTSI1.240e-6194.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:5915050..5919569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2358
Hectar predicted targeting categoryother localisation
Gene idEc-00_004420.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_004420Ec-00_004420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 5915050..5919569 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004420.1Ec-00_004420.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 5915050..5919569 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004420.1.6Ec-00_004420.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5915050..5915895 -
Ec-00_004420.1.5Ec-00_004420.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5916247..5916789 -
Ec-00_004420.1.4Ec-00_004420.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5917410..5917469 -
Ec-00_004420.1.3Ec-00_004420.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5917677..5917959 -
Ec-00_004420.1.2Ec-00_004420.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5918501..5918943 -
Ec-00_004420.1.1Ec-00_004420.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 5919387..5919569 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_004420.1CDS:Ec-00_004420.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 5915050..5915895 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_004420.1 ID=Ec-00_004420.1|Name=Ec-00_004420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=211bp
MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDP
IDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEG
NGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLE
QDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQL
RSIAKPGAWL*
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spliced messenger RNA

>Ec-00_004420.1 ID=Ec-00_004420.1|Name=Ec-00_004420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2358bp|location=Sequence derived from alignment at chr_00:5915050..5919569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAACTCTCAGCTTCAGGCGCTGGCAAAGGTCCGTGGGATGCTAGA
CTTTGTCCTCCACCCGTCTTCTCCTGACACGAGTGGCATACCTGTCGAAG
ATGAGAGGCTGCAGAAGGTGATGGAGTGGGTGTCCAAGCAGGAAGATCCC
ATTGACGGCGAACTGCTGCCAGATGCATCCCAGACCGCAAAGGAGCTTCT
GGCGAAGGGCCTGTTTAAGGACAACTTCACCGCGGCTCTCCTTAACGGGA
TTGAACCCGAAGATGGTGGGGGCGTGGGCACTCCGTTCGAGAGCGAGGGC
AACGGCGACTGCTTGTTGAATTCAGTGGCGGCATTATTTGCCAAGGAGGG
AGGTCGAGGAGTCAGAAGTGCTGTCAAGACAATGGCGGTGAAGCTTCGAC
TCAGCGTCGTGCTGTACGGGCTGAAGTACATGGAGATATTTCTGCTGGAG
CAGGATGACCATTTTGGGGCATGGTACAACTACACGTCGGATGTGCGGGA
AAGGCTGGAGAAGAACGGGTGGCATGTGGTGCCCGACGTCGACAACAACT
GGCACGTCGGGTCGTCAAACTGCGCGCGGCTGATGTTCCTTGCGCAGCTG
CGGAGCATAGCAAAGCCTGGGGCATGCTCCAGTTATCTCCCGCCCTTCGA
CAATGCGACTGGATACCTCGAGTACGTGGAAAACCAGCTTCCCGAGCTAA
ACCACTTTTTTACCGTGTCTAGTGACACCGCCATCGTCGCGAAGGACCGC
GTTTTAACGAAATTCAGGACGTTGAAGAGTAAAGCCAAGGAGGCGGTCAC
GGCCTCAAAGCGGCAGGTACACGACGCTATGCTTGGCCCAGAACTGAACG
AATTGACGGCGGACGAGGAGGAGGACGTCCACCGCAGGCTGACGGACGCC
CATACAAGGGCTGAATCCCACTTCGAGAGGTGCGATGCTGACTTGAAACG
CATCATGGGCTATCATGTGAATGAGGCGAGAGAAGAAGCACAGCGGAAAG
CGGCCGCCGCTGCCGAGGAGGCCAGGTCCCGTGACGAGCAACGAAAAAAC
GGGAGCACCAGTAACGTGGACGGAGGCGAGGACAGCGCGAGCAAGGAAAC
GAAGCCCGCGAACGGACAAGAGTCGGAAGGAAAACAAGACCAGGGAAGGG
GAGGGAAGAAAAAGGGCGGGGACGGAGGAAAGACTGGAGGTAAAGGGGAT
GCCAAGGCGGGTGTCGATTCCGCGAACGGGAAGGAGGCAGAGGGTCCGCA
GGGCGAGGGAAGGGGAGGGATGAAAAAGGGTGGGGACGGAGGAAAGAGTG
GTGGCAAAGAGGATAAGAAGGCGCGCGTCGATCCCGCGAACGGGCGCAAG
GCGGAGGGAAAGCAGGGCAAGGGAAGGGGAGGGAAGAAAAAGGGTGGGGA
CGGAGGAAAGAGTGGTGGCAAAGGGGATGGCACGGCGGGTGTCAATTCCG
CGAACGGGCAGGAGGCGGAGGGAAAGCAGGGCAACGGGTTTGACGGCAGC
ACCGCCCCCAAGGGGTGCTTGGACTTCGTACTCGGCAATCGCCTTCACAA
TGGTCGTTGGAATGTGAAGCAGCCAGGGTACGGAACTGTGATGAAGGTTA
ACATGGGTGTCGACCAAAAAGAAGTTGAGTCGCACGACGTGCTAATGGAC
GACGCCGAGAGCATCGTTACGATGGTGGCGCGGTATGTGGAGGTAGACGT
CAAGTATGCCCGAACGCATGTTGCATCGGGGAAAGGGTCACCTGCAGGAG
AGAGAAGGAGATCCGACAATGAATTGGTCTCACCTGAGAACAGTTCGAAG
GAGGAGGAAGATACCCAGATACCCGTGGCAACAAACAATGGCGGTACGTG
TACAGGAGAGGGTGTCGACAGGAGTAGAAAAAATGGACAAGACGACAAGC
TATGCGGGACAAGGGGGATGGTATCCGTGAAGAAAGAAGGGGGTCAGAGT
CGCAAAAACGGAGATAAAGGCAAAAAGAAGGGAAATAGTGATGATGAGGA
AAGCGACAGCAGCACAGATGTCGAGATGGGATCGGACAAGAAGGGTGGGC
AGCGATCCAAAGCCGGAGTCGGAGGGCGATACAAGGACACGGGTGATGAT
GAGGAAAGCGACAGCAGTACAGACGCGGAGATTCAATCGGATAATAAGGG
TAGGCAGGGTTCTAAAGCCGGAGCCGGAGGGCGATCCAGGGGAAAGAGTG
ATGATGAGGGAAGCGACAGCGGTTCAGATGGGGGCAATGACTCCGGGAGG
GAGTACAGCGAAGGAAGTGGGGATGGTTCGGACAGTGACAACAGTGACGC
CTCGCAGGAGATGAGAGAAAGGCGGGCAAAACAACGGAAGCGCAACAGAC
GGCGATGA
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protein sequence of Ec-00_004420.1

>Ec-00_004420.1 ID=Ec-00_004420.1|Name=Ec-00_004420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=211bp
MANSQLQALAKVRGMLDFVLHPSSPDTSGIPVEDERLQKVMEWVSKQEDP
IDGELLPDASQTAKELLAKGLFKDNFTAALLNGIEPEDGGGVGTPFESEG
NGDCLLNSVAALFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLE
QDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCARLMFLAQL
RSIAKPGAWL*
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mRNA from alignment at chr_00:5915050..5919569-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_004420.1 ID=Ec-00_004420.1|Name=Ec-00_004420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4520bp|location=Sequence derived from alignment at chr_00:5915050..5919569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGAACTCTCAGCTTCAGGCGCTGGCAAAGGTCCGTGGGATGCTAGA
CTTTGTCCTCCACCCGTCTTCTCCTGACACGAGTGGCATACCTGTCGAAG
ATGAGAGGCTGCAGAAGGTGATGGAGTGGGTGTCCAAGCAGGAAGATCCC
ATTGACGGCGAACTGCTGCCAGATGCATCCCAGGTGTGTGCTTAAGGTCG
GGTCCATGATTGATGCTCCAGGCGCAATGATCGACGAAGGTTTTTGTTTT
TTTCACCAGACTGCAAACGGACCGCAAACGGACTGCAAAACCGCACTGCA
AAACATCTGCACGACGTTGTTGTATGGAGATGGGGTAGCAGCCTCGTATC
GGAAAGATTGAACTATGATCTGCTCGTAGCAGCATGGTTAATTCCATCTG
GTAGGTATATATTTTTTTGCTCTGTTGTGCCATTCGTGCTCCATACATAT
GTGTCGCTGGTTTCATGCGGAGAGTAGACAGGGTAAATGTAGGCATGGTG
AACTTAAATGTACGCTCTCCGTTTCATAATTAATTCATTATCAGCTTCAT
TATCATAATCTTTTCAACATTGACGATAAACTTGATCATTTATGGCCGCA
ATGTATCCTCCTCGATTCCCGTCCAGACCGCAAAGGAGCTTCTGGCGAAG
GGCCTGTTTAAGGACAACTTCACCGCGGCTCTCCTTAACGGGATTGAACC
CGAAGATGGTGGGGGCGTGGGCACTCCGTTCGAGAGCGAGGGCAACGGCG
ACTGCTTGTTGAATTCAGTGGCGGCATTATTTGCCAAGGAGGGAGGTCGA
GGAGTCAGAAGTGCTGTCAAGACAATGGCGGTGAAGCTTCGACTCAGCGT
CGTGCTGTACGGGCTGAAGTACATGGAGATATTTCTGCTGGAGCAGGATG
ACCATTTTGGGGCATGGTACAACTACACGTCGGATGTGCGGGAAAGGCTG
GAGAAGAACGGGTGGCATGTGGTGCCCGACGTCGACAACAACTGGCACGT
CGGGTCGTCAAACTGCGCGCGGCTGATGTTCCTTGCGCAGCTGCGGAGCA
TAGCAAAGCCTGGGGCATGGCTCTAACAGTTTGTCTTTCCGATACTCGCC
ACAGTCGTCCAATCTCCTCAGCGAGTGTTTCTGCCTTGTGAGTGTGTTAG
CTGGAAGGCTAGGCGCGTATAGAGTTATTTAGCACTTATTTTCACCGGTT
TGGTATCGAAGTAAGTCCATCCGAGGCAACAGCTCATCGCTTCCCCGCAG
CACGCAGCAACACTGGTCAGCTCAGGCAGTATAAACATGATCGTAGTACA
GTAGGATCGTTGTCCGTGCGTTGGGTGCCTGCCGATGACCCGCCCAGTTT
TCACGTACGAATTGGATGAGCTGCGCAATACCCGAAAGGGAAAGGAAAAC
GAAGGAAAACGGGTGGGGGACACGCTAACGACAATTCCGTGATGTCGTTT
TCGGAATGAATTTTGTGGCCGTCCCCACTCGCGCTCGGTCTGTTGCAGTC
AACACCCTCAACAATGCTCAGGGAGGACCTTGGAAGCACACGCTTTTTCT
GCCGGCGTGGGAAACGGGGCGCCACCCCACGCTCCACGCGGCCATGACCA
TGGGTTACAGCTCCAGTTATCTCCCGCCCTTCGACAATGCGACTGGATAC
CTCGAGTACGTGGAAAACCAGCTTCCCGAGCTAAACCACTTTTTTACCGT
GTCTAGTGACACCGCCATCGTCGCGAAGGACCGCGTTTTAACGAAATTCA
GGACGTTGAAGAGTAAAGCCAAGGAGGCGGTCACGGCCTCAAAGCGGCAG
GTACACGACGCTATGCTTGGCCCAGAACTGAACGAATTGACGGCGGACGA
GGAGGAGGACGTCCACCGCAGGCTGACGGACGCCCATACAAGGGTAAGGG
TTCGGAGCTTGTAAATAGGGTTAGTGATGAGGTTTTACCTTCGTTGGGGC
CACGCATATTTGACCACCTCCCTACCTCCCTGAGCTGTAGGACCCCGTAC
ACGATGATATTCCGTACGATTCAAAACGATATATGTGCCGAGACGTAACG
TGGTTGACGTCCACCGATTTGCTTTGCCTGTGTTCCATGCGAACCGACAG
GCTGAATCCCACTTCGAGAGGTGCGATGCTGACTTGAAACGCATCATGGG
CTATCATGTGGTAAGTGGTTGCAAGAATTCCGGTTAATGTGCGAGGGTAC
ACTGGTTGCTGGTCGGGCCATTGGGGGACTCTCCGTTAGCGTCTAGTACG
TTCGAATATTTGAGTAAGAGAAGCTCATCACAACCCTCGTTACGTTGCCC
CACCCCAAGCGTTCGCAGGGAACCCCAGACGCGTGTTCTGGTGCGTTGGA
CATTGTGACATCTTTGCCCTCGCCTCACCTCATCGTCATCCGATGTATAT
GCGTGTGTTGACAGAGACCGTTTGAGTGTGCGGAGCATGCCGCAGAAGCA
AACGAGGAGGCGTTCGATATCCGCGTGGTGAGCACGTCGAAATGCGGTGT
GGTGAATAAAATCTGAAGTAGACCTCCCCAACACTTGCAGAGCGGTTTCG
CAACATTTTCGTTTTCGCAAGTATGCGCATTACTTGGTGCGCGCAGCACG
CATCCTCGTGACGCATATCGGCGTATCTGCATCTGCTTCAAAACGTCGAC
CGTCTAGAAGCCACGATCAAACCACTAAGACTAGCAAACTCTTAGACCTT
GTCAACCCAGGCTCGTTGAGTGATTGAAGCTCCAAGTATATCGTGCTCTT
GTGCGACCAATGTCTTGTCGTGTACATCAGAATGAGGCGAGAGAAGAAGC
ACAGCGGAAAGCGGCCGCCGCTGCCGAGGAGGCCAGGTCCCGTGACGAGC
AACGAAAAAACGGGAGCACCAGTAACGTGGACGGAGGCGAGGACAGCGCG
AGCAAGGAAACGAAGCCCGCGAACGGACAAGAGTCGGAAGGAAAACAAGA
CCAGGGAAGGGGAGGGAAGAAAAAGGGCGGGGACGGAGGAAAGACTGGAG
GTAAAGGGGATGCCAAGGCGGGTGTCGATTCCGCGAACGGGAAGGAGGCA
GAGGGTCCGCAGGGCGAGGGAAGGGGAGGGATGAAAAAGGGTGGGGACGG
AGGAAAGAGTGGTGGCAAAGAGGATAAGAAGGCGCGCGTCGATCCCGCGA
ACGGGCGCAAGGCGGAGGGAAAGCAGGGCAAGGGAAGGGGAGGGAAGAAA
AAGGGTGGGGACGGAGGAAAGAGTGGTGGCAAAGGGGATGGCACGGCGGG
TGTCAATTCCGCGAACGGGCAGGAGGCGGAGGGAAAGCAGGGCAACGGGT
TTGACGGCAGCACCGCCCCCAAGGTGGGCAAGGATATGAATGGAGACAGG
GCGTTACCAAGCTGCGACGGAGGGCACATAAAATGTCGAAGAAAGCGCGG
CTTCAAGAAGAGAAGGAAAGGCATGCGTAGGTTATAATGCGGGTTTCTTT
GATGAGCCATGATTTATCATGTCCAACAGACGTAGCACAGACGGTGGTAT
GGGGACCAGCATAACCGGAACGAAAACGAAATCGCCTTGATTCTGAAGAC
GGCTCGAGTAGCTACAGCCTTGTCGCGTTTCGCCACCAGTACTTGTCGAA
AGAACCCACACCCGTTGCTACCCACACCCGTTGCTATAAAGTGTACCTTT
CGCGCTTCCCATGCGTTCGTGCAGGGGTGCTTGGACTTCGTACTCGGCAA
TCGCCTTCACAATGGTCGTTGGAATGTGAAGCAGCCAGGGTACGGAACTG
TGATGAAGGTTAACATGGGTGTCGACCAAAAAGAAGTTGAGTCGCACGAC
GTGCTAATGGACGACGCCGAGAGCATCGTTACGATGGTGGCGCGGTATGT
GGAGGTAGACGTCAAGTATGCCCGAACGCATGTTGCATCGGGGAAAGGGT
CACCTGCAGGAGAGAGAAGGAGATCCGACAATGAATTGGTCTCACCTGAG
AACAGTTCGAAGGAGGAGGAAGATACCCAGATACCCGTGGCAACAAACAA
TGGCGGTACGTGTACAGGAGAGGGTGTCGACAGGAGTAGAAAAAATGGAC
AAGACGACAAGCTATGCGGGACAAGGGGGATGGTATCCGTGAAGAAAGAA
GGGGGTCAGAGTCGCAAAAACGGAGATAAAGGCAAAAAGAAGGGAAATAG
TGATGATGAGGAAAGCGACAGCAGCACAGATGTCGAGATGGGATCGGACA
AGAAGGGTGGGCAGCGATCCAAAGCCGGAGTCGGAGGGCGATACAAGGAC
ACGGGTGATGATGAGGAAAGCGACAGCAGTACAGACGCGGAGATTCAATC
GGATAATAAGGGTAGGCAGGGTTCTAAAGCCGGAGCCGGAGGGCGATCCA
GGGGAAAGAGTGATGATGAGGGAAGCGACAGCGGTTCAGATGGGGGCAAT
GACTCCGGGAGGGAGTACAGCGAAGGAAGTGGGGATGGTTCGGACAGTGA
CAACAGTGACGCCTCGCAGGAGATGAGAGAAAGGCGGGCAAAACAACGGA
AGCGCAACAGACGGCGATGA
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Coding sequence (CDS) from alignment at chr_00:5915050..5919569-

>Ec-00_004420.1 ID=Ec-00_004420.1|Name=Ec-00_004420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2358bp|location=Sequence derived from alignment at chr_00:5915050..5919569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGAACTCTCAGCTTCAGGCGCTGGCAAAGGTCCGTGGGATGCTAGA
CTTTGTCCTCCACCCGTCTTCTCCTGACACGAGTGGCATACCTGTCGAAG
ATGAGAGGCTGCAGAAGGTGATGGAGTGGGTGTCCAAGCAGGAAGATCCC
ATTGACGGCGAACTGCTGCCAGATGCATCCCAGACCGCAAAGGAGCTTCT
GGCGAAGGGCCTGTTTAAGGACAACTTCACCGCGGCTCTCCTTAACGGGA
TTGAACCCGAAGATGGTGGGGGCGTGGGCACTCCGTTCGAGAGCGAGGGC
AACGGCGACTGCTTGTTGAATTCAGTGGCGGCATTATTTGCCAAGGAGGG
AGGTCGAGGAGTCAGAAGTGCTGTCAAGACAATGGCGGTGAAGCTTCGAC
TCAGCGTCGTGCTGTACGGGCTGAAGTACATGGAGATATTTCTGCTGGAG
CAGGATGACCATTTTGGGGCATGGTACAACTACACGTCGGATGTGCGGGA
AAGGCTGGAGAAGAACGGGTGGCATGTGGTGCCCGACGTCGACAACAACT
GGCACGTCGGGTCGTCAAACTGCGCGCGGCTGATGTTCCTTGCGCAGCTG
CGGAGCATAGCAAAGCCTGGGGCATGCTCCAGTTATCTCCCGCCCTTCGA
CAATGCGACTGGATACCTCGAGTACGTGGAAAACCAGCTTCCCGAGCTAA
ACCACTTTTTTACCGTGTCTAGTGACACCGCCATCGTCGCGAAGGACCGC
GTTTTAACGAAATTCAGGACGTTGAAGAGTAAAGCCAAGGAGGCGGTCAC
GGCCTCAAAGCGGCAGGTACACGACGCTATGCTTGGCCCAGAACTGAACG
AATTGACGGCGGACGAGGAGGAGGACGTCCACCGCAGGCTGACGGACGCC
CATACAAGGGCTGAATCCCACTTCGAGAGGTGCGATGCTGACTTGAAACG
CATCATGGGCTATCATGTGAATGAGGCGAGAGAAGAAGCACAGCGGAAAG
CGGCCGCCGCTGCCGAGGAGGCCAGGTCCCGTGACGAGCAACGAAAAAAC
GGGAGCACCAGTAACGTGGACGGAGGCGAGGACAGCGCGAGCAAGGAAAC
GAAGCCCGCGAACGGACAAGAGTCGGAAGGAAAACAAGACCAGGGAAGGG
GAGGGAAGAAAAAGGGCGGGGACGGAGGAAAGACTGGAGGTAAAGGGGAT
GCCAAGGCGGGTGTCGATTCCGCGAACGGGAAGGAGGCAGAGGGTCCGCA
GGGCGAGGGAAGGGGAGGGATGAAAAAGGGTGGGGACGGAGGAAAGAGTG
GTGGCAAAGAGGATAAGAAGGCGCGCGTCGATCCCGCGAACGGGCGCAAG
GCGGAGGGAAAGCAGGGCAAGGGAAGGGGAGGGAAGAAAAAGGGTGGGGA
CGGAGGAAAGAGTGGTGGCAAAGGGGATGGCACGGCGGGTGTCAATTCCG
CGAACGGGCAGGAGGCGGAGGGAAAGCAGGGCAACGGGTTTGACGGCAGC
ACCGCCCCCAAGGGGTGCTTGGACTTCGTACTCGGCAATCGCCTTCACAA
TGGTCGTTGGAATGTGAAGCAGCCAGGGTACGGAACTGTGATGAAGGTTA
ACATGGGTGTCGACCAAAAAGAAGTTGAGTCGCACGACGTGCTAATGGAC
GACGCCGAGAGCATCGTTACGATGGTGGCGCGGTATGTGGAGGTAGACGT
CAAGTATGCCCGAACGCATGTTGCATCGGGGAAAGGGTCACCTGCAGGAG
AGAGAAGGAGATCCGACAATGAATTGGTCTCACCTGAGAACAGTTCGAAG
GAGGAGGAAGATACCCAGATACCCGTGGCAACAAACAATGGCGGTACGTG
TACAGGAGAGGGTGTCGACAGGAGTAGAAAAAATGGACAAGACGACAAGC
TATGCGGGACAAGGGGGATGGTATCCGTGAAGAAAGAAGGGGGTCAGAGT
CGCAAAAACGGAGATAAAGGCAAAAAGAAGGGAAATAGTGATGATGAGGA
AAGCGACAGCAGCACAGATGTCGAGATGGGATCGGACAAGAAGGGTGGGC
AGCGATCCAAAGCCGGAGTCGGAGGGCGATACAAGGACACGGGTGATGAT
GAGGAAAGCGACAGCAGTACAGACGCGGAGATTCAATCGGATAATAAGGG
TAGGCAGGGTTCTAAAGCCGGAGCCGGAGGGCGATCCAGGGGAAAGAGTG
ATGATGAGGGAAGCGACAGCGGTTCAGATGGGGGCAATGACTCCGGGAGG
GAGTACAGCGAAGGAAGTGGGGATGGTTCGGACAGTGACAACAGTGACGC
CTCGCAGGAGATGAGAGAAAGGCGGGCAAAACAACGGAAGCGCAACAGAC
GGCGATGA
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Synonyms
The feature 'Ec-00_004420.1' has the following synonyms
Synonym
Esi0352_0026
Esi_0352_0026