Ec-00_002280.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-00_002280.1 vs. uniprot
Match: D7FK67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK67_ECTSI) HSP 1 Score: 756 bits (1953), Expect = 3.270e-274 Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 1
Query: 1 MTTSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 1302
MTTSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ
Sbjct: 1 MTTSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 434
BLAST of Ec-00_002280.1 vs. uniprot
Match: D7FTV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV3_ECTSI) HSP 1 Score: 656 bits (1692), Expect = 2.810e-232 Identity = 378/421 (89.79%), Postives = 384/421 (91.21%), Query Frame = 1
Query: 40 ACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 1302
ACN D EC+ C SY VEGC SA G+TCDDLE AVCCAVDGCEDN LNDLLACIN+D+ CS D+GDCASDGSRAISDSD TTDTDSAGYLTTST TDTIYTSM XX ECATEVVACNDDTECVDC TSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFD GDCAS GSRAISDSDATTDTDSAGYLTTSTT TIYTSMXX ECATEV ACNDDTECVDC TSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGL+DLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ
Sbjct: 154 ACNVDDECIFCTQSYVDTVEGCFASATGSTCDDLEEAVCCAVDGCEDNVALNDLLACINSDSPCSVDIGDCASDGSRAISDSDTTTDTDSAGYLTTSTXXXXTDTIYTSMTXXETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 574
BLAST of Ec-00_002280.1 vs. uniprot
Match: A0A6H5JWN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN7_9PHAE) HSP 1 Score: 573 bits (1476), Expect = 1.690e-197 Identity = 335/459 (72.98%), Postives = 346/459 (75.38%), Query Frame = 1
Query: 1 MTTSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLL-------------ACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLL-------------ACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRF 1299
MTTSETECA EV ACNDDTECVDC TSYAALVEGC+ SAGGTTCDDLEGAVCCAVDGCEDND LNDLL AC ADTGCS D+GDCASDGSR SD TTDTDSAGYLTT T T TTD++Y SM ECA EV ACNDDTECVDC TSYAALVEGC+ SAGGTTCDDLEGAVCCAVDGCEDND LNDLL AC ADTGCS D GDCAS GSR SD TTDTDSAGYLTT T ++Y SM SETECA EVEACNDDTECVDC TSYAALVEGC+ SAGGTTCDDLEGAVCCAVDGCEDND L+DLLAC ADTGCS D+GDCAS GS GSDTTTD XXXXXXXXXXXX AADDGEST S PLPIGDD A PTNTESSATRSAAAKG SA +WLIA AAPSLWRRF
Sbjct: 263 MTTSETECAIEVEACNDDTECVDCATSYAALVEGCIESAGGTTCDDLEGAVCCAVDGCEDNDALNDLLGAFLVVLCLRKSLACSIADTGCSIDIGDCASDGSRGNYGSDTTTDTDSAGYLTTPTITPTTDSMYPSMTTSETECAIEVEACNDDTECVDCATSYAALVEGCIESAGGTTCDDLEGAVCCAVDGCEDNDALNDLLGAFLVVLCLRKSLACSIADTGCSIDIGDCASDGSRGNYGSDTTTDTDSAGYLTTPTITPTTDSMYPSMTTSETECAIEVEACNDDTECVDCATSYAALVEGCIESAGGTTCDDLEGAVCCAVDGCEDNDALNDLLACSIADTGCSIDIGDCASDGSRGNYGSDTTTDX----------XXXXXXXXXXXXXAADDGESTSSTPLPIGDDXXXXXXATEDADPTNTESSATRSAAAKGGSAFLWLIATAAPSLWRRF 711
BLAST of Ec-00_002280.1 vs. uniprot
Match: D7FTV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV5_ECTSI) HSP 1 Score: 375 bits (962), Expect = 1.700e-122 Identity = 229/441 (51.93%), Postives = 265/441 (60.09%), Query Frame = 1
Query: 7 TSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXX---------TIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 1302
T+ET+C TE+ ACN D ECV C SY VEGC SA G+TCDD+E +VCCAVDGCEDN+ LNDLL CINA++ CS D+GDCA DGSR ISDSD TTDTD A TT TD+ YTSM +C TE+ ACN D ECV C SY V+GC + G+TCDD+E AVCCAVDGCEDN+ L+DLL CIN D+ C D DCA+ GSR IS SD TTDTD A + +T TT XX T XX C TE+ AC+ D+EC+ C SY A VEGCL + G+TCD +E AVCCAVDGCEDND L+DLL C+NADT C D+GDC S S AIS D+E + DA NTESSAT SA A G S VWLIAA AP LWR+FQ
Sbjct: 144 TTETDCPTEISACNADDECVTCTQSYVDAVEGCFASATGSTCDDVEESVCCAVDGCEDNEALNDLLVCINAESTCSIDIGDCAEDGSRGISDSDTTTDTDDAVIDTT------TDSPYTSMTTSETDCPTEISACNADDECVTCTQSYVEAVDGCFAAVTGSTCDDVEEAVCCAVDGCEDNEALSDLLTCINEDSTCQVDIEDCAADGSRDISGSDTTTDTDPAIFPSTPTTTTSXXXXXXXXPGGTEXXXXXXXXXXCPTELAACSADSECIACTESYVAAVEGCLAAVTGSTCDGIEEAVCCAVDGCEDNDALNDLLGCLNADT-CPIDIGDCDS--SVAIS------------------------------------------------DEEGEADAG------NTESSATPSAVAMGGSTAVWLIAAVAPILWRQFQ 521
BLAST of Ec-00_002280.1 vs. uniprot
Match: D7FTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV4_ECTSI) HSP 1 Score: 226 bits (576), Expect = 8.760e-67 Identity = 169/332 (50.90%), Postives = 195/332 (58.73%), Query Frame = 1
Query: 355 IYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGT-TCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCS-FDFGDCASGGSRAISDSDATTDTDSAGYLTTSTTXXXXXTIYTSMXXSETECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADD-------------GESTGSA-PLPIGDDDEDKKDAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 1302
++T+ C E AC C+ C +Y A C S T TCDDL A+CCA +GCEDN+ D++ CIN D GC D GDCA GGS AIS SD T XX T+C TE+ ACN D ECV C SY VEGC SA G+TCDD+E +VCCAVDGCEDN+ L+DLLACINA++ CS D+GDC + GS AISGSDTTT+T XXXXXXXXXXXXXXXXX G+ T A P P+GDD+E XXXXX +TESSAT S AA G S VWLIAAAAP LW RFQ
Sbjct: 48 LFTTTYTDGDACPNEDDACVASASCLACNEAYMAAFSDCAASLTSTSTCDDLAEAMCCAAEGCEDNEEFADIMGCINGDLGCGVIDIGDCAGGGSTAISGSDTT---------------------XXXXXXXXTDCPTEISACNADDECVTCTQSYVDAVEGCFASATGSTCDDVEESVCCAVDGCEDNEALNDLLACINAESTCSIDIGDCEADGSRAISGSDTTTETDGTVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDTSDAIPFPVGDDEEXXXXXXXXXXXADTESSAT-SVAAMGGSTAVWLIAAAAPGLWGRFQ 357
BLAST of Ec-00_002280.1 vs. uniprot
Match: A0A6H5K6K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K1_9PHAE) HSP 1 Score: 189 bits (481), Expect = 1.760e-51 Identity = 114/219 (52.05%), Postives = 130/219 (59.36%), Query Frame = 1
Query: 22 CATEVVACNDDTECVDCFTSYAALVEGCLVSAGGT-TCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCS-FDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTD 672
C E AC C+ C +Y A GC S T TCDDL A+CCA +GCEDN+ D++ CIN D GC D+GDCA GS AIS S XXXXX C TE+ ACN D+ECV C SY VEGC SA G+TCDD+E AVCCAVDGCEDN+ LNDLLACINA++ CS D GDCA+ GSRAIS S TT TD
Sbjct: 50 CPAEDAACVASASCLACNDAYMAAFSGCAASLTSTFTCDDLAEAMCCAAEGCEDNEEFADIMGCINGDLGCGVIDIGDCAGGGSTAISGSXX---------------------XXXXXXXXXXXCPTEISACNADSECVTCTQSYVDAVEGCFESATGSTCDDVEEAVCCAVDGCEDNEALNDLLACINAESTCSIDIGDCAADGSRAISGSGTTTYTD 247
BLAST of Ec-00_002280.1 vs. uniprot
Match: A0A6H5JW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW24_9PHAE) HSP 1 Score: 189 bits (481), Expect = 6.020e-49 Identity = 121/212 (57.08%), Postives = 137/212 (64.62%), Query Frame = 1
Query: 217 ADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTT----------STTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAGYLTT----STTXXXXX------TIYTSMXXSETECATEVEACNDDTE 792
ADTGCS D+GDCA+ GS AIS SD TTDTDS GYLT+S +TT++ YTSM ECA E+ AC D EC+ C SY ++GC SA G+ CDDLEGAVCCAVDGCED D LND LACINAD+ C D GDCA GS AI SD TTDT+SAGYLTT STT +IY SM SETE A E+ ACN+D E
Sbjct: 1141 ADTGCSVDIGDCATAGSVAISGSDTTTDTDSTGYLTSSAXXXXXXXGFPIDTTTNSTYTSMTTS--ECAIELEACKADGECIVCTQSYVDTMDGCFASATGSICDDLEGAVCCAVDGCEDIDALNDHLACINADSTCFIDIGDCAMDGSAAIFISDTTTDTNSAGYLTTPXXTSTTDTGPPIDTTTDSIYKSMTASETERAIEISACNEDDE 1350 The following BLAST results are available for this feature:
BLAST of Ec-00_002280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_002280.1 ID=Ec-00_002280.1|Name=Ec-00_002280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=435bpback to top spliced messenger RNA >Ec-00_002280.1 ID=Ec-00_002280.1|Name=Ec-00_002280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1305bp|location=Sequence derived from alignment at chr_00:2563973..2566216+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGACGACGAGCGAGACCGAATGCGCCACCGAAGTGGTGGCTTGCAACGAback to top protein sequence of Ec-00_002280.1 >Ec-00_002280.1 ID=Ec-00_002280.1|Name=Ec-00_002280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=435bp MTTSETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAback to top mRNA from alignment at chr_00:2563973..2566216+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_002280.1 ID=Ec-00_002280.1|Name=Ec-00_002280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2244bp|location=Sequence derived from alignment at chr_00:2563973..2566216+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:2563973..2566216+ >Ec-00_002280.1 ID=Ec-00_002280.1|Name=Ec-00_002280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1305bp|location=Sequence derived from alignment at chr_00:2563973..2566216+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_002280.1' has the following synonyms
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