Ec-00_002210.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002210.1
Unique NameEc-00_002210.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length185
Homology
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: D7FJU5_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU5_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 1.840e-132
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 
Query:    1 MRKDHAEFDVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKASVL 552
            MRKDHAEFDVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKASVL
Sbjct:    1 MRKDHAEFDVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKASVL 184
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 8.580e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 
Query:   28 VNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA 543
            VNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA
Sbjct:  430 VNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA 601
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A6H5L0M9_9PHAE (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M9_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.050e-91
Identity = 154/190 (81.05%), Postives = 154/190 (81.05%), Query Frame = 1 
Query:   28 VNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQ----------------VTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKASV 549
            VNLSNGKTGGGSYSVLSELGTLQ                  AMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQ                VTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTS DSR AARDLRTGKASV
Sbjct:  432 VNLSNGKTGGGSYSVLSELGTLQ------------------AMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQASDPRIKRVNISPDVQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSPDSRGAARDLRTGKASV 603
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.150e-53
Identity = 96/174 (55.17%), Postives = 122/174 (70.11%), Query Frame = 1 
Query:   28 VNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKA--RGLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKA 543
            V+  + K  GGS SVL+E+GTLQ+EFRYLS   G  KYA    + FD + G     GLYPI +NP+ G+   SQVTFGALGDSFYEYLLK W+QGG+ E  YR MY+ AMDG+   L++K+   GLTY+S+ +G++   +MDHL CFLAG LALG+ T+ D  RA RDL+T KA
Sbjct:  567 VSFRSHKNSGGSKSVLAEIGTLQVEFRYLSKITGIPKYADKVNKVFDHMYGLPSKDGLYPIFVNPSNGQTVGSQVTFGALGDSFYEYLLKAWLQGGKTETKYRTMYDRAMDGMTSKLLRKSDPSGLTYVSDLSGSKNVDKMDHLVCFLAGTLALGSKTTDDPVRADRDLKTAKA 740
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.750e-50
Identity = 93/181 (51.38%), Postives = 119/181 (65.75%), Query Frame = 1 
Query:   28 VNLSNGKTGG----GSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAA---RDLRTGKA 543
            V+L++G        GS S+LSELGT+Q+EFRYLSH  GD  + R A +  + L       GLYPI INP +G   +S VTFGALGDSFYEYLLKVW+QGG++E  YR MY+ AMDG+   L++      L Y+S+W+G R  H+MDHL CF+ G LALGA +S  +R A    RDL+  KA
Sbjct:  209 VHLTSGTASNPSWTGSSSILSELGTMQVEFRYLSHASGDASFGRKAEQVIETLNKHAPADGLYPIYINPRSGTPANSHVTFGALGDSFYEYLLKVWLQGGKKEGMYREMYDRAMDGMTNKLLKTTTPSNLMYVSDWDGNRNVHKMDHLVCFVPGMLALGAYSSDGTRGAGNKWRDLKNAKA 389
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK)

HSP 1 Score: 171 bits (432), Expect = 1.050e-46
Identity = 92/180 (51.11%), Postives = 120/180 (66.67%), Query Frame = 1 
Query:   28 VNLSNG--KTGG--GSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSH---DSRRAARDLRTGK 540
            V+L NG   T G  G  ++LSELGTLQ+EFRYLS   G+ +Y R A + F+ L  +   +GL PI ++ N+G F  S++TFGALGDS+YEYLLK W+QGGRRE   R MY+ A+ GV + LVQ+    G  YL++  G R +H+MDHLACF+A  LALGA T     DS RA RD++  K
Sbjct:  299 VHLQNGHGSTPGWTGGNAILSELGTLQVEFRYLSKATGNMEYGRKATKVFEQLRNKPTTNGLVPIYVSINSGNFQGSKITFGALGDSYYEYLLKTWLQGGRREGYLREMYDAAVQGVHDKLVQRTTPSGFLYLADLEGGRVKHKMDHLACFMAATLALGAHTDPQGADSPRARRDMQVAK 478
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A7S1YR71_9STRA (alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR71_9STRA)

HSP 1 Score: 162 bits (409), Expect = 8.560e-45
Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = 1 
Query:   67 SVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPH-GLYPIRINPNTGK--FTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARG-LTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHD---SRRAARDLRTGKA 543
            ++LSELGTLQLEFRYL+   G+  YA    R +D +     P  GL+P+ I     K  F +++++ GA+GDSFYEYLLKVW+QGG++E++YRRMY+ AMDGV + LVQ+  G LTY++E N  R   +MDHL+CF+ G LAL A T+ D   S RA RDLR GKA
Sbjct:  110 AILSELGTLQLEFRYLAKVTGNNDYATLVNRIYDIMEPLQPPDTGLFPLFIGNKGSKPDFGNARISLGAMGDSFYEYLLKVWLQGGKKEDNYRRMYDKAMDGVHKYLVQEQPGVLTYIAEMNNGRINRKMDHLSCFMGGTLALRAYTNPDGLNSDRAQRDLRLGKA 275
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A7S1FMD7_9STRA (alpha-1,2-Mannosidase n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMD7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.310e-44
Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 1 
Query:   58 GSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRI----NPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARG--LTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSH---DSRRAARDLRTGK 540
            GSY VL+E+ TLQ+EFRYL+   G+ KYA T+ + F  L       GLYP ++    + N  +FT++Q++FGA+GDSFYEYLLKVW+QGG++E  YR MY+ ++DG+A  L+QK +   LTY++E +  R QH+MDHLACF+ G LALGA T     DS RA RDL+  K
Sbjct:  249 GSY-VLAEVATLQVEFRYLAAVTGNRKYATTSEKVFHMLKEVEPEDGLYPYKLGWDAHTNKIRFTNTQISFGAMGDSFYEYLLKVWIQGGKKESMYREMYDKSIDGMANKLIQKTKKEKLTYIAERSNGRLQHKMDHLACFMGGLLALGAYTDPGGLDSERAQRDLQLAK 417
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: A0A7S2KLB8_9STRA (alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLB8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.340e-44
Identity = 89/179 (49.72%), Postives = 118/179 (65.92%), Query Frame = 1 
Query:   31 NLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGK---FTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSH---DSRRAARDLRTGKA 543
            N S      G  S+L+ELGTLQLEFR+L+   G + YA  A + F+ +      HGLYPI +  N GK   F+  +++FGA+GDSFYEYLLKVW+QGG+ E  YR M++ +MDG+ + L+QK+   GL YL++    +  H+MDHLACF+ G LALGA T     DS RA RDL+TGKA
Sbjct:  155 NHSYNTAWTGESSILAELGTLQLEFRHLAKATGKQHYADKANKVFEVMKTIEPDHGLYPIFVK-NQGKEPIFSYDKISFGAMGDSFYEYLLKVWIQGGKAESMYRDMWDRSMDGLHKYLLQKSTPSGLYYLADLVDKKLDHKMDHLACFMGGALALGAYTDPNGLDSPRAKRDLQTGKA 332
[Close]
BLAST of Ec-00_002210.1 vs. uniprot
Match: B8C5N4_THAPS (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5N4_THAPS)

HSP 1 Score: 159 bits (401), Expect = 2.440e-43
Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   52 GGGSYS--------VLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRIN--PNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKARG--LTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHD---SRRAARDLRTGK 540
            GG +Y+        VLSE+GTLQ+EFRYL+   G  +YA  AMRA D L       GLYP  I+   N+  F ++ ++ GA+GDSFYEYLLK+W+QGG+ E +YR +Y+ A+DG+ + LV  +R   LTY++E +  + +H+MDHL+CFL GNLALGA T  D   S RA R L+ GK
Sbjct:  132 GGSAYNTGWHKTSAVLSEIGTLQVEFRYLARVTGKSEYATVAMRALDELLKLDTESGLYPTFIHNTKNSLSFANNDISIGAMGDSFYEYLLKIWLQGGKTEGNYRILYDRAVDGILDYLVHSSRPNYLTYVAELSQGKVKHKMDHLSCFLGGNLALGAYTHPDGLASMRAQRQLKVGK 309
The following BLAST results are available for this feature:
BLAST of Ec-00_002210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJU5_ECTSI1.840e-132100.00alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculos... [more]
D7FS40_ECTSI8.580e-115100.00alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L0M9_9PHAE1.050e-9181.05alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LGK4_ECTSI4.150e-5355.17alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S1GA01_9STRA4.750e-5051.38alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2... [more]
A0A7S3XK61_HETAK1.050e-4651.11alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S1YR71_9STRA8.560e-4552.41alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii... [more]
A0A7S1FMD7_9STRA1.310e-4451.18alpha-1,2-Mannosidase n=3 Tax=Corethron hystrix Ta... [more]
A0A7S2KLB8_9STRA8.340e-4449.72alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danic... [more]
B8C5N4_THAPS2.440e-4348.31alpha-1,2-Mannosidase (Fragment) n=1 Tax=Thalassio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2516963..2519125 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.3
Seed ortholog evalue2.8e-94
Seed eggNOG ortholog2880.D7FS40
Preferred nameMAN1A2
Length555
KEGG koko:K01230
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00073,M00074
Hectar predicted targeting categoryother localisation
Gene idEc-00_002210.1
GOsGO:0000139,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005793,GO:0005794,GO:0005802,GO:0005829,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006511,GO:0006517,GO:0006807,GO:0006950,GO:0007275,GO:0007568,GO:0007585,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016020,GO:0016021,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0030163,GO:0030173,GO:0030323,GO:0030324,GO:0030433,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034645,GO:0034976,GO:0035010,GO:0035295,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0042493,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0048286,GO:0048513,GO:0048731,GO:0048856,GO:0050896,GO:0051603,GO:0051716,GO:0060541,GO:0070085,GO:0071704,GO:0072347,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904381
EggNOG free text desc.mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
EggNOG OGsKOG2204@1,KOG2204@2759
EC3.2.1.113
COG Functional cat.G
CAZyGH47
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002210Ec-00_002210Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2516963..2519125 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002210.1Ec-00_002210.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2516963..2519125 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002210.1.6Ec-00_002210.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2516963..2517130 -
Ec-00_002210.1.5Ec-00_002210.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2517557..2517694 -
Ec-00_002210.1.4Ec-00_002210.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2517951..2518049 -
Ec-00_002210.1.3Ec-00_002210.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2518368..2518421 -
Ec-00_002210.1.2Ec-00_002210.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2518861..2518929 -
Ec-00_002210.1.1Ec-00_002210.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2519099..2519125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002210.1CDS:Ec-00_002210.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2516963..2517130 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002210.1 ID=Ec-00_002210.1|Name=Ec-00_002210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=185bp
MRKDHAEFDVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYART
AMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKV
WMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDH
LACFLAGNLALGAMTSHDSRRAARDLRTGKASVL*
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spliced messenger RNA

>Ec-00_002210.1 ID=Ec-00_002210.1|Name=Ec-00_002210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=555bp|location=Sequence derived from alignment at chr_00:2516963..2519125- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAAAGGATCACGCAGAATTCGATGTGAACCTTTCAAACGGGAAGAC
AGGCGGGGGTTCTTACAGCGTACTCTCCGAGTTGGGCACTCTTCAGTTGG
AGTTCCGATATCTGAGTCACGAGGTGGGAGACGAGAAGTACGCCAGAACG
GCGATGCGGGCGTTCGACTTCCTGGCTGGAAGAACAGTGCCACACGGTCT
TTACCCGATTCGGATTAACCCCAACACCGGAAAGTTCACTTCGTCCCAGG
TTACCTTTGGGGCCTTGGGTGACTCGTTTTACGAGTACCTGTTGAAGGTG
TGGATGCAGGGAGGCCGTCGAGAAGAGAGCTACCGCAGGATGTACGAAGA
TGCCATGGACGGTGTAGCGGAGCTCCTCGTCCAGAAGGCCCGCGGACTAA
CGTACCTCAGCGAGTGGAACGGCACGAGGCGGCAGCATCGGATGGACCAT
CTCGCGTGCTTCTTGGCGGGGAACCTGGCCCTCGGTGCCATGACCTCACA
TGACTCACGAAGGGCAGCGAGGGATCTGAGGACTGGAAAGGCGAGTGTTC
TCTGA
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protein sequence of Ec-00_002210.1

>Ec-00_002210.1 ID=Ec-00_002210.1|Name=Ec-00_002210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=185bp
MRKDHAEFDVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYART
AMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKV
WMQGGRREESYRRMYEDAMDGVAELLVQKARGLTYLSEWNGTRRQHRMDH
LACFLAGNLALGAMTSHDSRRAARDLRTGKASVL*
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mRNA from alignment at chr_00:2516963..2519125-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002210.1 ID=Ec-00_002210.1|Name=Ec-00_002210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2163bp|location=Sequence derived from alignment at chr_00:2516963..2519125- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGAAAGGATCACGCAGAATTCGATGCTGAAGGAGAGTGATTAGGAGA
GCAAGACGTTCTCGTATGAAATAAGGCAGAACCAGCATGGAGATGAAATC
TGTTCTGAATGTTGCTTGGTTTCGCAAAAATGTGCGTGATGTCGAAAAAG
GGACGACGATGTGATATTTTCTGATGCCTCTCTTGCGGTGTCACAGGTGA
ACCTTTCAAACGGGAAGACAGGCGGGGGTTCTTACAGCGTACTCTCCGAG
TTGGGCACTCTTCAGGTGCGTATTGTAGTAGCATTCACACCGCCATCATG
TCGTCGAATGGAGCACGTGTGGGACCACGTGACGGATTTTCACTTTCGAG
GAAAATGTCAATGATCCAAACGCAGCCGACATTTCAACCATAACGAGTAT
GTGGCGACGTTACCTTGGGTATCCTTCATGCTTCTGGGGGCTATTCTTCT
TGGAAAACTCCGATCATGTGAACTGGTCGTATGCATGGGTGGTATCGTTG
TAGGGCGAACGTCATCGTGATGGCGACGACGTCGACGACATTTTGTCCTG
GATCCTCGTCGCGTCGTGCCACCACAATCTCAGTGTGGCGCGGTATCTCG
GTCGAGCGCGGGCTTGTCGTACAATCAATCCACCCTTGGCCCCTCTCGAA
ACGGATCCAGTCTTCGTCATGTTGTTGTTGCCTCTACCCTCGACAACATC
TCAGTTGGAGTTCCGATATCTGAGTCACGAGGTGGGAGACGAGAAGTACG
CCAGAACGGTGAGCGTGCTTTGTGGCCGCTTCGCGAACTGATCGACACAA
TTCGGACTCGACCAACGGGTGTTCGGGACCCCGTCGTTACCTCGAGCTGT
GCAATGGATCATTTGGTGGTGATTTGAAGGTTTCATTGCTACGGAAGCAT
GTGGCAAAGATGTCTCTATGCCTGATCCTCACACCGCCAAAGATAACGTT
AATATGTTTGTTCCTAAATAAGGATTCGGACGAACTGACCAGGAGTACTG
AAAAAGCCATCGCGTCAACAACCAACAAGATTGCACACTCACACCCATTA
CCGACGTTTGTCAATGATTTGGCCAGGCGATGCGGGCGTTCGACTTCCTG
GCTGGAAGAACAGTGCCACACGGTCTTTACCCGATTCGGATTAACCCCAA
CACCGGAAAGTTCACTTCGTCCCAGGCAAGTGACCCCAGCAAAAAAGAGT
CAACATATCGCCAGACGCGTGCAAGTTATTCACTCTCCTTCGGTACGTTA
AAGTTAAAAGTATGATTGACGCGGATCGAATAGGTATGTATCACTTCGAA
AAGCTGCAGTACATGTACCCTGCTGCTTTCAATCCGATTGCCGGGTTCCA
CATCCGCACGTATATTTCGCTCTTCACACCATCCCCATGCGTCACTCGAC
TTTTTTTTTCGCGCTTTCTTTGCTTTCTCAGGTTACCTTTGGGGCCTTGG
GTGACTCGTTTTACGAGTACCTGTTGAAGGTGTGGATGCAGGGAGGCCGT
CGAGAAGAGAGCTACCGCAGGATGTACGAAGATGCCATGGACGGTGTAGC
GGAGCTCCTCGTCCAGAAGGTGCGACCGTCCGAACCTCTCCGATCAATCT
GGGGATGCCTCCCTGCCTGGCAGACAATCAAGACCCTTTGGTGCATGATT
CCTGCCGCCTACAACTCAACTGTCATCCTCACCACAAGAAGAAACTTCAA
CACACGCTACTGTTTTCGGTGAATCTTTCATACTTCGACTCCAACCGGTG
TTACTTTTCACCAATGCCGTCGTCGATATCTCGTCCTCGACCTCAGCGGA
TATTAGCTATTACCATACGGAGGGCCGCCTTTGCCGGCGCTGTTGGTGAA
ATGCGATTTTAAGTTTTGTTTTTGAGAAAAGATGTTTGTCGTTTTTTCTT
TCGCTGTCGTTCTTTCTCTCGTTTCTCTCACCCCTCCCCTCATCTCTCCC
CACTGCGCTGCCTTGTTGCACCCCACCTGCCGTGCTGGCATCCAGGCCCG
CGGACTAACGTACCTCAGCGAGTGGAACGGCACGAGGCGGCAGCATCGGA
TGGACCATCTCGCGTGCTTCTTGGCGGGGAACCTGGCCCTCGGTGCCATG
ACCTCACATGACTCACGAAGGGCAGCGAGGGATCTGAGGACTGGAAAGGC
GAGTGTTCTCTGA
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Coding sequence (CDS) from alignment at chr_00:2516963..2519125-

>Ec-00_002210.1 ID=Ec-00_002210.1|Name=Ec-00_002210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=555bp|location=Sequence derived from alignment at chr_00:2516963..2519125- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGAAAGGATCACGCAGAATTCGATGTGAACCTTTCAAACGGGAAGAC
AGGCGGGGGTTCTTACAGCGTACTCTCCGAGTTGGGCACTCTTCAGTTGG
AGTTCCGATATCTGAGTCACGAGGTGGGAGACGAGAAGTACGCCAGAACG
GCGATGCGGGCGTTCGACTTCCTGGCTGGAAGAACAGTGCCACACGGTCT
TTACCCGATTCGGATTAACCCCAACACCGGAAAGTTCACTTCGTCCCAGG
TTACCTTTGGGGCCTTGGGTGACTCGTTTTACGAGTACCTGTTGAAGGTG
TGGATGCAGGGAGGCCGTCGAGAAGAGAGCTACCGCAGGATGTACGAAGA
TGCCATGGACGGTGTAGCGGAGCTCCTCGTCCAGAAGGCCCGCGGACTAA
CGTACCTCAGCGAGTGGAACGGCACGAGGCGGCAGCATCGGATGGACCAT
CTCGCGTGCTTCTTGGCGGGGAACCTGGCCCTCGGTGCCATGACCTCACA
TGACTCACGAAGGGCAGCGAGGGATCTGAGGACTGGAAAGGCGAGTGTTC
TCTGA
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Synonyms
The feature 'Ec-00_002210.1' has the following synonyms
Synonym
Esi1379_0001
Esi_1379_0001
MAN1C1