Ec-00_004090.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004090.1
Unique Name	Ec-00_004090.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	176

Homology

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BLAST of Ec-00_004090.1 vs. uniprot
Match: D7FXD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD1_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 1.870e-123
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVNYIVYSN 525
            MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVNYIVYSN
Sbjct:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVNYIVYSN 175

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BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.220e-65
Identity = 102/167 (61.08%), Postives = 129/167 (77.25%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M  Q DDDTGG+LGN R+DI+ +RRT+GQ+ DG ++L  L D P EQ R+S +LGL     +G  LPL+T++ I P  ++P+ERLHFDALG  Q  QVF LE+LST GRRLV ++MAQ PSLLYPPGT  LKD+VTNY+SL GSDKWTLQS++LL+FR VLQDV ++
Sbjct:   29 MVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSDLDALADVPREQDRRSRDLGLVPPDPSGLPLPLYTAMRIVPTENVPVERLHFDALGQSQFCQVFYLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAM 195

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BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.390e-65
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M  Q DDDTGG+LGN R+DI+ +RRT+GQ+ DG +EL  L D P EQ R+S +LGL    A+G  LPL+T++ I P  ++P+ERLHFDALG  QL QVF LE+LST GRRLV ++MAQ PSLLYPPGT  LKD+VTNY+SL GSDKWTLQS++LL+FR VLQDV ++
Sbjct:  216 MVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAM 382

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BLAST of Ec-00_004090.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 7.890e-65
Identity = 106/167 (63.47%), Postives = 133/167 (79.64%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M  Q DD  GG+LG+A+YD++ NRRT+G + +GFA L  L D P+EQ+R+SMELGL A    G  LPL+ ++ I P   +P+ERLHFDALGSCQL QVF+LE+LST+GRRLV +VM+Q PSLLYP GTE LKD+V+NYSSLTGSDKWTLQS++LLVFRPV QD  ++
Sbjct:  260 MVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDALGSCQLCQVFLLEMLSTRGRRLVSAVMSQTPSLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAM 426

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BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 7.410e-64
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M  Q DDDTGG+LGN R+DI+ +RRT+GQ+ DG +EL  L D P EQ R+S +LGL    A+G  LPL+T++ I P  ++P+ERLHFDALG  QL QVF LE+LST GRRLV ++MAQ PSLLYPPGT  LKD+VTNY+SL GSDKWTLQS++LL+FR VLQDV ++
Sbjct:  360 MVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAM 526

[Close]

BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5K5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N2_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.510e-62
Identity = 104/169 (61.54%), Postives = 132/169 (78.11%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVN 507
            M  Q DDDTGG+LGN R+DI+ +RRT+GQ+ +G +EL  L D P EQ R+S +LGL    A+G  LPL+T++ I P  ++P+ERLHFDALG  QL QVF LE+LST GRRLV ++MAQ PSLLYPPGT  LKD+VTNY+SL GSDKWTLQS++LLVF  VLQDV ++++
Sbjct:   29 MVSQRDDDTGGDLGNPRFDIDKHRRTWGQITNGLSELDALADVPHEQDRRSRDLGLVPPDASGLPLPLYTAMRIAPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIMLLVFWMVLQDVSAMIS 197

[Close]

BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 3.750e-61
Identity = 103/171 (60.23%), Postives = 128/171 (74.85%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVNYI 513
            M  Q +DDT G+LGN  +DI  +RR +GQ+ +G +EL  L D   EQ R+S ELGL A  A+G  LPL+T++ I P  H+P+ERLHFDALG  QL QVF LE+LST  R+LV ++MAQ P LLYPPGTE LKDIVTNY+SLTGSDKWTLQS++LLVFR VLQ+V ++   I
Sbjct:    1 MVRQQNDDTSGDLGNPNFDIGKHRRAWGQITEGLSELDALADL-REQDRRSKELGLVAPDASGLPLPLYTAMRIVPTEHVPVERLHFDALGQSQLCQVFFLEMLSTAARQLVSAIMAQKPPLLYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTREI 170

[Close]

BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.000e-59
Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M    DD+TGG++GN ++DI+ +RRT G+  DGF+EL  L D P +Q  +S ELGL A +A+G  LPL+ ++ I P  H+P+ERLHFDALG CQL QVF LELLS +GRRLV ++MAQ  SLLYPPGT+ LKDI+T+Y SLTGSDKWTLQS++LLVFR VLQD+ S+
Sbjct:  168 MVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSM 334

[Close]

BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5JYV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV0_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 2.960e-59
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESLVNY 510
            M  Q D+ TGG+LG+A+YDIE NRRT+GQ+  G      L D   EQ+R+SM LGL A S NGP LP++ S+   P   +P+ERLHFDALGSCQL QV  LE+LSTQGRRLV +V+AQ PSLLYP GTE LKDIV+NYSSLTGSDKWTLQS++LLVFRP+  +V ++V +
Sbjct:  301 MVEQRDNITGGDLGDAQYDIEANRRTWGQITAGLDTPKSLADNIVEQSRQSMVLGLVADS-NGPSLPMYDSMLTAPTAVVPVERLHFDALGSCQLCQVSCLEMLSTQGRRLVSAVVAQNPSLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPIRANVGAMVRF 469

[Close]

BLAST of Ec-00_004090.1 vs. uniprot
Match: A0A6H5JYX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX6_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 6.550e-59
Identity = 105/172 (61.05%), Postives = 132/172 (76.74%), Query Frame = 1

Query:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAA-----GSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFVLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVFRPVLQDVESL 501
            M  Q DDDTGG+LGN R+DI+ +RRT+GQ+ DG +EL  L D P EQ R+S +LG+ +     G+A+G  LPL+T++ I P  ++P+ERLHFDALG  QL QVF LE+LST GRRLV ++MAQ PSLLYPPGT  LKD+VTNY SL GSDKW LQS++LLVFR VLQDV ++
Sbjct:  309 MMSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPHEQDRRSRDLGMRSTIKRPGNASGLPLPLFTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYVSLNGSDKWILQSIVLLVFRIVLQDVSAM 480

The following BLAST results are available for this feature:

BLAST of Ec-00_004090.1 vs. uniprot

BLAST of Ec-00_004090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXD1_ECTSI	1.870e-123	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KDY2_9PHAE	1.220e-65	61.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KU21_9PHAE	2.390e-65	62.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G2D4_ECTSI	7.890e-65	63.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQX1_9PHAE	7.410e-64	62.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5N2_9PHAE	1.510e-62	61.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KXT2_9PHAE	3.750e-61	60.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLQ7_9PHAE	1.000e-59	61.08	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYV0_9PHAE	2.960e-59	62.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYX6_9PHAE	6.550e-59	61.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:5097750..5098652 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	528
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004090.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004090	Ec-00_004090	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 5097750..5098652 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004090.1.2	Ec-00_004090.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5097750..5098007 -
Ec-00_004090.1.1	Ec-00_004090.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5098383..5098652 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004090.1	CDS:Ec-00_004090.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 5097750..5098007 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004090.1	Ec-00_004090.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 5097750..5098652 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:5097750..5098652-
coding sequence from alignment at chr_00:5097750..5098652-

mRNA sequence

>Ec-00_004090.1 ID=Ec-00_004090.1|Name=Ec-00_004090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=176bp
MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARK
SMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFV
LELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQ
SMLLLVFRPVLQDVESLVNYIVYSN*

spliced messenger RNA

>Ec-00_004090.1 ID=Ec-00_004090.1|Name=Ec-00_004090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=528bp|location=Sequence derived from alignment at chr_00:5097750..5098652- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCCCACAGGCCGACGACGACACCGGGGGGGAGCTAGGAAATGCTCG
GTATGACATTGAGACTAACCGGCGTACGTATGGCCAGATGAAGGACGGTT
TTGCCGAGCTGGCGTTGCTCGTAGATCAGCCGGCTGAGCAGGCTAGAAAA
TCGATGGAGCTGGGCCTCGCCGCGGGTAGCGCCAATGGTCCCGGGTTACC
TCTCTGGACATCGCTCCACATCAACCCTCTTCGGCACATGCCGATCGAAC
GGTTGCATTTCGATGCTTTGGGTTCGTGCCAGCTCAACCAGGTCTTTGTC
CTAGAGTTGCTCTCGACACAAGGCCGCCGGCTCGTCCAGAGTGTCATGGC
CCAGCCACCGTCCCTGCTGTACCCACCAGGCACGGAGCACCTGAAGGACA
TCGTGACGAACTACTCGTCTCTTACTGGGAGTGACAAATGGACGCTGCAA
TCTATGTTGCTGCTTGTCTTTCGACCCGTTCTGCAAGACGTCGAGTCTCT
GGTGAACTATATTGTATATTCCAATTGA

protein sequence of Ec-00_004090.1

>Ec-00_004090.1 ID=Ec-00_004090.1|Name=Ec-00_004090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=176bp
MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARK
SMELGLAAGSANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVFV
LELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTNYSSLTGSDKWTLQ
SMLLLVFRPVLQDVESLVNYIVYSN*

mRNA from alignment at chr_00:5097750..5098652-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004090.1 ID=Ec-00_004090.1|Name=Ec-00_004090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=903bp|location=Sequence derived from alignment at chr_00:5097750..5098652- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCCCACAGGCCGACGACGACACCGGGGGGGAGCTAGGAAATGCTCG
GTATGACATTGAGACTAACCGGCGTACGTATGGCCAGATGAAGGACGGTT
TTGCCGAGCTGGCGTTGCTCGTAGATCAGCCGGCTGAGCAGGCTAGAAAA
TCGATGGAGCTGGGCCTCGCCGCGGGTAGCGCCAATGGTCCCGGGTTACC
TCTCTGGACATCGCTCCACATCAACCCTCTTCGGCACATGCCGATCGAAC
GGTTGCATTTCGATGCTTTGGTAAGTGATGATAGGACATTTGGATACTCG
GTCACTAAAACGGTGTGCCTCCCGAATTGTATTTCTGTGTAAAACGGATG
GTGTGACCATCGGAGGAGGAAAACCGACTACTTGAACGAATGTTTAGATT
CCGTTGCGCAGCCTCGGTGGATGCAGGGCCGTTCGAGTCACGTCTCCCCG
TGCGCGCCAAATTAGTATGTTGTCCTTTTTCGGGTTGGGTGGGTTCAACT
ATATTGTGTACGCACGACAGCCCACGTGAGCCATGGGGGTCAAACACTTT
CCCCCCATCAACAAGTTCAAGAGTTGAAATCCACCATCATCCCAACTCCA
ATACCGTTTTCATGCGTTTGCCATATTTTCTCATTATCCCAACAGGGTTC
GTGCCAGCTCAACCAGGTCTTTGTCCTAGAGTTGCTCTCGACACAAGGCC
GCCGGCTCGTCCAGAGTGTCATGGCCCAGCCACCGTCCCTGCTGTACCCA
CCAGGCACGGAGCACCTGAAGGACATCGTGACGAACTACTCGTCTCTTAC
TGGGAGTGACAAATGGACGCTGCAATCTATGTTGCTGCTTGTCTTTCGAC
CCGTTCTGCAAGACGTCGAGTCTCTGGTGAACTATATTGTATATTCCAAT
TGA

Coding sequence (CDS) from alignment at chr_00:5097750..5098652-

>Ec-00_004090.1 ID=Ec-00_004090.1|Name=Ec-00_004090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=528bp|location=Sequence derived from alignment at chr_00:5097750..5098652- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCCCACAGGCCGACGACGACACCGGGGGGGAGCTAGGAAATGCTCG
GTATGACATTGAGACTAACCGGCGTACGTATGGCCAGATGAAGGACGGTT
TTGCCGAGCTGGCGTTGCTCGTAGATCAGCCGGCTGAGCAGGCTAGAAAA
TCGATGGAGCTGGGCCTCGCCGCGGGTAGCGCCAATGGTCCCGGGTTACC
TCTCTGGACATCGCTCCACATCAACCCTCTTCGGCACATGCCGATCGAAC
GGTTGCATTTCGATGCTTTGGGTTCGTGCCAGCTCAACCAGGTCTTTGTC
CTAGAGTTGCTCTCGACACAAGGCCGCCGGCTCGTCCAGAGTGTCATGGC
CCAGCCACCGTCCCTGCTGTACCCACCAGGCACGGAGCACCTGAAGGACA
TCGTGACGAACTACTCGTCTCTTACTGGGAGTGACAAATGGACGCTGCAA
TCTATGTTGCTGCTTGTCTTTCGACCCGTTCTGCAAGACGTCGAGTCTCT
GGTGAACTATATTGTATATTCCAATTGA

Synonyms

The feature 'Ec-00_004090.1' has the following synonyms


Synonym
Esi0325_0003
Esi_0325_0003