Ec-00_004320.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004320.2
Unique Name	Ec-00_004320.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	233

Homology

[Close]

BLAST of Ec-00_004320.2 vs. uniprot
Match: D7FYH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH9_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 1.190e-167
Identity = 471/512 (91.99%), Postives = 472/512 (92.19%), Query Frame = 1

Query: 1405 KGQDGLGLDGARGGSSASVELLRSEVRVRHVGLVGAACSGAGDGEREPRAAGVEEVEPGPESYPVMQLQLCFSSGPKRLWWFPGSYTPGGGCISHNXXXXXXXXXXPRNDGERHRVRRDCRGGKSPTGGGRSSGVGEEVGGGARGDSTTGGCGTAGIGVRGTARGDRANDVVPLEWGDAPVELCPPEASAERECEPQLKVGTAHLLGINIALPPAPAPRLAPHXXXXXXXXXXXXXXXXXXXXXXXXXSSPHGTADAXXXXXXXXXXXXXXXDYGEGGEAGAGSRVRRGVDSLRRRTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAGWAWGLLRLWNRSGQRHDDDDHHRVGAACPGADGTATAEPPRDRRQETRQSSAXXXXXXXXXXXXXXXXXXXXHEVEHDYGDGRLGRARADRGRAREIPRDRGRDRAPAAA 2940
            +GQDGLGLDGARGGSSASVELLRSEVRVRHVGLVGAACSGAGDGEREPRAAGVEEVEPGPESYPVMQLQ                                        DGERHRVRRDCRGGKSPTGGGRSSGVGEEVGGGARGDSTTGGCGTAGIGVRGTARGDRANDVVPLEWGDAPVELCPPEASAERECEPQLKVGTAHLLGINIALPPAPAPRLAPHXXXXXXXXXXXXXXXXXXXXXXXXXSSPHGTADAXXXXXXXXXXXXXXXDYGEGGEAGAGSRVRRGVDSLRRRTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAGWAWGLLRLWNRSGQRHDDDDHHRVGAACPGADGTATAEPPRDRRQETRQSSAXXXXXXXXXXXXXXXXXXXXHEVEHDYGDGRLGRARADRGRAREIPRDRGRDRAPAAA
Sbjct:  432 RGQDGLGLDGARGGSSASVELLRSEVRVRHVGLVGAACSGAGDGEREPRAAGVEEVEPGPESYPVMQLQNIHED-----------------------------------DGERHRVRRDCRGGKSPTGGGRSSGVGEEVGGGARGDSTTGGCGTAGIGVRGTARGDRANDVVPLEWGDAPVELCPPEASAERECEPQLKVGTAHLLGINIALPPAPAPRLAPHXXXXXXXXXXXXXXXXXXXXXXXXXSSPHGTADAXXXXXXXXXXXXXXXDYGEGGEAGAGSRVRRGVDSLRRRTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAGWAWGLLRLWNRSGQRHDDDDHHRVGAACPGADGTATAEPPRDRRQETRQSSAXXXXXXXXXXXXXXXXXXXXHEVEHDYGDGRLGRARADRGRAREIPRDRGRDRAPAAA 908

[Close]

BLAST of Ec-00_004320.2 vs. uniprot
Match: A0A6H5KUM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM4_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 4.710e-121
Identity = 266/512 (51.95%), Postives = 280/512 (54.69%), Query Frame = 1

Query: 1405 KGQDGLGLDGARGGSSASVELLRSEVRVRHVGLVGAACSGAGDGEREPRAAGVEEVEPGPESYPVMQLQLCFSSGPKRLWWFPGSYTPGGGCISHNXXXXXXXXXXPRNDGERHRVRRDCRGGKSPTGGGRSSGVGEEVGGGARGDSTTGGCGTAGIGVRGTARGDRANDVVPLEWGDAPVELCPPEASAERECEPQLKVGTAHLLGINIALPPAPAPRLAPHXXXXXXXXXXXXXXXXXXXXXXXXXSSPHGTADAXXXXXXXXXXXXXXXDYGEGGEAGAGSRVRRGVDSLRRRTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAGWAWGLLRLWNRSGQRHDDDDHHRVGAACPGADGTATAEPPRDRRQETRQSSAXXXXXXXXXXXXXXXXXXXXHEVEHDYGDGRLGRARADRGRAREIPRDRGRDRAPAAA 2940
            +GQDGLGLD AR GSSASVELLRSEVRVRHVGLVGAAC+GAG+GER PRAAG EE EPGPES PVMQLQ                     G +                 GER R RRDCRGG+SPTGGGRSSGVGEEVGG ARGDSTTGGCG +G+G RG ARGDRA D+VP EWGDAPV LCPPEASAER C+  LKVGTAHLLG+NIALP APAPRL PH                         SSP+GTADA               DYGEGG AG G RVRRGVDS R  TGS                                                                                      XXXXXX       +KAGW WGLLRLWNRSGQRHD      VGAACPGADGT+TA PPRDRRQETRQSSA                    HEVEH YGDG LG ARADRG  R+I RDRGRDRAPAAA
Sbjct:  444 RGQDGLGLDEARSGSSASVELLRSEVRVRHVGLVGAACAGAGEGERAPRAAGDEEFEPGPESCPVMQLQNIH------------------GVV-----------------GERRRGRRDCRGGESPTGGGRSSGVGEEVGGSARGDSTTGGCGASGLGARGNARGDRAKDIVPSEWGDAPVGLCPPEASAERGCK--LKVGTAHLLGVNIALPAAPAPRLGPHHHPRPRRWRDATLEMASDTLPPPRNSSPYGTADATTTSPMPVSPSGSGSDYGEGGIAGEGGRVRRGVDSRRWWTGSVQEDEGRRSSSGKKRPRPEPVEEAVVAVPADRRGGGARGDEVEVGPRRVGEGRRREATAAATRADATTGERHPCPPGGGSDAPGDEXXXXXXERANKRRKKAGWGWGLLRLWNRSGQRHDXXXXXXVGAACPGADGTSTAVPPRDRRQETRQSSAKASCARTAERRSDEQRDQECHEVEHGYGDGLLGSARADRGWVRDISRDRGRDRAPAAA 918

The following BLAST results are available for this feature:

BLAST of Ec-00_004320.2 vs. uniprot

BLAST of Ec-00_004320.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYH9_ECTSI	1.190e-167	91.99	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KUM4_9PHAE	4.710e-121	51.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:5762519..5772152 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	4082
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004320.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320	Ec-00_004320	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 5762519..5772152 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320.2	Ec-00_004320.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 5764165..5765297 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320.2.9	Ec-00_004320.2.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5762519..5764603 -
Ec-00_004320.2.8	Ec-00_004320.2.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5765038..5765310 -
Ec-00_004320.2.7	Ec-00_004320.2.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5765749..5765856 -
Ec-00_004320.2.6	Ec-00_004320.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5766450..5766654 -
Ec-00_004320.2.5	Ec-00_004320.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5766867..5767601 -
Ec-00_004320.2.4	Ec-00_004320.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5767871..5768094 -
Ec-00_004320.2.3	Ec-00_004320.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5768805..5768891 -
Ec-00_004320.2.2	Ec-00_004320.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5770871..5771086 -
Ec-00_004320.2.1	Ec-00_004320.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5772004..5772152 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320	3UTR:Ec-00_004320.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 5762519..5764164 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320.2	CDS:Ec-00_004320.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 5764165..5764603 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004320	5UTR:Ec-00_004320.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 5765298..5765310 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:5762519..5772152-
coding sequence from alignment at chr_00:5762519..5772152-

mRNA sequence

>Ec-00_004320.2 ID=Ec-00_004320.2|Name=Ec-00_004320.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=233bp
MTGNGTASGETVAVARVPPAVAEAAGSERKWAGALVETLPPAGVVLRALV
SVVPLEGIEPTTLFLWNGEMRRWSSVRRKLPQRGSVSHSSKLAQPTSWGS
TLLSLRLQRLGLPPTITHGHGGGAMPLPKRRRTHRLRLAIVAHTEPQTQH
PHPQCRYHQAGQGLTTARVAKRGREAACGGASTLCGGGPARRRRRKGADR
LAARSGRGPSPAKKRWWLFQRTDEAAVAGATR*

spliced messenger RNA

>Ec-00_004320.2 ID=Ec-00_004320.2|Name=Ec-00_004320.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4082bp|location=Sequence derived from alignment at chr_00:5762519..5772152- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAACAGACAACAACAAACTGCAAACCGCAACATATTGCTGGAAGGGCGTG
TCACGCATCGCGTGTGGATACTTGTGTCGCTTCCTGTGCTCTGGTCTCCT
ATCCTTCTGTTGTGCACGAGAATCTCTTGTATCCGAGGATGACATTTCGG
ACGTGTGCCTGACACAGCAGTTGTTGGGAGGACTCCAAATGACGAAAGCC
CCCGCCGCGCCCGGCGACAGGAGTGGCGTCGGTAGCAGCGCCAGTGTCGT
GGGCCCTCCCCAGTCCCTTTCATTGGCTGATGAGGTGTACAACCTGTCGT
TGAAGCTGGCAGAGCTGAGGTGGCAGTCGGCGGGAAATGTCGACGCCTTG
CGATGTGTGGCGCAGGGTGTTCCCGAGCTTCAGCAGGCGTTCAGGCCGCT
GCATGCTGCGGTGGAAGCGGGCTTAGCCGAATGCCACCAGGCTAATCTAG
CGGCGGTTTTCGGCCGACGAGCAGCGACTCCGCGCGGTTTGCTTGGTACC
CTACCGCTCGGCGAGAACGGGCGCGGTGCTGTCGGCGCCGGCGGGAGGGA
ACGGGGCGGGGTTGGGGTTGGGGGCCGGACCGCAGCGGCGGCGCGGCACC
TAGCCGCGGCGCTGTCGGCGCTCGACGGAGACGTGCGCGCGGCGGCGCTG
CTGGCAAAGCAGGGCGAGAGCTTGAGGGCCATTGCCAAGTGGGCGGCGTG
GAAACCAGCGACGGCGAGCGCACCCGCTGCGCAGCCTCCCCTGGCGTCTG
CCCTGACCCTCTCGCGTCCGGAGCGTGCCGCACCGCCCGGCTCTGCCGCC
GCTGGCGGAGGCGGTAGCGGCGACCGTAGCTCGGCTGGGACCAGCAGCAG
CGAGGAGACCGGCGAAGGGTATGACGGTGACCCCCGCGAGGACTGGGCCA
TGAGAGTGTTCCGCGCACGCGGTGGCGAAAGCAGTTCCAATCCCCGCACC
GCCTCCGCCACCTCCGCCGCCGCCGCTGGTGCCGGCGCTCGGCCATCCTC
CAGCCTGGTCGTGGTCAAGGCCCTGAGGACAAATTTGCCGAAGGTCCCCT
GGCCGCCAGCACCGACGGCCTCGAACAACGGCGCCACCCCTACCGCAAGC
GATCGCGGAGGGCCGTCGGCGGTAGTATCGGCGGGAAAGGGCAGCGCTTG
GCGCGGCCCGCTGTCTTGGCTGACCGGGGGTCGCCGAGGCGCTGCCGCGG
CGCCCGGCGAGTCGGCGCGTCGCGCGGTCGCCCGGCCTCCGGCACCGTCG
CTCCCGGGGCCCCCAAGAGTCGTCGTGCGGGTTGTCTACTCTGCCCTCGC
GCAGGAAATGCTGCGGCTTGTAATGGAGTCGGAGCGGCGAGGGGTCGTCG
CGCCGGCAGCTGCTACTGTTGTCGATGCCGATGGCGGCCGAGACACCAGG
GCGGCGCAAAGGGGTCAGGACGGTCTAGGCCTCGACGGGGCTAGGGGCGG
TAGCAGCGCCTCGGTGGAGCTACTTCGGAGTGAGGTTCGGGTTCGACACG
TTGGCTTGGTGGGCGCCGCATGTTCTGGGGCCGGGGACGGGGAGAGGGAA
CCCCGTGCTGCTGGCGTTGAGGAGGTTGAGCCGGGGCCGGAGTCGTACCC
CGTCATGCAGCTGCAGGTTGTGCTTCAGCTCCGGACCAAAACGCCTATGG
TGGTTTCCCGGCTCCTACACACCGGGGGGGGGGTGTATCTCCCACAACCA
CCATCGCCACGGCCACGGCCACACAACATCCACGAAGATGACGGGGAACG
GCACCGCGTCAGGCGAGACTGTCGCGGTGGCAAGAGTCCCACCGGCGGTG
GCCGAAGCAGCGGGGTCGGAGAGGAAGTGGGCGGGGGCGCTCGTGGAGAC
TCTACCACCGGCGGGTGTGGTACTGCGGGCATTGGTGTCCGTGGTACCGC
TAGAGGGGATCGAGCCAACGACGTTGTTCCTTTGGAATGGGGAGATGCGC
CGGTGGAGCTCTGTCCGCCGGAAGCTTCCGCAGAGAGGGAGTGTGAGCCA
CAGCTCAAAGTTGGCACAGCCCACCTCCTGGGGATCAACATTGCTCTCCC
TCCGGCTCCAGCGCCTCGGCTTGCCCCCCACCATCACCCACGGCCACGGC
GGCGGCGCGATGCCGCTCCCGAAAAGGCGTCGGACACACCGCCTCCGCCT
CGCAATAGTAGCCCACACGGAACCGCAGACGCAACATCCACATCCCCAAT
GCCGGTATCACCAAGCGGGTCAGGGTCTGACTACGGCGAGGGTGGCGAAG
CGGGGGCGGGAAGCCGCGTGCGGCGGGGCGTCGACTCTCTGCGGCGGCGG
ACCGGCTCGGCGGAGGAGGAGGAAGGGCGCCGATCGTCTAGCGGCAAGAA
GCGGCCGAGGCCCGAGCCCGGCGAAGAAGCGGTGGTGGCTGTTCCAGCGG
ACCGACGAGGCGGCGGTGGCCGGGGCGACGAGGTAGTGGTGGACCCTCGA
CGGGTTGGAGACGGAGGGAGGCGCGGGGCGGCGGCGGCGGCGACCCCCGC
CGTTGCCGCCACCGGCGAACGCCACCCGTGCCCTCCCGGCGGTGGTAGTG
ATGAGCCAGACGACGAGGAGAGAAACGAGGAGGCAGAAAGAGCCAACAAG
AGGAGGAGGAAGGCCGGGTGGGCCTGGGGGCTTCTCCGCCTTTGGAATAG
ATCAGGACAGCGCCACGACGACGATGACCACCACCGCGTTGGCGCCGCTT
GCCCCGGTGCTGATGGGACCGCGACCGCCGAGCCTCCCCGAGACCGACGG
CAGGAAACCCGGCAGTCATCCGCGAAAGCTAGCAGCGCAAGAACAGCCGA
GAGACGCAGCGACGAGCAGCGGGACCAGGAGTGCCACGAGGTCGAGCACG
ACTACGGTGATGGGCGACTGGGGCGCGCCCGCGCGGACCGGGGGCGGGCC
AGAGAGATCCCGCGCGATCGGGGCAGGGACAGGGCTCCTGCTGCTGCGCC
GCCGAGGAGGTCACCGTTGGTCATTACCGTCGTCCTCACCCCACCGCCAC
CACCGCCGCCGCCGATGTCGCCTTCGTAGAGCTTGCCGTTCGTCGGCAGC
ACCTGCCCACGCGGCCGGTTTTTTATGTAGTGGTGTTGTCATGCATTCTG
GGTTTTTATGACTCGGGCCTTCGCTTCGGCCGCGCCGACTTTTGACGTAG
CTGTCGAGCGTTGCCTGCTCGCCGGAAGTGCCGACTACTGCTGTATCGAT
GCGGGGAGTCTCGTCGGAGAACCGCCGCCGCGGGCGGAAAGAACGAGATA
TGTGAATCGCGGGGCCTGCGGAGCTGAGAAGCTCACAACGTCTGGAAGAA
CGGCGTTCTTGGAGAATGGCTCTGAGCGAAATAGCTCTGAGCGAAATAGC
TCTCTCTCTCTCTTTCTCTCTCTGCGCGTGCAGATAGCTCTCAGCCTGTT
CAGGGGGCCTACGGCCAGCGTTGGTAGGCACGATGGGGCAGGTTTTCTTC
CAAGAACGCCGGGCAAGGGTGGGGGATAGGAGAGTACACGATGTGGGCGG
AGAACCCGTCGGTACATGGCTCGCAGCACAGAGGGGGGTGACTGAGGCGG
CGGAATATCTGTGAATACCGTCTGCAAGTGATGCTCAAGTCAAGGTCATG
GCTGTAGCATCTACATCAGGAGTGTTGGTATATGAAGGTGTCATGTGGTC
AGGAGGGGGGGGGGCAAGGAGGGTTGATTCGTGGTGCCACGAGAACCATT
TCGCCGAGAACGCGTTGACGTTGACAACAAAGTTGATCACCCAAAGTTGG
CGATTTGAATGAAACGCCTTTGTATGTCCGTGTTGTTCTTCTGTCGGGCA
ACCACGTATGTTGGTCGTTGGTCCTGTCTCTTGCTCCCATACCGATGTTA
CGCCCAAAAGAGAACCGGTCTCGACGTTTGCCTTTCGGATTTTTGCCGGT
GCCAAGATTTTTCACTTCGACGCCGAGAAGAAAACACCTTCGCGATGGTT
CCGGCGTGGTAATGTGTGGGTGTTTGGGTTATATCTGTGGTCTTGTGGGT
GCTGTGCTCCCCATGGTACAGTGGCAATCACACCGATACTCCGCTGTGGG
TCCGCGACGGAAAAGTGGAAGCCCCATTCGCG

protein sequence of Ec-00_004320.2

>Ec-00_004320.2 ID=Ec-00_004320.2|Name=Ec-00_004320.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=233bp
MTGNGTASGETVAVARVPPAVAEAAGSERKWAGALVETLPPAGVVLRALV
SVVPLEGIEPTTLFLWNGEMRRWSSVRRKLPQRGSVSHSSKLAQPTSWGS
TLLSLRLQRLGLPPTITHGHGGGAMPLPKRRRTHRLRLAIVAHTEPQTQH
PHPQCRYHQAGQGLTTARVAKRGREAACGGASTLCGGGPARRRRRKGADR
LAARSGRGPSPAKKRWWLFQRTDEAAVAGATR*

mRNA from alignment at chr_00:5762519..5772152-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004320.2 ID=Ec-00_004320.2|Name=Ec-00_004320.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9634bp|location=Sequence derived from alignment at chr_00:5762519..5772152- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAACAGACAACAACAAACTGCAAACCGCAACATATTGCTGGAAGGGCGTG
TCACGCATCGCGTGTGGATACTTGTGTCGCTTCCTGTGCTCTGGTCTCCT
ATCCTTCTGTTGTGCACGAGAATCTCTTGTATCCGAGGATGACATTTCGG
TGAGAACAGCAACGGTGTGAGGAAATTGGATGTAGCTTTGAATTTGAAAA
CAGTCGGGGTGCGATAGTAGACCGCGGTGACTACCGTCATTTCACCAATT
CGTGCGTGCTTCAGAGAGATAAGAGACAAAAGAGGCGGGGTGAGAGGGCT
GGTATCGAGGTTGCATGGGTGCCGCTGCACTATTTTGCGTGTAGTTGAGC
TTTTCGGGCCAACAAAATCTCCACACACCACATACGCAATATGTTAGATA
CAACAACAGTCAGAACTTCCTCCGCGCACCCCTGCCCTTGTAATTCCATT
ACACTATGTACCTTGATGGTATACACACAAGCAGTGAAAGTTAGCACTTG
ACTGCTGTCATGTACAGCAGTAGATGCACCGAGAACACAAACCTCGTTCA
TGCAACGATTGGTATGGTGAATAATGTATCTTCCCGAGATCGATCGACTA
CAGTACTGTATCTGGAAAAATTGGTACAACCGCACGTCGCGAGCATTTGT
CATGCTGTCATTCCTGCGCCAGACACACGGCGAGTGCGGGTCGAGGGGCC
TACACGCTAGTCCGTTACCAAATCACGACATATCTCTGCTGCAGTACCAC
CATCCGGTGGGAGAAGGAGCTTGACACGTGCGCAAGACACATAGCCGCCT
TGTTAGCTTCTGCTGTTCGGAACCTACATGTAAGAAACAGTAGTCGCCAC
GCACGCCAACCACGCCGTAGGCAAATGGGCCGTTCGTGAGTTACCCCTTG
TAATCACCGTGGCCGCCTGTCGAGAGTAGGCGTCTGCTGCTTGCCTGCCG
ACACTCCCCCTCCGCGGTACACTTGCTGTGACCATTCGACGTTTTTTACG
GGCTGCCTTCTTTGGAAACATTACCACAAAGATTTCCGTGTTCCGCGTCA
CGTCCTCCGGTTTCAGGACGTGTGCCTGACACAGCAGTTGTTGGGAGGAC
TCCAAATGACGAAAGCCCCCGCCGCGCCCGGCGACAGGAGTGGCGTCGGT
AGCAGCGCCAGTGTCGTGGGCCCTCCCCAGTCCCTTTCATTGGCTGATGA
GGTGTACAACCTGTCGTTGAAGCTGGCAGAGCTGAGGTGGCAGTCGGCGG
GAAATGTCGACGCCTTGCGATGTGTGGCGCAGGTGTGTTGGTGGTTGTTG
CTTGTGAGGTTGGCTTGAAGGCGTATGGTGCATCAGATTTCAATAGGGGA
TTCGCCTCTCTGTGCATAGCAGATGGTGCAGGCAAAGGGGGATCGGTTGC
TCTGCCGTGGACACGGCCCCTTCCTTCTGTGGCCCAGGTGAGCGTTTGGT
TGCATGGCTTGAGACTACAGAATCAGACCATTTTTTCAGGCTACATTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTCTTCACATTAA
ACTCGTGTCAGTTGCTAATCCCAAAATCTGGCAAAGACTCGGCCCGTGGT
CACAAAAATGCTAAAGCCATCGGAAGATCTAAAGAACACGCACACTATTA
GCAAGAAAAGGGTACACAAGCCCGAGGAGGTACACCTACAATCCCTGCAG
CACGTTTGCGTGCTCACAACTGAACTACACGCCCACACACTACAATTTGA
CTACAGCAGGCGGCATCACCCCCCCCCTTGTCCCGCACTTCACCAAAATG
AATGTTTGTCGACTACAGCGTACTGCTGTCTGAAGTGCTGTCTGTACAAA
AATAACACCATGGTGTATGGTGCACAACAAGCTCGGGGCATGCAGCTGCT
GTCTGAAGTGCTGTCAGAATGGGCCCGTGGACATACAATGAAGAAGAACA
ACCAACCAAAGCCATCATTGCAATTGACAATCGCCCGAATCTATCCAGAT
CATCTGTGTTAGACACAGCAGTGTAAACATCGACACTGACTAGGAATCGT
TCCACATTGAAGGGGTCTTCCACGATGCAGGTACACAATTAAGGCACCCG
GGTTATCCGCGCCATCTCTGCCGCGTCTCTCTACAAAACCAGTGACGTCA
TTACACACACCTAACACCTATATTCAGGAAAAAAAAAACGGAAAATAATT
GACAACACAAGAAGAGATGTTTGTCCGTGCGACACGGTTCGATGCCGTCC
GCATGCTCCGGTTCCGCTCTGCTCCGGTGCCGCTGCTCCGGTGCCGCTTC
TCCGGTGTCGCTGTGGCCAATCCTAGCACGACCAAACTCGACCCGCTCCG
CTTCGTACACGCTCTCGTTGCTGTCCTTCCCAGTCGGTTCCTCGCTTTCT
CCCTCGTTGCACTTAGGGTTCTTGGTCTGAAAATTCTCGCGCCGAAGGGT
CAACCAGCCCAGTCAGCTCGTCACCACCTGTCCCCTCCTCATTTCATGGC
AAAACCAGGTTACTGAGACAGTACAGCTCCCTCTAGCAAGCATAGGGCCG
TGTACATAGTGCCCGTCCACCTTTCTGATGGCGTCTGCCTCCGCGCACAA
AGATGAGATGGGCATTGCTGCCTGCACCGACGGCCTCGAGGCCCGCGCAT
CTGCACCTTTGTACCTGACGCACCAGTGCCGACCCAACTCCACCACTGCG
CACGCCTCGCGGCGGGTGCGCCGTAGCAAGAAGGTATCGGTCCCTTGAGG
GTGAGTCTAGCCCTGCTCGCTAGAAAGACCCCCCCCCTCGCTTTGGGTCA
TGCCTAAGCAAAACCTTGCCGAGGCAGCGAGGGGAAGAAGGAACATGGAA
ACCCTCGATATTTGTACCTTGATAACACGGATTTGGGCGACGAACGTGCA
TTGTGCTGCGAGGCGCAGTGTGTCTTGCCGAGGCGTAACGTTTCCTCAAG
GACCAGCGGGAGTAATGTGTTACTTGACCAGAACGCGTTGGGGTGATGTC
GGGACAGCGGTAAATTTATTGAGGCATAGCGTCGACGCCCTGCGTACCCT
CCCATGGCTCAGGCTGAAACTTGTGGGCTTTATTTTTGTTGGTCAAGTGT
TTCGAACTTTTTTGTTCGTTAACGTCGCGTCAAGTCATATTCATTGTTTT
TCAGCAGCTCTACAACCCCAAGGAGAGTACAAGTGGTACGGAATGACAAC
GTAATGCCCCCATTGCCCTCCCCGCCCGCTGATTCGCATATCCCGGTATG
GCTACAAATAGGGTGTTCCCGAGCTTCAGCAGGCGTTCAGGCCGCTGCAT
GCTGCGGTGGAAGCGGGCTTAGCCGAATGCCACCAGGCTAATCTAGCGGT
GAGCTAGACTTGTTCCGCAAGATGGAGTGTATTGTGTCCGCAAGTAGCTA
GTGAGAGCCGAGACCGTTGTGGACGGAAGAAACAGCGCCGACTATGCAGT
GGTATATGCACTGGTCTCTCGAAAAACATGGTATCACTGGCCGAATAGGC
ACGTTTGACGGGCGGTTGGCACGGTCAAATTATTGCAAGCGTAGCGAACA
CGAACGTTGGTGTTGTTGTTAGTGGTCTAGATCCGAGCGCCGAACCCGCA
TTCTTGATATTTTTAAGGCCGATCCCTTCGGTTTCTCCCATATCTGGGGC
ATCTGCGGGTCAGAGGCTTTTTGGCGTTTCATGCCCCGTCGAGACTGATG
TCCTTTCATGAGTCCGCCGGTGTTGGCACTATTGATAGCAGCTTCAAGAT
GCCAGATTACCATCAACCCCGCAACCACTTTTGCCGCCGCCATCGATGAA
GAAGATGCGGACTTTTTGCGGCTCCTGTGTTTGGTCGAGCTAGTAGCTCG
CCGCCCATTCATGCGTTGCTCTATTCTTCCTCACAAGGAGGCGCCGCTGC
ACGGCATCAATACGGCAAGGTTTAGCCCCGACTCGGAGAGCGAAGAGACA
CCATTCAATGAGTCCGCTGAAGCTTCGCCGTGCTTTAGAATAGGGGTAGT
AGTGCCGCGAGAGCACGGCCATGACTTGCCGGTGTGTTCGGTGTGTGCCG
TGACTCAGGCGGTTTTCGGCCGACGAGCAGCGACTCCGCGCGGTTTGCTT
GGTACCCTACCGCTCGGCGAGAACGGGCGCGGTGCTGTCGGCGCCGGCGG
GAGGGAACGGGGCGGGGTTGGGGTTGGGGGCCGGACCGCAGCGGCGGCGC
GGCACCTAGCCGCGGCGCTGTCGGCGCTCGACGGAGACGTGCGCGCGGCG
GCGCTGCTGGCAAAGCAGGGCGAGAGCTTGAGGTACCTCAGCGTCATCGT
CGTTGTTGTGTTTGTTGTCAGATGCCCTCAGCGACTTTTTGCGGTCAATC
CTTCCTTGCTTTCCACCTGACCAGTCGTTCCCGATGTCAGCCAGTTCGTC
CCCCTCCCCGCCCACGTTTGTCAGGAACTGCCGTATCTCCAAAATAGCGA
CATGCAACAAGGCACCAAAACCCAACCAACCAAGCAAATATTGGTCAAGC
GCTTGTGTGTGTGTGTGTGTGTGTTGTGTTGGCCTTCTCCCCGTATCCCA
GGGCCATTGCCAAGTGGGCGGCGTGGAAACCAGCGACGGCGAGCGCACCC
GCTGCGCAGCCTCCCCTGGCGTCTGCCCTGACCCTCTCGCGTCCGGAGCG
TGCCGCACCGCCCGGCTCTGCCGCCGCTGGCGGAGGCGGTAGCGGCGACC
GTAGCTCGGCTGGGACCAGCAGCAGCGAGGAGACCGGCGAAGGGTATGAC
GGTGACCCCCGCGAGGACTGGGCCATGAGAGTGTTCCGCGCACGCGGTGG
CGAAAGCAGTTCCAATCCCCGCACCGCCTCCGCCACCTCCGCCGCCGCCG
CTGGTGCCGGCGCTCGGCCATCCTCCAGCCTGGTCGTGGTCAAGGCCCTG
AGGACAAATTTGCCGAAGGTCCCCTGGCCGCCAGCACCGACGGCCTCGAA
CAACGGCGCCACCCCTACCGCAAGCGATCGCGGAGGGCCGTCGGCGGTAG
TATCGGCGGGAAAGGGCAGCGCTTGGCGCGGCCCGCTGTCTTGGCTGACC
GGGGGTCGCCGAGGCGCTGCCGCGGCGCCCGGCGAGTCGGCGCGTCGCGC
GGTCGCCCGGCCTCCGGCACCGTCGCTCCCGGGGCCCCCAAGAGTCGTCG
TGCGGGTTGTCTACTCTGCCCTCGCGCAGGAAATGCTGCGGCTTGTAATG
GAGTCGGAGCGGCGAGGGGTCGTCGCGCCGGCAGCTGCTACTGTTGTCGA
TGCCGATGGCGGCCGAGACACCAGGGCGGCGCAAAGGTAGACCCTTGGTC
GCGTTCTTGCCTCGAAAAAATGTCGTCCTGGGTCTGTTTTTGTCCGGTGT
ACGTCGCGGTTGTCGCGGAGGGACCACCTTTTTTTTCCCGATACCCCCCC
CCGTGGCCGGCTTCTCGCGATGATGATGCAACAGAGGCTATCCGTGAGCT
ATCATCCTCCCGTGTGTGCTGCTTTTGCCTACCGCTACCGAACGCCAGGG
GTCAGGACGGTCTAGGCCTCGACGGGGCTAGGGGCGGTAGCAGCGCCTCG
GTGGAGCTACTTCGGAGTGAGGTTCGGGTTCGACACGTTGGCTTGGTGGG
CGCCGCATGTTCTGGGGCCGGGGACGGGGAGAGGGAACCCCGTGCTGCTG
GCGTTGAGGAGGTTGAGCCGGGGCCGGAGTCGTACCCCGTCATGCAGCTG
CAGGTGACGGGGCGACGTTTCTGTTGGGCATCGGTGGTCGTGCCCAGTTG
TTGAGACGCAGAACCGTTGTACAGATTTTGTTTGTGGTTGTCCGGTTGGT
TGAGAGAGGCTGGTCGAGTTCCACTTTCGGGCCTTTATTGTGTTGGTAGC
TCGTCGTTGTTGAACACATACACTCTTGCTAGCTAGTTAGGGCGCACGTT
TGGCGCTCCCTACCCACTGTGTCAAAGTTGGCTTGCTTTTCTCTTTTGCC
CTGGTTGCGGGTTTTGTAACTCATAGGGCTAGTTTGCGGGGTCTCGAGGT
TGTTGTTGGCGTTGGAGTCAACCTTGAGTCGACGTGCAAAAGGACTGGGG
AAATCACACGACCAAACGAACGGCTCGTGACAAACTTTCTGTAGTGTATT
GCGACCCATAGCACAACTTCCGGGAGGTTTGTGAGGTTATGAGGAAACGT
GCAGAACAAGACCATCCCCACGTCCACTACCCACCATCCGGTTGTCCCCC
ACGCTGCTTGCTCTCTACCGGAAGTCTCATGCCAATGTGTTTTTTTATTT
CGCCTCTGTTGCTATTGGTCCTCGCCCTCCGAACGTGTTGGAGCAGGTTG
TGCTTCAGCTCCGGACCAAAACGCCTATGGTGGTTTCCCGGCTCCTACAC
ACCGGGGGGGGGGTGTATCTCCCACAACCACCATCGCCACGGCCACGGCC
ACACGTAAGCCCACCCTCGTTCACTCGGTTGCCTCAAAAAGCGGCGAGGT
TCCTCCACCCGATCCGCTTCTTGGTTGTCAGCATCGGTGTCCACCCATTG
CTGCAGGGGGGGGGGCGAGCGGCTTGTGTTGGCTCGCTTGCTTGTACAGC
AGTTGGTCCCTTTTGCGGTCTACTTTTTCAGCAGTGGCATGCATCTCTTC
GGAAACGGAGATTTTTTCTGTCTCCCTTCTCGCGCGCGGGATGCTTCTTG
CTTTCTGCTCGAAGGGGCAGAAACGTTTTTCGCTCTCGTGCCTCGTACCC
TCAGAAGTCTAGTACAGTACTTCGTACTTGGAAGGACAGAATGGCCTCGT
GTACTTGCTGAGCAACCAACCACTTGCTTGCGCACGCTCCTTCCCCCGTT
CGGAACACAATACATGTTGGTGGTGGTATTATCCCCTCACAGAACATCCA
CGAAGATGACGGGGAACGGCACCGCGTCAGGCGAGACTGTCGCGGTGGCA
AGAGTCCCACCGGCGGTGGCCGAAGCAGCGGGGTCGGAGAGGAAGTGGGC
GGGGGCGCTCGTGGAGACTCTACCACCGGCGGGTGTGGTACTGCGGGCAT
TGGTGTCCGTGGTACCGCTAGAGGGGATCGAGCCAACGACGTTGTTCCTT
TGGAATGGGGAGATGCGCCGGTGGAGCTCTGTCCGCCGGAAGCTTCCGCA
GAGAGGGAGTGTGAGGTGAGCCGTATGGAGCGGGAAGGCTAGGGTTGAGA
CGTGTTTTTTTCTGGGGGGCGGGGGGGCACAGCTTTTCGAAATTTTGATC
CTGCGTCAATGTTCGGTGCTTGTGTCCCGTTGAAGAACAAATGTCCGCGA
TCACTTCGTACAGTAGTCTCGTAGCTTCGGCCCCTAATTAACGACCCACT
GCGAGTGTAGGGAACGGAACGCGATGTAGCACCGCATCTTCCGCTTTCCC
AGTGCCACGCCCAGTAGGGGAGAAATCGTAGACCACGGTGGTGGCTCTGG
CACGCAGCTTCCGCCTGCGCTCCATGACAAACACACACCGACGCTATATA
GAACGTTTCCGCTGCCTCGGCCAGTAAGTGGGAACTGGTGACCATCGACG
CATTTTTCTCGCCCCCCCCGACCTTCCCCCGCTCTCTCGACGGTGTCAGC
CACAGCTCAAAGTTGGCACAGCCCACCTCCTGGGGATCAACATTGCTCTC
CCTCCGGCTCCAGCGCCTCGGCTTGCCCCCCACCATCACCCACGGCCACG
GCGGCGGCGCGATGCCGCTCCCGAAAAGGCGTCGGACACACCGCCTCCGC
CTCGCAATAGTAGCCCACACGGAACCGCAGACGCAACATCCACATCCCCA
ATGCCGGTATCACCAAGCGGGTCAGGGTCTGACTACGGCGAGGGTGGCGA
AGCGGGGGCGGGAAGCCGCGTGCGGCGGGGCGTCGACTCTCTGCGGCGGC
GGACCGGCTCGGCGGAGGAGGAGGAAGGGCGCCGATCGTCTAGCGGCAAG
AAGCGGCCGAGGCCCGAGCCCGGCGAAGAAGCGGTGGTGGCTGTTCCAGC
GGACCGACGAGGCGGCGGTGGCCGGGGCGACGAGGTAGTGGTGGACCCTC
GACGGGTTGGAGACGGAGGGAGGCGCGGGGCGGCGGCGGCGGCGACCCCC
GCCGTTGCCGCCACCGGCGAACGCCACCCGTGCCCTCCCGGCGGTGGTAG
TGATGAGCCAGACGACGAGGAGAGAAACGAGGAGGCAGAAAGAGCCAACA
AGAGGAGGAGGAAGGCCGGGTGGGCCTGGGGGCTTCTCCGCCTTTGGAAT
AGATCAGGACAGCGCCACGACGACGATGACCACCACCGCGTTGGCGCCGC
TTGCCCCGGTGCTGATGGGACCGCGACCGCCGAGCCTCCCCGAGACCGAC
GGCAGGAAACCCGGCAGTCATCCGCGAAAGCTAGCAGCGCAAGAACAGCC
GAGAGACGCAGCGACGAGCAGCGGGACCAGGAGTGCCACGAGGTCGAGCA
CGACTACGGTGATGGGCGACTGGGGCGCGCCCGCGCGGACCGGGGGCGGG
CCAGAGAGATCCCGCGCGATCGGGGCAGGGACAGGGCTCCTGCTGCTGCG
CCGCCGAGGAGGTCACCGTTGGTCATTACCGTCGTCCTCACCCCACCGCC
ACCACCGCCGCCGCCGATGTCGCCTTCGTAGAGCTTGCCGTTCGTCGGCA
GCACCTGCCCACGCGGCCGGTTTTTTATGTAGTGGTGTTGTCATGCATTC
TGGGTTTTTATGACTCGGGCCTTCGCTTCGGCCGCGCCGACTTTTGACGT
AGCTGTCGAGCGTTGCCTGCTCGCCGGAAGTGCCGACTACTGCTGTATCG
ATGCGGGGAGTCTCGTCGGAGAACCGCCGCCGCGGGCGGAAAGAACGAGA
TATGTGAATCGCGGGGCCTGCGGAGCTGAGAAGCTCACAACGTCTGGAAG
AACGGCGTTCTTGGAGAATGGCTCTGAGCGAAATAGCTCTGAGCGAAATA
GCTCTCTCTCTCTCTTTCTCTCTCTGCGCGTGCAGATAGCTCTCAGCCTG
TTCAGGGGGCCTACGGCCAGCGTTGGTAGGCACGATGGGGCAGGTTTTCT
TCCAAGAACGCCGGGCAAGGGTGGGGGATAGGAGAGTACACGATGTGGGC
GGAGAACCCGTCGGTACATGGCTCGCAGCACAGAGGGGGGTGACTGAGGC
GGCGGAATATCTGTGAATACCGTCTGCAAGTGATGCTCAAGTCAAGGTCA
TGGCTGTAGCATCTACATCAGGAGTGTTGGTATATGAAGGTGTCATGTGG
TCAGGAGGGGGGGGGGCAAGGAGGGTTGATTCGTGGTGCCACGAGAACCA
TTTCGCCGAGAACGCGTTGACGTTGACAACAAAGTTGATCACCCAAAGTT
GGCGATTTGAATGAAACGCCTTTGTATGTCCGTGTTGTTCTTCTGTCGGG
CAACCACGTATGTTGGTCGTTGGTCCTGTCTCTTGCTCCCATACCGATGT
TACGCCCAAAAGAGAACCGGTCTCGACGTTTGCCTTTCGGATTTTTGCCG
GTGCCAAGATTTTTCACTTCGACGCCGAGAAGAAAACACCTTCGCGATGG
TTCCGGCGTGGTAATGTGTGGGTGTTTGGGTTATATCTGTGGTCTTGTGG
GTGCTGTGCTCCCCATGGTACAGTGGCAATCACACCGATACTCCGCTGTG
GGTCCGCGACGGAAAAGTGGAAGCCCCATTCGCG

Coding sequence (CDS) from alignment at chr_00:5762519..5772152-

>Ec-00_004320.2 ID=Ec-00_004320.2|Name=Ec-00_004320.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=699bp|location=Sequence derived from alignment at chr_00:5762519..5772152- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGGGGAACGGCACCGCGTCAGGCGAGACTGTCGCGGTGGCAAGAGT
CCCACCGGCGGTGGCCGAAGCAGCGGGGTCGGAGAGGAAGTGGGCGGGGG
CGCTCGTGGAGACTCTACCACCGGCGGGTGTGGTACTGCGGGCATTGGTG
TCCGTGGTACCGCTAGAGGGGATCGAGCCAACGACGTTGTTCCTTTGGAA
TGGGGAGATGCGCCGGTGGAGCTCTGTCCGCCGGAAGCTTCCGCAGAGAG
GGAGTGTGAGCCACAGCTCAAAGTTGGCACAGCCCACCTCCTGGGGATCA
ACATTGCTCTCCCTCCGGCTCCAGCGCCTCGGCTTGCCCCCCACCATCAC
CCACGGCCACGGCGGCGGCGCGATGCCGCTCCCGAAAAGGCGTCGGACAC
ACCGCCTCCGCCTCGCAATAGTAGCCCACACGGAACCGCAGACGCAACAT
CCACATCCCCAATGCCGGTATCACCAAGCGGGTCAGGGTCTGACTACGGC
GAGGGTGGCGAAGCGGGGGCGGGAAGCCGCGTGCGGCGGGGCGTCGACTC
TCTGCGGCGGCGGACCGGCTCGGCGGAGGAGGAGGAAGGGCGCCGATCGT
CTAGCGGCAAGAAGCGGCCGAGGCCCGAGCCCGGCGAAGAAGCGGTGGTG
GCTGTTCCAGCGGACCGACGAGGCGGCGGTGGCCGGGGCGACGAGGTAG

Synonyms

The feature 'Ec-00_004320.2' has the following synonyms


Synonym
Esi0344_0030
Esi_0344_0030