Ec-00_001290.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001290.1
Unique Name	Ec-00_001290.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	482

Homology

[Close]

BLAST of Ec-00_001290.1 vs. uniprot
Match: D8LE85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE85_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 3.810e-208
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1

Query:  301 MEVAAAANHYDEMEDEIKTRQMAISKAQAYPASSLERHGMKQPAGATAGSKLAAYRASTTAMTSHNRTTKRFLSPSGPSAQHPSKLQRPQQYRSTSPTRAGSNASSPIGRGRGDANGNGERAGGDEYAGTDYSRDETIDRLTKVLRTKTMEIKHLKADLKRCEAVVRDVDVTVENISSDSAETDMKIVHLADDLAIEKRSHQEAIENIERQSQRLTELEKVSTEKHEENMLLSGRLEEINHLAGQQEQRLQEARVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEKELEKLRQAAEMKAKQLEAVQERASKTNMELQRYKGLARRGRFKRLLAKLWWLLRAIGFLGFLFFAYVAVSEGTFRSRGVDVYRLAH 1443
            MEVAAAANHYDEMEDEIKTRQMAISKAQAYPASSLERHGMKQPAGATAGSKLAAYRASTTAMTSHNRTTKRFLSPSGPSAQHPSKLQRPQQYRSTSPTRAGSNASSPIGRGRGDANGNGERAGGDEYAGTDYSRDETIDRLTKVLRTKTMEIKHLKADLKRCEAVVRDVDVTVENISSDSAETDMKIVHLADDLAIEKRSHQEAIENIERQSQRLTELEKVSTEKHEENMLLSGRLEEINHLAGQQEQRLQEARVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEKELEKLRQAAEMKAKQLEAVQERASKTNMELQRYKGLARRGRFKRLLAKLWWLLRAIGFLGFLFFAYVAVSEGTFRSRGVDVYRLAH
Sbjct:    1 MEVAAAANHYDEMEDEIKTRQMAISKAQAYPASSLERHGMKQPAGATAGSKLAAYRASTTAMTSHNRTTKRFLSPSGPSAQHPSKLQRPQQYRSTSPTRAGSNASSPIGRGRGDANGNGERAGGDEYAGTDYSRDETIDRLTKVLRTKTMEIKHLKADLKRCEAVVRDVDVTVENISSDSAETDMKIVHLADDLAIEKRSHQEAIENIERQSQRLTELEKVSTEKHEENMLLSGRLEEINHLAGQQEQRLQEARVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEKELEKLRQAAEMKAKQLEAVQERASKTNMELQRYKGLARRGRFKRLLAKLWWLLRAIGFLGFLFFAYVAVSEGTFRSRGVDVYRLAH 381

The following BLAST results are available for this feature:

BLAST of Ec-00_001290.1 vs. uniprot

BLAST of Ec-00_001290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LE85_ECTSI	3.810e-208	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1541330..1548145 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	3510
Hectar predicted targeting category	other localisation
Gene id	Ec-00_001290.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001290	Ec-00_001290	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1541330..1548145 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001290.1	Ec-00_001290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1543394..1548145 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001290.1.5	Ec-00_001290.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1541330..1543588 -
Ec-00_001290.1.4	Ec-00_001290.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1544425..1544817 -
Ec-00_001290.1.3	Ec-00_001290.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1545222..1545320 -
Ec-00_001290.1.2	Ec-00_001290.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1546004..1546258 -
Ec-00_001290.1.1	Ec-00_001290.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1547642..1548145 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001290	3UTR:Ec-00_001290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 1541330..1543393 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001290.1	CDS:Ec-00_001290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1543394..1543588 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1541330..1548145-
coding sequence from alignment at chr_00:1541330..1548145-

mRNA sequence

>Ec-00_001290.1 ID=Ec-00_001290.1|Name=Ec-00_001290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=482bp
MVRYPQNTVWRTPEPRRENRLWAAATHPHTGDPRLSSTTGRNRERNLLST
RLENHPPFYRGRSITCSVTSRGEIPTRRPAAPKLLSATQRSCESPRERAN
MEVAAAANHYDEMEDEIKTRQMAISKAQAYPASSLERHGMKQPAGATAGS
KLAAYRASTTAMTSHNRTTKRFLSPSGPSAQHPSKLQRPQQYRSTSPTRA
GSNASSPIGRGRGDANGNGERAGGDEYAGTDYSRDETIDRLTKVLRTKTM
EIKHLKADLKRCEAVVRDVDVTVENISSDSAETDMKIVHLADDLAIEKRS
HQEAIENIERQSQRLTELEKVSTEKHEENMLLSGRLEEINHLAGQQEQRL
QEARVAAAEAAAAAAAAEEAAAAAEKRVEAAEAALAAQGGGGLEKELEKL
RQAAEMKAKQLEAVQERASKTNMELQRYKGLARRGRFKRLLAKLWWLLRA
IGFLGFLFFAYVAVSEGTFRSRGVDVYRLAH*

spliced messenger RNA

>Ec-00_001290.1 ID=Ec-00_001290.1|Name=Ec-00_001290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3510bp|location=Sequence derived from alignment at chr_00:1541330..1548145- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCAGGTACCCTCAAAATACTGTCTGGAGAACCCCCGAGCCACGTCG
CGAGAACAGGCTCTGGGCGGCGGCAACACATCCACACACCGGAGACCCTC
GTCTATCATCGACAACAGGAAGAAACAGAGAGCGAAACTTGTTGAGCACC
CGCCTGGAGAATCATCCGCCATTCTATCGGGGACGGTCAATCACGTGTAG
CGTCACGTCCCGAGGCGAAATCCCAACTAGGCGTCCAGCGGCGCCGAAAC
TTTTGTCCGCTACCCAACGATCCTGCGAGAGCCCGCGAGAGCGCGCCAAC
ATGGAGGTGGCGGCAGCGGCTAACCACTACGACGAGATGGAGGACGAGAT
CAAGACCAGGCAAATGGCCATCAGCAAGGCGCAAGCGTATCCTGCCTCAA
GCCTCGAGCGGCACGGTATGAAGCAGCCGGCGGGAGCGACCGCTGGCTCC
AAGCTAGCGGCATATCGTGCATCCACCACCGCGATGACTTCGCACAACAG
AACCACGAAACGCTTTCTGAGCCCCTCAGGGCCGAGCGCGCAGCACCCTT
CCAAGCTTCAGCGGCCTCAGCAGTATCGCTCGACGTCACCGACACGGGCA
GGCAGCAACGCCTCCTCGCCCATTGGTAGGGGTAGGGGTGACGCCAACGG
GAACGGAGAGAGGGCGGGTGGTGATGAATATGCCGGCACGGATTACAGCA
GGGACGAGACGATCGACAGGCTTACCAAGGTGCTCCGCACAAAGACTATG
GAGATTAAGCACCTGAAAGCCGACCTGAAGCGGTGTGAGGCAGTCGTGAG
AGACGTCGACGTGACCGTGGAAAATATCAGCAGCGATTCCGCCGAAACGG
ACATGAAGATCGTCCATCTCGCTGACGACCTCGCCATCGAGAAACGAAGC
CACCAGGAAGCGATCGAGAACATCGAGCGGCAGTCTCAGAGATTGACTGA
GCTGGAGAAAGTCTCTACTGAAAAACACGAGGAGAACATGTTGCTGTCGG
GACGACTTGAGGAGATTAACCACCTGGCCGGTCAGCAGGAGCAGCGGCTC
CAGGAAGCAAGGGTGGCGGCAGCGGAAGCAGCGGCAGCGGCGGCGGCGGC
TGAGGAGGCGGCAGCGGCGGCGGAGAAAAGGGTAGAGGCGGCGGAGGCGG
CATTGGCGGCGCAGGGAGGGGGCGGGCTAGAGAAGGAGCTCGAGAAGCTT
AGGCAGGCCGCGGAGATGAAGGCTAAGCAATTGGAAGCGGTCCAAGAGCG
GGCGAGCAAGACCAACATGGAGCTGCAGCGCTACAAGGGGCTAGCGCGCC
GCGGGCGTTTCAAGCGTTTGCTGGCGAAGCTCTGGTGGTTGCTCCGGGCC
ATCGGGTTCTTGGGCTTTCTCTTTTTCGCGTACGTTGCGGTGTCCGAAGG
CACCTTCCGATCTCGCGGTGTTGATGTCTACCGGTTGGCGCACTGATTTG
TCGCTGGTTCTCTTAATTCGTTTCCCGATTTTCTTGGTGGCCTTTTGTGT
GTGAGCGTTGTTCGTTTTTTTTTTTTGTTGTCGCAAAAGTCGACTGTCGG
GGTGTGCGGCACGGACGGCCGCGAAGACCAGTTTTGGTTCATGAGTCGAA
GACAAGGAAGGTTGCGCATGATTGCGTTGTCGTTGTTGTTGTTGAGATGA
AGGAAAACGTGTCTGTAAGTTTGGTGTGGTACAAAGTGGGAGTGAGTGTC
TCGCGCGACGAAAGCCACCTCATGAGCGTCTTGGGCGGAAAAGTGGCGAC
ACCATGAGAACCGAAAAAGTATGCACGGGAAATTTTTTCTATCTGCTGTT
GGTGTTCTTTCCCACCTCGAAGCTGCCGTTGTCGTGTCGTGGTATTCTCC
TCGGGGTATTGTATCATTTGTCACTTGTGTTTGTTTCCTCGTTAGGAGTA
TGATACGCATGACCTTCGTATGCATATAATATGGTCTTGTGTCCGCATGA
GGAAGAGGAGCGATGTAGCTGGGTCATGATGTTGATGATGTGGGTGTAGA
GCCGCTTCGGACTCCATCCGCTTTTTTGCGGCAAGTCCGAGCCAGACGCG
CCACGATTAGACAAGTTCACGACACCGTATCCTCTCTAAGTTGACCTGAA
AAAAATACCGGTCAGGTATGCAATAATACGTACGGCTACCGGAATTCGAC
GACGAAACTGTCTCGACAAGTCGGAGAGGATACAAAGTGACCCCGGTCGT
GTGGAGAGTTTCAAGCGCAGATTCGGCCGCTCCTCGATATTTGCATGATA
CTGCTGTACGGTGCGGTATTGCCGAACGGGACGGGTTTCCAGTGTTGCAA
TACCATGCCAGAAATGAGTGAGCTTTCCCCGGGGGTGCCTCGCTGAAGTG
CGGGTTTCGGCTGGGACGTGCTACGATGAGTCTTGTTTCTGCCCCATAAG
TTAGCTGGACTGAAAAGGTCCGAGACGAGAGCTTTAACGTTAGGTGGCAA
ATGATGAAGGGACAAAAGATGGAAATTTTTACATAACGTACAACTTGTTC
TTGTAGTCGTAGCGAACAGGTACCACCTACCCTAGAGTTCTGTTTGGGTG
GAAAGAAACCCAAGGACTGATACGAGGTATGCATATGGAAGATGGGACCT
GACGCCGAGACCTTCGCTGCTTTGTTCATGTTTTTTCAGAGGTTTGTGCT
ATTATTGTCGGTCGAAATCAGAGATGGAAAGGGAAGGACAATCGGTGCAC
GTGATTGCCTTTGCTCATGTCCTGAAAAATCGCTCCGCGAGAGTTTTTCT
ACACAGACAGGCGAAAAGGGCTTGGATGCGAGAAGGCGTGGTGTTGTAGG
GGAGCCTTCTTCGTGGGCCCCAACTGTATCGTGGATTCAGAATAGGCAGC
GGAGATAGAGGGGCTTGAAGGGACTCTGCGCACGGGCGGCCCTCGTAGTT
GTTGAGTTGGGGTGATGCAGTACAACGCATGGCATGATGCCCTGCTTACC
GCGCTCGTAGCGGAATGGGTGATCTGGGTTCGTAGCCTGTGTTCAAGTGA
TCGGCGTCTCTTCTGATGTGTACATCCTCAATTGTTCTTCTCCGCGGTCT
GGGAAGTATTTGTCAGAATTCGTAGAAATAGCGTGCGTGTTGAGCGTGAA
CGTGCAAGAAGTTGTATGCCGCGTCATCGTGCGCATACGTTGAAAATAGT
TTGACTTGCGGCGTGCCAGTGCCCTGTAGTTCACCAGTGGCACATAGCGG
TCTTACAATTGTACCCACGACCAGAAAAACGGCTTATTGGCTCTCCCTTT
GAACGTGAGCGTGTCGACGACGTCGATATGTGTGCAAGTTCCCGAGGGAA
GTAGGCGAGGTGACTGTCTTGTATACAAGAACTAAACACACAAGGCACGT
GTTGTATCGCTGTGTGAGCGCATCACGAAGAAGGGCAGCGGGTGCGCTAA
CAATTCGGCAGCATACGCAGCGAAAAGCAAGAACGTTGGCAATTTACAGC
AAGAGGCGGAGAGGTGGCGCCGCCCGTTGACCGAATTTCAAAGCCCGATT
GCCCTACAAA

protein sequence of Ec-00_001290.1

>Ec-00_001290.1 ID=Ec-00_001290.1|Name=Ec-00_001290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=482bp
MVRYPQNTVWRTPEPRRENRLWAAATHPHTGDPRLSSTTGRNRERNLLST
RLENHPPFYRGRSITCSVTSRGEIPTRRPAAPKLLSATQRSCESPRERAN
MEVAAAANHYDEMEDEIKTRQMAISKAQAYPASSLERHGMKQPAGATAGS
KLAAYRASTTAMTSHNRTTKRFLSPSGPSAQHPSKLQRPQQYRSTSPTRA
GSNASSPIGRGRGDANGNGERAGGDEYAGTDYSRDETIDRLTKVLRTKTM
EIKHLKADLKRCEAVVRDVDVTVENISSDSAETDMKIVHLADDLAIEKRS
HQEAIENIERQSQRLTELEKVSTEKHEENMLLSGRLEEINHLAGQQEQRL
QEARVAAAEAAAAAAAAEEAAAAAEKRVEAAEAALAAQGGGGLEKELEKL
RQAAEMKAKQLEAVQERASKTNMELQRYKGLARRGRFKRLLAKLWWLLRA
IGFLGFLFFAYVAVSEGTFRSRGVDVYRLAH*

mRNA from alignment at chr_00:1541330..1548145-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001290.1 ID=Ec-00_001290.1|Name=Ec-00_001290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6816bp|location=Sequence derived from alignment at chr_00:1541330..1548145- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTCAGGTACCCTCAAAATACTGTCTGGAGAACCCCCGAGCCACGTCG
CGAGAACAGGCTCTGGGCGGCGGCAACACATCCACACACCGGAGACCCTC
GTCTATCATCGACAACAGGAAGAAACAGAGAGCGAAACTTGTTGAGCACC
CGCCTGGAGAATCATCCGCCATTCTATCGGGGACGGTCAATCACGTGTAG
CGTCACGTCCCGAGGCGAAATCCCAACTAGGCGTCCAGCGGCGCCGAAAC
TTTTGTCCGCTACCCAACGATCCTGCGAGAGCCCGCGAGAGCGCGCCAAC
ATGGAGGTGGCGGCAGCGGCTAACCACTACGACGAGATGGAGGACGAGAT
CAAGACCAGGCAAATGGCCATCAGCAAGGCGCAAGCGTATCCTGCCTCAA
GCCTCGAGCGGCACGGTATGAAGCAGCCGGCGGGAGCGACCGCTGGCTCC
AAGCTAGCGGCATATCGTGCATCCACCACCGCGATGACTTCGCACAACAG
AACCGTAAGCCGCTGACAACACCTTCCGTGTGGTTTGATTTGGGTATGCG
GCTGGGTGTGAAAGGTTCTACCCCAGGCCGATTAAAACTTGTGCGCTGTT
GAAAGAGATTATTTCAGGGGCGCATGGCGGCAAAGTTTTTCATTCCTGTC
ATCTTGTCGGTTTATTTCGCTCACATCCTATGATACTGCTGTGGTCTTCA
GCAGCCTCTCTCGCAGACTATTTTATAGGTAACTTGGGGGTGATGCGGTG
GCACACAGCAGTCTAATGCTGTTTACATGAGAGTTGGGCCGCACTCTCTA
CCTCGCCTCCAGGTTAGGGCAAGTTTGCCATCCACAGGCAGTAGTGTGGG
CTTGCTTCAACTCGGTGATGGACTTGTGAGCCAACGGTATTCATCCGCCT
CTGTACCAAGCTTGTGCGCCAATACAAGATCCATCCAGCGATTACGGATA
TCTGCTAGGTACTGCTGTCGGGCGAGGGGGAAGTGATTGTTTCTCTCGTT
CACGAGATTAAAGACCACCTAACGCTAAACCTCTCCCTGAACATAAGGGC
AATGAAACAATTGGAAAGTTGTGTTTACCGTACATAGTGCTGCATGGCTC
CGTGGCTGTCCCGACAAATGCGGCATGCACATTCCTACCCTGGCCTTCCA
TACGATTACTCCACACCCCAATCTCTCCTGCAGGTACATGTCCCCCCCCG
CCCCATCTGTGAAACCCAACATTCTCGTAGAACTACTGCCTTCCCTAGAG
TAGACGTGCACGATTGCCTCCTCGCGGTGGCTGGCCCTGACCTGACGTCA
GCGAAACGGCTGTTGTTTGACGCTGCTGTTTGATTCCACATGGGGGTATG
GTGCGGTCAAGCACAAGGCATCTATTTTTATTGTGCGTAGCAGTTGAATA
TTTCAGCCCCCATACCACTCCAATTGTCTTTTGTGCTACATCGTGGTCGT
GTTGTTTGTCGCAGCAGACACAGCGACCTGAAACGTCTCGCAGCTCACTG
CTGAGGATGCATTCATTTGAAACAAACCCTTACCCTTCCCTTTTCACGGG
CCTCGTGTCTGTCTCCCGACAAGATGCTATCGCCCTCTTCAGAGCGCAGC
ACGTGATTTAACCGATACCCCCTGTCGATGCTACGATACGACCGTTGCAA
GTACCCACATGTTACTTAGCGATCCAATCGACGGATCGACGCTTAGGAGA
GTGTTCTTGCTTGGGGCGAGACAGCCATTTCTATCGTTGCCCTATCAACA
TCTTTCACTTGACACAATCGGGTACAACAACCCTTCGCGCGGCAGGGGAT
CATCGCCACACGCGTTCGCAGGCAACGTCACCCTCACCGAACCCCTTCAC
CGTACACGTACACCGCCCCTGTCCTTTTTGTTTGCAGACGAAACGCTTTC
TGAGCCCCTCAGGGCCGAGCGCGCAGCACCCTTCCAAGCTTCAGCGGCCT
CAGCAGTATCGCTCGACGTCACCGACACGGGCAGGCAGCAACGCCTCCTC
GCCCATTGGTAGGGGTAGGGGTGACGCCAACGGGAACGGAGAGAGGGCGG
GTGGTGATGAATATGCCGGCACGGATTACAGCAGGGACGAGACGATCGAC
AGGCTTACCAAGGTGCTCCGCACAAAGACTATGGAGATTAAGGTGAGCGA
GAGCAGCAGAGGGGTTAGGAGCGAATGCGTGCTTAGTTGCAAAGATGGCT
TGCTGGTGAAGCTTTGAACGAACGCCTGGTGTGTTGTGCTTTTTGGCCGT
TCGCAAAATGGTTGTATCCACAACAACATTTCCGACTACAAGTATCACTC
TCAACATTGCTCGCCGAGAAGATGCAACCGGAATCGCTACAATTACATGT
ACGCAGAGAGCCGCAACGTTTGTTGCGTTTCTGGGTCATCTTCCGCGTGT
TGTCTGCTATCGCTATCGCGGTGGGTGGTCGGTCGTGTGGAGCTCCAGGA
CAATAGTTGGCAAATCCTAACCGTGCAAAACACCGGTTTGAGAGACAGGG
GAGGGAGAGAAAGGGCTAACGTAAAGGCTGATGTCTTTGCTGCGGCTCGT
TGTGGCAACAACACCCTAGAGTCTCCGTGGACACAAGCTTCGAAGTCGAG
CTCCGCCAGCAAGATTCGAAAGCACGATGTACTAGGGATACAGCAGCCAG
TAACGCGTATATTGGGCAGCGCCTCGTTCCCCCTTGATAATTGCTCAATC
AAGTGTTGACAACATGTCGCTTTTGGTTTTTGCGCTTGCTCTTGGGGCGG
ATGGCCGATTTTAAAAGATGCCCCGCGTTTGTTGTTGTTCTTGCTCGGCG
ACCTCTCTGCTGTCTTTTGGACCAGCACCTGAAAGCCGACCTGAAGCGGT
GTGAGGCAGTCGTGAGAGACGTCGACGTGACCGTGGAAAATATCAGCAGC
GATTCCGCCGAAACGGACATGAAGGTGAGTATTTACCTATGCATGTGGCA
TCATCCGTTCTTCTGAAAAAGTGTCGGCAGCTAGTGAATACTTGTAATGG
TAAGAGCATCTGTTGCGATTCGATCGTTGTTGGCGCAGCTATTCGTACGA
GGAGTGGTAGAGGAAAATTCTCGCGTTTGTTTTCCTTCTTTTTTTCTGGC
GTCCCAAGCATTCGGGACGTTCTTTTATGACACCTTTCGGTTTATTTTTT
TGACGCATCAACCGGGATCACGAACGATCAAGACCACACGGGAGTAGTTT
TGTTTTACTGGTGCGATCAGAGAATCACGCCAACGAAATACAGAAGACCG
TTTGCCGCGTGGATCGACCTGATTGGCTGCTTGTGAACGGCTCGAACGTT
TGTTATTTTGTCGGCGGTTGGTCGACAGATCGTCCATCTCGCTGACGACC
TCGCCATCGAGAAACGAAGCCACCAGGAAGCGATCGAGAACATCGAGCGG
CAGTCTCAGAGATTGACTGAGCTGGAGAAAGTCTCTACTGAAAAACACGA
GGAGAACATGTTGCTGTCGGGACGACTTGAGGAGATTAACCACCTGGCCG
GTCAGCAGGAGCAGCGGCTCCAGGAAGCAAGGGTGGCGGCAGCGGAAGCA
GCGGCAGCGGCGGCGGCGGCTGAGGAGGCGGCAGCGGCGGCGGAGAAAAG
GGTAGAGGCGGCGGAGGCGGCATTGGCGGCGCAGGGAGGGGGCGGGCTAG
AGAAGGAGCTCGAGAAGCTTAGGCAGGCCGCGGAGATGAAGGCTAAGCAA
TTGGAAGCGGTCCAAGAGCGGGTAAGGCCACGCAGAGCTCCATTGCCTAG
GTTGTTTATGTGTTTTGTTGCCGTTGATGACGATGGTGGTGTTTGGTGAT
GTGCCTGTGGTACTGCGTCCTTGAATCGTTGTGAGTACAGGGGTACACGC
GTGTCTAGTGCCGGAGTTCCAGATGCCGCCGGTGTGGTCCGGTGCGGTTC
ACTCGCTTTCTTTAGTATGGAGTGTGAAGGCGTTTACGGGGTGCGTGTGT
AGAGAGGTTATTCTTGCATGTGCAGTGCGGGTTGCAGCGTGTACGCTGCG
GTTTTCTTGAAATACTGATGCGGTATACCACGTGTACGGTGCGGTTGCGT
TACATGCGCGCCATGCGGCTTCAAACACGTTTCAAAATCCATGGGCCAGA
TGCAATTATAGTGTTCCCCCGCCCCGGGGGCTGGGTTCTTCACATCCACG
CTACGTTGGAGTGGGCAGTACACGATTTTCACCGATTTTGGAGTCAGTGC
AACCACTCGTGATCACAACTACCGTCGTGGCGGTGGTATTAAAATCAAAG
GCTAAACAAAACCACTGTGATAGCTGTGCGCTCGTGGTTCGCAGGCAGAG
GCGCAATCATGCCATTTCCTCTATGTCGAGACAGCAGTGTCCATAATGGT
GTTGGTGGGCCCATGTAGGTGTGAGCGAAAAAAGCGGAAGCCCAAAAGGA
TCTGTTTTCGCGGGGTTTTGGCACGAATGTGCATGCTCACCAAGACACGT
TCGTTACCTAGGGCCATGTGGAATCGCCACTACCGTATTAGCGCGGTCAC
TTCAGCGCCCGAACCACAATACCCCTCTCTATGTCGAACTCCACCGCCGG
TTGCCAGGCGAGCAAGACCAACATGGAGCTGCAGCGCTACAAGGGGCTAG
CGCGCCGCGGGCGTTTCAAGCGTTTGCTGGCGAAGCTCTGGTGGTTGCTC
CGGGCCATCGGGTTCTTGGGCTTTCTCTTTTTCGCGTACGTTGCGGTGTC
CGAAGGCACCTTCCGATCTCGCGGTGTTGATGTCTACCGGTTGGCGCACT
GATTTGTCGCTGGTTCTCTTAATTCGTTTCCCGATTTTCTTGGTGGCCTT
TTGTGTGTGAGCGTTGTTCGTTTTTTTTTTTTGTTGTCGCAAAAGTCGAC
TGTCGGGGTGTGCGGCACGGACGGCCGCGAAGACCAGTTTTGGTTCATGA
GTCGAAGACAAGGAAGGTTGCGCATGATTGCGTTGTCGTTGTTGTTGTTG
AGATGAAGGAAAACGTGTCTGTAAGTTTGGTGTGGTACAAAGTGGGAGTG
AGTGTCTCGCGCGACGAAAGCCACCTCATGAGCGTCTTGGGCGGAAAAGT
GGCGACACCATGAGAACCGAAAAAGTATGCACGGGAAATTTTTTCTATCT
GCTGTTGGTGTTCTTTCCCACCTCGAAGCTGCCGTTGTCGTGTCGTGGTA
TTCTCCTCGGGGTATTGTATCATTTGTCACTTGTGTTTGTTTCCTCGTTA
GGAGTATGATACGCATGACCTTCGTATGCATATAATATGGTCTTGTGTCC
GCATGAGGAAGAGGAGCGATGTAGCTGGGTCATGATGTTGATGATGTGGG
TGTAGAGCCGCTTCGGACTCCATCCGCTTTTTTGCGGCAAGTCCGAGCCA
GACGCGCCACGATTAGACAAGTTCACGACACCGTATCCTCTCTAAGTTGA
CCTGAAAAAAATACCGGTCAGGTATGCAATAATACGTACGGCTACCGGAA
TTCGACGACGAAACTGTCTCGACAAGTCGGAGAGGATACAAAGTGACCCC
GGTCGTGTGGAGAGTTTCAAGCGCAGATTCGGCCGCTCCTCGATATTTGC
ATGATACTGCTGTACGGTGCGGTATTGCCGAACGGGACGGGTTTCCAGTG
TTGCAATACCATGCCAGAAATGAGTGAGCTTTCCCCGGGGGTGCCTCGCT
GAAGTGCGGGTTTCGGCTGGGACGTGCTACGATGAGTCTTGTTTCTGCCC
CATAAGTTAGCTGGACTGAAAAGGTCCGAGACGAGAGCTTTAACGTTAGG
TGGCAAATGATGAAGGGACAAAAGATGGAAATTTTTACATAACGTACAAC
TTGTTCTTGTAGTCGTAGCGAACAGGTACCACCTACCCTAGAGTTCTGTT
TGGGTGGAAAGAAACCCAAGGACTGATACGAGGTATGCATATGGAAGATG
GGACCTGACGCCGAGACCTTCGCTGCTTTGTTCATGTTTTTTCAGAGGTT
TGTGCTATTATTGTCGGTCGAAATCAGAGATGGAAAGGGAAGGACAATCG
GTGCACGTGATTGCCTTTGCTCATGTCCTGAAAAATCGCTCCGCGAGAGT
TTTTCTACACAGACAGGCGAAAAGGGCTTGGATGCGAGAAGGCGTGGTGT
TGTAGGGGAGCCTTCTTCGTGGGCCCCAACTGTATCGTGGATTCAGAATA
GGCAGCGGAGATAGAGGGGCTTGAAGGGACTCTGCGCACGGGCGGCCCTC
GTAGTTGTTGAGTTGGGGTGATGCAGTACAACGCATGGCATGATGCCCTG
CTTACCGCGCTCGTAGCGGAATGGGTGATCTGGGTTCGTAGCCTGTGTTC
AAGTGATCGGCGTCTCTTCTGATGTGTACATCCTCAATTGTTCTTCTCCG
CGGTCTGGGAAGTATTTGTCAGAATTCGTAGAAATAGCGTGCGTGTTGAG
CGTGAACGTGCAAGAAGTTGTATGCCGCGTCATCGTGCGCATACGTTGAA
AATAGTTTGACTTGCGGCGTGCCAGTGCCCTGTAGTTCACCAGTGGCACA
TAGCGGTCTTACAATTGTACCCACGACCAGAAAAACGGCTTATTGGCTCT
CCCTTTGAACGTGAGCGTGTCGACGACGTCGATATGTGTGCAAGTTCCCG
AGGGAAGTAGGCGAGGTGACTGTCTTGTATACAAGAACTAAACACACAAG
GCACGTGTTGTATCGCTGTGTGAGCGCATCACGAAGAAGGGCAGCGGGTG
CGCTAACAATTCGGCAGCATACGCAGCGAAAAGCAAGAACGTTGGCAATT
TACAGCAAGAGGCGGAGAGGTGGCGCCGCCCGTTGACCGAATTTCAAAGC
CCGATTGCCCTACAAA

Coding sequence (CDS) from alignment at chr_00:1541330..1548145-

>Ec-00_001290.1 ID=Ec-00_001290.1|Name=Ec-00_001290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1446bp|location=Sequence derived from alignment at chr_00:1541330..1548145- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTCAGGTACCCTCAAAATACTGTCTGGAGAACCCCCGAGCCACGTCG
CGAGAACAGGCTCTGGGCGGCGGCAACACATCCACACACCGGAGACCCTC
GTCTATCATCGACAACAGGAAGAAACAGAGAGCGAAACTTGTTGAGCACC
CGCCTGGAGAATCATCCGCCATTCTATCGGGGACGGTCAATCACGTGTAG
CGTCACGTCCCGAGGCGAAATCCCAACTAGGCGTCCAGCGGCGCCGAAAC
TTTTGTCCGCTACCCAACGATCCTGCGAGAGCCCGCGAGAGCGCGCCAAC
ATGGAGGTGGCGGCAGCGGCTAACCACTACGACGAGATGGAGGACGAGAT
CAAGACCAGGCAAATGGCCATCAGCAAGGCGCAAGCGTATCCTGCCTCAA
GCCTCGAGCGGCACGGTATGAAGCAGCCGGCGGGAGCGACCGCTGGCTCC
AAGCTAGCGGCATATCGTGCATCCACCACCGCGATGACTTCGCACAACAG
AACCACGAAACGCTTTCTGAGCCCCTCAGGGCCGAGCGCGCAGCACCCTT
CCAAGCTTCAGCGGCCTCAGCAGTATCGCTCGACGTCACCGACACGGGCA
GGCAGCAACGCCTCCTCGCCCATTGGTAGGGGTAGGGGTGACGCCAACGG
GAACGGAGAGAGGGCGGGTGGTGATGAATATGCCGGCACGGATTACAGCA
GGGACGAGACGATCGACAGGCTTACCAAGGTGCTCCGCACAAAGACTATG
GAGATTAAGCACCTGAAAGCCGACCTGAAGCGGTGTGAGGCAGTCGTGAG
AGACGTCGACGTGACCGTGGAAAATATCAGCAGCGATTCCGCCGAAACGG
ACATGAAGATCGTCCATCTCGCTGACGACCTCGCCATCGAGAAACGAAGC
CACCAGGAAGCGATCGAGAACATCGAGCGGCAGTCTCAGAGATTGACTGA
GCTGGAGAAAGTCTCTACTGAAAAACACGAGGAGAACATGTTGCTGTCGG
GACGACTTGAGGAGATTAACCACCTGGCCGGTCAGCAGGAGCAGCGGCTC
CAGGAAGCAAGGGTGGCGGCAGCGGAAGCAGCGGCAGCGGCGGCGGCGGC
TGAGGAGGCGGCAGCGGCGGCGGAGAAAAGGGTAGAGGCGGCGGAGGCGG
CATTGGCGGCGCAGGGAGGGGGCGGGCTAGAGAAGGAGCTCGAGAAGCTT
AGGCAGGCCGCGGAGATGAAGGCTAAGCAATTGGAAGCGGTCCAAGAGCG
GGCGAGCAAGACCAACATGGAGCTGCAGCGCTACAAGGGGCTAGCGCGCC
GCGGGCGTTTCAAGCGTTTGCTGGCGAAGCTCTGGTGGTTGCTCCGGGCC
ATCGGGTTCTTGGGCTTTCTCTTTTTCGCGTACGTTGCGGTGTCCGAAGG
CACCTTCCGATCTCGCGGTGTTGATGTCTACCGGTTGGCGCACTGA

Synonyms

The feature 'Ec-00_001290.1' has the following synonyms


Synonym
Esi0013_0076
Esi_0013_0076