Ec-00_003920.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003920.1
Unique NameEc-00_003920.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length472
Homology
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BLAST of Ec-00_003920.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI)

HSP 1 Score: 873 bits (2255), Expect = 0.000e+0
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 1 
Query:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMYRKATKGNAAKEDAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMYRKATKGNAAKEDAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY
Sbjct:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMYRKATKGNAAKEDAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 471
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 5.820e-76
Identity = 191/494 (38.66%), Postives = 282/494 (57.09%), Query Frame = 1 
Query:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESS-TELNSGTQTTDALDDLS------ADMYRKATKGNAAKEDAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALR----------------REMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            MA++F  S KAP L I+  ED M+   ++C  +G + M Q  LK L  +P+ H+ALAVK+ + M +  RN A SK MQEIAVPG+IK+ E A+   +G    PH WK  +YYTTLG+G +  +TFM+ P  + TKFK+ K +YT+   LW DT+ +++ +EL SGT T D+L++L+      +DMY++     A  + A A++     R +A  V  +G    SP  +P   AXXXXXXXXXXXXXXXXXXX                               RE       G   G + G     E++P+ + +P+LLL   +S WSG  PSEWKHL +S GP  +   GD            V +  +NP+ SP  M  +N NGDA+SR     + ++ K++  ++ +E      R EAL T+K+GLAA+E+ANTH+  + +N+K+MV+L+E   +  +R++KI+ALE+K+ML + D    +A+L  LL+E+
Sbjct:  105 MAVDFPKSQKAPMLPINRPEDFMFALRKFCGTYGNKTMTQPALKMLPSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQMPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTR-VWLWLDTNDKNTPSELPSGTNTQDSLEELNDAMWFESDMYKR---DKARSDKAGAEVADFLSRGAAGSVDAAG----SPAGSPVTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQEREQDKGGDEGKHEG-----EEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGGD------------VTVDSENPVCSPAVMSRLNPNGDALSR-----SSRRGKQRPTRNFQE-----TRKEALKTKKKGLAALEAANTHIETIGANMKRMVELKEAEAVGIKRENKIKALEKKIMLRLGDETENRAELEFLLNEF 563
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 5.040e-40
Identity = 80/187 (42.78%), Postives = 123/187 (65.78%), Query Frame = 1 
Query:  853 DIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            ++P+ + +P+LLL   +S WSG  PSEWKHL +S GP  +   GD            V +  +NP+ SP  M  +N NGDA+SRRQ+FA IK+EKEQ +K A +K       EAL+T+K+GLAA+E+A+TH+  + +N+K+MV+L+E   +  +RK++I+ LE+K+ML + D    +A+L  LL+E+
Sbjct:   30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGGD------------VTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAEAVGIKRKNRIKVLEKKVMLRLGDETENRAELEFLLNEF 204
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 6.330e-36
Identity = 82/186 (44.09%), Postives = 119/186 (63.98%), Query Frame = 1 
Query:  856 IPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            +P+ + +P+LLL   +S WSG  PSEWKHL +S GP  +    D            V +  +NP+ SP  M  +N NGDA+SRRQ+FA IK+EKEQ  K A EKE    R E L+T+K GLAA E+ANTHV  + +++K+MV+L+E   +  +R++KI+ALE+K++L + D    +A+L  LL E+
Sbjct:  137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGAD------------VTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLETKK-GLAAFEAANTHVETIGADMKRMVELKEAEAVGIKRENKIKALEKKIVLRLGDETENRAELVFLLIEF 309
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 8.230e-35
Identity = 79/186 (42.47%), Postives = 120/186 (64.52%), Query Frame = 1 
Query:  853 DIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDE 1410
            ++P+ + +P+LLL   +S WSG  PSEWKHL +S G   + + GD            V +  +NP+ SP  M  +N NGDA+SRRQ+FA IK+EKE+ +K A +KE       AL+T+K G AA+E+ANTHV  + +N+K+MV+L+E   +  +R++KI+ALE+ +ML + D    +A+L  LL+E
Sbjct:  120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGGD------------VTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALETKK-GPAALEAANTHVDSIGANMKRMVELKEAEAVGIKRENKIKALEKIIMLRLGDETENRAELEFLLNE 292
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 4.940e-28
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1 
Query:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTG 354
            MA++F  S KAP L I+L+ED M+   ++C  +G + M Q  LK LQ +P+ H+ALAVK+ + M +  RN A SK MQEIAVPG+IK+ E A+    G L  PH WK  +YYT+LG+G
Sbjct:    1 MAVDFPKSQKAPMLPINLSEDFMFALRKFCGTYGNKTMTQPALKMLQSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSIMGGPLQMPHKWKVMVYYTSLGSG 118
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.570e-25
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1 
Query:  853 DIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTH 1245
            ++P+ + +P+LLL   +S WSG  PSEWKHL +S GP  +   GD            V +  +NP+ SP  M  ++ NGDA+SRRQ+FA IK+EKEQ +K   +KE    R E L+T+K+GLAA+E+ANT+
Sbjct:  117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGD------------VNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAANTN 235
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5JVT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT0_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.480e-21
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 
Query:    1 MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDS---QGELVFPHGWKDALYYTTLG 348
            MA+N ++S +AP L ++LT D+M  F  +C  +GG    Q   KALQC PIA A LAVK+ E    +VR+  +S+  QEIA+PGWIK+C  AI +S      L FP G +  LY+ TLG
Sbjct:    1 MALNLEVSNRAPALPVELTNDLMDSFGIFCATYGGTPRGQQSQKALQCFPIAWACLAVKEAEKKSKEVRDRDVSRCYQEIALPGWIKLCHRAITESAESDNPLRFPAGLESKLYFPTLG 119
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 6.640e-20
Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 
Query:  853 DIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRK----------RGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            ++P+ + +P+LLL   +S WSG  PSEWKHL +S GP  +   GD            V +  +NP+ SP                             +K A +KE    R EAL+T+K          +GLAA+E+ANTH+  + +N+K+MV+L++   +  +R++KI+ALE+++ML + D    +A+L  L +E+
Sbjct:  105 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGD------------VTVDSENPVCSPAE---------------------------RKAATDKELQEARKEALETKKXXXXXXXXXKKGLAALEAANTHIETIGANMKRMVELKQAEAVGIKRENKIKALEKRIMLRLGDETENRAELEFLPNEF 262
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BLAST of Ec-00_003920.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.250e-16
Identity = 50/131 (38.17%), Postives = 81/131 (61.83%), Query Frame = 1 
Query: 1021 EVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDEY 1413
            +V +  +NP+ SP  M  +N NGDA+SRRQ+FA IK+E+E  +K A +KE                   ++ANTHV  + +N+K+MV+L+E   +  +R++KI+ALE+K+ L + D    +A+L  LL+E+
Sbjct:   53 DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE-------------------QAANTHVETIGANMKRMVELKEAEAVGIKRENKIKALEKKIRLRLGDGTENRAELEFLLNEF 164
The following BLAST results are available for this feature:
BLAST of Ec-00_003920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FV02_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXM3_9PHAE5.820e-7638.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6E0_9PHAE5.040e-4042.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTM3_9PHAE6.330e-3644.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJW8_9PHAE8.230e-3542.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFH5_9PHAE4.940e-2849.15Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF1_9PHAE2.570e-2545.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVT0_9PHAE1.480e-2146.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7S4_9PHAE6.640e-2031.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE63_9PHAE1.250e-1638.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4459259..4462342 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1416
Hectar predicted targeting categoryother localisation
Gene idEc-00_003920.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003920Ec-00_003920Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4459259..4462342 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003920.1.3Ec-00_003920.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4459259..4460216 -
Ec-00_003920.1.2Ec-00_003920.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4461133..4461238 -
Ec-00_003920.1.1Ec-00_003920.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4461991..4462342 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003920.1CDS:Ec-00_003920.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4459259..4460216 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003920.1Ec-00_003920.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4459259..4462342 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003920.1 ID=Ec-00_003920.1|Name=Ec-00_003920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=472bp
MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVP
IAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGEL
VFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLW
FDTHPESSTELNSGTQTTDALDDLSADMYRKATKGNAAKEDAAADIFFNT
PRRSAEGVVVSGVTTTSPLPTPAADAAIAATTSTGAAAAADDDDDTSPQA
LARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACP
WSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPI
GSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALD
TRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKL
MLAISDPNMVKAQLNALLDEY*
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spliced messenger RNA

>Ec-00_003920.1 ID=Ec-00_003920.1|Name=Ec-00_003920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1416bp|location=Sequence derived from alignment at chr_00:4459259..4462342- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGATCAACTTTGATATCTCGATGAAGGCGCCTCCTCTCAACATAGA
CCTGACCGAGGACATGATGTGGGGTTTTCACCGCTACTGCGACAAGTTCG
GTGGGAGGAAGATGAACCAGGCGGGATTGAAAGCGCTACAGTGCGTGCCC
ATCGCGCACGCTGCGCTGGCGGTCAAGCAAGGGGAGGACATGAAGTCGGA
CGTTCGCAACGCTGCTATGTCGAAAAGAATGCAGGAGATCGCAGTCCCCG
GTTGGATCAAGGTCTGCGAGGCGGCGATCAAGGACAGCCAGGGGGAACTT
GTGTTCCCGCACGGCTGGAAGGATGCCCTCTACTACACCACACTAGGCAC
AGGGGAAAACCCCAGGCAAACCTTCATGAAGAACCCCAAGGCACTGTTCA
CGAAGTTCAAGGCCCTGAAAACAGAATATACGAAGGGAGCGCAGCTTTGG
TTCGACACTCATCCCGAGAGCAGTACCGAGTTGAATTCCGGTACCCAGAC
GACGGACGCGCTCGACGACCTGTCCGCCGACATGTACCGCAAGGCCACCA
AGGGCAACGCTGCGAAGGAAGATGCCGCCGCCGACATATTTTTCAACACT
CCACGACGTAGTGCAGAAGGAGTGGTCGTTTCCGGAGTCACGACTACCTC
GCCCCTTCCAACGCCAGCTGCGGATGCTGCCATAGCCGCCACCACCTCTA
CGGGGGCCGCCGCCGCCGCCGACGACGACGACGACACCTCCCCCCAGGCT
CTCGCCAGGCGGGCCGCCGAAGCCCTCCGTCGAGAGATGGCGTCACCTAC
AGCCTCGGGTTCCGGTTCTGGCGCAAATCTCGGTCGGCCAGAAGGCAACG
AGGATATACCGGACGACTACTACTACCCCTACCTCCTTCTGGCGTGTCCT
TGGAGCTCGTGGAGTGGCAACACCCCCTCCGAGTGGAAGCACCTCGCAGC
ATCGAGCGGGCCGCGGAACCGCGCCAGCAAGGGCGACAAGGGCAACTCCA
ACGGCAACGACAACAGTAACGAGGTCGTCATCACCGACGACAACCCTATC
GGCAGCCCCAGAGCAATGGGTCTGATGAACGCAAACGGCGACGCCGTGAG
TCGCCGCCAGTATTTCGCCAACATCAAGAAGGAGAAAGAACAGGTCAAGA
AGGATGCCAAGGAGAAAGAAAACGTTGCGCTGAGGAACGAGGCGCTCGAC
ACGAGGAAGAGGGGCTTGGCCGCGATGGAATCGGCCAACACCCACGTCGG
GGAGCTGTCGTCCAACATCAAGAAGATGGTGCAGCTCCAGGAGGAGTCCA
ACCTTGCGGCCAGGAGGAAGGATAAAATAGAGGCGCTGGAGAGGAAGCTC
ATGCTGGCCATCTCTGATCCGAACATGGTGAAGGCGCAGCTCAATGCCTT
GCTCGATGAGTATTAA
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protein sequence of Ec-00_003920.1

>Ec-00_003920.1 ID=Ec-00_003920.1|Name=Ec-00_003920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=472bp
MAINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVP
IAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGEL
VFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLW
FDTHPESSTELNSGTQTTDALDDLSADMYRKATKGNAAKEDAAADIFFNT
PRRSAEGVVVSGVTTTSPLPTPAADAAIAATTSTGAAAAADDDDDTSPQA
LARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACP
WSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPI
GSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALD
TRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKL
MLAISDPNMVKAQLNALLDEY*
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mRNA from alignment at chr_00:4459259..4462342-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003920.1 ID=Ec-00_003920.1|Name=Ec-00_003920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3084bp|location=Sequence derived from alignment at chr_00:4459259..4462342- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGATCAACTTTGATATCTCGATGAAGGCGCCTCCTCTCAACATAGA
CCTGACCGAGGACATGATGTGGGGTTTTCACCGCTACTGCGACAAGTTCG
GTGGGAGGAAGATGAACCAGGCGGGATTGAAAGCGCTACAGTGCGTGCCC
ATCGCGCACGCTGCGCTGGCGGTCAAGCAAGGGGAGGACATGAAGTCGGA
CGTTCGCAACGCTGCTATGTCGAAAAGAATGCAGGAGATCGCAGTCCCCG
GTTGGATCAAGGTCTGCGAGGCGGCGATCAAGGACAGCCAGGGGGAACTT
GTGTTCCCGCACGGCTGGAAGGATGCCCTCTACTACACCACACTAGGCAC
AGGTGCGCCCCATTGAAGCATGTGCGGTCGGGGGGATAGTGGAGATCATT
GGGGTACGACGGTAGCTAGATCTTGGTTGTTTATGTTGCGTGTTTAAAAA
GGGCGCAAATGCTGAGTGGAAAATACGGGGAATATAGCTTGTTGTTGTCT
GGTACGACTGCTGTGCTGCTGTAAACCCAACGGCTTTCGTAGCATATCAA
CGTGCATGCACTGTGACAGGGTCGTGGTTCAATAATGTACTGCTGTCATC
ACTAGAAGCAGCGGCAGTACAAAACAACACGAGGAAGTCGGTACCTATAT
GGGCTGTTTTGCTTCGGGTTGGGGTTAGGAACTTGTCGTATAAGGCGTGA
CTCATGATGTTGGTGCCGTACCTTTTTTTGAAAAAAATATTCTTGCATTC
GTCTAAAACTTGTACTTGAAGTACCGGTACTATTTTCAATGAAGTACAAA
ACAGCAATGGTGGGCGGTAGTTGTCTCTCCCTTCACCCCGATCGTGGGTG
TAGATTGTATCGACGTTTCGCAGTACCACTCGGGATGTCTATATTCTAGG
TTGTATTTCAACAGATGGTTAGACCCCAATAAACACAGCAACTCATCATA
CCGCTGTACGAGCAAGCGTGTTGCGCCGATGCACAATTTTGTGCACGGTA
AAATGCCAGCAAGTACATTACGCACATCTACGGTGAACGCCAACACTCTG
AGCATGTACCCTCTTCCTTTCTTTGTGATGCGTAACGTGGGCACGTGTTG
GCAGGGGAAAACCCCAGGCAAACCTTCATGAAGAACCCCAAGGCACTGTT
CACGAAGTTCAAGGCCCTGAAAACAGAATATACGAAGGGAGCGCAGCTTT
GGTTCGACACGTGAGTACGGCATGCTCGCGCAACCTTTAGCCTAATCCTT
GGGCGACCAATCAGTACGGTCGCCTCCTCTGTTTGATACCCAGATTGTGT
TCGTACTCCGAATAGAGACTGGTCCTGGAACAAGCGTCGTTGTGATTGGA
TGGAGGAGGAAATTGGAAATTGCCCCCCCGCCCCCCGCGGTGGTCGAGTA
CGTTGTGTTTGCGGGATCGAGAACCCTCACTCCGCTCAAAGGGAATAATC
GCACGCTGTGCTAATTTGGTCAAGCACCCTTGAGGCAGATACACAGCGCT
TCCAACTGTCTCTGGAAGTGAAAGCACCAGAAAACAAATTAAGTCATACG
CAGCTGTCATCGGTACGCAAGGAAGCACAAGATGCCGAACACCCCTAGCA
GGATGCAGCGCACCCTTCATGCGACTCGCAGAATACCTCACGGTGCTTCG
CGCTTGGTGATGTGAGAGTCTGGTCCGGTGAAAACCCGGCGTGCTCCGTC
CCGGCTTTGTATGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCAC
GACTATGAGTACACCCCCCCCCCTAGCGAGGACGCGTGGTCAATTATCTA
ACAGGTAAGGCTTTAACGACAGACACCCGGACGACCCCCCCTCCCCCCCC
ATGCAACTTGTTGGAGGTGGTGTCGGGGTCACGCCATTACACGAAAGCCT
GCCCCCCTTGCCCCTCTATTTTCTCCAAGCCCAAGTAGATAACGGGCACA
CGACCGCGTGGGTATTGTGCACGCAAGAATTTGTGGTTGAGCGATTACCA
TCCGATTGCAACGCACAGACCACCGCAATAAAAGACCACGACGATGATTC
CTCTCTTGTTGACCTGCTCCCGTCCCCCGTCCATCCTTCTTCGCACCCGG
TCCCTCCCTACGTTATATTTTTGCAGTCATCCCGAGAGCAGTACCGAGTT
GAATTCCGGTACCCAGACGACGGACGCGCTCGACGACCTGTCCGCCGACA
TGTACCGCAAGGCCACCAAGGGCAACGCTGCGAAGGAAGATGCCGCCGCC
GACATATTTTTCAACACTCCACGACGTAGTGCAGAAGGAGTGGTCGTTTC
CGGAGTCACGACTACCTCGCCCCTTCCAACGCCAGCTGCGGATGCTGCCA
TAGCCGCCACCACCTCTACGGGGGCCGCCGCCGCCGCCGACGACGACGAC
GACACCTCCCCCCAGGCTCTCGCCAGGCGGGCCGCCGAAGCCCTCCGTCG
AGAGATGGCGTCACCTACAGCCTCGGGTTCCGGTTCTGGCGCAAATCTCG
GTCGGCCAGAAGGCAACGAGGATATACCGGACGACTACTACTACCCCTAC
CTCCTTCTGGCGTGTCCTTGGAGCTCGTGGAGTGGCAACACCCCCTCCGA
GTGGAAGCACCTCGCAGCATCGAGCGGGCCGCGGAACCGCGCCAGCAAGG
GCGACAAGGGCAACTCCAACGGCAACGACAACAGTAACGAGGTCGTCATC
ACCGACGACAACCCTATCGGCAGCCCCAGAGCAATGGGTCTGATGAACGC
AAACGGCGACGCCGTGAGTCGCCGCCAGTATTTCGCCAACATCAAGAAGG
AGAAAGAACAGGTCAAGAAGGATGCCAAGGAGAAAGAAAACGTTGCGCTG
AGGAACGAGGCGCTCGACACGAGGAAGAGGGGCTTGGCCGCGATGGAATC
GGCCAACACCCACGTCGGGGAGCTGTCGTCCAACATCAAGAAGATGGTGC
AGCTCCAGGAGGAGTCCAACCTTGCGGCCAGGAGGAAGGATAAAATAGAG
GCGCTGGAGAGGAAGCTCATGCTGGCCATCTCTGATCCGAACATGGTGAA
GGCGCAGCTCAATGCCTTGCTCGATGAGTATTAA
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Coding sequence (CDS) from alignment at chr_00:4459259..4462342-

>Ec-00_003920.1 ID=Ec-00_003920.1|Name=Ec-00_003920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1416bp|location=Sequence derived from alignment at chr_00:4459259..4462342- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGATCAACTTTGATATCTCGATGAAGGCGCCTCCTCTCAACATAGA
CCTGACCGAGGACATGATGTGGGGTTTTCACCGCTACTGCGACAAGTTCG
GTGGGAGGAAGATGAACCAGGCGGGATTGAAAGCGCTACAGTGCGTGCCC
ATCGCGCACGCTGCGCTGGCGGTCAAGCAAGGGGAGGACATGAAGTCGGA
CGTTCGCAACGCTGCTATGTCGAAAAGAATGCAGGAGATCGCAGTCCCCG
GTTGGATCAAGGTCTGCGAGGCGGCGATCAAGGACAGCCAGGGGGAACTT
GTGTTCCCGCACGGCTGGAAGGATGCCCTCTACTACACCACACTAGGCAC
AGGGGAAAACCCCAGGCAAACCTTCATGAAGAACCCCAAGGCACTGTTCA
CGAAGTTCAAGGCCCTGAAAACAGAATATACGAAGGGAGCGCAGCTTTGG
TTCGACACTCATCCCGAGAGCAGTACCGAGTTGAATTCCGGTACCCAGAC
GACGGACGCGCTCGACGACCTGTCCGCCGACATGTACCGCAAGGCCACCA
AGGGCAACGCTGCGAAGGAAGATGCCGCCGCCGACATATTTTTCAACACT
CCACGACGTAGTGCAGAAGGAGTGGTCGTTTCCGGAGTCACGACTACCTC
GCCCCTTCCAACGCCAGCTGCGGATGCTGCCATAGCCGCCACCACCTCTA
CGGGGGCCGCCGCCGCCGCCGACGACGACGACGACACCTCCCCCCAGGCT
CTCGCCAGGCGGGCCGCCGAAGCCCTCCGTCGAGAGATGGCGTCACCTAC
AGCCTCGGGTTCCGGTTCTGGCGCAAATCTCGGTCGGCCAGAAGGCAACG
AGGATATACCGGACGACTACTACTACCCCTACCTCCTTCTGGCGTGTCCT
TGGAGCTCGTGGAGTGGCAACACCCCCTCCGAGTGGAAGCACCTCGCAGC
ATCGAGCGGGCCGCGGAACCGCGCCAGCAAGGGCGACAAGGGCAACTCCA
ACGGCAACGACAACAGTAACGAGGTCGTCATCACCGACGACAACCCTATC
GGCAGCCCCAGAGCAATGGGTCTGATGAACGCAAACGGCGACGCCGTGAG
TCGCCGCCAGTATTTCGCCAACATCAAGAAGGAGAAAGAACAGGTCAAGA
AGGATGCCAAGGAGAAAGAAAACGTTGCGCTGAGGAACGAGGCGCTCGAC
ACGAGGAAGAGGGGCTTGGCCGCGATGGAATCGGCCAACACCCACGTCGG
GGAGCTGTCGTCCAACATCAAGAAGATGGTGCAGCTCCAGGAGGAGTCCA
ACCTTGCGGCCAGGAGGAAGGATAAAATAGAGGCGCTGGAGAGGAAGCTC
ATGCTGGCCATCTCTGATCCGAACATGGTGAAGGCGCAGCTCAATGCCTT
GCTCGATGAGTATTAA
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Synonyms
The feature 'Ec-00_003920.1' has the following synonyms
Synonym
Esi0284_0036
Esi_0284_0036