Ec-00_002320.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002320.1
Unique NameEc-00_002320.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length311
Homology
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BLAST of Ec-00_002320.1 vs. uniprot
Match: D7FKA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA6_ECTSI)

HSP 1 Score: 592 bits (1526), Expect = 2.570e-213
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1 
Query:    1 MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQGQSKAEVESTTLGRWEVVYRRXXXXXXXXXXXXXXQVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV 930
            MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQGQSKAEVESTTLGRWEVVYRRXXXXXXXXXXXXXXQVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV
Sbjct:    1 MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQGQSKAEVESTTLGRWEVVYRRXXXXXXXXXXXXXXQVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV 310
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A6H5JZC1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZC1_9PHAE)

HSP 1 Score: 542 bits (1396), Expect = 2.950e-189
Identity = 284/310 (91.61%), Postives = 294/310 (94.84%), Query Frame = 1 
Query:    1 MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQGQSKAEVESTTLGRWEVVYRRXXXXXXXXXXXXXXQVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV 930
            MSYFGFPFPEE QSF++HAQVLDYLCSYADEH+LHPLISLGCSVESVRLASLPS GDSSH FGSV+G LSSSEDSS  E A TGT TA AA R+GGGIDQGQS   VESTTLGRWEVVYRRXXXXXXXXXXXXXXQ+VAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIARE+SSVAHAVHVCDRSNPV SKGGERGNVWWRTALEKFEGANGVRFKNGEL+EVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSF+GLPQ +
Sbjct:   83 MSYFGFPFPEENQSFTTHAQVLDYLCSYADEHNLHPLISLGCSVESVRLASLPSAGDSSHAFGSVNGRLSSSEDSS--EEAATGTVTATAADRYGGGIDQGQSSTGVESTTLGRWEVVYRRXXXXXXXXXXXXXXQIVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREVSSVAHAVHVCDRSNPVTSKGGERGNVWWRTALEKFEGANGVRFKNGELVEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFIGLPQSI 390
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A6H5JY81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY81_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.330e-88
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 1 
Query:  511 MHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQR 927
            MHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPV SKG ERGNVW RTALEKFEGANGVRFKNGEL+EVDTVVWCTGYNYAFP LEGSGLLTAPA KRVHPVFEHL HVYHPSLSF+GLPQR
Sbjct:    1 MHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVTSKGRERGNVWSRTALEKFEGANGVRFKNGELVEVDTVVWCTGYNYAFPSLEGSGLLTAPALKRVHPVFEHLLHVYHPSLSFIGLPQR 139
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A835ZEW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.570e-39
Identity = 87/177 (49.15%), Postives = 106/177 (59.89%), Query Frame = 1 
Query:  424 FDAVCVCSGHFDETYTPTVAGLDE----FQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNS--KGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEG--SGLLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV 930
            FD V VC+GH+D     +  G       F G VM+A EYD  G     G+ VLCVGAR+SGTDIARE++ VA  VHV DRS    S  +GG  GN+     +EKF G  GV F +G   +VDTVV CTGY Y FPFLE     L     +K V P+++HLFH YHP+L F+GLP  V
Sbjct:  175 FDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAG--GLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSV 349
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A6H5JTB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB1_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 5.550e-37
Identity = 77/94 (81.91%), Postives = 81/94 (86.17%), Query Frame = 1 
Query:    1 MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRH 282
            MSY GFPFPEE QSF++HAQVLDYLCSYADEH+LHPLISLG SVESVRLASLPSVGDSSH  GSV  SLSSSEDSS  E A TGT TA AAGR+
Sbjct:    1 MSYLGFPFPEENQSFTTHAQVLDYLCSYADEHNLHPLISLGRSVESVRLASLPSVGDSSHASGSVGDSLSSSEDSS--EEAATGTVTATAAGRY 92
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BLAST of Ec-00_002320.1 vs. uniprot
Match: W7TNR6_9STRA (Flavin monooxygenase FMO n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNR6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.290e-34
Identity = 116/343 (33.82%), Postives = 160/343 (46.65%), Query Frame = 1 
Query:    1 MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLASLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVT---GTDTAAAAGRHGGGI--DQGQSKAEVESTTLGRWEVVYRRXXXXXXXXXXXXXXQVVAEVFDAVCVCSGHFDETYTPTVAGLDE-FQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGG-------ERGNVWWRTALEKF-EGANG--VRFKNGELLE-VDTVVWCTGYNYAFPFLEG-SGLLTAPAS---------------KRVHPVFEHLFHVYHPSLSFVGLPQRV 930
            M++   PF     SF  H  V  YL  YA ++D+  LI+    V+ VR            T G              GEGA     G  T      HG G   ++G  +   E      W V   R              +  +EVFDAV VC+GH+   + P + GL E ++G VMH+R+YD P  EA  G +VLCVG R+SGTDIARE++ VA  VHV DR     ++ G       +RGN++ R  L  F  G +G    F++G +   +D V++CTG+ Y  PFL G S   + P S               + V P+++HLFH + PSL F+GL   V
Sbjct:  126 MAFLDTPFDPSLPSFLRHTDVQTYLEGYAKQYDVEKLITFDTEVKEVRPVR--------RTRGQE------------GEGAAPYPPGDYTR----EHGLGAAREKGGPEGAGEEGEAPMWRVTVVRQAGGSVAGACEGVPE--SEVFDAVVVCNGHYQVPHCPDLPGLREHYRGRVMHSRDYDHP--EALRGLKVLCVGYRASGTDIAREVAQVASEVHVVDRRLSKMTEDGKDEAGSLQRGNIYRRPGLRVFLPGGDGKSAMFEDGSVCTGIDLVLYCTGFQYHMPFLSGGSAFESRPLSPSALLSDARLLRVEDRAVFPLYQHLFHAFFPSLVFIGLLHSV 440
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A2T7CA38_9POAL (Flavin-containing monooxygenase n=5 Tax=Panicum TaxID=4539 RepID=A0A2T7CA38_9POAL)

HSP 1 Score: 137 bits (344), Expect = 1.690e-33
Identity = 72/175 (41.14%), Postives = 105/175 (60.00%), Query Frame = 1 
Query:  406 QVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHV-YHPSLSFVGLPQR 927
            +V  EVFDAV VC+GH+       + G+D ++G  MH+  Y +P  E F  + V+ VG  +SGTDIA E+S VA  VH+  R +    K G R NVW  T ++  +    +RF +G  +  D++++CTGY+Y FPFL+  GL  A    RV P++ H+F   Y P+LSF+GLP +
Sbjct:  151 EVAEEVFDAVVVCNGHWTVPQVAEIRGIDNWRGKQMHSHNYRVP--EPFRDQNVVVVGMGASGTDIALEVSHVAKEVHIATRYSDRLGKVGLRKNVWIHTEVDCIQDDGKIRFTDGSAVAADSILYCTGYHYHFPFLDLDGL--AIDDNRVGPLYNHVFPPKYAPNLSFIGLPLK 321
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BLAST of Ec-00_002320.1 vs. uniprot
Match: U5KK09_ERUVS (Flavin-monooxygenase (Fragment) n=1 Tax=Eruca vesicaria subsp. sativa TaxID=29727 RepID=U5KK09_ERUVS)

HSP 1 Score: 133 bits (335), Expect = 8.750e-33
Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 1 
Query:  418 EVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSK---GGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFH-VYHPSLSFVGLP 921
            E+FDAV VCSGH+ E Y  T++G++ + G  +H+  Y +PG   F  + V+ +G  +SG DI+R+++ VA  VH+  R +  N+         N+W  + +E       + FKNG+ +  D+VV+CTGY Y FPFLE +G ++     RV P++EH+F     P LSF+GLP
Sbjct:  160 EIFDAVVVCSGHYTEPYVATISGINSWPGKHIHSHNYRVPG--PFKNEVVVVIGNFASGADISRDVAKVAKEVHIASRGSEANTYEKLSVPTNNLWIHSEIETACEDGSIIFKNGKAVHADSVVYCTGYKYKFPFLETNGYMSID-DNRVEPLYEHVFPPALAPGLSFIGLP 328
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A448ZGX5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGX5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.190e-32
Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 
Query:  415 AEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNP--VNSKGGERGNVWWRTALEKFEGANGVRFKN--GELLEVDTVVWCTGYNYAFPFLEGSG---LLTAPASKRVHPVFEHLFHVYHPSLSFVGLPQRV 930
            +EVFDAVCVC+GH+     P ++G++ F+G ++H+  YD P V  F  + VLCVG R+SG+D+AREIS  A  V++ D + P  V+ K     NV W          + + F    GE  +VDT++ C+GY+Y FPF+  +    L   P  +RV P++E L+H  +PSL+F+GL   V
Sbjct:  206 SEVFDAVCVCNGHYSAPANPIISGMENFEGNIIHSITYDDPSV--FKDQTVLCVGGRASGSDLAREISHFAKHVYLSDTTCPALVDGKPIIEENVSWVPRTTAVLPNSRISFGPTCGETPKVDTIILCSGYDYEFPFINDNSNLDLSVVPGERRVKPLYEQLWHAQYPSLAFIGLQHSV 382
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BLAST of Ec-00_002320.1 vs. uniprot
Match: A0A2R6XUR2_MARPO (Flavin-containing monooxygenase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUR2_MARPO)

HSP 1 Score: 136 bits (342), Expect = 1.390e-32
Identity = 65/176 (36.93%), Postives = 110/176 (62.50%), Query Frame = 1 
Query:  406 QVVAEVFDAVCVCSGHFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKNGELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLF-HVYHPSLSFVGLPQRV 930
            Q   +VFDAV +C+GH+ E     + G++ + G  MH+  Y +P  E+F  K ++ +G  +SG DI++E++ VA  VHVC R  P  ++  ++GN+W    +E+      V+F++G+    D ++ CTGY Y+FPFL+  G++T     R+ P+++H+F   + P+LSFVGLPQ++
Sbjct:  253 QTKEDVFDAVVICNGHYAEPKLINIPGVESWPGFQMHSHNYRVP--ESFQDKIIVIIGNANSGGDISKELAEVAKEVHVCGRRWPETAQIKQQGNIWLHPLVERACEDGTVKFQDGKSTRADVILHCTGYLYSFPFLDTEGVVTVK-DGRIDPLYKHVFVPAFGPTLSFVGLPQKI 425
The following BLAST results are available for this feature:
BLAST of Ec-00_002320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKA6_ECTSI2.570e-213100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZC1_9PHAE2.950e-18991.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY81_9PHAE1.330e-8894.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEW0_9STRA3.570e-3949.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JTB1_9PHAE5.550e-3781.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TNR6_9STRA2.290e-3433.82Flavin monooxygenase FMO n=2 Tax=Monodopsidaceae T... [more]
A0A2T7CA38_9POAL1.690e-3341.14Flavin-containing monooxygenase n=5 Tax=Panicum Ta... [more]
U5KK09_ERUVS8.750e-3338.95Flavin-monooxygenase (Fragment) n=1 Tax=Eruca vesi... [more]
A0A448ZGX5_9STRA1.190e-3240.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A2R6XUR2_MARPO1.390e-3236.93Flavin-containing monooxygenase n=2 Tax=Marchantia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2583310..2585094 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score594.3
Seed ortholog evalue3.2e-167
Seed eggNOG ortholog2880.D7FKA6
Preferred nameFMO1
Length933
KEGG rclassRC02233
KEGG koko:K00485
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,map00982,map01120
Hectar predicted targeting categoryother localisation
Gene idEc-00_002320.1
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0004499,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005829,GO:0006457,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016020,GO:0016491,GO:0016705,GO:0016709,GO:0031984,GO:0034975,GO:0036094,GO:0042175,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:0098827,GO:1901265,GO:1901363
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
EC1.14.13.8
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002320Ec-00_002320Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2583310..2585094 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002320.1.4Ec-00_002320.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2583310..2583316 -
Ec-00_002320.1.3Ec-00_002320.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2583505..2583665 -
Ec-00_002320.1.2Ec-00_002320.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2583990..2584129 -
Ec-00_002320.1.1Ec-00_002320.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2584470..2585094 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002320.1CDS:Ec-00_002320.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2583310..2583316 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002320.1Ec-00_002320.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2583310..2585094 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002320.1 ID=Ec-00_002320.1|Name=Ec-00_002320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=311bp
MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLA
SLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQ
GQSKAEVESTTLGRWEVVYRRRSAPAAAAVADDDDQVVAEVFDAVCVCSG
HFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTD
IAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKN
GELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPS
LSFVGLPQRV*
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spliced messenger RNA

>Ec-00_002320.1 ID=Ec-00_002320.1|Name=Ec-00_002320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=933bp|location=Sequence derived from alignment at chr_00:2583310..2585094- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTACTTCGGGTTCCCCTTCCCAGAAGAGACCCAATCCTTCAGCTC
TCACGCCCAAGTGCTGGACTACCTCTGCTCCTACGCGGACGAACACGACC
TGCATCCCCTCATCAGCCTCGGATGCTCCGTCGAATCCGTCCGCCTAGCT
AGTCTTCCCTCCGTCGGGGATTCCTCGCACACATTTGGCAGCGTTGACGG
CAGTCTGAGTAGCAGCGAAGACTCATCTTTGGGGGAGGGAGCGGTGACGG
GGACCGACACTGCTGCTGCTGCAGGCCGGCACGGGGGCGGAATCGACCAA
GGGCAATCGAAGGCGGAGGTGGAGAGCACAACGCTCGGGAGGTGGGAGGT
GGTGTACCGGCGAAGAAGCGCTCCCGCTGCGGCTGCCGTTGCTGATGATG
ATGACCAGGTCGTGGCGGAGGTGTTCGACGCCGTTTGCGTTTGCAGCGGG
CACTTCGACGAGACGTACACACCGACGGTTGCGGGGCTGGACGAGTTCCA
GGGGACGGTCATGCACGCCAGGGAGTACGACATACCGGGCGTTGAGGCGT
TCGTGGGGAAGAGGGTGCTGTGCGTCGGGGCTAGGTCTAGCGGGACGGAC
ATCGCGCGCGAGATCTCCTCCGTCGCGCACGCGGTCCACGTGTGCGACAG
GAGCAACCCTGTCAACTCCAAGGGCGGAGAAAGAGGCAACGTTTGGTGGC
GGACGGCGCTGGAGAAGTTCGAGGGCGCCAACGGAGTGCGGTTCAAGAAT
GGAGAGCTCCTTGAGGTAGACACTGTGGTGTGGTGCACCGGCTACAACTA
CGCTTTCCCGTTCTTGGAAGGCTCCGGGCTGCTCACCGCGCCGGCGTCGA
AGCGCGTTCACCCTGTGTTCGAGCACCTCTTCCACGTGTACCACCCGTCC
CTGTCATTCGTCGGCCTCCCTCAGAGGGTGTAA
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protein sequence of Ec-00_002320.1

>Ec-00_002320.1 ID=Ec-00_002320.1|Name=Ec-00_002320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=311bp
MSYFGFPFPEETQSFSSHAQVLDYLCSYADEHDLHPLISLGCSVESVRLA
SLPSVGDSSHTFGSVDGSLSSSEDSSLGEGAVTGTDTAAAAGRHGGGIDQ
GQSKAEVESTTLGRWEVVYRRRSAPAAAAVADDDDQVVAEVFDAVCVCSG
HFDETYTPTVAGLDEFQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTD
IAREISSVAHAVHVCDRSNPVNSKGGERGNVWWRTALEKFEGANGVRFKN
GELLEVDTVVWCTGYNYAFPFLEGSGLLTAPASKRVHPVFEHLFHVYHPS
LSFVGLPQRV*
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mRNA from alignment at chr_00:2583310..2585094-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002320.1 ID=Ec-00_002320.1|Name=Ec-00_002320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1785bp|location=Sequence derived from alignment at chr_00:2583310..2585094- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCCTACTTCGGGTTCCCCTTCCCAGAAGAGACCCAATCCTTCAGCTC
TCACGCCCAAGTGCTGGACTACCTCTGCTCCTACGCGGACGAACACGACC
TGCATCCCCTCATCAGCCTCGGATGCTCCGTCGAATCCGTCCGCCTAGCT
AGTCTTCCCTCCGTCGGGGATTCCTCGCACACATTTGGCAGCGTTGACGG
CAGTCTGAGTAGCAGCGAAGACTCATCTTTGGGGGAGGGAGCGGTGACGG
GGACCGACACTGCTGCTGCTGCAGGCCGGCACGGGGGCGGAATCGACCAA
GGGCAATCGAAGGCGGAGGTGGAGAGCACAACGCTCGGGAGGTGGGAGGT
GGTGTACCGGCGAAGAAGCGCTCCCGCTGCGGCTGCCGTTGCTGATGATG
ATGACCAGGTCGTGGCGGAGGTGTTCGACGCCGTTTGCGTTTGCAGCGGG
CACTTCGACGAGACGTACACACCGACGGTTGCGGGGCTGGACGAGTTCCA
GGGGACGGTCATGCACGCCAGGGAGTACGACATACCGGGCGTTGAGGCGT
TCGTGGGGAAGAGGGTGCTGTGCGTCGGGGCTAGGTCTAGCGGGACGGAC
ATCGCGCGCGAGATCTCCTCCGTCGGTGAGGCTTAATCTATCTTCTAGAA
GTACATCAGTTTTCTCATTTCGCAAGAGCTTAGGCAGTGTACAAAGGGGA
CGTAGATCATGGGCTCTCACGCTTGTCCTCCTCCCGCTTGAAACACCGTT
CGCGTGTTGCAGCAGTGCTACACGTACTTGCAAGTTTGTGTTGCGCCGCG
TGTTGTTGAGGTTGATGTACTGACGTCGCTTGTCTCGCCGCACGTCCGCA
TGACCCCCGTCTCACCCGCACAACGTCGTACCTTCCTTCGACAGCTTTTG
TGCTCGTCATGCTCACGCGTACGCATTCCGTTGGGGGGGGTTGCTGTTGT
TCCATGCTGTTCCAGCGCACGCGGTCCACGTGTGCGACAGGAGCAACCCT
GTCAACTCCAAGGGCGGAGAAAGAGGCAACGTTTGGTGGCGGACGGCGCT
GGAGAAGTTCGAGGGCGCCAACGGAGTGCGGTTCAAGAATGGAGAGCTCC
TTGAGGTGGCTGTTCTTTGTTTTATCTCATGACCTGGGTTGGGCGCATCC
CGGGGATGCCATGTTTCTCGTGGCTCGAGAGTCTTGCTCACTCCACTGGG
TTGGCACCGTCTCTTTTCACGGCATATTCTCGTTTTATATGGCCCTTGGT
AATGGTGGAGTCGGTAAAAGGCGCCTAGCATCAACACACGGCGTAGCGCG
AAATGGGACTGCCGCGTGCCGGCGAGAGTCATTATTTCCGTCCCCATTGA
GATAGACGCCCATACTGTTCCCCCCCGGGCCCGCCTTTTTGACACACTGA
GCGTTCTGCCTGCAACCTGCAAAGCGCAGGTAGACACTGTGGTGTGGTGC
ACCGGCTACAACTACGCTTTCCCGTTCTTGGAAGGCTCCGGGCTGCTCAC
CGCGCCGGCGTCGAAGCGCGTTCACCCTGTGTTCGAGCACCTCTTCCACG
TGTACCACCCGTCCCTGTCATTCGTCGGCCTCCCTCAGAGGTAGGTGCAT
ACCAGTAGTCTCGAATTTGGTCCCTGTCAACCCCCAAGCAGAATGTTCTT
TTCCAACGAAGCGAGCACGATGGATTTTTTTTCTTCCGTTGCCAACACCC
GTCGTGTGATGCCGCACATCTGTTGCCTTAGAACGCTCGAGCCTGTGAGT
GAAAATCTATGGTGTGCTTTGAGCGAAGGGTGTAA
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Coding sequence (CDS) from alignment at chr_00:2583310..2585094-

>Ec-00_002320.1 ID=Ec-00_002320.1|Name=Ec-00_002320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=933bp|location=Sequence derived from alignment at chr_00:2583310..2585094- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCCTACTTCGGGTTCCCCTTCCCAGAAGAGACCCAATCCTTCAGCTC
TCACGCCCAAGTGCTGGACTACCTCTGCTCCTACGCGGACGAACACGACC
TGCATCCCCTCATCAGCCTCGGATGCTCCGTCGAATCCGTCCGCCTAGCT
AGTCTTCCCTCCGTCGGGGATTCCTCGCACACATTTGGCAGCGTTGACGG
CAGTCTGAGTAGCAGCGAAGACTCATCTTTGGGGGAGGGAGCGGTGACGG
GGACCGACACTGCTGCTGCTGCAGGCCGGCACGGGGGCGGAATCGACCAA
GGGCAATCGAAGGCGGAGGTGGAGAGCACAACGCTCGGGAGGTGGGAGGT
GGTGTACCGGCGAAGAAGCGCTCCCGCTGCGGCTGCCGTTGCTGATGATG
ATGACCAGGTCGTGGCGGAGGTGTTCGACGCCGTTTGCGTTTGCAGCGGG
CACTTCGACGAGACGTACACACCGACGGTTGCGGGGCTGGACGAGTTCCA
GGGGACGGTCATGCACGCCAGGGAGTACGACATACCGGGCGTTGAGGCGT
TCGTGGGGAAGAGGGTGCTGTGCGTCGGGGCTAGGTCTAGCGGGACGGAC
ATCGCGCGCGAGATCTCCTCCGTCGCGCACGCGGTCCACGTGTGCGACAG
GAGCAACCCTGTCAACTCCAAGGGCGGAGAAAGAGGCAACGTTTGGTGGC
GGACGGCGCTGGAGAAGTTCGAGGGCGCCAACGGAGTGCGGTTCAAGAAT
GGAGAGCTCCTTGAGGTAGACACTGTGGTGTGGTGCACCGGCTACAACTA
CGCTTTCCCGTTCTTGGAAGGCTCCGGGCTGCTCACCGCGCCGGCGTCGA
AGCGCGTTCACCCTGTGTTCGAGCACCTCTTCCACGTGTACCACCCGTCC
CTGTCATTCGTCGGCCTCCCTCAGAGGGTGTAA
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Synonyms
The feature 'Ec-00_002320.1' has the following synonyms
Synonym
Esi1421_0001
Esi_1421_0001