Ec-00_001930.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_001930.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI) HSP 1 Score: 849 bits (2194), Expect = 2.460e-302 Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 2 Query: 71 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 1624 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD Sbjct: 1 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 518
BLAST of Ec-00_001930.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI) HSP 1 Score: 340 bits (871), Expect = 1.470e-106 Identity = 199/318 (62.58%), Postives = 222/318 (69.81%), Query Frame = 2 Query: 71 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPG---RLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGAR-TNVFCRARSELDDN---VDESGAFPVIVRRGGAASSANSVE 1003 MGKFRGHQD+S RGRE K+LKKK G A GGI A AAQAES V GGDSL S +PG + QQR VG KRKLKHVTYAKEHSVL+VGDG FSF + HRGT AGVVATSLDS KAVLKKYP+AETWLPKLEADG Q + EGR GV+GEK R+ F RVVFNFPHTGAQ THLNR+LI DFFASTKGLVKCAA GG VHVTLKDKPP+SGWN + ++ V DPSVFPGY +STTDPQA +F+A GAR TNV C ARSELDDN V+ FP + + N ++ Sbjct: 1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHA-AAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRP------EGRC------GVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV---PGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEIK 301
BLAST of Ec-00_001930.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.050e-60 Identity = 111/207 (53.62%), Postives = 140/207 (67.63%), Query Frame = 2 Query: 233 RLQQRGVVGAKRKL-KHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTT 850 + Q + A RK+ K V+YA ++L+ GDGDFSFTRG+++HR +GAGVVATSLDS VL KYP A WL +L AD A+V H VDATRLE+ + + + LFDRVVFNFPHTG QR HLNRNL+R+FF S +G VKCA GGEVHVTLK+ PPY+GW +K A + ++ +R LAFDP+ FPGYRH + Sbjct: 61 KKHQSALAPAVRKVPKTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRL-AD-AKVLHGVDATRLEQAV-------------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWEIKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246
BLAST of Ec-00_001930.1 vs. uniprot
Match: G4YGB3_PHYSP (DUF2431 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB3_PHYSP) HSP 1 Score: 180 bits (457), Expect = 1.180e-47 Identity = 97/220 (44.09%), Postives = 132/220 (60.00%), Query Frame = 2 Query: 287 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRL----EETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNV 934 YA E VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V KKYP A+ + + + V H VDAT+L ++ GAG D F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+++ ++ F+ +FPGYRH TTDPQAKKF+ T VF RS++ + V Sbjct: 40 YAAEDDVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESQVRKKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGMKAVPD-------------FFKYIVFNFPHSGQQRVHINRALLLNFFGSARDRL---TAHGEAHVTLKTRPPYSNWFIEDQAKDAGFVLKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRSKVRNRV 243
BLAST of Ec-00_001930.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.690e-46 Identity = 89/225 (39.56%), Postives = 128/225 (56.89%), Query Frame = 2 Query: 287 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVI 961 Y + +L++GDGDF+F++G++ HRG+G ++ATS DS AV KY A T + + A V H +DAT+L++ V + LFD ++FNFPH+G QR H+NR L+ DFF S + +K GEVH++LK+KPPYS WNV+ A+ S ++ F +FPGY H TTDP AKKF+A T VF RS ++ P++ Sbjct: 33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIRQAKAHVLHDIDATKLDQL----------------VHNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRSRYPVPTEQPPKTPLV 238
BLAST of Ec-00_001930.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE) HSP 1 Score: 179 bits (453), Expect = 3.750e-46 Identity = 95/211 (45.02%), Postives = 128/211 (60.66%), Query Frame = 2 Query: 287 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSE 919 YA + +VLIVGDGDFSF+RG+++HRGTG G++ATS DS+ V KY A + +++ V H VDAT+L E G G + +F ++FNFPH+G QR H+NR L+ +FF S + + + GEVHVTLK +PPYS W V+ A+E+ ++ FD +FPGYRH TTDPQAKKFD T VF RS+ Sbjct: 39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLELPQHVQTGTGS---------KTISDVFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---SVHGEVHVTLKTQPPYSNWFVEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLDLCVTFVFVVNRSK 237
BLAST of Ec-00_001930.1 vs. uniprot
Match: A0A225WPB9_9STRA (DUF2431 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPB9_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.940e-46 Identity = 94/220 (42.73%), Postives = 130/220 (59.09%), Query Frame = 2 Query: 263 KRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSEL 922 K++ YA + +VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V KYP A+ + + + V H VDAT+L E G G + F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+ + +M F+ +FPGYRH TTDPQAKKF+ T VF R+++ Sbjct: 26 KQEASTQVYAADDTVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESKVRSKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGL---------KPVPDFFHYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TAQGEAHVTLKTRPPYSNWFIEEQAKAAGFVMKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRAKV 233
BLAST of Ec-00_001930.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT) HSP 1 Score: 175 bits (443), Expect = 4.520e-46 Identity = 101/226 (44.69%), Postives = 133/226 (58.85%), Query Frame = 2 Query: 248 GVVGAKRKLKHVT-------YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRV-LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 901 G GAKR+ +H T YA + +VL++GDGDFSF+RG+++HR TG GV+ATS DSE V +KYP A+ + + + V H VDAT+L E G G KT F +VFNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+ + +M FD +FPGYRH TTDPQAKKF+A T VF Sbjct: 17 GNSGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTG----------TGLKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVF 228
BLAST of Ec-00_001930.1 vs. uniprot
Match: A0A3R7WIN5_9STRA (DUF2431 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7WIN5_9STRA) HSP 1 Score: 178 bits (452), Expect = 5.260e-46 Identity = 100/236 (42.37%), Postives = 136/236 (57.63%), Query Frame = 2 Query: 212 LTSSSPGRLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSE 919 LT S G +R ++K YA + +VL++GDGDFSF+RG+I+HRGTG GV+ATS DSE V +KYP A+ + ++A V H VDAT+L E G G + F ++FNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+++ +M FD +FPGYRH TTDPQAK F+ T VF RS+ Sbjct: 15 LTGSRLGSNTKRQRQDIQKKTLTQVYAPDDAVLVLGDGDFSFSRGLIKHRGTGRGVLATSFDSENEVRRKYPNAQECIAAVQAAHGLVLHDVDATKLLELPRHLKIGTGM---------KTVPDFFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---LVHGEAHVTLKTRPPYSNWFIEDQAKKAGFVMKDRRKFDVRLFPGYRHRTTDPQAKTFEPNLCVTYVFVVHRSK 238
BLAST of Ec-00_001930.1 vs. uniprot
Match: F0W3R3_9STRA (Uncharacterized protein AlNc14C14G1639 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R3_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.920e-45 Identity = 92/205 (44.88%), Postives = 126/205 (61.46%), Query Frame = 2 Query: 287 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 901 Y K S+LIVGDGDFSF++ ++ G ++ATS D EKAV +KY A++ + ++ GA V H VDAT+L++TL V G LFD V+FNFPHTG QR HLNRNL+RDFF S + ++ GEVH+TLK++PPYS W ++ AR+S ++ FD ++PGY+H TTDP AK F+ T +F Sbjct: 28 YTKGSSILIVGDGDFSFSKALLSICECGQRLIATSFDDEKAVFEKYANAKSCIQYIKTHGAYVLHRVDATQLDQTLW-------------RVNG--LTKLFDYVIFNFPHTGQQRVHLNRNLLRDFFQSARTILTPL---GEVHITLKNRPPYSNWQIEKFARDSHYLLKARQKFDSRLYPGYQHRTTDPLAKFFETELCTTYIF 214 The following BLAST results are available for this feature:
BLAST of Ec-00_001930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_001930.1 ID=Ec-00_001930.1|Name=Ec-00_001930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=519bpback to top spliced messenger RNA >Ec-00_001930.1 ID=Ec-00_001930.1|Name=Ec-00_001930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2625bp|location=Sequence derived from alignment at chr_00:2159211..2164552- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. GAGAGAGAGAGAGAGAGAGAGCGTGTCGCTCACTGGCAGCGAACAGCAAAback to top protein sequence of Ec-00_001930.1 >Ec-00_001930.1 ID=Ec-00_001930.1|Name=Ec-00_001930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=519bp MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSback to top mRNA from alignment at chr_00:2159211..2164552- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_001930.1 ID=Ec-00_001930.1|Name=Ec-00_001930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5342bp|location=Sequence derived from alignment at chr_00:2159211..2164552- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:2159211..2164552- >Ec-00_001930.1 ID=Ec-00_001930.1|Name=Ec-00_001930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1557bp|location=Sequence derived from alignment at chr_00:2159211..2164552- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_001930.1' has the following synonyms
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