Ec-00_001690.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001690.1
Unique NameEc-00_001690.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length320
Homology
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BLAST of Ec-00_001690.1 vs. uniprot
Match: D8LEC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC1_ECTSI)

HSP 1 Score: 592 bits (1525), Expect = 7.330e-213
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1 
Query:    1 MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKVGRRSRASTRRNRVPRATVRMGLKEREKGRAGGGQAELAAPXXXXXXXXXXXXXXPIRPSSCSQRADECR 957
            MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKVGRRSRASTRRNRVPRATVRMGLKEREKGRAGGGQAELAAPXXXXXXXXXXXXXXPIRPSSCSQRADECR
Sbjct:    1 MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKVGRRSRASTRRNRVPRATVRMGLKEREKGRAGGGQAELAAPXXXXXXXXXXXXXXPIRPSSCSQRADECR 319
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A835ZE72_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE72_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.450e-26
Identity = 89/263 (33.84%), Postives = 133/263 (50.57%), Query Frame = 1 
Query:   37 FRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSL---------SLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAK------------------------VLGQRFWRKATKRRRKARMVGAD 726
            F W FG  R  +++  L++  LV  +  +  +K   D  R++  +  VD   + K+DI  FF+YF IE S YN RAF+LLAF  +  D +G                      + F +F VSMY+Y T  H  LVRF+F ++++GK +    DV   V+LL +  +R + TT ++M ++D     +V++E F   E++LGSML+PAF+LQK LR K                        VL +RFW +A + R  A   GAD
Sbjct:   13 FLW-FGVSRTDFKRTVLEDRILVEFLAKI-HLK-QVDALRLLAAYNKVDSDRSGKIDIGEFFDYFNIEHSAYNVRAFKLLAFSTQ--DGSGXXXXXXXXXXXXXXXXXXXXAEMSFAEFLVSMYSYCTQSHGTLVRFSFRIISAGKRYITLGDVGAFVALLITNPARHQETTASMMQVLDSEKTGRVAWEQFLANEKKLGSMLYPAFRLQKMLRNKSSTLTASAPAADNRPRSSRAARLQVLSRRFWARAARGR--AANAGAD 268
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0BXL7_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BXL7_PARTE)

HSP 1 Score: 64.3 bits (155), Expect = 6.970e-8
Identity = 45/207 (21.74%), Postives = 99/207 (47.83%), Query Frame = 1 
Query:   91 NEPLVVLVRNMLG------IKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEF----SEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE-FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFW 678
            +E +V+   + +G      +    DV+ + ++F  +D  GT  +  + FFE+   EF    S Y +  F+L+    EQ+                 + F ++  ++  Y     +++V + F ++ S  + F +++D++  +    + K          + ++D    DK+S E FRK ++++  + +PAF+LQ+ LR+++ G ++W
Sbjct:   15 DEQIVISTNSRIGYIQKKFLFSQADVSNLHKIFRKMDTMGTGYISQQNFFEFLDEEFNSVVSPYIEYLFQLIEKEVEQK-----------------VSFSEWLPAISLYCLYTKDSVVAYVFQMLDSDHDNFISKKDLMNFLVQKRNGKKIFYYNYMKAVELLDIERPDKISLEQFRKIQQQIPFICYPAFRLQRELRSRIFGVKYW 204
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A6A3MZN3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZN3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.130e-7
Identity = 58/225 (25.78%), Postives = 102/225 (45.33%), Query Frame = 1 
Query:   52 GFRRALYEQLFLK----NEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 699
            GF     E+ F K    NE L+  +R  LG+      A + ++F  +D   + ++++  FFEY  ++ S ++++A                                 F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:    9 GFATRAREKAFNKSLHLNETLLQTLRG-LGLDHKHLFA-LYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXX-----------------XXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A6A3ZBF7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZBF7_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.900e-7
Identity = 58/225 (25.78%), Postives = 102/225 (45.33%), Query Frame = 1 
Query:   52 GFRRALYEQLFLK----NEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 699
            GF     E+ F K    NE L+  +R  LG+      A + ++F  +D   + ++++  FFEY  ++ S ++++A                                 F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:    9 GFATRAREKAFNKSLHLNETLLQTLRG-LGLDHKHLFA-LYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXX-----------------XXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A225WT84_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WT84_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.340e-6
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 1 
Query:  355 FDQFFVSMYNYGTLLHEALVRFAFDVM---ASGK------EFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGA--DLCREYTKVGR 756
            F +F ++++NY +  H +LVRFAFD+     SG+      E C R+ V G    ++S   ++    D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R    +     D  ++ TK+ R
Sbjct:   11 FIEFVLAVWNYCSFNHASLVRFAFDLYDIDGSGEIEHDEIERCVRE-VWGAGWEVNSNAHKI---VDKLDAIMANTTNNRLSATLFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWARATEKRASINVAALNWDHVKDMTKLSR 151
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BLAST of Ec-00_001690.1 vs. uniprot
Match: G4ZDA4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA4_PHYSP)

HSP 1 Score: 58.5 bits (140), Expect = 1.880e-6
Identity = 45/157 (28.66%), Postives = 79/157 (50.32%), Query Frame = 1 
Query:  244 SEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 699
            S ++++AF ++       DR G          S  + F +F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   + L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:   20 SRFSEKAFSVM-------DRNG----------SGEVDFIEFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREIWGSAWETSSSAQKIVEKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 159
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A0P1B190_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B190_PLAHL)

HSP 1 Score: 54.7 bits (130), Expect = 6.790e-5
Identity = 48/186 (25.81%), Postives = 88/186 (47.31%), Query Frame = 1 
Query:  166 VFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDV--MASGKEFCNRQ------DVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 699
            +F  +D   + ++++  FF+Y  +E S ++++A                                 F ++++NY +  + +LVRFAFD+  + S  E  + +      +V G V   ++   +V    DTL+G    +      F+TF     R   +LFPAF+LQ  ++ K+LG+RFW +AT++R
Sbjct:   50 IFSAMDKDKSGEINMMEFFDYIDLERSRFSEKAXXXXXXXXXXXX-----------------XXXXFVLAVWNYCSFSNVSLVRFAFDLYDVDSSGEITHDEVVKCVREVWGDVWETNANAKKVVGKLDTLIGNTAKNCLSASLFQTFAV---RHPMLLFPAFELQMKIQNKILGRRFWSRATEKR 215
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A7S4A064_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A064_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.160e-5
Identity = 54/227 (23.79%), Postives = 95/227 (41.85%), Query Frame = 1 
Query:   22 CRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNM--LGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLL-AFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIG-----LVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFW 678
            CR  ++   +G+ +++Y     KN  +  L      LG+K D DVAR+   F+ +D  G+  +++    +Y  ++ + + KR F +  A G  Q D                  F +F V+++ Y TL    LV F                        L    +S+ +   N    +  +    + D+V  E F +  R   +ML PAF +Q T+RA+++G  +W
Sbjct:  223 CRNNLYH--YGYFKSIYS----KNAAVRPLRSTFESLGLKED-DVARLHEQFVIIDKDGSGAIELWELLDYLDLQRNRFAKRVFAIFDADGSNQID------------------FKEFVVALWQYCTLGRPQLVMFXXXXXXXXXXXXXXXXXFNAMLKELYGKRYSKNTTAVNLLRHINAMTKRRDTDEVDVEAFAEFCRTHPAMLMPAFAMQTTMRARIMGGAWW 424
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BLAST of Ec-00_001690.1 vs. uniprot
Match: A0A7S2SD95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD95_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.580e-5
Identity = 44/181 (24.31%), Postives = 84/181 (46.41%), Query Frame = 1 
Query:  157 VMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLH-----SEKSRVRNTTD--TLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFW 678
            V + F+D+DL  T ++ ++ F  Y G+  +++++R F +L       D +G            +L F +F V ++NY T     + + AFD+    ++   R D+    +LL       +   +    D   L+  +D +   +V+ + F         +L PAF LQ+ LR ++LG ++W
Sbjct:   61 VFKTFVDMDLDVTGEVSVQQFHSYLGVPQTKFSERVFGILDL-----DGSG------------ALDFHEFCVGLWNYCTYDVRLITKLAFDIFDVDRK--GRLDICECDALLRMVYDVEDLEEIEGPPDGKQLLKEIDVNGDGEVTIDEFSDLMETHQYILSPAFDLQRALRQRLLGIKYW 222
The following BLAST results are available for this feature:
BLAST of Ec-00_001690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LEC1_ECTSI7.330e-213100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZE72_9STRA1.450e-2633.84EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0BXL7_PARTE6.970e-821.74Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A6A3MZN3_9STRA6.130e-725.78Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3ZBF7_9STRA8.900e-725.78Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A225WT84_9STRA1.340e-633.10EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
G4ZDA4_PHYSP1.880e-628.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A0P1B190_PLAHL6.790e-525.81Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A7S4A064_9STRA7.160e-523.79Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SD95_9STRA7.580e-524.31Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1915451..1920420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.5
Seed ortholog evalue4.6e-20
Seed eggNOG ortholog44056.XP_009039936.1
Length960
KEGG koko:K12879,ko:K13754,ko:K17582
KEGG TC2.A.19.4.4
KEGG Pathwayko03013,ko03040,map03013,map03040
KEGG ModuleM00405,M00406
Hectar predicted targeting categoryother localisation
Gene idEc-00_001690.1
EggNOG free text desc.calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential
EggNOG OGsCOG0530@1,KOG2399@2759,KOG4475@1,KOG4475@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko02000,ko03019,ko03041
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690Ec-00_001690Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1913566..1920793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.1Ec-00_001690.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1915451..1920420 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.1.7Ec-00_001690.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1915451..1915513 -
Ec-00_001690.1.6Ec-00_001690.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1916054..1916204 -
Ec-00_001690.1.5Ec-00_001690.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1918082..1918170 -
Ec-00_001690.1.4Ec-00_001690.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1918418..1918686 -
Ec-00_001690.1.3Ec-00_001690.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1919066..1919159 -
Ec-00_001690.1.2Ec-00_001690.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1919556..1919762 -
Ec-00_001690.1.1Ec-00_001690.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1920334..1920420 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.1CDS:Ec-00_001690.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1915451..1915513 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001690.1 ID=Ec-00_001690.1|Name=Ec-00_001690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=320bp
MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDV
ARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQED
RTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE
FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEER
RLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKV
GRRSRASTRRNRVPRATVRMGLKEREKGRAGGGQAELAAPAAAALVVVAR
KKKPPIRPSSCSQRADECR*
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spliced messenger RNA

>Ec-00_001690.1 ID=Ec-00_001690.1|Name=Ec-00_001690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=960bp|location=Sequence derived from alignment at chr_00:1915451..1920420- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGAGGATGCGGCTTCATGCCGGGGCTGCATATTTCGATGGAGGTT
TGGCTTCCGAAGGGCTCTGTACGAGCAACTGTTCTTGAAGAACGAGCCTC
TGGTGGTGCTCGTGCGAAATATGTTAGGCATCAAGGGCGACGGAGACGTG
GCGCGAGTCATGCGCGTCTTCCTAGACGTCGACCTGCGGGGAACACACAA
GTTGGACATCGAGACCTTCTTCGAGTACTTCGGCATCGAGTTCTCCGAGT
ACAACAAGCGAGCCTTTCGACTCCTAGCCTTCGGAGACGAACAGGAAGAC
CGAACAGGACGTAGAGGGTCTTCAAGCAGCAAACGCTCGAGCCTCTCGCT
CAAGTTCGATCAGTTTTTTGTCAGCATGTACAACTACGGCACACTGCTCC
ACGAAGCCCTGGTGCGCTTCGCGTTCGATGTGATGGCGTCGGGGAAGGAG
TTCTGCAACAGGCAGGACGTGATTGGGCTGGTGTCGCTGCTTCACTCGGA
GAAGTCCCGCGTCAGGAACACCACCGACACCCTCATGGGCATCATGGACC
CTCATAACCGGGACAAGGTTTCCTTCGAGACGTTCAGGAAGGAGGAACGG
AGGCTGGGTTCAATGCTCTTCCCCGCCTTCAAGCTGCAGAAGACCCTCCG
TGCTAAGGTTCTGGGGCAGCGGTTTTGGCGCAAAGCTACGAAGAGGCGTC
GGAAGGCTCGCATGGTTGGAGCCGATCTCTGTCGAGAATACACCAAGGTG
GGACGGAGGAGCCGGGCCTCCACCCGACGAAACCGGGTGCCGAGGGCAAC
GGTGCGTATGGGGCTGAAGGAAAGGGAGAAGGGGAGAGCGGGAGGGGGAC
AGGCGGAACTAGCAGCTCCAGCGGCAGCGGCTCTGGTAGTGGTAGCGAGG
AAGAAAAAACCGCCGATCAGGCCCAGCAGCTGCAGCCAGAGGGCAGACGA
GTGTCGATAG
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protein sequence of Ec-00_001690.1

>Ec-00_001690.1 ID=Ec-00_001690.1|Name=Ec-00_001690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=320bp
MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDV
ARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQED
RTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE
FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEER
RLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKV
GRRSRASTRRNRVPRATVRMGLKEREKGRAGGGQAELAAPAAAALVVVAR
KKKPPIRPSSCSQRADECR*
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mRNA from alignment at chr_00:1915451..1920420-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001690.1 ID=Ec-00_001690.1|Name=Ec-00_001690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4970bp|location=Sequence derived from alignment at chr_00:1915451..1920420- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCAGAGGATGCGGCTTCATGCCGGGGCTGCATATTTCGATGGAGGTT
TGGCTTCCGAAGGGCTCTGTACGAGCAACTGTTCTTGGTGAGCATATGAG
TCGTCTCGAATTATACCCGTGCCAATGGCGATTACAGCAGTAGTTGCGGG
ACATATCGAGAACCGCTTAGAACCTGTTCATGTATGACGACTATACAGAT
GTACCATGCATGTGTATACTATCATGTATGCACATGAACATATCGTGGAC
GAAGCCTGCAACTGTACGGCGAAAGCACGACTCCTGCAGGTGCGATTTTT
TAGAGCACATTACGGTTGCCAACTGTATTCATTCGATACTCAAAATGCCC
CGTCTTGGGAAGCGGGAATGTACAATGTGATGTGAGATTCCCGTCTTCGA
CGTTTGCAATGTTTTAGTTGGTTCCCAACAGCGTGTTCACAGCGCCACCG
GTACGTCACCGATATACACCAAGCATGGCTTCCAGCCTTTTCTTGTAGAC
GTATTGTCGACATGGCCCTCATTAGGATGTCAATCCTTCCTCTCGTTGAC
GGCTAGCCTATAGAGTGCAGCGAAATTCCACGCAGGACACCGCACACAGT
TGCCGTCAATGGACTACCCCGCTCGCGCGATATTCGATGATTTTCGCAAC
GATCGCAGAAGAACGAGCCTCTGGTGGTGCTCGTGCGAAATATGTTAGGC
ATCAAGGGCGACGGAGACGTGGCGCGAGTCATGCGCGTCTTCCTAGACGT
CGACCTGCGGGGAACACACAAGTTGGACATCGAGACCTTCTTCGAGTACT
TCGGCATCGAGTTCTCCGAGTACAACAAGCGAGCCTTTCGACTCCTAGCC
TTCGGAGACGAACAGGTGTGAGACAAGCTTAACCCGAGTGTTCAGTCGAA
ACTGACCTTCACCCACAGGCATTCTGTTGCAATGCGACAGCACGCCACCC
GCCACACACCGCAACAGGTGGTGTACATCAGCCGGATGGTTCGCAGCATC
TGTTTGTTGATGCTAGCCTGCATCACCCTTCCTGGGGACAAACATGTCCT
ACAAAGAAAGATACTTCTCATGCTGCTGCCTCGCTTCTCATGTAGTAAGA
TAGACCCGTGTGCACAGGATCCAAGGACAACGTGTTGCAGGATGCACACG
CCGAGTGAGTCTACCACATACTTGTACTTGGATTCCATTTGTTGTGTGCG
GCCAGCTTTTCAATTATTTCCGCGTCCCGTTCCCACTGCGCCTTCGACTT
GTCGTTCGTAGGAAGACCGAACAGGACGTAGAGGGTCTTCAAGCAGCAAA
CGCTCGAGCCTCTCGCTCAAGTTCGATCAGTTTTTTGTCAGCATGTACAA
CTACGGTGAGTAAGGGTCACGCAGACGACTTTGTGCAGTGGGATGAAGTC
TGCACACGTGTAGCACGAACGCCATCCATGTGTCGAAAAGGGATGGTCCG
TCGTGTTAGGAGTCCGAGCCCCCGATTCGGGGCATGAATGGCGGGGCGGG
TAGCACCTCGTAGCCTTTCGGGCCGATCAGAGGGGATACCTGTCACATCA
CCAAGGACGTACGTGCGTGTGAATTTCACTCTTCGGGAACGGGAGATTGC
TCCTGGTGCTACCGCTACTGCCATTCCATTTGTGCACACACTTGTCCAAA
CCCCACCTAATCCCTTCTTGTCAACCCTCGTCGTTCGGTGGAAACAATTC
ACCCTGTGCACCGCGGCGGTCGGTTGCGACTCAGGCACACTGCTCCACGA
AGCCCTGGTGCGCTTCGCGTTCGATGTGATGGCGTCGGGGAAGGAGTTCT
GCAACAGGCAGGACGTGATTGGGCTGGTGTCGCTGCTTCACTCGGAGAAG
TCCCGCGTCAGGAACACCACCGACACCCTCATGGGCATCATGGACCCTCA
TAACCGGGACAAGGTTTCCTTCGAGACGTTCAGGAAGGAGGAACGGAGGC
TGGGTTCAATGCTCTTCCCCGCCTTCAAGCTGCAGAAGACCCTCCGTGCT
AAGGTGTACGCCTGCTGTTGTTAGTTTTGTGTGGGGCCCCCGTTGACATC
ATGCCCTCTACAATTATCGCATGAGACCGTATTTGAGGGACACCCTATTC
CATGCATGGCACATGAACGCACGGGAAAACACGGGCCTCGACGATCTTCG
GAACAGCTGGTCAGCCCACACCCATAGAGAGTGGCCAGACTGCACAATGA
TGCGTGCGCTATGTGTGAGCTCAACGCGTTCTTTCCCCACGGGGTAGCAG
GTTCTGGGGCAGCGGTTTTGGCGCAAAGCTACGAAGAGGCGTCGGAAGGC
TCGCATGGTTGGAGCCGATCTCTGTCGAGAATACACCAAGTGAGTGTTGC
CTGCTGATCAGCCCTTTCGACACCCCGACACCTGACATTCGCCCTGAGCG
TCAACCCTTCGAGCCGATGGGTACAACCCTATTGCGAAGAGCTGTCAGTC
TTTCAGAACGGTCATCAGCGAACACAATGCCCGGCTTTGTGTTTGTACGG
ATAGAATTACCCAAAGTGACCGAGTCATCGCGCATCTCGTTAGATGGCTT
TCGTCTTTCGCCGATACTCTCTTGTTTTTGCCTTTTGTGTGCCGGGCTGC
ACCCATTAAACGGTGATTTTCAGTCCCCCTTGTCATGAGCATACAAACGA
CCTCTTCCGAATCCATATGCGCCAACTGCGTCTGCAAGGTGCTTGTAACT
ACCCGGAACATGCCGGTTATGCTATTAGTTTTTCCACGAAAGATGCACGG
TGCCACAACCAAGCACGGTGTCATTGGAACCATGCGACGGAGAGTAGAGT
GTAGATGCAAGGCTCGTTGTTCAACTTCCCCCCCACTTTTCATATTTATT
GTTCGACGAGACCATGCGCCCCGTGGCGGAGGGGGGGGCAGTATTCGCCG
TTGCCCCTGGTACATAGCGTATATGAGCCAAACCAACACGATCGTGGCAT
TTTTACTCAAGTCGCTGAGGTTCAATTTGTTTCGCTTCTCCGCCTTTTTG
ACCCCGAAGCTCTCCCTTTCGAACTCTAGCGACAAGACGTCCCGCGTACA
CGTCACTTCCACTGTTTTCGAGATCTTGAGTTCCGGAACGAGGCAGGCGG
GTTCCGTGTACGGGACATTTTGCGGGAAGGACAACAACATGGTATGAGCA
AAACCACACCAACGCGTGCATTGAATGCCGCGTCCACGGTGAACGCAAAA
TATCTGTCCCACAGGCTCAGAACCGAGCATGATGGCCTCCGAAACCAGGG
CGATGTAGGAGGGAAGCGGGGAGCAAGCAACAAAACCCCCGCCGGTATTG
TTGCAGGGGGACCCGCGGCGGAAGAGGTACCGATTGAGCAGCTCCAAGCC
TTACCAGTCGTGAAACGCTCAAACACTTCTGCCGTGTCAATTGCAATAAC
CCATGGCGCCTTGTGGTTCGCGGACTGGGTTTCTCTGTCGGGCCCACAAG
GGGGGACTGGTATGCCGAGTTGCGTCACGGGCTACCCCCCCCCCCCCCTC
TGTTTCTACCGGTGCCCCCTCTGGGTCGATAAAGACACCTGGCATGTTCA
AAATATTGAAAGCTCTGTGACAACCGGGTCGCAATGTTGTCCTCTGGGCG
AAATGAGTGTTTTTTTTTTCCCGCTACATCTATTCTGGACGTCCGTCAAC
ACCGACCTTTGGTGAATGCTTAAGAAGCAGCATCTGGAGTCTCACATAAC
AAACTCTCCACGTTTCCTCCAGCGGTGTTTGCCTTCAAATCCTTAACTCG
AAAAGTGTTCGTTAGTCCCTTCTCTCATTATTCTGACAGTTCGATTCGGA
GTTTCCGATCCATGGCTTGGCGTTGTGTCTGTGGTGATGGGTGTTCGGCT
GGGTTGCGAAAGTAGGCGTGGTTCTTCGCTTTCGAGGAGCATTGGTGCCA
CCTCTGTGACAGAAGAATGCCGCGCTACACCATCTATCAGCCACTATCGT
ACCCTGCACGAATGAGCTATTGACAGCAAATCGTAACGACCCGCCGGTCC
ACCCTTGCCGCGCACCCAACACCAACCAATCGTGTCGAGCCGTCCGTAGC
ACCCTCACTGCCCGAGTGGCTCCTCAATCGAAACAGCGACTCGCGGAAGA
CATAAATCTCCATCCGGTGTCCTCAAGGCCACCACTGGCAACAACATTTC
TCTCCTGCCCCATACACCCGCGGTGTATCGGCTGCCCCCCTGTCGCCGTC
GGATATTGTCGTGTAGGGTGGGACGGAGGAGCCGGGCCTCCACCCGACGA
AACCGGGTGCCGAGGGCAACGGTGCGTATGGGGCTGAAGGAAAGGGAGAA
GGGGAGAGCGGGAGGGGGACAGGCGGAACTAGCAGCTCCAGCGGCAGCGG
CTCTGGTAGTGGTAGCGGTGAGTTGTTTGCAACAGGTCCGTGGGGTGGCT
CGATTCTCAGCCAACGGAATTGTATCAACGTGATCCAAATTATCCAACCA
CAGGAACACCAATGGCAACAGCGCCAATACTTGTGGAACTATACTACAGT
AGTTGTTCATTGAAATTCATCGATAAACGAAGAACCCGCGGCGTTGTCAG
AGGTATGGGGGCGAAAGATACCAAGGGGCGTTCTACGAAGTTTAAGTGTT
GGGTACTGCCGGCGTTATATAGGCGTTGGGCCAGGGAGGTTGTAAAAGGT
GTTCTCATGGTGAGGAACGTTCTCGAAAGGACGCGATTGCACACTAACCT
GGTGTCGGCGTAAGCGATTGGGATTTGTTGGGGACGTTCTTATGAAACGG
GAACCGACGGTTCGGTGGGTCCTCGGCAAGGTTGTGATCGTTTGGTGTTT
CTTCATTTCCCTTCCTTCCCGCCCCACGCACCCTCCCGTTCTCTTCTTTT
CCCGACTCCACACACACTATCGCGCCACCGCTCCTCCTACAACAATGCAC
CGCTCAGAGGAAGAAAAAACCGCCGATCAGGCCCAGCAGCTGCAGCCAGA
GGGCAGACGAGTGTCGATAG
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Coding sequence (CDS) from alignment at chr_00:1915451..1920420-

>Ec-00_001690.1 ID=Ec-00_001690.1|Name=Ec-00_001690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=960bp|location=Sequence derived from alignment at chr_00:1915451..1920420- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCAGAGGATGCGGCTTCATGCCGGGGCTGCATATTTCGATGGAGGTT
TGGCTTCCGAAGGGCTCTGTACGAGCAACTGTTCTTGAAGAACGAGCCTC
TGGTGGTGCTCGTGCGAAATATGTTAGGCATCAAGGGCGACGGAGACGTG
GCGCGAGTCATGCGCGTCTTCCTAGACGTCGACCTGCGGGGAACACACAA
GTTGGACATCGAGACCTTCTTCGAGTACTTCGGCATCGAGTTCTCCGAGT
ACAACAAGCGAGCCTTTCGACTCCTAGCCTTCGGAGACGAACAGGAAGAC
CGAACAGGACGTAGAGGGTCTTCAAGCAGCAAACGCTCGAGCCTCTCGCT
CAAGTTCGATCAGTTTTTTGTCAGCATGTACAACTACGGCACACTGCTCC
ACGAAGCCCTGGTGCGCTTCGCGTTCGATGTGATGGCGTCGGGGAAGGAG
TTCTGCAACAGGCAGGACGTGATTGGGCTGGTGTCGCTGCTTCACTCGGA
GAAGTCCCGCGTCAGGAACACCACCGACACCCTCATGGGCATCATGGACC
CTCATAACCGGGACAAGGTTTCCTTCGAGACGTTCAGGAAGGAGGAACGG
AGGCTGGGTTCAATGCTCTTCCCCGCCTTCAAGCTGCAGAAGACCCTCCG
TGCTAAGGTTCTGGGGCAGCGGTTTTGGCGCAAAGCTACGAAGAGGCGTC
GGAAGGCTCGCATGGTTGGAGCCGATCTCTGTCGAGAATACACCAAGGTG
GGACGGAGGAGCCGGGCCTCCACCCGACGAAACCGGGTGCCGAGGGCAAC
GGTGCGTATGGGGCTGAAGGAAAGGGAGAAGGGGAGAGCGGGAGGGGGAC
AGGCGGAACTAGCAGCTCCAGCGGCAGCGGCTCTGGTAGTGGTAGCGAGG
AAGAAAAAACCGCCGATCAGGCCCAGCAGCTGCAGCCAGAGGGCAGACGA
GTGTCGATAG
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Synonyms
The feature 'Ec-00_001690.1' has the following synonyms
Synonym
Esi0013_0137
Esi_0013_0137