Ec-00_003960.4 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003960.4
Unique NameEc-00_003960.4
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length444
Homology
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BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5JQV7_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV7_9PHAE)

HSP 1 Score: 807 bits (2085), Expect = 7.640e-283
Identity = 405/429 (94.41%), Postives = 413/429 (96.27%), Query Frame = 1 
Query:   85 IRGARTTLGEE-PRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGGG 1368
            +  ARTTLGEE PRRRRTQ WCETPETRAALE+ALT RREARRAMRGN NSATWR LKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRG YQHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGDIP+EWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLR+LVC EEGKTEAGGG
Sbjct:  133 LDAARTTLGEEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGQYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRSLVCLEEGKTEAGGG 561
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BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5K3W7_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W7_9PHAE)

HSP 1 Score: 792 bits (2045), Expect = 1.040e-277
Identity = 398/429 (92.77%), Postives = 407/429 (94.87%), Query Frame = 1 
Query:   94 ARTTLGEEPRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGGGGGDT 1380
            ARTTLG+EPRRRRTQ WCETPETR ALE+ALT RREARRAMRGN NSATW  LKAACKGVATAVETGIYAHLDGYVTELE IYKDRDM GL QHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNP IIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGDIP+EWKDATIKVLYK GDRSNCNNYRGISLLSHVGKVPIKIITNRLSAF EANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGELSDW FVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLR+LVC +EGKTEAGGGG DT
Sbjct:   75 ARTTLGKEPRRRRTQEWCETPETREALEQALTKRREARRAMRGNWNSATWSVLKAACKGVATAVETGIYAHLDGYVTELEKIYKDRDMLGLCQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPHIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKNGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFNEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWLFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRSLVCLKEGKTEAGGGGRDT 503
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5J7L3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7L3_9PHAE)

HSP 1 Score: 757 bits (1955), Expect = 4.380e-265
Identity = 381/408 (93.38%), Postives = 390/408 (95.59%), Query Frame = 1 
Query:  148 ETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGGGG 1371
            ETPETRAALE+ALT RREARRAMRGN NSATWR LKAACKGVATAVETG YAHLDGYVTELE IYKDRDMRGLYQHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPG+DS+ AELLKIDDDEP VL HLHTILVKVWNGGDIP+EWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKV IKIITNRLSAFCEANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLS LLFNIFFAEVLEVVVIRFSEDDVV R+LVC EEGKTEA GGG
Sbjct:   24 ETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACKGVATAVETGNYAHLDGYVTELEEIYKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGYDSIAAELLKIDDDEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVSIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSLLLFNIFFAEVLEVVVIRFSEDDVVRRSLVCLEEGKTEAVGGG 431
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 763 bits (1969), Expect = 5.030e-261
Identity = 383/427 (89.70%), Postives = 396/427 (92.74%), Query Frame = 1 
Query:   85 IRGARTTLGEEPRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGG 1365
            +  ARTTLGEEPRRRRTQ WCETPETRAALE+ALT RREARRAMRGN NSATWR LKAAC+GVATAVET I+AHLD YVTELE IYKDRDMRGLYQ LKRSVGLSGRQ GGQQF+ +++GVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQR ATRD+QRLG+VP LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGD P EWKDATI VLY KGDRSNCNNYR ISLLSHVGKVPIKIITNRLSAF EANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGELSDW FVTQ VRQGCVLSPLLFNIFF EVLEVV+IRFSEDDVVLR+LVC EEGK EAGG
Sbjct:  381 LDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACQGVATAVETVIHAHLDAYVTELEEIYKDRDMRGLYQRLKRSVGLSGRQAGGQQFITNKDGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRQATRDTQRLGDVPKLEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKVWNGGDFPLEWKDATITVLYNKGDRSNCNNYRRISLLSHVGKVPIKIITNRLSAFGEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWLFVTQRVRQGCVLSPLLFNIFFTEVLEVVIIRFSEDDVVLRSLVCLEEGKAEAGG 807
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BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5K556_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K556_9PHAE)

HSP 1 Score: 727 bits (1876), Expect = 8.030e-251
Identity = 367/420 (87.38%), Postives = 380/420 (90.48%), Query Frame = 1 
Query:   85 IRGARTTLGEEPRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEE 1344
            +  ARTTLGEEPRRRRTQ WCETPETRAALE+ALT RREA RAMRGN +SATWR LKAACKGVATAVE GIYAHLDGYVTELE IYKDRD++GLYQHLKRSVGL+GRQ  GQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATR                    LKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGDI +EWKDAT+KVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREM WKVLA AGIPAKLI+VIRQFHDG+RARVRMDDGELSDWFFVTQGVRQGCVLSPLL NIFFAEVLEVVVIRFS+DDVVLR+LVC +E
Sbjct:   72 LDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREAHRAMRGNRSSATWRVLKAACKGVATAVEPGIYAHLDGYVTELEEIYKDRDIQGLYQHLKRSVGLNGRQAEGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATR--------------------LKNWKAPGHDSLPAELLKIDDDEPFVLAHLHTILVKVWNGGDISREWKDATVKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMQWKVLARAGIPAKLIEVIRQFHDGLRARVRMDDGELSDWFFVTQGVRQGCVLSPLLSNIFFAEVLEVVVIRFSKDDVVLRSLVCLDE 471
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5JYS1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS1_9PHAE)

HSP 1 Score: 690 bits (1780), Expect = 4.680e-238
Identity = 356/406 (87.68%), Postives = 365/406 (89.90%), Query Frame = 1 
Query:   85 IRGARTTLGEEPRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFS 1302
            +  ARTTLGEEPRRRRTQ WCETPETRAALE+ALT RREARRAMRGN NSATWR LKAACKGVATAVETGIYAHL GYVTEL+ I KDRDMRGLYQHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKV                 LYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPE+QCG     STVDMLFVVRRLQ+LGRRKKIPLYMCFVDL K YDSVDREMLWKVLA AGIPAKLI+VIRQFHD MRARVRMDDGELSDWFFVTQGVRQG VLS LLFNIFFAEVLEVVVIRFS
Sbjct:   72 LDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNWNSATWRVLKAACKGVATAVETGIYAHLGGYVTELQEICKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKV-----------------LYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEQQCG-----STVDMLFVVRRLQKLGRRKKIPLYMCFVDLNKEYDSVDREMLWKVLARAGIPAKLIEVIRQFHDAMRARVRMDDGELSDWFFVTQGVRQGYVLSSLLFNIFFAEVLEVVVIRFS 455
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5LQV6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQV6_9PHAE)

HSP 1 Score: 681 bits (1756), Expect = 3.090e-236
Identity = 339/367 (92.37%), Postives = 349/367 (95.10%), Query Frame = 1 
Query:  214 MRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDV 1314
            MRGN NSATWR LKAACKGVATAVE GIYA L GYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLL T+ PTLNPDIIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGD+P+EWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITN L+AFCEANNILPEEQ GFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDG+LS+ FFVTQGVRQGCVLSPLLFNI FAEVLEVVVIRFSEDDV
Sbjct:    1 MRGNWNSATWRVLKAACKGVATAVEMGIYADLGGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLRTEFPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKVWNGGDVPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNCLTAFCEANNILPEEQGGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGKLSNCFFVTQGVRQGCVLSPLLFNIIFAEVLEVVVIRFSEDDV 367
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5J8S3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S3_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 1.420e-221
Identity = 318/339 (93.81%), Postives = 325/339 (95.87%), Query Frame = 1 
Query:  355 MRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGGGG 1371
            MRGLYQHLKRSVGLSGRQ GGQQFVADENGVLL NRDDILQRWARFFST LNTKSPTLNPDIIERVTQRPATRD+QRLG+VP+LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVK WNGGDIP+ WK+ATIKVLYK GDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLR+LVC EEGKTEAGG G
Sbjct:    1 MRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLLNRDDILQRWARFFSTPLNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKGWNGGDIPRVWKNATIKVLYKNGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRSLVCLEEGKTEAGGAG 339
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5L1Q6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Q6_9PHAE)

HSP 1 Score: 642 bits (1655), Expect = 6.290e-218
Identity = 323/357 (90.48%), Postives = 332/357 (93.00%), Query Frame = 1 
Query:   85 IRGARTTLGEEPRRRRTQGWCETPETRAALEEALTTRREARRAMRGN*NSATWRTLKAACKGVATAVETGIYAHLDGYVTELEAIYKDRDMRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDG 1155
            +  ARTTLGEEPRRRRTQ WCETPETRAALE+ LT RREARRAMRGN NSAT   LKAACKGVATAVETGIYAHLDGYVTELE IYKDRDMRGLYQHLKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNP IIERVTQRPA RD++RLG+VP LEEVARA KGLKNWKAPGHDSLPAELLKIDDDEP VL HLHTILVKVWNGGDI +EWKDATIKVL+KKGDRSNCNNYRG SLL HVGKVPIKIITNRLS FCEAN ILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPA+LI+VIRQFHDG
Sbjct:  157 LDAARTTLGEEPRRRRTQEWCETPETRAALEQTLTKRREARRAMRGNWNSATRTVLKAACKGVATAVETGIYAHLDGYVTELEEIYKDRDMRGLYQHLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPHIIERVTQRPAARDTRRLGDVPRLEEVARATKGLKNWKAPGHDSLPAELLKIDDDEPFVLGHLHTILVKVWNGGDILREWKDATIKVLHKKGDRSNCNNYRGTSLLPHVGKVPIKIITNRLSTFCEAN-ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLAGAGIPARLIEVIRQFHDG 512
[Close]
BLAST of Ec-00_003960.4 vs. uniprot
Match: A0A6H5L1H2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H2_9PHAE)

HSP 1 Score: 637 bits (1644), Expect = 1.420e-215
Identity = 315/338 (93.20%), Postives = 325/338 (96.15%), Query Frame = 1 
Query:  355 MRGLYQHLKRSVGLSGRQEGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRPATRDSQRLGEVPDLEEVARAAKGLKNWKAPGHDSLPAELLKIDDDEPVVLRHLHTILVKVWNGGDIPQEWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG*STVDMLFVVRRLQELGRRKKIPLYMCFVDLKKAYDSVDREMLWKVLATAGIPAKLIKVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLRNLVCWEEGKTEAGGG 1368
            MRGLYQ LKRSVGLSGRQ GGQQFVADENGVLLRNRDDILQRWARFFSTLLNTK PTLNPDIIER TQRPATRD+QRLG+VP+LEEVARA K LKNWKAPGHDSLPAE+LKIDDDEP VL HL TILVKVWNGGDIP+EWKDAT+KVLYK+GDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPG STVDMLFVVRRLQELGRRKKIPLYMCFVDL KAYDSVDREMLWKVLA AGIPAKLI+VIRQFHDGMRARVRMDDGE+SDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVL+NLVC EEGKTEAGGG
Sbjct:    1 MRGLYQPLKRSVGLSGRQAGGQQFVADENGVLLRNRDDILQRWARFFSTLLNTKLPTLNPDIIERGTQRPATRDTQRLGDVPELEEVARATKVLKNWKAPGHDSLPAEMLKIDDDEPFVLGHLQTILVKVWNGGDIPREWKDATMKVLYKEGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREMLWKVLARAGIPAKLIEVIRQFHDGMRARVRMDDGEVSDWFFVTQGVRQGCVLSPLLFNIFFAEVLEVVVIRFSEDDVVLQNLVCLEEGKTEAGGG 338
The following BLAST results are available for this feature:
BLAST of Ec-00_003960.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQV7_9PHAE7.640e-28394.41Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3W7_9PHAE1.040e-27792.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J7L3_9PHAE4.380e-26593.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JBD7_9PHAE5.030e-26189.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K556_9PHAE8.030e-25187.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JYS1_9PHAE4.680e-23887.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LQV6_9PHAE3.090e-23692.37Reverse transcriptase domain-containing protein (F... [more]
A0A6H5J8S3_9PHAE1.420e-22193.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L1Q6_9PHAE6.290e-21890.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L1H2_9PHAE1.420e-21593.20Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4675723..4682270 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score87.0
Seed ortholog evalue2.3e-14
Seed eggNOG ortholog6500.XP_005100548.1
Length3078
Hectar predicted targeting categoryother localisation
Gene idEc-00_003960.4
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39TZY@33154,3BI15@33208,3E41I@33213,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003960Ec-00_003960Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4640066..4682270 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003960.4.1Ec-00_003960.4.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4675723..4675815 +
Ec-00_003960.4.2Ec-00_003960.4.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4679286..4682270 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0039605UTR:Ec-00_003960.4Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 4675723..4675815 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003960.4CDS:Ec-00_003960.4Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4680739..4682070 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0039603UTR:Ec-00_003960.4Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 4682071..4682270 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003960.4Ec-00_003960.4Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4680739..4682070 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003960.4 ID=Ec-00_003960.4|Name=Ec-00_003960.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=444bp
MRAKDKPTATSQSPPPPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLT
REISYRSRGAWACLRRYGQELFDKPKAPFRLKIRLLQAEAMEALLYGCMT
WSPLSGHYQTLQSTHRRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVE
ATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCV
LDDLKAFGADHGSTKTDPSCLGIPVPKDTAPKSRWTEAAKVEGGVPWHAA
VLQGAERFMTSWHEKGRRGQPTTSAQTKPQANNQWGGRGAGDGRDGEGRK
QTRRDGPSGTTRAGLNFFSPIPPPPTLHHCTNPPVVVISYHYNVSLVGGH
VCVFACSLVVSPPCALFCLILPVIFGLVPLCPRPFFHFFILFSFIFSSPY
GFHFYFFSFFFSLSFFVFFMFSFFLSFSVPDGLVSACVVKYQD*
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spliced messenger RNA

>Ec-00_003960.4 ID=Ec-00_003960.4|Name=Ec-00_003960.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3078bp|location=Sequence derived from alignment at chr_00:4675723..4682270+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAACACTGGGAGCTGTCTATGCAGCTCTTCAACGCCCGCGTGCGCTC
CCCCGTGCGTGATTGGAACATGGCCGTGCTCAACAATCCGGGGCAGCGCG
GACGACCCTAGGGGAGGAACCGCGGAGACGCCGCACGCAGGGGTGGTGTG
AGACCCCAGAGACGAGAGCAGCGCTGGAGGAGGCCCTTACCACACGGCGG
GAAGCGCGCCGGGCGATGAGGGGCAACTGAAACTCAGCAACGTGGAGAAC
TCTCAAAGCAGCGTGTAAGGGAGTGGCTACAGCAGTCGAAACGGGCATTT
ATGCCCACCTGGACGGATATGTGACTGAACTCGAAGCAATCTACAAAGAT
CGCGACATGAGAGGACTGTACCAACACCTCAAGAGATCAGTGGGCCTCAG
CGGGAGACAAGAGGGGGGACAGCAGTTCGTCGCGGATGAGAACGGCGTGT
TGCTCCGGAACAGGGACGACATCCTCCAACGGTGGGCGAGATTCTTCAGC
ACCCTACTCAACACCAAATCCCCCACCCTGAACCCAGACATCATCGAACG
AGTGACGCAGCGGCCAGCGACACGTGACAGTCAACGGTTGGGAGAGGTGC
CAGATCTCGAGGAGGTGGCACGGGCAGCGAAAGGCCTCAAGAACTGGAAG
GCACCCGGCCATGACTCCCTCCCTGCCGAATTGCTCAAGATCGATGACGA
CGAACCCGTTGTCCTGAGACACCTCCATACCATCCTCGTCAAGGTGTGGA
ACGGAGGAGATATCCCCCAAGAGTGGAAGGACGCAACCATCAAGGTGCTG
TACAAGAAGGGTGACCGGTCCAACTGTAACAACTACAGGGGGATTTCGCT
ACTATCTCACGTAGGCAAGGTTCCCATCAAGATCATCACCAACCGTCTAA
GCGCCTTCTGCGAAGCCAACAACATCCTCCCGGAGGAACAGTGCGGATTC
CGACCCGGGTGATCCACCGTCGACATGCTGTTTGTCGTGCGTCGCCTCCA
GGAGCTGGGCCGGAGAAAGAAAATACCGCTCTACATGTGCTTCGTCGACT
TGAAGAAGGCGTATGATTCGGTGGACCGAGAGATGCTATGGAAGGTGCTG
GCCACGGCCGGGATTCCCGCGAAGCTAATCAAAGTCATCCGCCAATTCCA
CGATGGAATGCGGGCCCGGGTGCGCATGGACGACGGAGAACTATCGGACT
GGTTCTTCGTCACACAGGGTGTGCGACAAGGATGTGTGCTATCCCCACTG
CTGTTCAACATCTTCTTCGCCGAGGTCCTCGAGGTCGTCGTTATCCGATT
CAGCGAGGATGATGTTGTTTTGCGGAATCTGGTGTGCTGGGAGGAGGGGA
AGACGGAAGCGGGGGGGGGGGGAGGAGACACCCATTGACCGAGTACGGAG
GGCAGTATGGGGGATGCTGTATGCCGATGATGCCGGCGTCGTATCGAGGT
CTGCAGAAGGACTGGCGAGAATGATGACCATCATCGTTGAGGTGTTCGGA
GAGTTCGGGCTAAACGGTGTCGGAGAAGAAGACGGAGACGCTCCTGATGC
GCGCGAAGGACAAGCCGACTGCAACATCACAGTCCCCCCCGCCTCCTCCT
CCACCACTGACTATCGAAGCCGCGGGACAGAAATACGCCCAGACGACCGA
GTTCCGGTACCTCGGTGGCCTCGTCAACGAACATGGCGACCTCACCCGGG
AGATCAGCTACAGGAGCAGAGGAGCGTGGGCGTGCCTCAGGCGATATGGC
CAGGAGCTCTTCGACAAACCGAAAGCGCCATTCCGACTCAAGATCCGCCT
CCTCCAGGCGGAGGCGATGGAGGCACTGCTGTACGGCTGCATGACATGGT
CACCACTCAGCGGCCACTATCAGACGCTGCAGTCGACACACCGCCGACTG
CTCCTTCGAGTTATCGGGTACAAGCGCAAGAAAGACACCTACCGGCAGCT
CTCGTACGCCCAGACGCTGAAGAGGGTCGAATGCCAGAGCGTTGAAGCCA
CGATCCGACAACGACGCCTACTGTTCGCGGGAGCACTGGCAAGGCAGCCG
GACGGGCGACTCCCGAAACGACTGATGCTCGGCGAGCTGGCGGGGGGGGA
GAAGCCACGTAGGGGGGGACAGGAACAGAACTGGCCGAAGTGTGTGCTCG
ACGACCTGAAGGCCTTCGGGGCCGACCACGGATCTACGAAAACCGACCCA
AGTTGTCTCGGAATTCCCGTACCGAAAGACACGGCACCGAAGTCAAGGTG
GACGGAAGCCGCGAAGGTGGAGGGGGGAGTACCCTGGCATGCGGCGGTGC
TGCAGGGAGCTGAGAGGTTCATGACCTCCTGGCACGAGAAGGGAAGAAGA
GGTCAGCCGACAACGAGCGCTCAAACGAAACCACAAGCCAACAACCAATG
GGGCGGGAGGGGGGCAGGAGACGGACGAGACGGCGAGGGAAGAAAGCAAA
CGAGAAGAGACGGACCGAGTGGCACGACACGTGCCGGATTGAATTTCTTT
TCGCCAATTCCCCCCCCCCCAACGCTGCACCATTGCACCAACCCCCCAGT
AGTAGTGATTTCGTACCATTACAATGTATCGCTGGTTGGTGGCCATGTTT
GCGTGTTTGCTTGTTCGTTAGTGGTCTCTCCACCGTGTGCCTTGTTCTGC
CTCATACTTCCTGTTATTTTCGGCCTGGTCCCTCTTTGTCCTCGCCCTTT
TTTTCATTTTTTCATTTTATTTTCATTTATTTTCTCTTCTCCTTACGGTT
TCCATTTTTATTTTTTCTCCTTTTTTTTCTCTTTGTCCTTTTTTGTTTTT
TTTATGTTCTCTTTTTTTCTCTCTTTTTCTGTGCCAGATGGACTTGTCTC
TGCTTGCGTTGTGAAGTACCAAGATTGAACCAAGGGAGTGTGCCTCTTTC
TCTCCGGCCCATGATAGATAGTGACTGCTAATCTCAGTTGATACCCCGCA
TAGCGTGAAGAGGGAGCGGAGGATCCCAGAATATCTGTCGTTGATTTCTA
TTGACTTGCGGACCCCTCGGGGACAGTATATTGGAGTGTACCTTTTTAGG
GTAAGTTAACCTGTGACCACGGGAATCG
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protein sequence of Ec-00_003960.4

>Ec-00_003960.4 ID=Ec-00_003960.4|Name=Ec-00_003960.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=444bp
MRAKDKPTATSQSPPPPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLT
REISYRSRGAWACLRRYGQELFDKPKAPFRLKIRLLQAEAMEALLYGCMT
WSPLSGHYQTLQSTHRRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVE
ATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCV
LDDLKAFGADHGSTKTDPSCLGIPVPKDTAPKSRWTEAAKVEGGVPWHAA
VLQGAERFMTSWHEKGRRGQPTTSAQTKPQANNQWGGRGAGDGRDGEGRK
QTRRDGPSGTTRAGLNFFSPIPPPPTLHHCTNPPVVVISYHYNVSLVGGH
VCVFACSLVVSPPCALFCLILPVIFGLVPLCPRPFFHFFILFSFIFSSPY
GFHFYFFSFFFSLSFFVFFMFSFFLSFSVPDGLVSACVVKYQD*
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mRNA from alignment at chr_00:4675723..4682270+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003960.4 ID=Ec-00_003960.4|Name=Ec-00_003960.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6548bp|location=Sequence derived from alignment at chr_00:4675723..4682270+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAACACTGGGAGCTGTCTATGCAGCTCTTCAACGCCCGCGTGCGCTC
CCCCGTGCGTGATTGGAACATGGCCGTGCTCAACAATCCGGGGGTACGGT
CCGGGCTTCGCGATCAAGTGCTTCAATGGGCTCATGACAGTCCAGCTGTT
CACCATGTGGTAGCCGCAGATATGCTATTGTATTCCTTTGCGCTGTCCGT
TTTCAAGCACCAAACGACGGTAGCACTCGGTACGAATTGGCTCGAGGGCG
GATCGCAGCGTTGACCGTACGCGTCAATACCTCATGTGCCTGGAGTGTCG
TGGGGTCCTTCAATATCTTTCGGGGGTGAATTGATGCTCTCGCCGGAACC
TTCAGAATCATGCAAGGAGCGTTTCTAGATTCGTTCTTTCTCCGCCATCT
AATGACATCAGCTGTGCCCCAAGCTGTGACAACCGAGAGGAGCCTCTTCT
CTATTTAGTGCCATATGTTTTGGGTCCTACATGTACAACATGACAACGGC
GTACATCCTAGAGCGGAGATTTCGGTACAATGCCGCGTAGGCTTCCTTGG
TACAGTGAGCCAGTACTTTCCAACGCCATAGGTTTGGGTCGTGTCGGTTG
GGTTGGGGTTAGGGGTGCGGTATCCTAGCTTTGGAGCGGTGCAAAACAAT
GTACAGCGGGCGGGGTTTCGGTGTATACCTCCCCACACCTCCCCTCCACC
CACCCACCGCCGACCTATTGGTCTATATACCGCACCTCTGGAGTTGTTCC
AAGAACCTTCATCGGGAAAACTCCCGTCGACCATTGCGACGAAGTCTATG
GCACCAACGGGTGGGCGGTGGCCCCTCGCGCGTCCCCCCCCCTTGTACTT
ATATACAACCAAGTTACAGATAGTTGATCTTCAACTCCTGCAGGAGTTAC
CCCGCCTCACAGTCCCGGAGTTTTTGACTTCCCTCAATTTAAGACTTTTA
CGTCGGCCCGGCCGCAGGCCCGCGAGAGGACACCGATCGACTTGTTCTCT
TCTTCGCGGTGCCGACCGGAAAAATCTTTCCATCGTGACCTTCCTGCAGC
GGGGGCTCGACAGTGGCACGCCTGCTGTGGTACGGCACCGCCAAGTTCGA
GCAAACCTCGACCTGCTCGGCTGTTGTTCCGGCCAGACGTTCCAACCGGA
AGTTGATACGATGGATACTTCACTATGGTCGACAAGTATCCGAAGGGCGC
GGGCTGTCATGGCCGGGGATTCGAACAAACAGTATAACATTCCAGCTTGT
GAGGAACCATATGACTGATATTGGACGTGGCCGATCACCCGTTTGAAGTC
GTAGCACTGCTTGATTGTTCTGCATGATCAATCTCCCGCAGATGTAACAT
ACTTATCTTTCCAGGGTAAGAGAGATATATATGCTTGTCTGGAACATGGT
ACGCGTACGGATGAAGCACATAGACATCCACGGTGTGCCGCGCTTTGCCA
CGAGCGGGGGCGTAAGCTAACCGAAGTGATTTGTTCTGGGGCTTGTATTT
TCATACACCTTTCATCTCATCATTGGCTCAATCCACTCACTTTTGGACAC
CGAACGAGCTCTCGCTAGTCTTCTCTCGACGAATCTGCTAGCGTGGGAGC
CTCGTTTATCCCGAATGGTCAGCTTACCACCCATAGTGTACGCGCGAAGT
AGTGTGTCGATTGTGTGTACTGACACCTTTACCCCACGGCAGCGCGGTCA
TCACGGTCCGCCAGTCTATTGGATTGATTACTTGCTGGCCCCTTGAAATT
GCCCGTCATCCACCGCGCATTCCTTTTACGAAACATCCCAGAACACTGAC
GGGCACCAAGCCTAACCCTGTCTGTACACTCCGGCCTCACCTTGCCGTAC
GCGTGCCACCCGTACCTATCGTTTTACGTGAATCTGCTCACATTCGAATG
TACACAGCAGTGCACATTTTCGCCGGCGTCTCCACAGCAGACCGTAGTCT
TACCCTTGGTTGAAGGATCTTGTTCCGCGCCACTGAAATTCCGTTTTCAC
CAAAGCACAGTGTATACACATTACACACGGCTGTAGATCTCACTACGCCG
TGGCGCCCACCGAATACCTCATACCGGCTACTCCGCCGTTGCACACCGCC
GTGACCTCTTCCTTTTGATTGGATGATTGATTCCGACAATTTCTCAAAAA
TATATTCTTTGCTGCGCCGCATGCATACATATTTGGTTGGTTTCTTTCGA
ATTGCTTCATTGTTTATCTTCTTCTAGGACACGCGTTGGGGAGTGAGACA
CACGGAACACACATCGTGTCGCCAGCCACATTGACTACGAGGCGCAGCGT
TGACACCTACAAATTCGTCTCTCCCCGCAAAAAAAAACAGCCGGGAACTG
AGACTGTAAACGTAAGAGTCCCGCACACGTAGCCACTTTGCTCCGCCTTT
TGCTTACCCTGCGGGACCAACACCCTTCACACCCGCTGTCGAGACCCTGC
CGGGGACTGTTGTTCTACAAGGTCTCCAGTAGGCGACCTTGTCGAGAGAC
CACGCTGGTCAGGGGTGCATTGCCTATACCCTGTGCCACCTGGAAGTATT
GAGAGTGCCAAAAGAAGCACCACCATTGAAGAGTCCTCACCCGACGAAAT
GTGTCCGTATTATACTGAATATGGTATCAGAATATGCATACTCCGATGTG
TTTTGATTTCCAGAGGCAGTCTACGAGTACGGGAAAAAAAGAAAAAAATC
GCAGCACGTACCGGAGGTGACACAAGATACCACGTCCCCTGAACCGCTTT
TCAGAGCTCGATTTTTCTCCGCAAAACAGAATTAGTGGCAGCGGTGAAAA
TGGCGGCGTTGAAGAAGCTGTCTCGTCAAGAGCTTTCCGAAAAGGTGTCG
TTCCATTTATGCAATACCCACCAAAAAAAAAGAAAAAACAATGAACAGAC
ACCAACACAGACACCAATGAAATTCCCCTACAAGAGGTACAGTAGTTCAG
ATGTCACACGGTGAACGCAGTTTAATCTGCTAAATTTAAAGTGTGCTGCA
CGCAAGGATACGCAAAAAAGCTTCGATGAACGACACTTGGCGCAAATCAA
AACAACGGCCCGCACAACGCGCGAATATACAACCACAAACATGTGGTGCT
TTGTTGATGATGAGCATGAGGCCGATCCCTAAGCGTCCAAGACGAGGGCA
CTATTTTCCCTTTCCCTCGGGGTTTATCTCCACCGCGTCGGGTCCATCAG
AAACGTCGATCCTGTGACGTCAATGCGCACAGGAAACGTGTCGTTGTCAA
AGAGGAAGACGACAAAACAACCTCTACAAGCTCTGCGGCGGCGACGTGTA
CTCGTACAAATGTACAGTGAACTCAGGGCACGTATAATTTGTACGTCGAC
GAAAAATTAATGCGTGGCTCGTATAATGAGGGCCTTTGGACGTGGCCCCG
CCCAACATCCGAATATTGAGAACATACAGATCCGTTCCCACCTCGAACGA
AAGTGTCCTGGTTGACGCTGTGGTGAACCTCGTTTAAAAGGTACCTACAC
TGGACGAACGAACAACCACCGCCGCGGAATTGGTGACCGACTTTACCAAT
GCTCTCCTCGAAGCAGCGCGGACGACCCTAGGGGAGGAACCGCGGAGACG
CCGCACGCAGGGGTGGTGTGAGACCCCAGAGACGAGAGCAGCGCTGGAGG
AGGCCCTTACCACACGGCGGGAAGCGCGCCGGGCGATGAGGGGCAACTGA
AACTCAGCAACGTGGAGAACTCTCAAAGCAGCGTGTAAGGGAGTGGCTAC
AGCAGTCGAAACGGGCATTTATGCCCACCTGGACGGATATGTGACTGAAC
TCGAAGCAATCTACAAAGATCGCGACATGAGAGGACTGTACCAACACCTC
AAGAGATCAGTGGGCCTCAGCGGGAGACAAGAGGGGGGACAGCAGTTCGT
CGCGGATGAGAACGGCGTGTTGCTCCGGAACAGGGACGACATCCTCCAAC
GGTGGGCGAGATTCTTCAGCACCCTACTCAACACCAAATCCCCCACCCTG
AACCCAGACATCATCGAACGAGTGACGCAGCGGCCAGCGACACGTGACAG
TCAACGGTTGGGAGAGGTGCCAGATCTCGAGGAGGTGGCACGGGCAGCGA
AAGGCCTCAAGAACTGGAAGGCACCCGGCCATGACTCCCTCCCTGCCGAA
TTGCTCAAGATCGATGACGACGAACCCGTTGTCCTGAGACACCTCCATAC
CATCCTCGTCAAGGTGTGGAACGGAGGAGATATCCCCCAAGAGTGGAAGG
ACGCAACCATCAAGGTGCTGTACAAGAAGGGTGACCGGTCCAACTGTAAC
AACTACAGGGGGATTTCGCTACTATCTCACGTAGGCAAGGTTCCCATCAA
GATCATCACCAACCGTCTAAGCGCCTTCTGCGAAGCCAACAACATCCTCC
CGGAGGAACAGTGCGGATTCCGACCCGGGTGATCCACCGTCGACATGCTG
TTTGTCGTGCGTCGCCTCCAGGAGCTGGGCCGGAGAAAGAAAATACCGCT
CTACATGTGCTTCGTCGACTTGAAGAAGGCGTATGATTCGGTGGACCGAG
AGATGCTATGGAAGGTGCTGGCCACGGCCGGGATTCCCGCGAAGCTAATC
AAAGTCATCCGCCAATTCCACGATGGAATGCGGGCCCGGGTGCGCATGGA
CGACGGAGAACTATCGGACTGGTTCTTCGTCACACAGGGTGTGCGACAAG
GATGTGTGCTATCCCCACTGCTGTTCAACATCTTCTTCGCCGAGGTCCTC
GAGGTCGTCGTTATCCGATTCAGCGAGGATGATGTTGTTTTGCGGAATCT
GGTGTGCTGGGAGGAGGGGAAGACGGAAGCGGGGGGGGGGGGAGGAGACA
CCCATTGACCGAGTACGGAGGGCAGTATGGGGGATGCTGTATGCCGATGA
TGCCGGCGTCGTATCGAGGTCTGCAGAAGGACTGGCGAGAATGATGACCA
TCATCGTTGAGGTGTTCGGAGAGTTCGGGCTAAACGGTGTCGGAGAAGAA
GACGGAGACGCTCCTGATGCGCGCGAAGGACAAGCCGACTGCAACATCAC
AGTCCCCCCCGCCTCCTCCTCCACCACTGACTATCGAAGCCGCGGGACAG
AAATACGCCCAGACGACCGAGTTCCGGTACCTCGGTGGCCTCGTCAACGA
ACATGGCGACCTCACCCGGGAGATCAGCTACAGGAGCAGAGGAGCGTGGG
CGTGCCTCAGGCGATATGGCCAGGAGCTCTTCGACAAACCGAAAGCGCCA
TTCCGACTCAAGATCCGCCTCCTCCAGGCGGAGGCGATGGAGGCACTGCT
GTACGGCTGCATGACATGGTCACCACTCAGCGGCCACTATCAGACGCTGC
AGTCGACACACCGCCGACTGCTCCTTCGAGTTATCGGGTACAAGCGCAAG
AAAGACACCTACCGGCAGCTCTCGTACGCCCAGACGCTGAAGAGGGTCGA
ATGCCAGAGCGTTGAAGCCACGATCCGACAACGACGCCTACTGTTCGCGG
GAGCACTGGCAAGGCAGCCGGACGGGCGACTCCCGAAACGACTGATGCTC
GGCGAGCTGGCGGGGGGGGAGAAGCCACGTAGGGGGGGACAGGAACAGAA
CTGGCCGAAGTGTGTGCTCGACGACCTGAAGGCCTTCGGGGCCGACCACG
GATCTACGAAAACCGACCCAAGTTGTCTCGGAATTCCCGTACCGAAAGAC
ACGGCACCGAAGTCAAGGTGGACGGAAGCCGCGAAGGTGGAGGGGGGAGT
ACCCTGGCATGCGGCGGTGCTGCAGGGAGCTGAGAGGTTCATGACCTCCT
GGCACGAGAAGGGAAGAAGAGGTCAGCCGACAACGAGCGCTCAAACGAAA
CCACAAGCCAACAACCAATGGGGCGGGAGGGGGGCAGGAGACGGACGAGA
CGGCGAGGGAAGAAAGCAAACGAGAAGAGACGGACCGAGTGGCACGACAC
GTGCCGGATTGAATTTCTTTTCGCCAATTCCCCCCCCCCCAACGCTGCAC
CATTGCACCAACCCCCCAGTAGTAGTGATTTCGTACCATTACAATGTATC
GCTGGTTGGTGGCCATGTTTGCGTGTTTGCTTGTTCGTTAGTGGTCTCTC
CACCGTGTGCCTTGTTCTGCCTCATACTTCCTGTTATTTTCGGCCTGGTC
CCTCTTTGTCCTCGCCCTTTTTTTCATTTTTTCATTTTATTTTCATTTAT
TTTCTCTTCTCCTTACGGTTTCCATTTTTATTTTTTCTCCTTTTTTTTCT
CTTTGTCCTTTTTTGTTTTTTTTATGTTCTCTTTTTTTCTCTCTTTTTCT
GTGCCAGATGGACTTGTCTCTGCTTGCGTTGTGAAGTACCAAGATTGAAC
CAAGGGAGTGTGCCTCTTTCTCTCCGGCCCATGATAGATAGTGACTGCTA
ATCTCAGTTGATACCCCGCATAGCGTGAAGAGGGAGCGGAGGATCCCAGA
ATATCTGTCGTTGATTTCTATTGACTTGCGGACCCCTCGGGGACAGTATA
TTGGAGTGTACCTTTTTAGGGTAAGTTAACCTGTGACCACGGGAATCG
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Coding sequence (CDS) from alignment at chr_00:4675723..4682270+

>Ec-00_003960.4 ID=Ec-00_003960.4|Name=Ec-00_003960.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1332bp|location=Sequence derived from alignment at chr_00:4675723..4682270+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGCGCGAAGGACAAGCCGACTGCAACATCACAGTCCCCCCCGCCTCC
TCCTCCACCACTGACTATCGAAGCCGCGGGACAGAAATACGCCCAGACGA
CCGAGTTCCGGTACCTCGGTGGCCTCGTCAACGAACATGGCGACCTCACC
CGGGAGATCAGCTACAGGAGCAGAGGAGCGTGGGCGTGCCTCAGGCGATA
TGGCCAGGAGCTCTTCGACAAACCGAAAGCGCCATTCCGACTCAAGATCC
GCCTCCTCCAGGCGGAGGCGATGGAGGCACTGCTGTACGGCTGCATGACA
TGGTCACCACTCAGCGGCCACTATCAGACGCTGCAGTCGACACACCGCCG
ACTGCTCCTTCGAGTTATCGGGTACAAGCGCAAGAAAGACACCTACCGGC
AGCTCTCGTACGCCCAGACGCTGAAGAGGGTCGAATGCCAGAGCGTTGAA
GCCACGATCCGACAACGACGCCTACTGTTCGCGGGAGCACTGGCAAGGCA
GCCGGACGGGCGACTCCCGAAACGACTGATGCTCGGCGAGCTGGCGGGGG
GGGAGAAGCCACGTAGGGGGGGACAGGAACAGAACTGGCCGAAGTGTGTG
CTCGACGACCTGAAGGCCTTCGGGGCCGACCACGGATCTACGAAAACCGA
CCCAAGTTGTCTCGGAATTCCCGTACCGAAAGACACGGCACCGAAGTCAA
GGTGGACGGAAGCCGCGAAGGTGGAGGGGGGAGTACCCTGGCATGCGGCG
GTGCTGCAGGGAGCTGAGAGGTTCATGACCTCCTGGCACGAGAAGGGAAG
AAGAGGTCAGCCGACAACGAGCGCTCAAACGAAACCACAAGCCAACAACC
AATGGGGCGGGAGGGGGGCAGGAGACGGACGAGACGGCGAGGGAAGAAAG
CAAACGAGAAGAGACGGACCGAGTGGCACGACACGTGCCGGATTGAATTT
CTTTTCGCCAATTCCCCCCCCCCCAACGCTGCACCATTGCACCAACCCCC
CAGTAGTAGTGATTTCGTACCATTACAATGTATCGCTGGTTGGTGGCCAT
GTTTGCGTGTTTGCTTGTTCGTTAGTGGTCTCTCCACCGTGTGCCTTGTT
CTGCCTCATACTTCCTGTTATTTTCGGCCTGGTCCCTCTTTGTCCTCGCC
CTTTTTTTCATTTTTTCATTTTATTTTCATTTATTTTCTCTTCTCCTTAC
GGTTTCCATTTTTATTTTTTCTCCTTTTTTTTCTCTTTGTCCTTTTTTGT
TTTTTTTATGTTCTCTTTTTTTCTCTCTTTTTCTGTGCCAGATGGACTTG
TCTCTGCTTGCGTTGTGAAGTACCAAGATTGA
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Synonyms
The feature 'Ec-00_003960.4' has the following synonyms
Synonym
Esi299_0049
Esi_299_0049