Ec-00_002650.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002650.1
Unique NameEc-00_002650.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length176
Homology
BLAST of Ec-00_002650.1 vs. uniprot
Match: D7FLG1_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG1_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 2.760e-134
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
Query:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG
Sbjct:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 175          
BLAST of Ec-00_002650.1 vs. uniprot
Match: D7G6Q2_ECTSI (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q2_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 1.110e-127
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 1
Query:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLA 516
            MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYG+PAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLA
Sbjct:  211 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGNPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLA 382          
BLAST of Ec-00_002650.1 vs. uniprot
Match: D7FLB2_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB2_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 2.210e-111
Identity = 143/175 (81.71%), Postives = 157/175 (89.71%), Query Frame = 1
Query:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            MQRLWYNGWKRKHALKYQAVDTPDG+ RQLWGPMLGRRHDVA+LGES L+Q++QQWFND  G PYYIYGDPAYQ+ PWLMAP+KGVLT   + FNT M +CRVTVEWGFGKIVALWPYVDYAKKQQ  LS+CGLGKQY+VAG+LTNCHSCFYGNSTSKYFGV  P+L  YL+GEG
Sbjct:   33 MQRLWYNGWKRKHALKYQAVDTPDGISRQLWGPMLGRRHDVALLGESALLQSMQQWFNDDAGTPYYIYGDPAYQIPPWLMAPFKGVLTPEMQAFNTDMRACRVTVEWGFGKIVALWPYVDYAKKQQAALSSCGLGKQYSVAGILTNCHSCFYGNSTSKYFGVGPPSLGRYLSGEG 207          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5JXV8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV8_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 1.350e-110
Identity = 147/175 (84.00%), Postives = 161/175 (92.00%), Query Frame = 1
Query:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            MQRLWYNGWKRKHALKYQAVDTPDG+IRQLWGPMLGRRHDVA++GESGL+Q L+QWFNDA G PYYIYGDPAYQLSPWL  P+KGVLT+ Q+ FN+ MS+CRVTVEWGFGKI+ALWPYVDYAKKQ V LSA GLGKQY+VAGLLTNCHSC YGNSTSK+FGV  PTLR+YLAGEG
Sbjct:  211 MQRLWYNGWKRKHALKYQAVDTPDGIIRQLWGPMLGRRHDVALVGESGLLQYLEQWFNDAAGTPYYIYGDPAYQLSPWLQTPFKGVLTQDQQNFNSDMSACRVTVEWGFGKIMALWPYVDYAKKQHVALSAYGLGKQYSVAGLLTNCHSCLYGNSTSKFFGVRPPTLRSYLAGEG 385          
BLAST of Ec-00_002650.1 vs. uniprot
Match: D7G529_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G529_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 8.830e-109
Identity = 142/175 (81.14%), Postives = 158/175 (90.29%), Query Frame = 1
Query:    1 MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            MQRLWYNGWKRKHALKYQAVDTPDG++RQLWGPMLGRRHDVA+LGES L+Q++QQWFND  G PYYIYGDP YQ+SPWLMAP+KGVLT   + FNT MS+CRVTVEWG  KI+ALWPYVDYAKKQQV LS+CGLGKQY+VAG+LTNCHSCFYGNSTSKYFGV  P+L  YL+GEG
Sbjct:  189 MQRLWYNGWKRKHALKYQAVDTPDGILRQLWGPMLGRRHDVALLGESALLQSMQQWFNDDAGTPYYIYGDPTYQISPWLMAPFKGVLTPEMQAFNTDMSACRVTVEWGLDKILALWPYVDYAKKQQVALSSCGLGKQYSVAGILTNCHSCFYGNSTSKYFGVGPPSLGRYLSGEG 363          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5K351_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K351_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 9.080e-109
Identity = 142/174 (81.61%), Postives = 156/174 (89.66%), Query Frame = 1
Query:    4 QRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            QRLWYNGWKRKHALKYQAVD+PDG+IRQLWGPMLGRRHDVAMLG+S L+Q L+QWFNDA G PYYIYGDPAYQ+SPWL+ PYKG L+  Q+ FN+SMS+ RVTVEWGFGK+VALWPYVDYAKKQQV LSA GLGKQYAVAG+LTNCHSCFYGNSTSKYFG   P+LR YL  EG
Sbjct:   68 QRLWYNGWKRKHALKYQAVDSPDGIIRQLWGPMLGRRHDVAMLGQSALLQHLEQWFNDAAGTPYYIYGDPAYQVSPWLLTPYKGALSPLQQAFNSSMSAVRVTVEWGFGKVVALWPYVDYAKKQQVALSAAGLGKQYAVAGILTNCHSCFYGNSTSKYFGTKPPSLRRYLNAEG 241          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5K770_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K770_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 1.620e-107
Identity = 140/174 (80.46%), Postives = 157/174 (90.23%), Query Frame = 1
Query:    4 QRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            QRLWYNGWKRKHALKYQA+DTPDG+IR LWGP+LGRRHDVAM+GESGL+Q LQQWFNDA G PYY++GDPAY LSPWL+APYKGVL   ++ FNT+MSS RV+V+WGFGKIVALWPYVDYAKKQQV LSACGLGKQYAVAG+LTNCHS FY N+TS YFGV  P+LR+YL GEG
Sbjct:   68 QRLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGESGLLQDLQQWFNDAAGTPYYVFGDPAYSLSPWLLAPYKGVLNSLEQAFNTAMSSVRVSVKWGFGKIVALWPYVDYAKKQQVALSACGLGKQYAVAGILTNCHSSFYRNNTSFYFGVKPPSLRSYLNGEG 241          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5L0G5_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G5_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 2.750e-105
Identity = 140/174 (80.46%), Postives = 157/174 (90.23%), Query Frame = 1
Query:    4 QRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            Q+LWYNGWKRKHALKYQA+DTPDG+IR LWGP+LGRRHDVAM+GESGL+Q LQQWFNDA G PYY++GDPAY LSPWL+APYKGVL   ++ FNT+MSS RV+VEWGFGKIVALWPYVDYAKKQQV LSACGLGKQYAVAG+LTNCHS FY N+TS YFGV  P+LR+YL GEG
Sbjct:  212 QKLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGESGLLQDLQQWFNDAAGTPYYVFGDPAYSLSPWLLAPYKGVLNAFEQAFNTAMSSVRVSVEWGFGKIVALWPYVDYAKKQQVALSACGLGKQYAVAGILTNCHSSFYRNNTSFYFGVKPPSLRSYLNGEG 385          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5K0Y5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y5_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.930e-101
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = 1
Query:    4 QRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            QRLWYNGWKRKHALKYQAVDTPDG+IRQLWGPMLGRRHDV++LGESGL+Q +QQWFNDA G PYYI GDPA+ LSPWL+  YKG+LT+ Q  FN+ MSSCRVTVEWGF K+VALWP+VDYAKKQQV L ACGLGK+Y+VAGLLTNC SC YGNSTSK+ GV  PTL  YL+GEG
Sbjct:  120 QRLWYNGWKRKHALKYQAVDTPDGIIRQLWGPMLGRRHDVSLLGESGLLQYMQQWFNDA-GNPYYIDGDPAFPLSPWLIIGYKGLLTQEQRDFNSDMSSCRVTVEWGFAKVVALWPFVDYAKKQQVALFACGLGKRYSVAGLLTNCRSCLYGNSTSKFIGVRPPTLERYLSGEG 292          
BLAST of Ec-00_002650.1 vs. uniprot
Match: A0A6H5L856_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L856_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 3.950e-97
Identity = 133/174 (76.44%), Postives = 148/174 (85.06%), Query Frame = 1
Query:    4 QRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSSCRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSCFYGNSTSKYFGVPTPTLRAYLAGEG 525
            QRL+YNGWKR HALKYQAVDTPDG+IRQLWGPMLGRRHDV +LG+SGL+  +   FNDA G PYYIYGDPAY +SPWL AP+KGVLT  Q  FN +MS  RVTVEWGFG+IVALWPYVDY KKQQVGLSACGLGKQYAVAG+LTNCH+CFY NST++YF +  PTL  YL GEG
Sbjct:  210 QRLYYNGWKRLHALKYQAVDTPDGIIRQLWGPMLGRRHDVTLLGQSGLLAVMMDSFNDAEGEPYYIYGDPAYHVSPWLQAPFKGVLTPDQAEFNAAMSRVRVTVEWGFGRIVALWPYVDYHKKQQVGLSACGLGKQYAVAGILTNCHNCFYPNSTAQYFDLQPPTLDEYLHGEG 383          
The following BLAST results are available for this feature:
BLAST of Ec-00_002650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLG1_ECTSI2.760e-134100.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7G6Q2_ECTSI1.110e-12799.42DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
D7FLB2_ECTSI2.210e-11181.71DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JXV8_9PHAE1.350e-11084.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7G529_ECTSI8.830e-10981.14DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K351_9PHAE9.080e-10981.61DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K770_9PHAE1.620e-10780.46DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L0G5_9PHAE2.750e-10580.46DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K0Y5_9PHAE1.930e-10178.74DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L856_9PHAE3.950e-9776.44DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2847243..2847770 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score381.3
Seed ortholog evalue2.4e-103
Seed eggNOG ortholog2880.D7FLG1
Length528
Hectar predicted targeting categoryother localisation
Gene idEc-00_002650.1
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2AWDH@1,2RZYI@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002650Ec-00_002650Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2847243..2847770 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002650.1.1Ec-00_002650.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2847243..2847770 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002650.1CDS:Ec-00_002650.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2847243..2847770 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002650.1Ec-00_002650.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2847243..2847770 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002650.1 ID=Ec-00_002650.1|Name=Ec-00_002650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=176bp
MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLV
QTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSS
CRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSC
FYGNSTSKYFGVPTPTLRAYLAGEG*
back to top

spliced messenger RNA

>Ec-00_002650.1 ID=Ec-00_002650.1|Name=Ec-00_002650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=528bp|location=Sequence derived from alignment at chr_00:2847243..2847770+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAAGACTGTGGTACAACGGTTGGAAGCGGAAGCACGCCTTGAAATA
CCAGGCTGTAGACACACCGGACGGTATGATTCGGCAATTGTGGGGTCCCA
TGCTTGGTCGTCGCCATGACGTGGCGATGTTAGGGGAGAGTGGACTCGTG
CAGACACTGCAGCAGTGGTTCAACGACGCTAATGGCCTTCCGTACTACAT
ATACGGGGATCCCGCGTACCAGCTATCCCCATGGCTGATGGCCCCCTACA
AGGGCGTGTTGACGGAAGCCCAGGAAATGTTCAACACTTCAATGAGCTCG
TGCCGCGTAACCGTAGAGTGGGGGTTCGGGAAGATCGTCGCCTTGTGGCC
CTACGTAGACTACGCGAAGAAGCAGCAGGTCGGCCTCAGTGCATGCGGCC
TTGGCAAGCAATACGCAGTAGCAGGGCTTCTGACCAACTGTCACTCGTGC
TTTTACGGCAATTCGACGTCGAAGTACTTCGGCGTCCCCACCCCGACGCT
GCGAGCCTATCTTGCGGGTGAGGGTTGA
back to top

protein sequence of Ec-00_002650.1

>Ec-00_002650.1 ID=Ec-00_002650.1|Name=Ec-00_002650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=176bp
MQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLV
QTLQQWFNDANGLPYYIYGDPAYQLSPWLMAPYKGVLTEAQEMFNTSMSS
CRVTVEWGFGKIVALWPYVDYAKKQQVGLSACGLGKQYAVAGLLTNCHSC
FYGNSTSKYFGVPTPTLRAYLAGEG*
back to top

mRNA from alignment at chr_00:2847243..2847770+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002650.1 ID=Ec-00_002650.1|Name=Ec-00_002650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=528bp|location=Sequence derived from alignment at chr_00:2847243..2847770+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAAGACTGTGGTACAACGGTTGGAAGCGGAAGCACGCCTTGAAATA CCAGGCTGTAGACACACCGGACGGTATGATTCGGCAATTGTGGGGTCCCA TGCTTGGTCGTCGCCATGACGTGGCGATGTTAGGGGAGAGTGGACTCGTG CAGACACTGCAGCAGTGGTTCAACGACGCTAATGGCCTTCCGTACTACAT ATACGGGGATCCCGCGTACCAGCTATCCCCATGGCTGATGGCCCCCTACA AGGGCGTGTTGACGGAAGCCCAGGAAATGTTCAACACTTCAATGAGCTCG TGCCGCGTAACCGTAGAGTGGGGGTTCGGGAAGATCGTCGCCTTGTGGCC CTACGTAGACTACGCGAAGAAGCAGCAGGTCGGCCTCAGTGCATGCGGCC TTGGCAAGCAATACGCAGTAGCAGGGCTTCTGACCAACTGTCACTCGTGC TTTTACGGCAATTCGACGTCGAAGTACTTCGGCGTCCCCACCCCGACGCT GCGAGCCTATCTTGCGGGTGAGGGTTGA
back to top

Coding sequence (CDS) from alignment at chr_00:2847243..2847770+

>Ec-00_002650.1 ID=Ec-00_002650.1|Name=Ec-00_002650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=528bp|location=Sequence derived from alignment at chr_00:2847243..2847770+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAAGACTGTGGTACAACGGTTGGAAGCGGAAGCACGCCTTGAAATA
CCAGGCTGTAGACACACCGGACGGTATGATTCGGCAATTGTGGGGTCCCA
TGCTTGGTCGTCGCCATGACGTGGCGATGTTAGGGGAGAGTGGACTCGTG
CAGACACTGCAGCAGTGGTTCAACGACGCTAATGGCCTTCCGTACTACAT
ATACGGGGATCCCGCGTACCAGCTATCCCCATGGCTGATGGCCCCCTACA
AGGGCGTGTTGACGGAAGCCCAGGAAATGTTCAACACTTCAATGAGCTCG
TGCCGCGTAACCGTAGAGTGGGGGTTCGGGAAGATCGTCGCCTTGTGGCC
CTACGTAGACTACGCGAAGAAGCAGCAGGTCGGCCTCAGTGCATGCGGCC
TTGGCAAGCAATACGCAGTAGCAGGGCTTCTGACCAACTGTCACTCGTGC
TTTTACGGCAATTCGACGTCGAAGTACTTCGGCGTCCCCACCCCGACGCT
GCGAGCCTATCTTGCGGGTGAGGGTTGA
back to top
Synonyms
The feature 'Ec-00_002650.1' has the following synonyms
Synonym
Esi1591_0001
Esi_1591_0001