Ec-00_001400.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001400.1
Unique Name	Ec-00_001400.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	608

Homology

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BLAST of Ec-00_001400.1 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI)

HSP 1 Score: 1138 bits (2943), Expect = 0.000e+0
Identity = 607/607 (100.00%), Postives = 607/607 (100.00%), Query Frame = 2

Query:   56 MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFEKPPLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEAWQGIPPF 1876
            MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFEKPPLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEAWQGIPPF
Sbjct:    1 MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFEKPPLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEAWQGIPPF 607

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN)

HSP 1 Score: 256 bits (653), Expect = 1.450e-72
Identity = 181/504 (35.91%), Postives = 236/504 (46.83%), Query Frame = 2

Query:  356 LDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRT-------------SGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGL---PLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            L DLL GDF   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  YGT+H KM++  +P  +RVA+ TANF+  D   K+QG+WYQDF  +                S  F+ DL+ +L  +G P   F   L  +DF  ARVALVPSVPG            HKG+D+ KYGH+RVR LL   K   T        + ++CQ SSL SL +   +WL  E   S +P    GKK            +  ++  Q L V+WP+VE VR S +GW +G SI C   NM                   P L   LRKW     ++R    PHIKSY R+      N +E +    E+ W ++TSSNLS++AWG L K  T   +RS+E+GVMFLP LL   S                      G + R  +++G        +   P  LLPLPY  P   Y+       N+ PWV D
Sbjct:   47 LSDLLEGDFSRCLLANYMFDLPWLFTECPRLKEVPVVLVHGER----DRQGMTKECRDYSNVTPVAPPLPIPYGTHHTKMLVALYPERVRVAIFTANFLSNDWNTKTQGLWYQDFGLKVLTDSDEEEKEAVARSSSDFEADLVHYLSSLGAPVKLFCGELKRFDFSSARVALVPSVPGV-----------HKGKDMEKYGHLRVRKLLKMYKIPPTD-------NPLICQFSSLGSLDE---KWLFGEFAESLLP----GKK----------HISSTSMPVQALHVIWPAVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWMPPAELHRQNAMPHIKSYARF------NASEDKAG--ELDWAIVTSSNLSKAAWGSLQKNKTQFMIRSYELGVMFLPPLLGRHSN--------------------AGTSPRL-VTIGSKAAEHSDVAEQPTELLPLPYSFPLTTYN-----PKNDEPWVWD 459

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BLAST of Ec-00_001400.1 vs. uniprot
Match: W2QLN8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QLN8_PHYPN)

HSP 1 Score: 254 bits (648), Expect = 1.080e-71
Identity = 186/521 (35.70%), Postives = 247/521 (47.41%), Query Frame = 2

Query:  311 LSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDF------------PKRTSGSCA-FQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLK-----EGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            L T+PS   +  +  L DLL G+F   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  YGT+H KM++  +   +RVA+ TANF+  D   K+QG+WYQDF             +  SGS + F+ DL+ +L  +G P   F + L  +DF  ARVALVPSVPG            HKG+D+ KYGH+R  ++L           LK        + ++CQ SSL SL +   +WL  E   SF+P    GKK   +           ++  Q L ++WPSVE VR S +GW +G SI C   NM                   P L   LRKWK    ++R    PHIKSY R+       G        E+AW ++TSSNLS++AWG L K  T L +RS+E+GVMFLP LL              + +G   TP  + +T     +   D       P  LLPLPY  P   Y+       N+ PWV D
Sbjct:   33 LKTAPSAH-NLHAKSLSDLLEGEFSRCLLTNYMYDLPWLFAECPRLTEVPVLLVHGER----DRQGMTKECREYSNVTPVVPPLPIPYGTHHTKMLVALYSEKVRVAIFTANFLSNDWNSKTQGLWYQDFGLKVLADSEDEEEETVSGSSSDFEVDLVHYLSSLGAPVKLFCAELKRFDFSTARVALVPSVPGV-----------HKGKDMEKYGHLRSYSILLTYTLCCMNRLLKMYKIPPTDNPLICQFSSLGSLDE---KWLFGEFAESFLP----GKKIISS----------TSMPIQALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWKPPSELHRQNAMPHIKSYARFNPSDDGAG--------ELAWAIVTSSNLSKAAWGTLQKNKTQLMIRSYELGVMFLPPLL------------GRQRNG---TPSRL-VTIASKAAEHSDVAGSDTQPTELLPLPYSFPLTTYN-----PKNDEPWVWD 473

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA)

HSP 1 Score: 253 bits (645), Expect = 4.560e-71
Identity = 184/510 (36.08%), Postives = 243/510 (47.65%), Query Frame = 2

Query:  356 LDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRT------------SGSCA---FQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKK-AEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGL------PLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            L++LL G+F   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  YGT+H KM++  +P  +RVA+ TANF+  D   K+QGVW+QDF  +               S A   F+ DL+ +L  +G     F   L  +DF  ARVALVPSVPG            HKG+D+ KYGH+RVR LL   +   T        + ++CQ SS+ SL +   +WL  E   SF+P    GKK   PT   V           Q L ++WPSVE VR S +GW +G SI C   NM                   P L   +RKW     ++R    PHIKSY R+      N ++  V   E+ W ++TSSNLS++AWG L K  T   +RS+E+GVMFLP LL+ P      GN         C P  +       ++LG       G+      P +LLPLPY  P   Y+  K +     PWV D
Sbjct:   75 LNELLEGEFTRCLLTNYMYDLPWLFAECPRLRDVPVLLVHGER----DRQGMMKECREYSNVTPVAPPLPIAYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGVWFQDFGLKVLDDGEEEKEAVAPNSAAINDFEADLVHYLSSLGAQVKIFCRELKRFDFSSARVALVPSVPGY-----------HKGKDMEKYGHLRVRKLLKMYQVPPTD-------NPLICQFSSMGSLDE---KWLFGEFAESFLP----GKKNISPTPMPV-----------QALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYIRKWTPPEELHRQNAMPHIKSYARF------NPSDEAVG--ELDWAIVTSSNLSKAAWGALQKNKTQFMIRSYELGVMFLPQLLKPP------GN---------CPPVRL-------VTLGSKAAGHSGVAVSESQPTALLPLPYGFPLTTYNPKKDE-----PWVWD 491

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BLAST of Ec-00_001400.1 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM)

HSP 1 Score: 248 bits (634), Expect = 1.250e-69
Identity = 175/508 (34.45%), Postives = 239/508 (47.05%), Query Frame = 2

Query:  356 LDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKR-----------------TSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYR---EVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            L DLL G+F   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  +GT+H KM++  +P  +RVA+ TANF+  D   K+QGVW+QDF  +                 + G   F+EDL+ +L  +G     F   L  +DF  A VAL+PSVPG            HKG+D+ +YGH+RVR LL           + +  + ++CQ SSL SL +   +WL  E   SF+P    GKK          + + +++  Q L ++WPSVE VR S +GW +G SI C   NM                   P L   LRKW     ++R    PHIKSY R+    E AG            + W ++TSSNLS++AWG L K  T   +RS+E+GVMFLP LL   +  +   +      G     G  G+          D E+ +  P  LLPLPY  P   Y+  + +     PWV D
Sbjct:   58 LHDLLEGEFTRCLLTNYMYDLPWLFSECPRLRQVPVLLVHGER----DRQGMTKKCREYANVTPVAPPLPIPFGTHHTKMLVALYPDKVRVAIFTANFLSGDWNTKTQGVWFQDFSLKILDDSEXXXXXXXXTASSRGGNDFEEDLVHYLSSLGAQVKLFCGELKRFDFSRAHVALIPSVPGV-----------HKGKDMERYGHLRVRKLLKT-------FNVPQTDNPLICQFSSLGSLDE---KWLFGEFAESFLP----GKK----------NISASSMPVQALHIIWPSVEDVRNSLEGWNSGRSIPCPLKNM------------------KPFLHKYLRKWTPPSVLHRQNAMPHIKSYARFDPSDEAAGA-----------LDWAIVTSSNLSKAAWGTLQKKKTQFMVRSYELGVMFLPPLL---AHQNGGTSPHLVTIGSKAAAGHSGVE---------DFESSEKQPKELLPLPYGFPLTTYNPKQDE-----PWVWD 480

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL)

HSP 1 Score: 245 bits (626), Expect = 1.570e-68
Identity = 179/525 (34.10%), Postives = 243/525 (46.29%), Query Frame = 2

Query:  299 LYRL--LSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGS----------------CAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            L+RL  L  +P +R +  ++GL +L  G++   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  YGT+H KM +L +PT  RVA+ TANFI +D  +K+QGVW+QDF  +  G                   F+ DL+ +L  +G P   F   L  +DF  A VAL+PSVPG            H G+ +HKYGH+RVRALL           +    H ++CQ SSL SL +   +WL  E   S MP         PT+ +       +TL  + L ++WPSV  VR S +GW AG ++ C   NM                   P L   LRKW    A++R    PHIK+Y R+         + + DG  V W +LTSSNLS++AWG   K  +   +RS+E+GV+FLPS   S    S  G  AA                               +P  L+PLPY  P   Y+  + +     PWV D
Sbjct:   51 LFRLTRLKDAP-ERHNRYAIGLQELFEGEYTQCLLTNYMYDLPWLFASCPRLHDVPVVLVHGER----DRHAMTQECKGYGNVTPVAPYLPIPYGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKALGEDDASEEKKQHQKQAAVADFERDLIEYLSTLGTPVVTFCKELSRFDFSTATVALIPSVPGA-----------HTGKAMHKYGHLRVRALLKH-------FAVAPSDHPLICQFSSLGSLDE---KWLFGEFAGSLMP--------GPTQLA----SGGSTLPIKALHIIWPSVNDVRNSVEGWNAGRAVPCPLKNM------------------KPFLHKYLRKWTPPSALHRQNAMPHIKTYARF---------DPKRDGC-VDWAILTSSNLSKAAWGAYQKNQSQFLIRSYELGVLFLPSA-SSHQHLSVVGTPAANTE--------------------------DSIPTRLMPLPYAFPLTTYNPKEDE-----PWVWD 477

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.780e-68
Identity = 184/521 (35.32%), Postives = 250/521 (47.98%), Query Frame = 2

Query:  329 DRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSCA-------------------FQEDLMGFLFKVGGPASAFAST-LGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVA----WFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            D  +  ++GL +LL G FES LL NYMVD   L+   PRL  VPV +VHG +    D   + + C     V L  P LP  YGT+HAKM++  +P  +RVA+ TANFI +D  +K+QGVW+QDF  +T    A                   F+ DL+ +L  +G   +AF    +  +DF GA VAL+PSVPG            HKG D+ K+GH+RVR LL          K+    + ++CQ SS+ SL +   +WL  E   S +    +GKK       ++   A      Q L ++WPSVE VR S++GW AG ++ C   NM                   P L   LRKW     ++R    PHIK+Y R+     E  T  R D D  A    W +LTSSNLS++AWG L K  +   +RS+E+GV+FLP LLR             K SG   +  ++ +      S   D       P  +LPLPY  P   YD    +     PWV D
Sbjct:  312 DAHNQHAMGLRELLDGAFESVLLSNYMVDVDWLLGECPRLRDVPVLLVHGER----DRGAMLTACRALANVTLVAPPLPIAYGTHHAKMLVAVYPEKVRVAIFTANFIAIDWENKTQGVWFQDFGLKTLSDDAEADAVGSAVTVERGPAELDFEADLVAYLSALGARVAAFCKRHVARFDFSGANVALIPSVPGV-----------HKGSDMEKFGHLRVRKLLQL-------LKVPPSDNPLICQFSSMGSLDE---KWLFGEFAQSLL----KGKKG------ITGTSAPV----QALHLIWPSVEDVRNSTEGWNAGRAVPCPLKNM------------------KPFLHKYLRKWAPPERLHRKNAMPHIKTYARF-----EAPTSGRDDDDAAAGTLDWAILTSSNLSKAAWGALQKGDSQFLIRSYELGVLFLPQLLR-------------KTSGSDSSASKLVVLG----SKAADRSRAGEAPF-VLPLPYSFPLKTYDPKVDE-----PWVWD 747

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.280e-67
Identity = 163/423 (38.53%), Postives = 215/423 (50.83%), Query Frame = 2

Query:  353 GLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDF------------PKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLL 1579
            GL+DLL GDF   LL NYM D   L    PRL  VPV +VHG +    D   +  +C     V    P LP  YGT+H KM++  +P  +RVA+ TANF+  D   K+QG+WYQDF             +  +G+  F+ DL  +L  +G P   F   L  +DF  ARVALVP+VPG            HKG+D+ KYGH+RVR LL   K   T        + ++CQ SSL SL +   +WL  E   SF+P    GK      R++S      ++  Q L ++WPSVE V+ S +GW +G SI C   NM                   P L   LRKW     V+R    PHIKSY R+       G        E+ W ++TSSNLS++AWG L K +T   +RS+E+GV+FLP LL
Sbjct:  172 GLNDLLEGDFTRCLLTNYMFDLPWLFAECPRLRDVPVLLVHGER----DRQGMTKECREYANVTSVAPPLPIPYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVLADSEDEEKEAVAGASEFEADLAHYLSSLGAPVKVFCGELKRFDFSTARVALVPAVPGV-----------HKGKDMEKYGHLRVRKLLKMYKVPPTD-------NPLICQFSSLGSLDE---KWLFGEFAESFLP----GK------RNISS----TSMPTQALHIIWPSVEDVQNSLEGWSSGRSIPCPLKNM------------------KPFLHKYLRKWTPPKEVHRQNAMPHIKSYARFSPNDDAAG--------ELDWAIVTSSNLSKAAWGSLQKNNTQFMIRSYELGVIFLPQLL 529

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BLAST of Ec-00_001400.1 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN)

HSP 1 Score: 244 bits (623), Expect = 3.860e-64
Identity = 180/519 (34.68%), Postives = 234/519 (45.09%), Query Frame = 2

Query:  326 SDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGS---------------------CAFQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            +D  +  +VGL DLLSG+F   LL NYM D A L    PRL  VPV +VHG +    D   ++  C     V    P LP  YGT+H KM+++ + T +RVA+ TANFI +D  +K+QGVW+QDF   T G                        F+ DL+ +L  +G P  AF   L  +DF  A VALVPSVPG            H G    KYGH+RVR +L           +    H ++CQ SSL SL +   +WL  E   S MP      +  PT            +  + L +VWPSV+ VR S +GW AG ++ C   NM                   P L   LRKW    A++R    PHIK+Y R+     + G         V W LLTSSNLS++AWG L K  T L +RS+E+GV+FLP L       S       K  G      E+  +  +                  LPLPY  P   YD      A + PWV D
Sbjct:  635 ADLGAVYAVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLADVPVVLVHGER----DREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYLSTLGAPVVAFCRELERFDFSTATVALVPSVPGY-----------HTGAAKDKYGHLRVRRILQH-------FNVPRSDHPLICQFSSLGSLDE---KWLFGEFAESLMP------RPLPTS---------TPMPIKSLHIVWPSVDDVRNSIEGWHAGRAVPCPLKNM------------------KPFLHKYLRKWTPPAALHRQNAMPHIKTYARFDP--SQPGA--------VDWALLTSSNLSKAAWGALQKNGTQLMIRSYELGVLFLPQL-------SSRSLGQFKVIGVDNNSAEVSSSTVY------------------LPLPYGFPIKTYD-----PARDEPWVWD 1055

[Close]

BLAST of Ec-00_001400.1 vs. uniprot
Match: K3WH37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH37_GLOUD)

HSP 1 Score: 226 bits (575), Expect = 1.890e-61
Identity = 172/514 (33.46%), Postives = 237/514 (46.11%), Query Frame = 2

Query:  347 SVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELP-EYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRT--------------------SGSCA--FQEDLMGFLFKVGGPASAFAST-LGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWL-SEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEAGKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRD 1813
            +VG+ DLL+G+F   LL NYM D   L    PRL  VPV +VHG +    D + + ++C     V L  P LP  YGT+H KM+++ +PT +RVA+ TANFI +D  +K+QGVW+QDF  +T                    S S A  F+ DL+G+L ++G   +AF    L  +DF  A+VALVPSVPG            H G+ +H +                                SS+ SL +   +WL  E  AS +P    GKK       ++   A      Q   +VWPSV+ VR S +GW AG ++ C   NM                   P L   LRKW    A++R    PHIK+Y R    +  +G         + W +LTSSNLS++AWG   K  T   +RS+E+GVMFLP LL + +  +  G+ AA  +  T      G++QR P                +LPLPY  P   YD    +     PWV D
Sbjct:   63 TVGIADLLAGEFTKVLLTNYMFDMPWLFGECPRLHDVPVLLVHGER----DRLAMANECKGYTNVSLVAPYLPIPYGTHHTKMMVVVYPTKVRVAIFTANFIAIDWNNKTQGVWFQDFELKTLDDDDDAERKECASNHNADGSNSVALDFEADLVGYLSRLGTKVTAFCKEELVRFDFSTAKVALVPSVPGV-----------HTGKGMHAFA----------------------------IYFSSMGSLDE---KWLFGEFAASLLP----GKKG------ITATSAPI----QAFHIVWPSVDDVRNSIEGWNAGRAVPCPLKNM------------------KPFLHKYLRKWNPPEALHRKNAMPHIKTYARVDASSEHSGA--------LDWAILTSSNLSKAAWGVFQKNQTQFMIRSYELGVMFLPQLLPASTAFTVIGSKAAAINAGTGISSVSGISQR-PY---------------VLPLPYGFPIKTYDPKVDE-----PWVWD 469

The following BLAST results are available for this feature:

BLAST of Ec-00_001400.1 vs. uniprot

BLAST of Ec-00_001400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE95_ECTSI	0.000e+0	100.00	Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus T...	[more]
A0A833TKC6_PHYIN	1.450e-72	35.91	Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora...	[more]
W2QLN8_PHYPN	1.080e-71	35.70	Uncharacterized protein n=10 Tax=Phytophthora TaxI...	[more]
A0A6A4E9V0_9STRA	4.560e-71	36.08	Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophtho...	[more]
H3GC32_PHYRM	1.250e-69	34.45	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A8K1CIS9_PYTOL	1.570e-68	34.10	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5D6XVY7_9STRA	2.780e-68	35.32	Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID...	[more]
A0A225WPR3_9STRA	1.280e-67	38.53	Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora...	[more]
A0A2D4BMS2_PYTIN	3.860e-64	34.68	Uncharacterized protein (Fragment) n=1 Tax=Pythium...	[more]
K3WH37_GLOUD	1.890e-61	33.46	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1613238..1624841 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	1140.9
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D8LE95
Preferred name	TDBP1
Length	2609
KEGG ko	ko:K10862
Hectar predicted targeting category	other localisation
Gene id	Ec-00_001400.1
EggNOG free text desc.	3'-tyrosyl-DNA phosphodiesterase activity
EggNOG OGs	KOG2031@1,KOG2031@2759
COG Functional cat.	V
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko03400

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400	Ec-00_001400	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1613238..1624841 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400.1	Ec-00_001400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1613294..1624112 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400.1.1	Ec-00_001400.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1613238..1613730 +
Ec-00_001400.1.2	Ec-00_001400.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1614284..1614350 +
Ec-00_001400.1.3	Ec-00_001400.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1614962..1615132 +
Ec-00_001400.1.4	Ec-00_001400.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1615355..1615410 +
Ec-00_001400.1.5	Ec-00_001400.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1616366..1616615 +
Ec-00_001400.1.6	Ec-00_001400.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1621304..1621491 +
Ec-00_001400.1.7	Ec-00_001400.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1622053..1622252 +
Ec-00_001400.1.8	Ec-00_001400.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1622874..1622965 +
Ec-00_001400.1.9	Ec-00_001400.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1623173..1623410 +
Ec-00_001400.1.10	Ec-00_001400.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1623988..1624841 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400	5UTR:Ec-00_001400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 1613238..1613293 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400.1	CDS:Ec-00_001400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1613294..1613730 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001400	3UTR:Ec-00_001400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 1624113..1624841 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1613238..1624841+
coding sequence from alignment at chr_00:1613238..1624841+

mRNA sequence

>Ec-00_001400.1 ID=Ec-00_001400.1|Name=Ec-00_001400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=608bp
MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAAVNSSNSNGGTSQS
KRPASEQGDNKTPSQRKGKRPRSFQPFEKPPLYRLLSTSPSDRASTGSVG
LDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEV
NLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVV
DVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYD
FRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKED
GTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEP
TRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMY
GGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYR
EVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMG
VMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEA
GKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEA
WQGIPPF*

spliced messenger RNA

>Ec-00_001400.1 ID=Ec-00_001400.1|Name=Ec-00_001400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2609bp|location=Sequence derived from alignment at chr_00:1613238..1624841+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCGAGAGAGGCTTTCTCACGCAGCATACAGCATACAGCACACCAACGCAA
ACGGCCATGGTGGATCGGGTGGACCTGACTGCCGACTCCGAAGACGATGA
CCTCCAGGCTGCAATCAGAGCGTCACTATCCAGTCACTCAGACAGCAGCG
GTGCAACCTCCGCTGCTGTCAATAGTTCAAATTCAAACGGCGGCACGTCC
CAGTCTAAGAGGCCAGCGTCGGAGCAAGGCGACAACAAGACACCATCACA
GCGCAAAGGCAAGCGCCCGCGAAGCTTCCAGCCCTTCGAAAAGCCACCGC
TGTATCGCCTGCTTTCTACCTCTCCGAGTGATCGGGCGAGCACCGGCAGT
GTAGGCCTGGATGATTTGCTCAGCGGCGACTTCGAAAGTGCCCTCCTTTG
CAACTATATGGTGGACTACGCGCTGCTGGTTAGATGCGCGCCGAGGCTTG
GGAGTGTGCCGGTTACTATCGTGCACGGTTTCAAGCCCGGGACGCAAGAT
GAGGTGAATCTTCGCAGCCAGTGCGCCGTCAACCCCGGCGTCAAGCTGCG
CTACCCGGAGCTCCCAGAGTACGGCACCAACCACGCCAAGATGATCATCC
TCAAGTTCCCGACAGGGATCCGTGTGGCTGTGCTGACCGCAAACTTCATT
GTGGTGGACGTCACCGACAAGAGCCAGGGCGTGTGGTACCAGGACTTTCC
GAAAAGGACGTCGGGATCATGCGCGTTCCAGGAGGACTTGATGGGCTTTC
TGTTCAAGGTCGGAGGGCCCGCGTCCGCGTTTGCAAGCACTCTGGGCGAG
TACGATTTCCGGGGCGCGAGGGTGGCGCTGGTGCCTAGCGTGCCCGGTAC
AGGTGGGAACACTCCCGGCACCGGCGGGAAGCCTCACAAGGGGAGGGACC
TACACAAGTACGGCCACATGCGGGTGCGGGCTTTGCTCGCTCGGGAGAAG
GAGGACGGCACCGGGGCGAAGCTGAAGGAGGGCGGTCACAAGGTCCTCTG
CCAGATCTCGTCCTTGGCCTCTCTCACCAAAACGCCGAACCGATGGCTTT
CGGAAATTCTGGCGTCGTTCATGCCACTGGAGGATGAGGGCAAGAAGGCA
GAACCAACTAGACGGTCCGTTTCTGAAGACGAAGCTCAGGCGACCCTACT
CGAGCAGCACTTGCGAGTGGTCTGGCCAAGCGTGGAGGCCGTTCGCACCT
CGTCGCAAGGCTGGATAGCGGGAGGATCCATCTGCTGCAACACCGTCAAC
ATGTACGGGGGCAAGTACAAGTGGCCCAACATGGACAACTACAGGTCCAA
CACGCCGCTGCCCGAGCTCCGGCCGCTGCTGCGCAAGTGGAAGGGGAATC
CTGCGGTCAACCGCACCAGAGACGCTCCGCACATCAAGTCCTACCTGCGG
TACCGGGAAGTGGCTGGGGAGAATGGGACGGAGACACGTGTGGACGGGGA
CGAAGTGGCGTGGTTCTTGCTCACCAGCAGCAACCTCAGCCGATCGGCGT
GGGGTTACCTCAACAAGGCGTCGACAGACCTTACCCTCAGATCTTTCGAG
ATGGGGGTCATGTTTCTCCCAAGCCTGTTGCGGAGCCCCTCTCAAGATTC
CGACGATGGCAACGCTGCCGCGAAAGCCTCGGGCTTCACGTGCACGCCAG
GAGAGATGGGGCTCACGCAACGGTTCCCGCTGAGCCTTGGGTACGACTGC
GAAGCCGGGAAGGGTCTTCCGCTTTCGCTGCTGCCACTGCCGTACGTCTT
GCCGGCCCCACGGTACGACTTTGACAAAAGCCAAGACGCTAACGAGCGTC
CTTGGGTGAGGGACCAGGATCAAAACCCGTCTTCTCTGGACCGCAACGGG
GAGGCGTGGCAGGGCATCCCGCCCTTTTGAGACCTTTTTGAGATCTCTTT
GAGACCTTTTTGAGATTCTACTGCAGTGCTGTAGCCGGTGACCGAAGAAC
AGACGCTTGGAGGACACAACTTTGCTCAGAACAACTTCTGCCTGTCTGCA
TGGGCGTGTTGTCTAGTGGTGTCAGCGGTGCAGAGCTGGATGTTTTCGGG
GTTGTCGGGGGGTAATACAATATATCCGTTCACGTCGATGTGCCGCATTA
GTTTTTTCCCAATCTCTGCAGGAGCTCCGCCGCACGGAACGAACGGCCTG
CCGGCGGGTGGGTCGTTCTTGTTGTTTCTTTCTTTCGAAGCACACGTTCG
AAGCGACGGAGCCGTCTGTCCAGCGCGTGAGTACCGTTGTGACAGATGAG
GCGAAGCCCCTCTAATGTAGGTACTGTAGATACATCGAGCACGGACGTCT
CGTCATGGCAGTGGTCAGTGCCAAACACAAGGAAGAGAAGAAGCTTTTGT
TTGGGTAGGGTGGGGCGTATCCTCCATTTGTGTGTACGGACGATGGGCAA
GTGACAAACACGGCAAGTCCAAATATTGGATGAAAAAATACCCTGACATT
GATGAGGGAGACTACTGCATTCGGAAATGCTGAACGGCAAACAAACGTAT
GTGATTCAAAACAAATCGTGAGCAGATACACAGACAGACACCTGGACGAA
AAATCAAGCCGCTTCAGTTCTCAATAGGACACAAACACACGCACACGCAC
ACGCACACG

protein sequence of Ec-00_001400.1

>Ec-00_001400.1 ID=Ec-00_001400.1|Name=Ec-00_001400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=608bp
MVDRVDLTADSEDDDLQAAIRASLSSHSDSSGATSAAVNSSNSNGGTSQS
KRPASEQGDNKTPSQRKGKRPRSFQPFEKPPLYRLLSTSPSDRASTGSVG
LDDLLSGDFESALLCNYMVDYALLVRCAPRLGSVPVTIVHGFKPGTQDEV
NLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVV
DVTDKSQGVWYQDFPKRTSGSCAFQEDLMGFLFKVGGPASAFASTLGEYD
FRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKED
GTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEP
TRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMY
GGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYR
EVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMG
VMFLPSLLRSPSQDSDDGNAAAKASGFTCTPGEMGLTQRFPLSLGYDCEA
GKGLPLSLLPLPYVLPAPRYDFDKSQDANERPWVRDQDQNPSSLDRNGEA
WQGIPPF*

mRNA from alignment at chr_00:1613238..1624841+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001400.1 ID=Ec-00_001400.1|Name=Ec-00_001400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11604bp|location=Sequence derived from alignment at chr_00:1613238..1624841+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCGAGAGAGGCTTTCTCACGCAGCATACAGCATACAGCACACCAACGCAA
ACGGCCATGGTGGATCGGGTGGACCTGACTGCCGACTCCGAAGACGATGA
CCTCCAGGCTGCAATCAGAGCGTCACTATCCAGTCACTCAGACAGCAGCG
GTGCAACCTCCGCTGCTGTCAATAGTTCAAATTCAAACGGCGGCACGTCC
CAGTCTAAGAGGCCAGCGTCGGAGCAAGGCGACAACAAGACACCATCACA
GCGCAAAGGCAAGCGCCCGCGAAGCTTCCAGCCCTTCGAAAAGCCACCGC
TGTATCGCCTGCTTTCTACCTCTCCGAGTGATCGGGCGAGCACCGGCAGT
GTAGGCCTGGATGATTTGCTCAGCGGCGACTTCGAAAGTGCCCTCCTTTG
CAACTATATGGTGGACTACGCGCTGCTGGTTAGATGCGCGCCGAGGCTTG
GGAGTGTGCCGGTTACTATCGTGCACGGTTTCAAGCCCGGGACGTGAGTG
CGGTTGTGTGCAGCGTTGTCGGGTGTTGGAGGACTAGAAGTTTCCCCCAT
GTATGTTCCCGCGAGATGAAAAAGTTTTTGTCTCCTCCTCTGGCGAATTC
GCGCCGTCGTGTTCGATCCCCCCCCTGCATTTATTGTTGCATTCAAGGTA
AATACCACACCGCCTGGACCCATTTCCCTATACAGTAGCTTGATTGGTCT
GCACGACGAGCAGTGGGGGTGCCGAAATGGCGGCACGGGAGCTGCCTCGT
CGAGAGAAATGCGAGAACGTAGCGTTTAGTTTGGAGTGTATTACAGCGGT
AGTACAGCGGAAGTTGAGCTTTGAAAAGGGGGGGGGGGGGGGGGAGGGTA
TCTTGCGCAACAACGGCGGTACTCGCTTGTAAGGAAGCAATGGACGTTCA
ACTTGCCACGACCTCTGGCCCGTGCTTCCTCGATCAAGTACCATTACAGC
GCACGCTACCGAATGGCGTCACGTATGGTCCAAGTCAAGGTCCTATCCTT
GCTCTCTCGTGATACCCGCTCTTGACGCTAACAACCCAAAACACAGGCAA
GATGAGGTGAATCTTCGCAGCCAGTGCGCCGTCAACCCCGGCGTCAAGCT
GCGCTACCCGGAGGTGAGTTTGCTATGACTGAGTGTGTTCTGCTCTGCTG
GCCCACGCGCTGCTCTGAGAAAATAGTTCGTGATAATGCATTTTGATCCT
CAAGTCTTAAGTGACGCGGGCACTCCGCAGAGCACGTGGATCATCCGTCC
CCCGCCAAGCATACTACAAGTTTTTGTTTGCGACACCGCATGGTTGTGGT
TGAGTTGGTCGCTGAATCAGTCCATACACGCACGAACATTTTAAACCGTA
GAAGCACAGATTTGTTGCGGCGAGGGTCATACAATAGTTTGGTGCCGCTC
GTTGAGCTGTGGCTTGGGAAGGGGAGCGAAATACAACGCACACGCGCACG
CGTGTACCCTCATTGCGCGAGCTCTAAATGCCACCCTATCCGGGTGCACC
ATCACCATACACAACCAAGAGAGAGAAGAGGAGATACATGGCCTCCAACG
TTTTAGAGGCCAGGTACAGCACTTCCCGAAGCAGCAGTCAGTATCCCCCA
AAGTCCCAAGGTATCCCATGTATTGTGATTGTGCTGTAAGCACCATGCCT
AGCGGTCATCCATCCTCCTTGATTGTCCTAACCGCCACTCGCCGTCCTCC
CTTTCTGCCCTCCCTCGCTGGCAGCTCCCAGAGTACGGCACCAACCACGC
CAAGATGATCATCCTCAAGTTCCCGACAGGGATCCGTGTGGCTGTGCTGA
CCGCAAACTTCATTGTGGTGGACGTCACCGACAAGAGCCAGGGCGTGTGG
TACCAGGACTTTCCGAAAAGGACGTCGGGATCATGCGCGTTCCAGGTGTG
TTCTGACAGGCCGCCCGCCGACGCTACCGGTCGCATATGACGACGCCACT
GCGCGCCATGGCCCTGTCGAAATTCCCCGTTTTTTTTTTTTGCTGGGCTT
GATGCCACAATTTCGTTTCGCGTAGACTCTTTCTCGGTTGCCCGGCCTCT
TACCCTTATCGCTCCCGCGCGACCGTTACTACTGCTGTCTTGACTGGAAT
ATCCAACGGCACTGCAGGAGGACTTGATGGGCTTTCTGTTCAAGGTCGGA
GGGCCCGCGTCCGCGTTTGCAAGGTAGGGTGCGGTATTGATGGCCTGTTG
TGGCTGGTGCTGCTGCTTCTGCTGCTGTTCAACAGCGGTTCATGTTCTTT
TCTCGCTCTTTAGTTAATTCCTGTAGTGCCTGGCGTGCCTCTGCACATCT
TTTACCATGTAAACCATCACGTTATTCGGTTGCCTGTTCTGAGCACAACG
TTTACGCTTGGGGGCGACGTTTTCGGACAATATTGTCCTGTAATCGAGGG
TTTTTCTTGTCACGTCGCCATGCATTGAATTACAGCATCTATTCATTCTC
GTTCTCACGTTATTATGTTTCAAACCATCCACTAGGCCGGGTTATTTGGA
GATCGTATCGAATTGGACGGAACGTCTCCGGCCACAACAGTGCACCCCCT
CACTGCCGTTGCTCGACGATCATTCTCGCCTATGAGCGTGTGTGTTATTT
GAGCCCGCGGCTGCCGCAGGACAAATCCAATCATACTGACTCGTGGGTAG
ATAGGCAGGGCACCTGGACAAAAACATTCTACATACGCAGGATACAAACG
CACCTCTTGTGGATGCGGATTCCCTTGGGCTTGCATGCACCATGCGTGCG
CCTTGGTGAAGTAATGCTTGTTTCTTTTCGCAAGGCACAAAATGAGGTCC
TTTCGAGGTTCGACAGGCGTACCCAGCCCGCGTCAAGCATCCCATCCCGA
TATCGCCAGTTACAGCAGCAATTGTGTAGTCCCGATGGCATTGCACAAGG
ACGCGGACACTGTTGACCTTTCCAACAACACAATAACTGTCATGTCATAA
ACAAGATACCCACGTGTGTCCATCAACCCGTGTGCATGTCCATACCCATT
TCCATGACCATGACCATGCCAATGCCCATACCCATACTCGTGTCCATCAT
ATGTCCATACCCGCACCCACATACCATGCATACCTGCCGACATACCATGG
TATGATTTTTGTCATTCCCCTTGGACAGCACTCTGGGCGAGTACGATTTC
CGGGGCGCGAGGGTGGCGCTGGTGCCTAGCGTGCCCGGTACAGGTGGGAA
CACTCCCGGCACCGGCGGGAAGCCTCACAAGGGGAGGGACCTACACAAGT
ACGGCCACATGCGGGTGCGGGCTTTGCTCGCTCGGGAGAAGGAGGACGGC
ACCGGGGCGAAGCTGAAGGAGGGCGGTCACAAGGTCCTCTGCCAGATCTC
GTCCTTGGCCTCTCTCACCAAAACGCCGGTGAGGACTACCAGTAGAATAG
TCTAGAGAGACGCGGGCTACCTCTCTTTGGCGGCCAGAGGTGAAGGTGTG
ACGTGTGCACAAATTCGCCCTGTTTTTGTAGTTCAGCTTCCTAGTCTCGC
ACAAACGCGACGTCAGGGAACGCGTGCTGGCGGCGTGTGCAGTTTGATCC
CATGCCAAGAAGCACATCTCTTATGAAGCACTGTGTGGAAGAGAAGGGAG
GTGGCCAAGAGCGAGCGTTCACCCAGACAAGGGATACCGTAGTTGTCCGT
ATTATGGCGCCCATCGTTGATTTTCCACCCATCGGTGTTATGGCACCGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGTCT
CCCAAACGCTCTACTTTCCACCGGAACACTTTCCTCTTTTTCTTACTCTC
CGTCTTTCTAGATCGGTCGATGTTTGCCCATATGAGGAAATGGTCGGTCG
AACCTATATCTCGCACCGGGGGGGGGGGTACTCTTTTGTTTTGCATGTCT
TAACGGTTGGACCATTGACCACCCGTCCTCCAGAGGACGGAGCATTGTTC
CCACAGGACCGATCACCGATGGCCAATCGTTCCTTCCTACTTTGCTAAAG
GTGGCTCAAAAAGGTCTTCCCTATTTTGTCTATGCTAACGATATCCCTCC
CCGCCTTTTCAAACCACTTCCTACTCCCCAGTACAGCTACCGTCCTCTCC
TCTCTATTCCATGCCTCAAACATCTCCCTGTACCTCCCTTCTATTTTTCC
CAGCTCAGTCATGTACACTTCCCTCTCCTGTTCGTACCACGGACATTCCG
CGACTACATGAACACGGTCTTCGCATCCGAAGCCGCAATCACATTTGAAC
TCGTCGTCTTCGTCGTCTACCGTCCAATGTCTTCGTCGACGTTCTCGAAG
GCCTATGTCCCCGGTCCTGAATTTGACCTTGAGCTTTGTCCCTGCATCCA
TTGGTCCATGTAGGTAGTCCTTGAACCCTATTCCTTATTTAAACATTCCG
TACACTTGTAGACCCTCCTTGTCCTTGGTTTCTTTCCTTAGATTCTGTTC
TTCTCTGTCGGCACAAGCAACAGATATCTTCTCCTTGAACCCCTGTAGAC
CCTCCGTTTCCAGCGTTTCATCTTCGTCGATGTCTAACCCTTACATACGT
CCTCTACAATCTTGACCCATTCCGTGGGTTGTCTACCCCTCTTTTTGTTT
GCCCACTTCGCCTCCCATACTATTCTCGGCAACCTCTCCTCCCCCATCCC
GCACATGCGATACTGCCATGTCAGCTTCCTTGCGTCTCTTCCCGACCGTA
GGGATTGGACCCCCAATTCTGCCCTGCCGACTGCATTACTTGTGCGCTTG
GAGCATCCTAGGATGATTTTCGCTGCTTTCATCTGCGCCGCGTCGAGTTC
TTTCACTACCTTCTTATTTCCTTCCCATACTTCTCCGGCGTACTCTAGCG
GCGGTACGATTACGCTCTTCAAAACCGGGGTGCGCAAAAATATCGTGAAC
GGCATGATTTAATTGCATTTCCGCGCCGGTATCGGTGTTAACGCACCCGG
TGCGATATCAACGATATAAAACCTGCTTAAGACGTAAAATTGCGTGCTTC
CGCAAGGTAACGGTACCCTCCGGCCACGTGTCGAACTATATGTAACGATC
GGCTGAGAGGATCCGGTAGGTACCAATTGCCATTCCTTTCATGTGTGTAT
GTCGTATCGTCGAGGTGCGGTACAAATGATTCATGTTCTACGGCAATCCG
TACATCGAATGCACTGAGTCACTCAATCAAGCACACAGAACGCACCCCCC
ACCTCCAACCAACCGAACAAGAAGGAGTTCGTAAACGCTACTGCAACTGT
ACCGGTAACATGCCCCTTGAGGCAGGCAAAGACAGATGGAAACACCGGCC
AACAAATGAGTGGCTTGCCACCAACAAAGGTTGGAAGAAAACAATGCCGT
GCCGTATACCTTTCCCAGCAGGGAGCCACAGCGCCACAGCGTCTGTCTAC
CACAAACTAGCATCAGCTGCGCCATTTTTTAAGTACCGTTACACGCACAA
TTACGGTACTCGTACCAGAAACGCCTGTGTTCGTTTCTTGAGTATCGCAC
CTATCGGTGTCATCGCACCGGGGTGTGTTCACTCAGCACCGTAAAATGGC
CAGTGTGATTTCTTCCGCATCGCACCCATTGGTGTCATCGCCCCGGGGGG
GCGTTGGAAATCTAGAACGAAATCATTTAATTGCATTTCCGCACAGGTAT
CATCGGTGTTATGGCACCCATCCACCCATCGGTGTTATGGCACCGGGGTG
CGATAAAAAACCAAGATAGGAATGATTTAGAAAACGATCGCACCCCGGTG
CCATAAGACGCACAATTACGGTATTATACCATGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATGGCCTTCCACAAAGGGATTTGTCTGTAACACACGCTGTATTGTGC
GTCACGATTCCTTACCGAAGATCCTGTACTTGGTGAAAATAGGTTCCCGT
TGTGGTCCTTCCCACAGTGGTGGAATGTGTCATATAGGAAGGGAAGCAAA
TACGCGAAATTCCTGTGTTTTACTTGAGAAACCTTTGAAAAGCTAGGATA
TTTGATTTTTTCCCCGCTGTTGCTCCTGCTCCGCCTCCATGATCAAATGA
GTCACTATGTGCAACAACCGAGTGCCCCTTAACAATGTTCCAACTGCTGT
GCCTGCTGTGTCTCAGAACCGATGGCTTTCGGAAATTCTGGCGTCGTTCA
TGCCACTGGAGGATGAGGGCAAGAAGGCAGAACCAACTAGACGGTCCGTT
TCTGAAGACGAAGCTCAGGCGACCCTACTCGAGCAGCACTTGCGAGTGGT
CTGGCCAAGCGTGGAGGCCGTTCGCACCTCGTCGCAAGGCTGGATAGCGG
GAGGGTAAGAAAATCGATCCTTGGCATGGTCATGTCTGACAACCCGTCTG
TTCTTCGCCCACATAAGGGTCGTGAGATGCGGCATTTTTGGACTGACTAC
AAAAAGAGACCTGCACATGTGAAGAGTTAGTTTGTTTAGTACACACGGGT
CTGCCCAGCACAATGTTTGGCGCTGCTGTCATGATGTATGGTCTGTCCTC
CCCTTATCGACCTTCCTCGTGTTGAGAGTCAAGGAAATCAAGGCAACAAA
CCATGGCCGCGAGCTCGCACCGCACGCCCCTTTTTTGTTGGCAACGCGCA
TGCCGCACGCCTTGGAATCGGTGATGGTGGTTGTTTTTGTTGTTGTTGTT
GTCTTCACATGAAGTACCGTTCCGATTTCTACTCAATCTGTCTGTATTGA
TCTGTGCATACCACTTGACGTGATGGTGGTGGCCTAGAACCACCCCCGAG
AACAAGGTGTTTAGGATGGACACCTACGGCACCCCGAAGCTAGCCAGACC
TCGGCCACAGCCACACACCGCCTCTGGCACCACCGACTGCCCTCTGGTGC
CCGTCTCTATGGCAGATCCATCTGCTGCAACACCGTCAACATGTACGGGG
GCAAGTACAAGTGGCCCAACATGGACAACTACAGGTCCAACACGCCGCTG
CCCGAGCTCCGGCCGCTGCTGCGCAAGTGGAAGGGGAATCCTGCGGTCAA
CCGCACCAGAGACGCTCCGCACATCAAGTCCTACCTGCGGTACCGGGAAG
TGGCTGGGGAGAATGGTGAGGTCAAGTTTGGAGAGGTCAGGCGGGGAGGG
GTTCGTGGCCTTGGCTTTGTTGGGGTCGAAGGCAACCAACGATGAAACGA
CAAAATGAACCCAAAAGATGTTATTGTTGCACTTTGCCGAAGAGGCTGAT
ATATTTGTGCGCTACCATGCTGCAGGAGTCCCGACCGCAAATGCCGTCTA
CTCTACAACGCTTCGTGCAACTGCGTTGGACCACAAATAAGACACATGTT
CACAAAGGACAAGCCTTGAAAATTTTGTCTCCTTCATCTTCTGCAGAAAG
AGGAGAGGAGAGAGGATTATGTTGGTTGTTCTCGACTGCCGGAGGCAACA
ACTATTGCAAGTGGTATCTTCGTTGAACACTTGCGAGGAAGTTTTGTCGT
TGTTGTTCGAGTGACCTTGGGCAGCGGTAAGGTTACAAACAAGCACAGCT
CCCCCGCGACCGCCGGTTGACCGCCCACCCAGAGCGTGCAGGAAATGAGA
ATTGTACGAACCTCTAAGCCATGCGCACATCGGACAAACGTGGTTCTTCG
ATTCCCGAGTCTGCTGGTGCCATGCTCCGCGGCGTCCTGATTGCCCTCAA
TGCTCTTGGCTTGATTTGGTTGTCGTGTGGCATCAGGGACGGAGACACGT
GTGGACGGGGACGAAGTGGCGTGGTTCTTGCTCACCAGCAGCAACCTCAG
CCGATCGGCGTGGGGTTACCTCAACAAGGTGAGGTTTCCTCAATAAGGAT
GGGAGTTGTCTCATTAAGGACGGGGTCACCTCCATAAGGGTGGGGTTGCC
TCAATATGGTGAGGGTACCTCAATAAGGAAGGGGTTGCCTCAGTATCACC
GGGTCACCTCCATAAGGATGGGCCATTGCTCTACCGACGACGTCATGCGT
TTACACGAGTACCCCCCCCCCGCCCCTTCCGGCAGGCGTCGACAGACCTT
ACCCTCAGATCTTTCGAGATGGGGGTCATGTTTCTCCCAAGCCTGTTGCG
GAGCCCCTCTCAAGATTCCGACGATGGCAACGCTGCCGCGAAAGCCTCGG
GCTTCACGTGCACGCCAGGAGAGATGGGGCTCACGCAACGGTTCCCGCTG
AGCCTTGGGTACGACTGCGAAGCCGGGAAGGGTCTTCCGCTTTCGCTGCT
GCCACTGCCGTACGTCTTGCCGGGTGAGTTCTTGGCCTGACGTGTACGTT
TCGCCGTGGTTGACGTGTTCGCATGAGACTCCGCCATTGTATGTCTCATT
CAAGCCGCATGGCAGTTTCGAAGTCAATTGTGGGTCCCTGATTTATTTGC
GAACGGTGATCCTGTGTTATCCTGTCGCCATGACCAGCGGTTACGCGCTG
TGTCAATGGTTGGAGTGGGGTGGATGTTTTCAAGCTATCGTTTATGGTGC
ATTCGAAGCGACGGCTCCCCCCCCCCCAGCCTGCAACTTGCACTTAAATC
GGCTTCCCAGGGTCATCCGTACGATTTTGTTCAAAGAAGATATAGACGCT
TCATTATGGACGGTGGTGATGTGTTGATGCAGAGACTCATCTCTGTTGGA
GCAGTGTTGCACTCTCTATTCCCGAGTAGACCGTTCGAAGCGGATTGTTT
CAGCGAGAAAAGCTTCGTTCCCCAAAACGTAGTTAGAAGTATGTGAACCA
ACCTGTGCCTCCTCTTTTCACCTTCTTCGCCTTCCTCGGCGCAACGTTTC
TGTTCCTTCTCCTTTCATTGCCTGCAACTGCTTGATTCACCGCCTGGCAG
CCCCACGGTACGACTTTGACAAAAGCCAAGACGCTAACGAGCGTCCTTGG
GTGAGGGACCAGGATCAAAACCCGTCTTCTCTGGACCGCAACGGGGAGGC
GTGGCAGGGCATCCCGCCCTTTTGAGACCTTTTTGAGATCTCTTTGAGAC
CTTTTTGAGATTCTACTGCAGTGCTGTAGCCGGTGACCGAAGAACAGACG
CTTGGAGGACACAACTTTGCTCAGAACAACTTCTGCCTGTCTGCATGGGC
GTGTTGTCTAGTGGTGTCAGCGGTGCAGAGCTGGATGTTTTCGGGGTTGT
CGGGGGGTAATACAATATATCCGTTCACGTCGATGTGCCGCATTAGTTTT
TTCCCAATCTCTGCAGGAGCTCCGCCGCACGGAACGAACGGCCTGCCGGC
GGGTGGGTCGTTCTTGTTGTTTCTTTCTTTCGAAGCACACGTTCGAAGCG
ACGGAGCCGTCTGTCCAGCGCGTGAGTACCGTTGTGACAGATGAGGCGAA
GCCCCTCTAATGTAGGTACTGTAGATACATCGAGCACGGACGTCTCGTCA
TGGCAGTGGTCAGTGCCAAACACAAGGAAGAGAAGAAGCTTTTGTTTGGG
TAGGGTGGGGCGTATCCTCCATTTGTGTGTACGGACGATGGGCAAGTGAC
AAACACGGCAAGTCCAAATATTGGATGAAAAAATACCCTGACATTGATGA
GGGAGACTACTGCATTCGGAAATGCTGAACGGCAAACAAACGTATGTGAT
TCAAAACAAATCGTGAGCAGATACACAGACAGACACCTGGACGAAAAATC
AAGCCGCTTCAGTTCTCAATAGGACACAAACACACGCACACGCACACGCA
CACG

Coding sequence (CDS) from alignment at chr_00:1613238..1624841+

>Ec-00_001400.1 ID=Ec-00_001400.1|Name=Ec-00_001400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1824bp|location=Sequence derived from alignment at chr_00:1613238..1624841+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGGATCGGGTGGACCTGACTGCCGACTCCGAAGACGATGACCTCCA
GGCTGCAATCAGAGCGTCACTATCCAGTCACTCAGACAGCAGCGGTGCAA
CCTCCGCTGCTGTCAATAGTTCAAATTCAAACGGCGGCACGTCCCAGTCT
AAGAGGCCAGCGTCGGAGCAAGGCGACAACAAGACACCATCACAGCGCAA
AGGCAAGCGCCCGCGAAGCTTCCAGCCCTTCGAAAAGCCACCGCTGTATC
GCCTGCTTTCTACCTCTCCGAGTGATCGGGCGAGCACCGGCAGTGTAGGC
CTGGATGATTTGCTCAGCGGCGACTTCGAAAGTGCCCTCCTTTGCAACTA
TATGGTGGACTACGCGCTGCTGGTTAGATGCGCGCCGAGGCTTGGGAGTG
TGCCGGTTACTATCGTGCACGGTTTCAAGCCCGGGACGCAAGATGAGGTG
AATCTTCGCAGCCAGTGCGCCGTCAACCCCGGCGTCAAGCTGCGCTACCC
GGAGCTCCCAGAGTACGGCACCAACCACGCCAAGATGATCATCCTCAAGT
TCCCGACAGGGATCCGTGTGGCTGTGCTGACCGCAAACTTCATTGTGGTG
GACGTCACCGACAAGAGCCAGGGCGTGTGGTACCAGGACTTTCCGAAAAG
GACGTCGGGATCATGCGCGTTCCAGGAGGACTTGATGGGCTTTCTGTTCA
AGGTCGGAGGGCCCGCGTCCGCGTTTGCAAGCACTCTGGGCGAGTACGAT
TTCCGGGGCGCGAGGGTGGCGCTGGTGCCTAGCGTGCCCGGTACAGGTGG
GAACACTCCCGGCACCGGCGGGAAGCCTCACAAGGGGAGGGACCTACACA
AGTACGGCCACATGCGGGTGCGGGCTTTGCTCGCTCGGGAGAAGGAGGAC
GGCACCGGGGCGAAGCTGAAGGAGGGCGGTCACAAGGTCCTCTGCCAGAT
CTCGTCCTTGGCCTCTCTCACCAAAACGCCGAACCGATGGCTTTCGGAAA
TTCTGGCGTCGTTCATGCCACTGGAGGATGAGGGCAAGAAGGCAGAACCA
ACTAGACGGTCCGTTTCTGAAGACGAAGCTCAGGCGACCCTACTCGAGCA
GCACTTGCGAGTGGTCTGGCCAAGCGTGGAGGCCGTTCGCACCTCGTCGC
AAGGCTGGATAGCGGGAGGATCCATCTGCTGCAACACCGTCAACATGTAC
GGGGGCAAGTACAAGTGGCCCAACATGGACAACTACAGGTCCAACACGCC
GCTGCCCGAGCTCCGGCCGCTGCTGCGCAAGTGGAAGGGGAATCCTGCGG
TCAACCGCACCAGAGACGCTCCGCACATCAAGTCCTACCTGCGGTACCGG
GAAGTGGCTGGGGAGAATGGGACGGAGACACGTGTGGACGGGGACGAAGT
GGCGTGGTTCTTGCTCACCAGCAGCAACCTCAGCCGATCGGCGTGGGGTT
ACCTCAACAAGGCGTCGACAGACCTTACCCTCAGATCTTTCGAGATGGGG
GTCATGTTTCTCCCAAGCCTGTTGCGGAGCCCCTCTCAAGATTCCGACGA
TGGCAACGCTGCCGCGAAAGCCTCGGGCTTCACGTGCACGCCAGGAGAGA
TGGGGCTCACGCAACGGTTCCCGCTGAGCCTTGGGTACGACTGCGAAGCC
GGGAAGGGTCTTCCGCTTTCGCTGCTGCCACTGCCGTACGTCTTGCCGGC
CCCACGGTACGACTTTGACAAAAGCCAAGACGCTAACGAGCGTCCTTGGG
TGAGGGACCAGGATCAAAACCCGTCTTCTCTGGACCGCAACGGGGAGGCG
TGGCAGGGCATCCCGCCCTTTTGA

Synonyms

The feature 'Ec-00_001400.1' has the following synonyms


Synonym
Esi0013_0093
Esi_0013_0093
TYDP