Ec-00_003130.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_003130.1
Unique Name	Ec-00_003130.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	374

Homology

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D7FP04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP04_ECTSI)

HSP 1 Score: 598 bits (1542), Expect = 1.190e-213
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1

Query:    1 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGEMTSRERRK 1119
            MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGEMTSRERRK
Sbjct:    1 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGEMTSRERRK 373

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 4.470e-203
Identity = 365/366 (99.73%), Postives = 366/366 (100.00%), Query Frame = 1

Query:    1 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGEM 1098
            MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGE+
Sbjct:  304 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGEV 669

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.170e-48
Identity = 178/386 (46.11%), Postives = 229/386 (59.33%), Query Frame = 1

Query:    1 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATT--------------PAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVEAAASGGGAAATLNTS--QPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGPKPAS------SAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAG 1092
            MAAG++G+M++ G T+GSW    NLG++DFL VM NT + T              PAP+         PT  P   +A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SAS TAP++AG +S  A  AL  +G   +RR+AAK  G+      ++P  G +DG +H    ++   ++   +  ++ +N+ PP  H K VE   +G   + ++++S  Q     +  GV       +D LA+Q    A  STA  ST +RA +AGI  E    +AD P PAS      S AGRRGS  DVGVG+AVM AAQELA RCQ+PGVSEA  +VSILVNLV DSRD ++ GD+ L+QCRS+VM L RA  VAG
Sbjct:  164 MAAGSNGRMLMVGNTNGSWIGDPNLGSEDFLLVMFNTTSLTXXXXXXXXXXXARSPAPALQVILPSTTPTTLPIPTSAXSPGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGTSPGGESASGTAPVVAGVVSAIAAAALITLGVWYKRRQAAKNMGSG----RLVPPPGDDDGLEHGREYNRQQGVEPAASAVVYSDNNQPPHPH-KPVEVVTAGKAPSGSVSSSTEQSTRMPEGPGVRFPGVGTKDVLAQQSLTTAG-STAVVSTSERAELAGISTENTGRFADEPMPASGEREASSTAGRRGSFGDVGVGQAVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAG 543

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BLAST of Ec-00_003130.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.210e-28
Identity = 112/284 (39.44%), Postives = 150/284 (52.82%), Query Frame = 1

Query:  337 GSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPL---DGLEDGRQHEVSL---SKSAVI---DGGGNPTLHQENHSPPANHVKSVEAAASGG----GAAATLNTS-QPI-----DAGKVAGVAL-ADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGEEAEFWADGP-----KPASSAAGRRGSCS--------DVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVA 1089
            GSAS + PI+AG +S  A VAL  +  LL+RRR + +         V P    D +E GR+    +   S  AV+   DG  +   HQ N S   +    V+A  SGG     A A L+   QP      +A +  G  L +DGSAE ++A    + ATTSTA+ ST +R  ++     E E     P     KP  ++ G  G+ S        D+G+GR V+ AAQELA  CQIPGVSEAA  V ++ NLVTDSRD+     + L+QC +VVMAL+RAA VA
Sbjct:  201 GSASGSTPIVAGIVSAVAGVALITLAVLLKRRRGSNQKMTLTSAVPVPPTHDDDNVEQGREEPPDVRPPSYPAVVAVGDGNDHSPSHQRNASLFGHTPAEVDAVDSGGIVPPSAPAALDGQVQPSAEHAENAAEGCGARLTSDGSAEKFVAATTAITATTSTANLSTAERDELSQFHQRERERVVAAPVSGEPKPEEASGGGTGASSAADHQNSADIGLGRVVLAAAQELAHHCQIPGVSEAATAVCMMANLVTDSRDNARASQSRLRQCSTVVMALKRAAKVA 484

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.450e-27
Identity = 133/385 (34.55%), Postives = 175/385 (45.45%), Query Frame = 1

Query:    1 MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIA---TTPAPSSPGGDTVGGPTAAPSTPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDGLEDGR----QHEVSLSKSAVIDGGGNPTLHQENHSPPANHVKSVE----AAASGGGAAATLNTSQPIDAG-KVAGVALADGSAEDYLAKQHFVVATTSTADASTL--DRAAVAGIFGEEAEFWAD------GPKPASSAAGRRGSC-SDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAG 1092
            MAAG+DG+M++ G  +GSW    NLG++DFL V+LNT     +TP  +SP   TV   + AP+TPA A                       XXXXX                  D SA S  PI+AGA+S  A     A+    +R + AK        P +   D  E GR    Q         V+ GG N   H      P   V  VE    A+ +  G +A+ +T Q         GVA      E   A Q      T+T+  +TL  +RA    +  +    +AD      G    S     R S  + VG G+AV+  AQELA  CQ+PGVSE A +VS+LVNLVTDS D+N   D  L+QCRS+++ L RA  VAG
Sbjct:  336 MAAGSDGRMVMVGSINGSWGGEPNLGSEDFLVVLLNTSTLDTSTPPTTSP---TVA-LSPAPATPAHAFPPSDTPVELPAPTLAPSVRSSSXXXXXGGISSTVDSLDVLS---GDESAPSPTPIVAGAVSAVAAAIFIALAIWYKRWQRAKGMKTGSVVPPISNDDNFEHGREGDNQQGAKQHAPTVVHGGNNQPPHMRK---PIEVVAGVEGMAVASEAAPGGSASRSTEQAAQTRMNTRGVAFPCVVEEAISADQSL----TTTSSTTTLPGERADTTAVSRKGTPHFADDHILVSGKGETSQTDSHRASVVTSVGGGQAVLLLAQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAG 706

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BLAST of Ec-00_003130.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.610e-23
Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 1

Query:  679 KVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRA-------------AVAGIFGEEA-EFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAG---EMTSRERR 1116
            K++ +AL  G+ +D  A +  + AT ST D ST +RA             +VA + GE A E   +G   ASSA GRRGS   +G+  AVM AA+ LA  CQIPGVSEAA++VS LV LV+DSRD  + GD+ L+QCRS+V  LERA+ VAG   E T+ E+R
Sbjct:  649 KISPLALGSGNIKDGAANKSSLTATVSTVDMSTAERAELGQFDEKQQSAASVASVDGESAPEVLGEGI--ASSATGRRGSRGGIGLREAVMQAAENLAYHCQIPGVSEAASVVSTLVMLVSDSRDIKSGGDSNLRQCRSIVRILERASKVAGRGGETTTAEQR 809

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.810e-21
Identity = 101/298 (33.89%), Postives = 145/298 (48.66%), Query Frame = 1

Query:  331 SDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDG-LEDGRQHEVSLSKSAVI---DGGGN---PTLHQENHSPP----ANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTA-----DASTLDRAAVAGIFGE-----EAEFWADGPKPA----------------------SSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGE 1095
            S GS S + PI+AG +S  A  A  A+  L +RRR  ++  A        P  G LE G       S +A +   +GG +   P+      SPP    A  V   +        A  L   +   A  + G    +GSA    + +     TTSTA     + ST +RA +A +F +     EA   A G +P                       SSAA R+ S  D+G+G AV+ AAQELA+ CQ+PG+SEAAA++ I+ NL TD+R+++ + D+ L+QCRS+VMAL+RA  V G+
Sbjct:  363 SKGSTSDSTPIVAGVISAVAGAAFIALAVLGKRRRDTRQKAAQPRSDPPAPGGGNLEQGLGPVPPPSYTAALALANGGDDDKWPSAQHNEASPPPFAPAEGVGDGDIVPRSAPTAVVLGAVEDRIAAGLGG----EGSAAVLPSAEKSTTDTTSTATHSTANVSTHERAELA-VFQQRQDVLEAAPVASGSRPVPASGSSGGVGGVDVGVGGARETSSAADRQNSAEDLGLGHAVLGAAQELARHCQVPGISEAAAVLCIMANLFTDNRENDRENDSRLRQCRSIVMALKRAEKVVGK 655

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.820e-21
Identity = 70/144 (48.61%), Postives = 92/144 (63.89%), Query Frame = 1

Query:  670 DAGKVAGVALADGSAEDYLAKQHFVVATT--STADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGE 1095
            DAG+  G A+ DG     +A+Q  +  TT  ST D ST +R A    FG   +  AD P  A++ AGRR + S VG G+AV+ AA+ELA  CQIPG+SEAA  VSIL++LV D+ D  +   A +K+CRS+VM LERAA V G+
Sbjct:  572 DAGEGGGDAVEDGDGCVAVAEQSLLPLTTTNSTNDVSTEERTAEVAGFGFSVDEGADDPPSAAAPAGRRQTPSGVGYGQAVLAAAEELAHHCQIPGISEAATAVSILIHLVVDTEDLTSS--AGVKRCRSIVMMLERAAKVLGK 713

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BLAST of Ec-00_003130.1 vs. uniprot
Match: D7FLN5_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 7.010e-20
Identity = 74/135 (54.81%), Postives = 86/135 (63.70%), Query Frame = 1

Query:  700 ADGSAEDYL-AKQHFVVATTSTADASTLDRAAVAG--IFGEEAEFWADGPKPASSAAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGE 1095
            A G AE  L  +Q  + AT STA+ ST +R  +AG  I  E      DG  P S    RR S   VG G+AVM AAQELAQ CQIPGVSEAA  VSILV LV+DSRD   +GDA +K+CRS+VM LE AA V G+
Sbjct:   41 AGGGAEVGLPTEQSPLHATNSTANVSTGERNDLAGTAIPPENDPVPGDGGAP-SMVGARRTSDGGVGYGQAVMAAAQELAQHCQIPGVSEAATAVSILVRLVSDSRDYAVRGDAGVKRCRSIVMMLELAAKVLGK 174

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BLAST of Ec-00_003130.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 8.630e-20
Identity = 98/288 (34.03%), Postives = 137/288 (47.57%), Query Frame = 1

Query:  331 SDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKNGADGEDPHVLPLDG-LEDGRQHEVSLSKSAVI---DGGGN---PTLHQENHSPP----ANHVKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVATTSTADASTLDRAAVAGIFGE-----EAEFWADGPKPASS-----------------AAGRRGSCSDVGVGRAVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCRSVVMALERAATVAGE 1095
            S GS S + PI+AG LS  A VAL A+  L +RRR  ++  A        P  G LE G       S +A +    GG +   P+      SPP    A  V   +           L+ ++   A K+ G   A  SA              STA+ S+ +R  +  +F +     EA   A G +PA +                 AA R  S  D+G+G AV+ AAQELA  CQ+PG+SEAA ++ I+ NL TD+R+++   D+ LKQCRS+VMAL+RA  V G+
Sbjct:  385 SKGSTSDSTPIVAGVLSAVAGVALIALAALGKRRRDKRQETAQPRSDPPAPGGGNLEQGLGPVPPPSYTAALAFAKGGDDDKWPSAQNNEASPPPYAPAEGVGGGDIVPQSAPKQVVLDAAEDRGAAKLGGEGSAAASAXXXXXXXXXXX-XHSTANVSSHERVELE-VFQQRQGVLEAAPVASGSRPAPASGNSXXXXXXXXXXXXXAADRPNSSDDLGLGHAVLGAAQELAHHCQVPGISEAAGVLCIMANLFTDNRENDRANDSRLKQCRSIVMALKRAEKVVGK 670

The following BLAST results are available for this feature:

BLAST of Ec-00_003130.1 vs. uniprot

BLAST of Ec-00_003130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
D7FP04_ECTSI	1.190e-213	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LAU1_ECTSI	4.470e-203	99.73	PEGA domain family protein n=1 Tax=Ectocarpus sili...	[more]
D8LRE9_ECTSI	3.170e-48	46.11	Transmembrane receptor kinase n=2 Tax=Ectocarpus s...	[more]
A0A6H5JSI8_9PHAE	1.210e-28	39.44	Protein kinase domain-containing protein n=1 Tax=E...	[more]
D8LHV1_ECTSI	1.450e-27	34.55	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A6H5KY76_9PHAE	1.610e-23	47.85	Protein kinase domain-containing protein n=1 Tax=E...	[more]
D7G7X7_ECTSI	1.810e-21	33.89	ATP binding / amino acid binding / protein kinase/...	[more]
D8LH32_ECTSI	1.820e-21	48.61	Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca...	[more]
D7FLN5_ECTSI	7.010e-20	54.81	Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI...	[more]
A0A6H5KF25_9PHAE	8.630e-20	34.03	Protein kinase domain-containing protein n=1 Tax=E...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:3181975..3183566 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	196.4
Seed ortholog evalue	2.3e-47
Seed eggNOG ortholog	2880.D8LRF5
Preferred name	RIPK4
Length	1122
KEGG ko	ko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathway	ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting category	other localisation
Gene id	Ec-00_003130.1
GOs	GO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.	protein kinase activity
EggNOG OGs	COG0515@1,KOG0192@2759
EC	2.7.11.1
COG Functional cat.	KLT
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01001

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003130	Ec-00_003130	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 3181975..3183566 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003130.1.1	Ec-00_003130.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3181975..3183069 +
Ec-00_003130.1.2	Ec-00_003130.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3183540..3183566 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003130.1	CDS:Ec-00_003130.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 3181975..3183069 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003130.1	Ec-00_003130.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 3181975..3183566 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:3181975..3183566+
coding sequence from alignment at chr_00:3181975..3183566+

mRNA sequence

>Ec-00_003130.1 ID=Ec-00_003130.1|Name=Ec-00_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=374bp
MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGD
TVGGPTAAPSTPAAATPATSSPGGDAIGGPTGAPSLPATTTPGTSSASDS
PTGGLTAAPLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKN
GADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANH
VKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVA
TTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGR
AVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCR
SVVMALERAATVAGEMTSRERRK*

spliced messenger RNA

>Ec-00_003130.1 ID=Ec-00_003130.1|Name=Ec-00_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1122bp|location=Sequence derived from alignment at chr_00:3181975..3183566+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCGGGCGCTGACGGAAAGATGATTCTGGCTGGGTACACGGACGG
GTCGTGGGAAGACGGCGCCAACCTGGGAGCAGATGATTTTTTGGCCGTTA
TGCTCAACACTATCGCAACTACACCCGCACCATCATCACCCGGCGGTGAC
ACGGTAGGCGGCCCTACAGCCGCCCCATCTACCCCCGCCGCGGCCACACC
TGCAACATCATCACCCGGCGGTGACGCGATAGGCGGCCCTACGGGCGCGC
CATCTCTCCCCGCCACAACAACACCAGGTACATCATCAGCCAGTGATTCT
CCGACAGGCGGCCTCACAGCCGCACCTCTTAGCGATGGATCGGCCTCTAG
CACTGCACCGATCATAGCGGGGGCGCTTTCCACCGCTGCTTTCGTGGCAC
TCTCCGCTGTCGGTTTTCTGCTGAGAAGGCGCAGAGCGGCGAAAAAGAAC
GGGGCAGACGGGGAAGACCCGCATGTTCTGCCTCTCGATGGGCTTGAAGA
CGGCCGGCAGCACGAAGTGAGCTTGAGCAAATCAGCTGTCATCGACGGAG
GCGGCAACCCGACCCTGCACCAAGAAAACCATTCTCCGCCCGCCAACCAT
GTTAAGTCGGTGGAGGCTGCGGCTAGCGGAGGAGGCGCCGCTGCAACGTT
AAACACCTCGCAGCCGATTGATGCCGGCAAGGTTGCTGGTGTTGCACTAG
CAGACGGTTCTGCCGAAGACTACTTGGCAAAGCAGCACTTCGTTGTGGCT
ACGACTTCCACGGCGGACGCCTCCACGCTCGATCGGGCCGCAGTAGCCGG
CATCTTCGGTGAAGAAGCCGAGTTTTGGGCCGACGGACCAAAGCCAGCTT
CTTCTGCAGCCGGTCGCCGTGGATCATGTAGCGATGTCGGAGTTGGACGC
GCCGTGATGAATGCGGCGCAGGAGCTAGCGCAACGCTGCCAGATTCCCGG
CGTTAGCGAGGCGGCAGCCATGGTGTCCATTCTCGTCAATCTTGTGACAG
ATAGCCGCGACAGCAACAACAAGGGCGACGCTACGCTCAAGCAATGCCGC
TCGGTTGTCATGGCGCTCGAACGGGCCGCGACGGTGGCTGGTGAGATGAC
GTCAAGAGAGCGAAGAAAGTAG

protein sequence of Ec-00_003130.1

>Ec-00_003130.1 ID=Ec-00_003130.1|Name=Ec-00_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=374bp
MAAGADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAPSSPGGD
TVGGPTAAPSTPAAATPATSSPGGDAIGGPTGAPSLPATTTPGTSSASDS
PTGGLTAAPLSDGSASSTAPIIAGALSTAAFVALSAVGFLLRRRRAAKKN
GADGEDPHVLPLDGLEDGRQHEVSLSKSAVIDGGGNPTLHQENHSPPANH
VKSVEAAASGGGAAATLNTSQPIDAGKVAGVALADGSAEDYLAKQHFVVA
TTSTADASTLDRAAVAGIFGEEAEFWADGPKPASSAAGRRGSCSDVGVGR
AVMNAAQELAQRCQIPGVSEAAAMVSILVNLVTDSRDSNNKGDATLKQCR
SVVMALERAATVAGEMTSRERRK*

mRNA from alignment at chr_00:3181975..3183566+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_003130.1 ID=Ec-00_003130.1|Name=Ec-00_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1592bp|location=Sequence derived from alignment at chr_00:3181975..3183566+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCGGGCGCTGACGGAAAGATGATTCTGGCTGGGTACACGGACGG
GTCGTGGGAAGACGGCGCCAACCTGGGAGCAGATGATTTTTTGGCCGTTA
TGCTCAACACTATCGCAACTACACCCGCACCATCATCACCCGGCGGTGAC
ACGGTAGGCGGCCCTACAGCCGCCCCATCTACCCCCGCCGCGGCCACACC
TGCAACATCATCACCCGGCGGTGACGCGATAGGCGGCCCTACGGGCGCGC
CATCTCTCCCCGCCACAACAACACCAGGTACATCATCAGCCAGTGATTCT
CCGACAGGCGGCCTCACAGCCGCACCTCTTAGCGATGGATCGGCCTCTAG
CACTGCACCGATCATAGCGGGGGCGCTTTCCACCGCTGCTTTCGTGGCAC
TCTCCGCTGTCGGTTTTCTGCTGAGAAGGCGCAGAGCGGCGAAAAAGAAC
GGGGCAGACGGGGAAGACCCGCATGTTCTGCCTCTCGATGGGCTTGAAGA
CGGCCGGCAGCACGAAGTGAGCTTGAGCAAATCAGCTGTCATCGACGGAG
GCGGCAACCCGACCCTGCACCAAGAAAACCATTCTCCGCCCGCCAACCAT
GTTAAGTCGGTGGAGGCTGCGGCTAGCGGAGGAGGCGCCGCTGCAACGTT
AAACACCTCGCAGCCGATTGATGCCGGCAAGGTTGCTGGTGTTGCACTAG
CAGACGGTTCTGCCGAAGACTACTTGGCAAAGCAGCACTTCGTTGTGGCT
ACGACTTCCACGGCGGACGCCTCCACGCTCGATCGGGCCGCAGTAGCCGG
CATCTTCGGTGAAGAAGCCGAGTTTTGGGCCGACGGACCAAAGCCAGCTT
CTTCTGCAGCCGGTCGCCGTGGATCATGTAGCGATGTCGGAGTTGGACGC
GCCGTGATGAATGCGGCGCAGGAGCTAGCGCAACGCTGCCAGATTCCCGG
CGTTAGCGAGGCGGCAGCCATGGTGTCCATTCTCGTCAATCTTGTGACAG
ATAGCCGCGACAGCAACAACAAGGGCGACGCTACGCTCAAGCAATGCCGC
TCGGTTGTCATGGCGCTCGAACGGGCCGCGACGGTGGCTGGTGAGGTGAG
CACGCGATATGGGAGCCTCCCCTTGTCTTTTTCGTTGGCGGTGTTACACG
TTATGGCGGGCTTGCGACAATGTCGATTCGAAGCACCTTGCCCTTGGAAA
ACATATTCCGTACATGGTAAGAGACACAGAAAGGGAGCGAGATGGAAACA
AACCTAGTGAGACAGAAGAGGGTCCCGCGAAACCGATAAGAATTTTGGCA
AATTATTATTATTCCGGGACAGATGTTTTTGAGTTTAATTACGCGGGCGA
AGCCCGTTAATACATATGTGAAACTCATTTATCTGCGGGGCGCACGCTTT
TAAAAATACTGCACCCCTCTCTCTGAATCAACGAAGGAGAGGAGATCTGA
CATCAGGAGTAGAGGTGCCGTCACCGCGGCAGCAAAGAAATCACCGTGCA
GCTTTGCTGCCATATGGGATGTTGATGAATGCTTTGGGGCGTGCGTTCAA
TTCAAAGAACCCCAGATGACGTCAAGAGAGCGAAGAAAGTAG

Coding sequence (CDS) from alignment at chr_00:3181975..3183566+

>Ec-00_003130.1 ID=Ec-00_003130.1|Name=Ec-00_003130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1122bp|location=Sequence derived from alignment at chr_00:3181975..3183566+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCGGGCGCTGACGGAAAGATGATTCTGGCTGGGTACACGGACGG
GTCGTGGGAAGACGGCGCCAACCTGGGAGCAGATGATTTTTTGGCCGTTA
TGCTCAACACTATCGCAACTACACCCGCACCATCATCACCCGGCGGTGAC
ACGGTAGGCGGCCCTACAGCCGCCCCATCTACCCCCGCCGCGGCCACACC
TGCAACATCATCACCCGGCGGTGACGCGATAGGCGGCCCTACGGGCGCGC
CATCTCTCCCCGCCACAACAACACCAGGTACATCATCAGCCAGTGATTCT
CCGACAGGCGGCCTCACAGCCGCACCTCTTAGCGATGGATCGGCCTCTAG
CACTGCACCGATCATAGCGGGGGCGCTTTCCACCGCTGCTTTCGTGGCAC
TCTCCGCTGTCGGTTTTCTGCTGAGAAGGCGCAGAGCGGCGAAAAAGAAC
GGGGCAGACGGGGAAGACCCGCATGTTCTGCCTCTCGATGGGCTTGAAGA
CGGCCGGCAGCACGAAGTGAGCTTGAGCAAATCAGCTGTCATCGACGGAG
GCGGCAACCCGACCCTGCACCAAGAAAACCATTCTCCGCCCGCCAACCAT
GTTAAGTCGGTGGAGGCTGCGGCTAGCGGAGGAGGCGCCGCTGCAACGTT
AAACACCTCGCAGCCGATTGATGCCGGCAAGGTTGCTGGTGTTGCACTAG
CAGACGGTTCTGCCGAAGACTACTTGGCAAAGCAGCACTTCGTTGTGGCT
ACGACTTCCACGGCGGACGCCTCCACGCTCGATCGGGCCGCAGTAGCCGG
CATCTTCGGTGAAGAAGCCGAGTTTTGGGCCGACGGACCAAAGCCAGCTT
CTTCTGCAGCCGGTCGCCGTGGATCATGTAGCGATGTCGGAGTTGGACGC
GCCGTGATGAATGCGGCGCAGGAGCTAGCGCAACGCTGCCAGATTCCCGG
CGTTAGCGAGGCGGCAGCCATGGTGTCCATTCTCGTCAATCTTGTGACAG
ATAGCCGCGACAGCAACAACAAGGGCGACGCTACGCTCAAGCAATGCCGC
TCGGTTGTCATGGCGCTCGAACGGGCCGCGACGGTGGCTGGTGAGATGAC
GTCAAGAGAGCGAAGAAAGTAG

Synonyms

The feature 'Ec-00_003130.1' has the following synonyms


Synonym
Esi1836_0001
Esi_1836_0001