Ec-00_000980.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_000980.1
Unique NameEc-00_000980.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length371
Homology
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: D8LE53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE53_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 5.950e-270
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 1 
Query:  226 MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLLDDP 1335
            MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLLDDP
Sbjct:    1 MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLLDDP 370
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A836CGC5_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC5_9STRA)

HSP 1 Score: 365 bits (936), Expect = 2.300e-115
Identity = 194/374 (51.87%), Postives = 253/374 (67.65%), Query Frame = 1 
Query:  226 MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWH-DKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGV-TDST----AYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLLD 1329
            M  S AA+    + S +PA  P+ QQ L S+SP+ TP    G YL + + F+ LG+ L+  + +  +  +QYDG+G+D  DC+ITT  E  +CTI+F + KD+P P YVYYEL NFY NH  YV S    QLLGS   SD+  C PL  NG L L PCGLIANTLFNDI TV+S Q MEET IAW++D+ DKF QP GFVTTAC   D C +CL  A  +D D    ++GCG+ TD++    AY+YPDED  QYLYETFP+VISPL+GVKNEHF+VWMRV+GL  FRK YG+I   L +G T++F+V NNF+V  + G+KS+++S+ +D G  N+YW QS   IG +VL LAL++ + Q   PR +GD+  L D
Sbjct:    1 MSNSGAAD--GDQKSRRPAASPFNQQQLASFSPIFTPRTITGIYLTVAVFFILLGSGLYAVNGNAQDYEFQYDGNGADSTDCEITTANEGKNCTISFTLTKDLPAPIYVYYELHNFYSNHRKYVQSFSQDQLLGS-QISDLSACTPLERNGDLTLSPCGLIANTLFNDIITVTSDQVMEETGIAWNTDL-DKFEQPHGFVTTACAATDECASCLQAAYNSDDD----YDGCGIATDASGTSYAYWYPDEDKIQYLYETFPDVISPLEGVKNEHFMVWMRVAGLRQFRKPYGKISQSLAKGTTVTFNVVNNFLVSSFGGSKSLVMSHVSDLGAPNVYWPQSFLVIGFLVLGLALVVILVQTCAPRPLGDVKMLFD 366
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK)

HSP 1 Score: 317 bits (813), Expect = 3.650e-97
Identity = 171/371 (46.09%), Postives = 233/371 (62.80%), Query Frame = 1 
Query:  262 ELSNKPANRP----YYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVV-ELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQT----MEETDIAWDSDVADKFVQPDGFVTTACEDEDGC--VACLTDAGLTDSDGGTTFEGCGV-TDST----AYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLL 1326
            + SN    RP    + QQ L++W P+LTP   V  + +IG++F+ +G       D V E + QYDGD SD   C IT+YK+  +C++TF+++KD+ GP Y+YY+LTNFYQNH  YV+S   +QL GST  +D D C PL  NG+  L+PCGL+AN+LFND+  + +       ++ET I WDSD A KF QPDGF      D+ GC  + C  +     SD    ++ C   TD+     AYYYP+ D  QYLYETFPEVI+P++GV NEHFIVWMR + L  FRKLYG ID  L EGD ++F V+ N++V  +DGTKSII++N + FGG+N   G      G V L LA+   IKQ + PR + + ++LL
Sbjct:    3 DKSNSQERRPEESAFKQQRLKAWKPVLTPKWVVSSFAVIGVLFIIIGIAAKVSSDAVTEYKIQYDGDSSDP--CTITSYKQGRECSLTFNIDKDMDGPVYLYYQLTNFYQNHRRYVSSRYDAQLQGSTLHADTDYCSPLTSNGSQDLNPCGLVANSLFNDVIALEASTNAAVALDETGITWDSDRATKFAQPDGFAYVTLGDDAGCTELPCTCETAFDSSD----YDDCEFYTDAENTTYAYYYPENDEIQYLYETFPEVINPIEGVTNEHFIVWMRTAALPKFRKLYGIIDTDLTEGDEITFKVTANYLVSSFDGTKSIILANASWFGGKNAVLGMVYIVAGVVSLSLAIAFGIKQKLQPRALANPAELL 367
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A6U4G101_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G101_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.130e-92
Identity = 182/396 (45.96%), Postives = 236/396 (59.60%), Query Frame = 1 
Query:  241 AAELIEP--ELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKD-VVELRYQYDGDGSDGDD--------CKITTYKENLD----------CTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTS--DIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQT-MEETDIAWDSDVADKFVQPDGFVT-----TACEDEDGCVACLTDAGLTDSD-----GGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLL 1326
            AA +  P  E S +P +  + QQ L++W P+LTP   +G +LL+G+IFVP+G VL    D VVE + QYDG G+D D         CKITT  ++L           C IT +V+K + G  YVYYEL NFYQNH  YV S   +QL G T TS  D+ DC PL+  G  +L PCGLIAN+LFND+ T+ + +  M E DIAW+SD   KF QPD FV      T    +  C   L+  G   SD     G TTFEG    +   Y+Y +ED   YLYE FPEVI+P++GV NEHFIVWMR +GL  FRKLYGRI+  ++EG  L+F ++  FIVD +DG K ++VS T  FGGRN + G +   +G + L LALL   K  + PR +GD   L+
Sbjct:   38 AATMSAPVEEASRRPEDTDFKQQRLKAWQPILTPAWVIGTFLLVGIIFVPVGVVLKGLSDEVVEYKCQYDGSGADEDSSDCTISPSCKITT--DDLTALSPGASPDPCNITINVDKKMEGDVYVYYELHNFYQNHRRYVKSREDAQLRGETFTSKNDLKDCLPLVEKGDTILSPCGLIANSLFNDVITLQNTEIDMAEDDIAWESDKDAKFDQPDDFVKERYTGTGTATDAACQTQLSSNGDVPSDQLSNVGSTTFEG----EQWCYFYNNEDDITYLYEVFPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEQDISEGTQLTFQITPRFIVDEFDGKKFLVVSTTTWFGGRNPFLGIAYIVVGAICLALALLFFAKHAISPRKLGDTRYLV 427
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A7R9U6E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E4_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.260e-86
Identity = 172/394 (43.65%), Postives = 237/394 (60.15%), Query Frame = 1 
Query:  235 SQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKD-VVELRYQYDGDGSDGDD-------CKITTYKENLD---------CTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGS--TSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQT-MEETDIAWDSDVADKFVQPDGFV------TTACEDEDGCVACLTDAGLTDSD----GGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLL 1326
            S AA   E E+S +P +  + QQ L++W P+LTP   +G +L++G+IFVP+G VL +  D VVE + QYDG+G+           CKI+T  E L+         C IT DV++ +    +VYYEL NFYQNH  YV S   +QL G   TS SD+ DC PL+  G  VL PCGLIAN+LFND+ T+++    M E DI+W SD   KF QPD F+      T+A +    C+  L ++ + DS     G T FEG    +   ++Y +ED   YLYE +PEVI+P++GV NEHFIVWMR +GL  FRKLYGRI++ + +G  L F +   FIV+ +DG K I+VS T  FGGRN + G +   +G + L L+L+  +K  V PR +GD   L+
Sbjct:    2 SAAAGTAE-EVSRRPDDTDFKQQRLKAWQPILTPRWVIGTFLVVGIIFVPVGVVLKNLSDEVVEFKCQYDGEGAGNSSSCTIEPSCKIST--EQLEALGDTAPDPCYITIDVDEKMEADVFVYYELHNFYQNHRRYVKSREDAQLRGEVFTSESDLQDCLPLVEKGDTVLSPCGLIANSLFNDVITLTNSDVEMREDDISWQSDRDAKFDQPDDFISERLRNTSASDKAQACIEQL-ESDVPDSQVSSIGFTVFEG----EDWCFFYRNEDQITYLYEIYPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEEDIPKGTQLRFQIVPRFIVEEFDGKKFIVVSTTTWFGGRNPFLGIAYIVVGSICLFLSLVFFVKHTVAPRKLGDTRYLV 387
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 3.110e-84
Identity = 154/362 (42.54%), Postives = 219/362 (60.50%), Query Frame = 1 
Query:  262 ELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGA-VLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPL----IYNGTLVLHPCGLIANTLFNDIFTVSS-GQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCG--VTDSTA----YYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGD 1311
            E S +P + P+ QQ + S+ P+L P   VG +  IG+ F+PLG   +   ++VVE + +YDGD  D + CKIT   +   C++  +V++ +  P YVYYEL N++QNH  YV S  S QLLG     D ++C+PL    +    L L+PCGLIAN++FNDI  +++ G TM E DI+W SD   +F QP GF    C     C  CL         GG+ +  CG    +ST     ++YPD++TTQ+LYET+P V+SP++GV NEHFIVWMR +GL  FRKLYGRID+ +     L+F+++ NF V  + G KS++VSN +  G RN Y G +  ++G + L + L   IK L  PR +GD
Sbjct:   26 EKSRRPKDTPFRQQRVTSFLPILQPLLVVGIFFAIGVAFIPLGKWFIEESEEVVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPD-ENCEPLERTTVDGEILDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSANTSCSDCL---------GGSKYSSCGDHTDESTGTEYKFWYPDDETTQFLYETYPGVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQVLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGD 377
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A835Z5R6_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R6_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.620e-83
Identity = 162/370 (43.78%), Postives = 225/370 (60.81%), Query Frame = 1 
Query:  256 EPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVV-ELRYQYDGDGSDGD---DCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQT----------MEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGV-TDST----AYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMG 1308
            E    N+P N  Y QQ +R+W  +L     +G ++L G++F+  GA ++       E + QYDG G+      DC I+T  E+  CT+T  V+  +  P YVYY+L NFYQ+H  YVAS+  SQL+GS    D   C PL  NG   L+PCGLIAN++FND+FTVS+             M ET IAW +D+ D+F QPDGFV  +C     C +CL  AG TD         CGV TD+     AYYYP++ TTQYL+ET+P+V+SPL+GV NEHF+VWMR + L +FRKLYG ID  +  G  + FD++ NF+V  ++G KSI+++++   GG N   G +   IGGV+L++ LL+  K L+ PR +G
Sbjct:    6 ESPHQNRPENSAYKQQRIRAWQLILRERWVIGAFMLFGVLFLGTGAGIFAASTTAKEYKVQYDGVGTSPAILADCGISTTNEDKTCTVTISVKDKMEAPVYVYYQLDNFYQSHRRYVASLSPSQLMGSNVQGD-SLCSPLKKNGDQWLNPCGLIANSMFNDVFTVSAAPAPFDATAPAAYMRETGIAWPNDI-DRFSQPDGFVKKSCGGTASCASCLG-AGYTD---------CGVATDADGKRWAYYYPNDATTQYLHETYPKVVSPLEGVTNEHFMVWMRTAALPTFRKLYGIIDSDIPGGWDVQFDINANFLVANFNGKKSIVLASSVGVGGFNGALGIAYLVIGGVLLLVGLLLLAKVLLKPRPLG 363
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A7S2D039_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D039_9STRA)

HSP 1 Score: 273 bits (697), Expect = 3.640e-80
Identity = 164/385 (42.60%), Postives = 221/385 (57.40%), Query Frame = 1 
Query:  250 LIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKD-VVELRYQYDGDGSDG--DDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGS--TSTSDIDDCDPLIYNGTLVLHPCGLIANTLFNDIFTVSS----GQTMEETDIAWDSDVADKFVQPDGFVT--TACEDEDGCVACL------TDAGL---------TDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIK-QLVWPRTMGDISKL 1323
            + E   S KPA+  + QQ L +W P+LTP   +G +L IG +F+ LG V+    D +VE   QYDG G++    DCK++      DC ITF   + +  P YVYY++ NFYQNH  YVAS    QLLG   T  SD++ C PL  N T +L PCG+IAN+LFND  T++     G  ++ T+IAW SD   KF QP GF +   +C +   C+         T  GL         +D D     +GC  T     YYP +D  QYLYETFPEV+SP+ GVK+EHFIVWMRV+ L +FRKLYGRI D + +G T++FDV   F V+ + G K +I++  +  GG+N +   +   +G   L  AL  AIK  +V PR +GD S L
Sbjct:    1 MAENGGSRKPADTAFRQQRLPAWQPILTPNAVIGFFLAIGTLFLILGIVIQQASDSIVEKIVQYDGSGTNSAQSDCKLSN---GGDCQITFTAPEKMEAPIYVYYQIDNFYQNHRKYVASYNEDQLLGEVYTDESDVESCSPLYKNDTSLLSPCGVIANSLFNDKITLAGSSVDGLKLKTTNIAWPSDKDKKFAQPSGFKSKSASCSEVSDCIGSYCTDEVCTSLGLKSNCKGYNCSDPDYYNCEKGCYAT-----YYPSDDEVQYLYETFPEVVSPMLGVKDEHFIVWMRVAALPTFRKLYGRIMDDIPKGGTVTFDVDAEFWVNKFKGKKYLIITTASFVGGKNSFLYIAYLVVGSFCLAAALAFAIKIAVVGPRKLGDTSLL 377
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A7S3H696_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H696_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.250e-78
Identity = 147/367 (40.05%), Postives = 220/367 (59.95%), Query Frame = 1 
Query:  250 LIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVV-ELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGST-STSDIDD-CDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQT------MEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKL 1323
            + +P  SN+P +  + QQ L++W P++TP + V  ++ IG+ F+P G  L +  + + E R  YDG  +    C I+   E   C++TF+ ++D  GP YVYYEL NFYQNH  YV+S  S QL G   S +D+   C+  I NG+ +++PCGLIAN+LF D+FT+ +  +      M+ ++IAW SD  +KF QP GF +          A     GL D      ++         ++YP+++T QYLYE++P  ISP+ GV ++HF VWMR + L  FRKLYG+ID    +GDTL+F V+ NF V+ +DG+KS+++SN  +FGG+N + G +   +G + L+ ALL  +KQ V PR   D S L
Sbjct:    1 MEQPVQSNRPPSDDFRQQKLKAWQPIMTPLKVVAIFVAIGVAFIPTGVSLMNSSNAIYEKRIMYDG-SNQAVSCSISDQNEGKVCSLTFNFDEDADGPIYVYYELENFYQNHRRYVSSRDSLQLAGEAISKADLQTTCESFINNGSQLINPCGLIANSLFTDVFTLDNAASNPSTVSMDSSEIAWASD-KEKFKQPQGFQSKVVTSTANTCA---QEGLPDDC--KYYQDPATGTQYYFHYPNDNTVQYLYESYPNHISPVVGVTDQHFKVWMRPAALPQFRKLYGKIDHNYKKGDTLTFTVTANFEVESFDGSKSLLISNLGEFGGKNPFLGVAYVVVGSISLMFALLFVVKQTVAPRAKADASLL 360
[Close]
BLAST of Ec-00_000980.1 vs. uniprot
Match: A0A6U1P719_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1P719_CYCTE)

HSP 1 Score: 262 bits (670), Expect = 2.320e-76
Identity = 149/370 (40.27%), Postives = 207/370 (55.95%), Query Frame = 1 
Query:  247 ELIEP--ELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWH-DKDVVELRYQYDGDGSDGDDCKI-TTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDD--CDPLIYNGTLVLHPCGLIANTLFNDIFTVSSGQ-------TMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTA--YYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGD 1311
            E++ P  + + +P +    QQ + +W P+L PW  +G +L I  IF+P+G  + H    V +L  QYD       DC I TT     +CTITF   KD+  P  V+YE+ NFYQNH  Y  S  + QL GS +   +    C+PL + G   ++PCGL+ANT FNDI  + SG        TM E  IAW SD+A KF QP+GF    C   + C A            G  +  C V +     Y+YP+++TTQYLYET+P++I+P++GV NEHFIVWMR + L  FRKLYG I+  +      SF++ NN+ V  +DG KS++VS TN FGG+N + G    ++G    V  +  A KQL+ PR   D
Sbjct:    6 EVVVPLSKQTRRPLDTALRQQRVEAWYPILDPWWVIGSFLAIAAIFIPVGLTMNHLSNSVAQLVQQYDAFDKPHKDCGINTTANAKTNCTITFTALKDMEPPILVHYEIENFYQNHRQYYRSRDNYQLYGSLTQDSLSAQLCEPLNFLGGKKINPCGLMANTFFNDIIELQSGLDDQGNDLTMIEKGIAWQSDIAYKFRQPNGFKAEICPQNESCCA------------GAEWS-CTVYNGQLHRYFYPEDNTTQYLYETYPDIINPVEGVTNEHFIVWMRAAALPKFRKLYGWINQRITARSNFSFNIVNNWEVTSFDGRKSLVVSTTNIFGGKNDWAGPFFVAVGVFCAVCGVFFAAKQLIRPRKTAD 362
The following BLAST results are available for this feature:
BLAST of Ec-00_000980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE53_ECTSI5.950e-270100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGC5_9STRA2.300e-11551.87CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9FRN7_HETAK3.650e-9746.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U4G101_9STRA2.130e-9245.96Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U6E4_9STRA2.260e-8643.65Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6H5JEE3_9PHAE3.110e-8442.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5R6_9STRA3.620e-8343.78CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2D039_9STRA3.640e-8042.60Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S3H696_9STRA1.250e-7840.05Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A6U1P719_CYCTE2.320e-7640.27Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1282250..1293255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score760.4
Seed ortholog evalue4e-217
Seed eggNOG ortholog2880.D8LE53
Preferred nameTMEM30B
Length2576
KEGG koko:K08817
Hectar predicted targeting categorysignal anchor
Gene idEc-00_000980.1
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006869,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0010008,GO:0010570,GO:0010720,GO:0010876,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015247,GO:0015605,GO:0015711,GO:0015748,GO:0015833,GO:0015893,GO:0015914,GO:0015917,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022857,GO:0023052,GO:0030141,GO:0030154,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031344,GO:0031346,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034204,GO:0034220,GO:0034613,GO:0035577,GO:0035579,GO:0036010,GO:0036230,GO:0040008,GO:0042119,GO:0042221,GO:0042493,GO:0042581,GO:0042582,GO:0042623,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043492,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045332,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0051960,GO:0051962,GO:0055085,GO:0060284,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070861,GO:0070863,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090087,GO:0090316,GO:0097035,GO:0097708,GO:0098588,GO:0098656,GO:0098657,GO:0098791,GO:0098805,GO:0098852,GO:0099503,GO:0120035,GO:1902494,GO:1903827,GO:1903829,GO:1904949,GO:1904951,GO:1990351,GO:1990530,GO:1990531,GO:2000026
EggNOG free text desc.aminophospholipid transmembrane transporter activity
EggNOG OGsCOG5035@1,KOG2952@2759
EC2.7.11.22
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000980Ec-00_000980Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1282250..1293255 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000980.1Ec-00_000980.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1283486..1292895 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000980.1.9Ec-00_000980.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1282250..1283548 -
Ec-00_000980.1.8Ec-00_000980.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1284051..1284243 -
Ec-00_000980.1.7Ec-00_000980.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1285391..1285482 -
Ec-00_000980.1.6Ec-00_000980.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1285859..1285973 -
Ec-00_000980.1.5Ec-00_000980.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1286512..1286588 -
Ec-00_000980.1.4Ec-00_000980.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1287053..1287263 -
Ec-00_000980.1.3Ec-00_000980.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1287859..1288017 -
Ec-00_000980.1.2Ec-00_000980.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1292693..1293060 -
Ec-00_000980.1.1Ec-00_000980.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1293194..1293255 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0009803UTR:Ec-00_000980.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1282250..1283485 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000980.1CDS:Ec-00_000980.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1283486..1283548 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0009805UTR:Ec-00_000980.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1292896..1293060 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_000980.1 ID=Ec-00_000980.1|Name=Ec-00_000980.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=371bp
MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLI
FVPLGAVLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEK
DIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNG
TLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVT
TACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLY
ETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFD
VSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIA
IKQLVWPRTMGDISKLLDDP*
back to top

spliced messenger RNA

>Ec-00_000980.1 ID=Ec-00_000980.1|Name=Ec-00_000980.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2576bp|location=Sequence derived from alignment at chr_00:1282250..1293255- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TGGACCGGGACCGAGCAATCCACACTGCAAACACGAGGGGACCAGGGGTC
ATCCATACAAGGGACACACACCCAAGCGAGCTACCGTAGAGGCAGTTAGC
GGGAAACGTGGCGACGACGGACGACGACTTACGGGAGGTCGGCGGCGGCT
CTCGTGGCTATAAGCCGCTGGCCGACTCTCCGGACGAAAGCAGCACCATT
AGGGCTAAGGTGTCACCCGAAATTGAGATGGATCGATCACAAGCCGCGGA
GCTCATCGAGCCTGAGCTCTCCAACAAGCCAGCAAACAGGCCGTATTACC
AGCAGACGTTGAGGTCCTGGTCTCCACTGCTGACGCCATGGAGGGCTGTG
GGAGGGTACCTGCTGATTGGGTTGATATTCGTGCCACTTGGTGCGGTACT
GTGGCATGACAAGGACGTTGTCGAACTCAGGTACCAGTACGACGGAGACG
GTTCGGACGGAGACGACTGCAAGATCACCACCTACAAGGAGAACTTGGAC
TGCACCATTACGTTTGACGTGGAGAAAGACATTCCGGGACCGGCATATGT
ATATTACGAGCTCACGAATTTCTACCAGAACCACGCCACGTATGTAGCTT
CGGTCGGCAGCAGTCAGTTGTTGGGCTCCACGTCCACCTCGGACATCGAC
GACTGCGACCCTCTTATCTACAATGGAACCCTGGTGCTGCACCCGTGCGG
GTTGATAGCCAACACCCTCTTCAATGACATCTTCACCGTCTCGTCTGGGC
AAACCATGGAGGAGACAGACATCGCCTGGGACTCGGACGTGGCAGATAAG
TTCGTCCAACCAGATGGTTTCGTGACGACCGCTTGCGAAGACGAAGATGG
GTGTGTAGCCTGTCTCACGGATGCAGGCCTCACCGACAGCGACGGGGGAA
CGACGTTCGAAGGCTGCGGCGTGACGGACTCGACAGCCTACTACTACCCC
GACGAGGACACTACCCAGTACCTTTACGAGACGTTCCCAGAGGTGATTAG
CCCTCTGGACGGCGTCAAAAACGAGCACTTCATCGTCTGGATGCGGGTAT
CGGGGCTTTCCTCATTTCGCAAGCTTTACGGCAGGATCGATGACGGTCTG
AATGAAGGGGATACTTTGTCCTTCGATGTGTCCAACAACTTCATCGTGGA
CTACTACGATGGCACCAAGTCCATCATCGTGTCCAACACGAACGACTTCG
GTGGCCGCAACTTGTATTGGGGGCAGTCGCTTCCCTCCATCGGGGGCGTG
GTTCTCGTATTGGCTCTTCTCATCGCGATCAAACAACTTGTCTGGCCACG
AACCATGGGGGACATCAGCAAACTCTTGGATGATCCATGATTGAAGAGAA
GTGGAACGCGTGTTGTAGGCTATTCTATTCCTTGCAAAGTTGTGTATTTC
GTGAAACTGCTGCAAGCATGATGCAAGTGGAATAACAGGGCTTGGCTCGT
AGACAGTGGTCGTGATGTACAGAAAGTGTCCCAACTGCAGGCACATTAAA
GTGTTTTTGCGGTGTTGATGGTAAGAGGCTACCGTCGAGAGGTCAAGCTT
TCAGTTGTTAAAAGGCGTTCGCCGTTGCCATCTTGCCTCTAAATAGTTTC
CTCTCATGTTTTTCGTCGCGCGCGCCCCGTCGTACCCAACAAGCGGAAAT
AATTGGACTACTGAACCAGTGAATAAAGGATTGCGCTTCTCACAGGGGGT
ATGCATATCCCGTGGTACTCTGTGTACTTCACACGTACTCGTGTTTACTG
CGTTTTTGGGCTGCTGGCGGAAGTCGCTCCTGTCTTTTCAGTTGTGTGTT
TACATAGTATGATGTGCTTCGCTTGTCTACTAGAAGCACGATGAGGGGGG
GTGGTACGGCGGTGTACGATAGATCATGTGCAACATTGTCTGGAGGGCAC
TGTTTGAGTGTAGCTAGCTCTTTTTTGTCATGATAGTTGGACCTGCCTTC
GCGTGGGGGCCAAATTGAGGGCCTGTGGCGCAACGATTAGCGTAGACCGC
GGTGTTTTTTCTCGTTCGTCTGGATGCCCGTGATAGGCGAGGTTCGCGAA
ATTTCCGCATGCGATTTTGATCAGCAAGCGTCCTTTTGGAGCATTTGCTC
TCCCTGCCTGGAATGCGATATTCGGTCACTCTTTGAGGGCACTGTTGCTA
CGCATTTGCAAAAGCGTACGCTGCGAACTTGCAATACATTTTGATTTGTT
ATCTTTTCATTCCTCGACGTAAATTGGCACCGTGATGTGTGGTTTTGGAG
GCAGCTACACCAGTGAACAGATCACCAGAAAAAACACATCCAGCAAGTAG
GAAAACTTATGAGCCGAAGGTGCACTACTGTAGGCCCTGCATAAGTCCCT
ACTTCACCGTCACGTCTTAAGGTATACGGTTGCTGTACTAACAATGACGT
TGGTTGTATTTCCATGTGAATGTACCACAGCAGTAAAATAGGCTCAGATC
CCATACATAGGTACAACAAAAAATAATTAAATTATTTCGAAGCGCGAATT
TTCAGCAAAAAAAACACGGTGATTTGGCGCACATACACAGCAGCAGTTGT
TTTGGTGCACGTACTACACCGTTTTG
back to top

protein sequence of Ec-00_000980.1

>Ec-00_000980.1 ID=Ec-00_000980.1|Name=Ec-00_000980.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=371bp
MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLI
FVPLGAVLWHDKDVVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEK
DIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPLIYNG
TLVLHPCGLIANTLFNDIFTVSSGQTMEETDIAWDSDVADKFVQPDGFVT
TACEDEDGCVACLTDAGLTDSDGGTTFEGCGVTDSTAYYYPDEDTTQYLY
ETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFD
VSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIA
IKQLVWPRTMGDISKLLDDP*
back to top

mRNA from alignment at chr_00:1282250..1293255-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_000980.1 ID=Ec-00_000980.1|Name=Ec-00_000980.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11006bp|location=Sequence derived from alignment at chr_00:1282250..1293255- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TGGACCGGGACCGAGCAATCCACACTGCAAACACGAGGGGACCAGGGGTC
ATCCATACAAGGGTAGGGCGGGATACTCTGGTGACAGGTTTCTCACTTTA
CGAACAGTGTTGCTCTGCTGTGTGTGTTGTTCAGCGAGCAGCGACTCACC
GAGTGCAATCAACAGGGAGATTCTGTTCTTTGCTCAACCGTGCAGGACAC
ACACCCAAGCGAGCTACCGTAGAGGCAGTTAGCGGGAAACGTGGCGACGA
CGGACGACGACTTACGGGAGGTCGGCGGCGGCTCTCGTGGCTATAAGCCG
CTGGCCGACTCTCCGGACGAAAGCAGCACCATTAGGGCTAAGGTGTCACC
CGAAATTGAGATGGATCGATCACAAGCCGCGGAGCTCATCGAGCCTGAGC
TCTCCAACAAGCCAGCAAACAGGCCGTATTACCAGCAGACGTTGAGGTCC
TGGTCTCCACTGCTGACGCCATGGAGGGCTGTGGGAGGGTACCTGCTGAT
TGGGTTGATATTCGTGCCACTTGGTGCGGTACTGTGGCATGACAAGGACG
TTGTCGAACTCAGGTGAGTTGGGGAGGTGAACCAATATCGAGTTGCGCCG
CATGCCGTGCAGGGTTCCAGTTGCCGGTGAATGCTCACTGCTGTAGATGC
TTCCAGCAGCCGTGTTCTTGGTATGTATATCCATCGTATCGAACATATGT
TCATGGTACGTATATGCATCATTGACACGTTATGCGGCCTCGACATGATA
CTTCAAAATTTCGCGGTCGTTGTTATTGTTCTTGGTATTTTGTGTCTGGC
GTACAACCGTTCCGCACTCTGCTGCTCAGTATTAGGAAAAATAAATACAC
ACAGAAAGACTACCCGTTCGAGATATACCCACATTCGAACGGGATGTGGT
GGAGTTGTACGAAGAAGTATGCATACTACTGCTGTAGATAGGGCGGGGTA
GTAAGCCGCGGGGTAGCCAACTAAATTCTTTGCAGTTGTCTATCTGGGGT
GCTTTTTGCGGTGACAAAGTGGCAGCCGATCACATTGGATTTTGAATCCA
AGTCATCAAAAACAACATCAGCCGAAACAACATCACCCAACCTCAACAAT
AGTAGTAGAGATGGATTCGTTGTGTCTTTAATGGGGAGGCAGAGTAGGGG
TTTTGACGCTGACTATTTTCTCATACTTGAATCCAACATAAGAAAGACAA
CAACCTTCCCGCCTGAGGATACTGGTTATTAGTACTTTTTAAAATATCAG
TAGAGGATACCATCAAGAGGCGTCGTGGGCACGTTCAGATTTGCTACTGG
AGCTGAAATATCGAAGATCGCGGCAGCCCCTCAAAACAGTCCGAAATCTG
CGCCGGAACCAAGCGGCATCCAACATTTGTCACAGCGGTGCTCACCGCCA
CGGACCGTAATCCCCTGAACGGAGGGTTGTCAGCAGTAGCTAGTGGCATC
AGCTACTTCTGTGAACCCGCAGTTCAGCAGATTGGGGTCAGTGGCGGCGA
GCACAAGCAGAAGACACTGGGTGTCGGTCAATTTTGCAGAGATTTGCGGA
GATTGTAGGCCACTGCAACGACGCTCGATATCACCATCACAGAAGCAGCT
TTGAGTGCGCCAACACGCGCCGCCCGCTGCTATAGGATGTCCTGCAGTGA
TATTAGTACTATTAACCAGGTTTGGCAACACAGAGCTTTTTGGAACGCCT
GACGTTTCGGCTTTTTTGGCTTGAAAATAGAGTGTGGCGCGGATTTTTAT
CTTGTTTTCAAAGGAGGTGTGTGAAGGTAGACAAGTGAAATGTATGTTTT
GAGAAGCCTACACTGCAGTTTTTCGCGATGCCTTCCGACTGGTCTTGTGT
GTCTCTTGTACGTTTTCTGCTGCTCTTGCGTTTGTTTTCAAAGTTTGTCA
ACATCAAGTTATAATTTTAAAAGCCCGGTTGCTCCACACCGCAAAGAGTG
GCGGTGCCGAAAATGGTGGTGTGGGTCGTCTCGTCCAGACGTTCCGACAA
CGTCTCGCAGGGTGTATTCATCCTCTTCGTCTTGGAATACTCGAGCTTTA
AAAGTCGGTACAGGGGCTGTGGTATCTTATGTCACCGACAGTAGACCTGT
GTGCATACGTCATACGTACCGATTTGGCCTTTCGGTGGTTTCTCTGCACA
GAATGATGCAGCAGCAATTGTAAAACTATTCCCCGCGAGCCGTGTGTATG
CCACGTCTTGTATGGCGGCTGACAGAGGCCACGGGGCCATAGGACCCACG
GAAGCTGAGGTGGCGAGAGTCGGCAGTGCATGCATGCTAGAAAAAAAACT
CGCCAAAAAAAAGACGCGCTTCTGCATGTGTGCAGCAAAATTTTCCCGTG
GAACAGCTTTGTTTCATGGTGACCCCTCCCCACACACGGAAGCAACAACA
ATAGCAAAGGTATCCGCCACGAGATGTGTCCTGCTCCGTCTTGTGTGGTG
ATTGATACAGGCCAGGAGGATGTAGGACGCTCAGAAATTGCGAGCTTGAT
AGTCTGAGACAGCCTGAAAAAAACACGCCGCGTCCGCTGGATCAGTTTGT
TTGTTTTTTCCCCAGGCTAAGGTTTACATGTACAGCAGCGATGATGACTT
TCCACACACCGAAGCAATAGCAAGACAATGGCATCCATTACTAGCTCTGT
GTATGGCTCCTTGCCCCCGCCAATGCTGTCTTGCCACTCCCGGCGGTGGT
GTTGCGTATTTCGCTGAGATCTTCCTCTGTTTCTCCACGTGTGAACCAAC
CACGCGTGTGTGTGTGGGAGATCTCCGATTTTTTGTTCCTGCATTTCCTG
GGCAACTCCCGGGGTTGGGGGTGAGTACCTCCTTTGTTTTTTTGGGTACA
AATGCCGGTGAAGGACGGCCATCTGCTGCCGGAGCACGACCAAACCGGTG
GAGTGCCCTATTTTATTCTTCCTCACAAGCCAGCAGATCGTCAATCGGTG
CTCTTTAGACCTCGTTCTGGCCCCAAAGGTGGGTCCTTTAGGCTTCCCGG
AAATCAAAGCTTTGGGCCTGTACCACGCGGCGGAACAACAGGCCGATATT
TAGAGCCTGTGTTTTCCCTCCTGGGACGGAGGGAAAAGAACGGGCGCGCT
TCGGGCTCCGCGGCTCATTAAAATATGATCACAGAAGGCGTCAGTGCGAG
TTGGACTACGCGTATGTAGCAGGACCGTGCCGTGTGTCCTGGACCGGTTG
TGGGTGCACCGATTGTCATTGGTTCTACAGCTACGAGAAAAAGTATTCTA
CGCATGTTGCTGCGCCGGTGCATATCTCCCTATGCGGCAAAGTGAAAGGT
TCTTCTTACAGCAGTACACTGCTGTGCTTTTTTTTCTTACGATGTTCATC
TCTTCCACAGGTCAGAGTCCGAGATGGATTAGCAATGAATTGTCATGAGC
TGCAGAGCGCGAAGCGTGACCTTTTTCCCCTTCACCCCAGGAGGGATAAA
AGGCTCTATATATTGGCCTGTTCCAACGCCATGCAAGGGCTCAAGTTTGA
CCGCCGCCTAATTTCCGGGGTACCGGATATGCCCTCCTTTTCGACCAGAG
CGAGGTCTATATAGCACCGATTGACGATCTGCTGGCTTCTGAGGAAAAAA
AATAGGGCACTCTTCGTCACACCGGTTTGGTCGTGCTCCGACAACAGATG
GCCGTGCTGCATAGGCACTTGTGCCAAAAATTCGTAGGACATACCTCACC
CCCGTCCCCAGGTGTTCAAGGCGGGATTGCGAAAGCGGAGATCTCAACCA
CGCGCGATTCAAACCAGGAGAAGAACAGAGGTAGAATACTGCTGAGTCTC
GCACATCCACAGAACCACACCCATCCGAAGTGGTTCAATCCCTTCCATCG
CCCAAATTGTCTTCACCAAGGGCACCTTGGTCGAACCCCGTAGCCACCCT
CCTTCCATGGGTGAAAGCACAGCAGAAACAGCAGACCTGTTGCCTACTCT
CTGGCTAAATAACAGAGAGAGTCTTGGCGGTTCTGTTTGCCGTTGGAAAA
ATCGATGGGTGAATGCATGGTATAGATTGAGGTCTTGCCTACAGCAGCCA
CAACAGCAGCGGAGAGCGAATATACGGCGGTTGGTGCTGTTGACGCAATC
ACCGCATGGGAGTCAGAACGATACAGGGATGACGTCTTTCGCTGGACAAC
AATAGGGCGGGGGATGAGGGAAGCAAACAAACGACGCCGCCTCCAGCAAG
CGAAACATGAGACAGACTGGGATTTTGACAAACGGTCCATGCGAGAGAAC
GAGCTGGCTCTGTTGGAACTGCTGTGCTCCGGAATTTTCCACCTGCTTTC
CACACCGCGCTGCCCGTAGGTTCTATCTCTTGTAGTGTTTTTTTCGTGTC
TGCCACCCGTGCTCATTTTTCTCCGGCGGCAGTGCTACTTCGTGCCGATC
GTTTGGGGTACTGCTGCTGTAGCATCGCGTGTGTCATCGTCACGGCGTGT
GTGTGTATTCCTCCGTCGTTGTTGTAGCATTTGACACCAGCGGGGAGCGC
GTTGACAGTCTTGAAGATCCGCTCAATATATTCAGGATACGTATGTATGA
AGTGCGGAGGAAGTCTCTGAAGTCTCCACATCACAGCATCGCAGACAATC
GCAGATACAGACTGCTGCCGGTATTGGGCCAACCCCACGGCTCATAACCC
CTCCCTATCTCGTAGCATTGCATGATGACCAACTTGTATTTATACAGTTC
CCCGAGCAGGATGTAGCGATATCTTCCCTGTGGGTAACAGACGCAACGGG
TAGTTCGGTGGCCGTCTTGTGTATCTGACTACCAGGTACCAGTATATGTT
AGGCAAGCAAGGTGTAGAGGAAGATGTTGGAAGATGTAGGGCGGGTATTT
TATTCGTTGTACCCTTGGTTGCATTTTCACAGCGAGTGCACATTGTGGTG
TGTGTAGTTCACCTGACTGTATTGACCTGGCGCCGATGGATGCTGATTGG
ATTTGCGGTGCATCTGTGCATCGAGAAATACGTGTGTTGTATGCATGCAT
GCAAGGTGAGCAGGGTTGGGCAAGGTAAACATCGTTCCCTCGCTGTGATT
GCGGCATTGCGGCATTGCGGCATCTCGTGTAACGCTGGTACTTCTCCTCA
CCAACCAAGTGGTGCTGCACATATGGAGCTGTATGATAGATTCATGTGTT
GACTCAAGTTTGCACCATCTGCAGTGCTTCACGATGTGTTGCATCTTTTT
TGCACATACAAAATCTTTGTGATGTCTGTCTGGCGTAGGTACCAGTACGA
CGGAGACGGTTCGGACGGAGACGACTGCAAGATCACCACCTACAAGGAGA
ACTTGGACTGCACCATTACGTTTGACGTGGAGAAAGACATTCCGGGACCG
GCATATGTATATTACGAGCTCACGAATTTCTACCAGAACCACGCCACGTG
AGTCTCAGTCGATTTTGATTGTGCACATCAAATGGCTCGCGTGCTCACGT
ATCCAGCTGTGAAGACAACAAGAGGCACGAGAAGGCGGAGTGAACTGCGT
GTGTCCATTACATTCGGGCAAGGGGGTTGAGGGCAGAAACATAAACACAA
AAACGTAAGTTCACGGCCACGACGGATCTGTCCATCGAGTAGTCCCTTTC
AAATATATGCCCTAGTAACAGCGTGATCTCACCCATTGCGTGCAGTTTTG
ACCCATACGGCATGATCGAGGTCAATCCGCGATCTTTCCACCTCCATCTA
TACATGCAGCAGTAGTTGGATGGCGTGTAAATGAGGTGCAATGTATGAAA
CCGATCATTGTGCTAGAGGACTGAGAGCGATACGGCCACTCGCTAGCTTT
TGTCCGCGTATCGTCCGAGAGCTCCAAAACCGCACGACTAGAACCAAGTC
TCGTGTTATTTGCTCGCGTACGTTCTCTACAAAGTGACTGTATGCGTACG
ACGTTTTGTCGTGTTTGTGTCTCGTCGTTTACGCGATAGATCTTTGGAAT
CGAATGTATGCTTACAGCTGTGTGCTTGAATCTTTCTGTTAGGTATGTAG
CTTCGGTCGGCAGCAGTCAGTTGTTGGGCTCCACGTCCACCTCGGACATC
GACGACTGCGACCCTCTTATCTACAATGGAACCCTGGTGCTGCACCCGTG
CGGGTTGATAGCCAACACCCTCTTCAATGACATCTTCACCGTCTCGTCTG
GGCAAACCATGGAGGAGACAGACATCGCCTGGGACTCGGACGTGGCAGAT
AAGGTGTGGGCGTACTCCTCTTGTGTGCACAGGCGATGCCAACGTCGTTG
AGTCATACTTGAATGTCGGCAAACGTTGGTTCTCGGAATGGGGCTGCTTT
GGTTGGATGGACCTATCGCCGCTCTTGGGTTGCCCGCGAACAATGGAGCA
AGCTGCATGTTTTGCTGCATTCCCTCGAGCTTGAGATGTAACCTGAATCA
GCTATGCATGCTACAAGATCGTTTCGTCTCGCCCCCAACCTTGGTCTGCG
GCACTGTAGTTGCTGTCAAGACCACAATGGTTCTAGAATCGTCCGAGTTG
GCAGACAAGAAGAAGAGAAGAAGTTCGTTTTCAATGCGAGTTTTGTGCGA
ACAGTCGATTGGTCGAGCTTGCGCCCTCGCGGCGAAACGATGCAACTAGT
GATTTGACATCACGTGACACGTTCTATACCACCCGATGTCCACCGCACGT
TGTCGATCCCCCTGCAGTTCGTCCAACCAGATGGTTTCGTGACGACCGCT
TGCGAAGACGAAGATGGGTGTGTAGCCTGTCTCACGGATGCAGGGTGAGA
ACTCAGCGTCAAACCACAGAGGAGTTCACCATGCGCCGCGGTAGCTTTTG
CTGGGCTGGGAGTGGATAGACCTGGGTAGGGCCATATGTTTCAGACGACG
CTGCCGCCTGGATTATGAGATGATTTTGTTGTGACGGGAATGGAGCTTTC
AACGCATTTTCACGTTTTATGGTATGCCGCCGCTGTTTCTCTGGGGATAC
TGTACACAAGAGGGTTTGTGAACGTAGGATGTGTGGTAGACGGTGGTGCA
GATGCGCTGAGACCCAACCACCCGTATGATACCCGCTCCAATGTCATGGC
GGGCCTTTAGATCTCACTTGTCGAATATCCTCTCCCATGGCCATACACTG
GTCGTTGTCAAGCAGTGCATTGCGTTGGTTTCCATGGTGTGTTTCCGACC
TTTCTGTGCGGTGCATGTGCGGTCCTTGTACACATACCCGCGTGACCGGT
ACCTCACTTGTCGGCCATGGCGTCGTTCCAATGTCGGTGGGCGTATGTTT
ATGTGGCGCTTGCGGCCTTTGTGTGCCACTAGCCTCACCGACAGCGACGG
GGGAACGACGTTCGAAGGCTGCGGCGTGACGGACTCGACAGCCTACTACT
ACCCCGACGAGGACACTACCCAGTACCTTTACGAGACGTTCCCAGAGGTG
ACTGAAAAAGACGCACATCACCATGCCGTAGACTTCTGCGTAAGTTCCAG
TAACGGCAGTGTTCTCCAGTTGCTCACGGCGCCGTCTCGACACAGGAATG
AAGCACGACTGGTTTGGCATGGGAGACAGTTACGGTTTTTGCGTTGCGAG
CAGACAATGGCGGCCATCTGTTGTCGGTGAAACAGGTGGTGTATCAGTCA
TGTTCGTTGCAACGTCTACCAACTTGGAAAGTAAGGGTCTCGAATGCCTT
TTCCCAGACTATATCATGGGGAATCGATTCGATCCCAGCGCTGTCGCTGG
TACTTTTGGCTCGAAAAGCCATGTTTTCTATGACTCGAAAGTGTGCTGTG
TCGATATTTGTTTCTGTTCGAAGGTGATTAGCCCTCTGGACGGCGTCAAA
AACGAGCACTTCATCGTCTGGATGCGGGTATCGGGGCTTTCCTCATTTCG
CAAGCTTTACGGCAGGTGAGTCTTGTTCGTTTATTCTGCACCCTCCCGAT
TTCTGATTTATGGGTTCATTCCTCCAGCCTTACCGTACCCCGAGAGGATG
GGACTGATTTGTGAGGGATATTGTGGGGTGTTGCGAGCCGTAATCTTCGT
CGATAGCTCCATCGTTTCCTAGATTCGAAAGGGATGGATGGCGCGAGTAG
GGTGGCGGGGCGTGAGAATTATTGTTTGGGGCATTTGCGCCGTTGGTCGT
GTTTAGAAATTACACAAATTCACCGAATTGTGTTTTATCGGTCCGCACTA
AATACACACCCCCTTTTCAGTTTTGTCCAGTGTACCGGGTCTAACATTCC
CAACAAATTCAGTATGTTGTCATTCTGTGAATGTAGAGCAAACACTTGTA
ATATTGTCGCTACATGCAGCAGTGCGATCCGTCATAGCTTCTGAAGCTAT
TAATAGATGATACCAATGTAGCAGCGTTGGTTACACTGCCACCATCCTTG
TCTTGCTGCGGGGTACTCTGCGGGAACATCCCAGGGGCTTGAAGAAGGGA
ATCAGAGGGATCACACTGCCTACCGTTTGTAGTTTGTGGTACCCAGACTT
CAGCAATATACTATTTTACTACCAACATGAAATCGACCCTGATTCCAAGG
AGATATAAAAGGTTTTGTTCAGCTACGGTGCTCTATATTGTAGATGATGC
CTCCCGCGTGAGCTTCGCCACAACGTACCAGCCATGCTATACTTTTTTTT
TAATGTCTTCTGAGGTGACCGGGCCGGTACTTCTGCCCACGGTCACCTTT
TTGTCTTTCTGTGGACACGCGTTGGAGGCCGACGGTCGTAGTGACTCATT
GGATTCTTGGCGCAATGGTAATGCACCATTTTCATTTTCCGCATGGCTTT
CTCCTGCCTGTTCCCTTATCTCTCTGTGCCTCCAAGCCTTACGTGTCGGT
CGGAAAATACCTATGCGCACTCCAAGCCTTACGTTTCGGTCGGAAAATAC
CTATGCGCACTTTGATCAACCCTCTGTGACATCCGCACGCCGAGAAGAAC
AACGTTCTTTAGTTTATAAGCACTATCTTAACATTCCATTGGAACGGTCT
CGTACGATCAACCTCTAAATAGTGGCGAAATAATTCATTTCCCGACGAAC
CGTTCGATCCAGGATCGATGACGGTCTGAATGAAGGGGATACTTTGTCCT
TCGATGTGTCCAACAACTTCATCGTGGACTACTACGATGGCACCAAGTCC
ATCATCGTGTCCAACACGAACGACTTCGGTGGCCGCAACTTGTATTGGGG
GCAGTCGCTTCCCTCCATCGGGGGCGTGGTTCTCGTATTGGCTCTTCTCA
TCGCGGTGAGTGCGCTGTTCCCGTCGGGGGCAGTCTTGACATGTTGTGGT
AGTCGGCGAAACGGCTTTGGCGGGCATGTTGTTCCCTGGTGGACCCGAAA
TTTCCGTAGTACATGGAGACACGTTGACTCAGTCAAGCACAATTTCGGCT
CTGGAGTGCCAATGCAGCTCATCCGAGCATACGCGGATGCGACGTGACAC
GTAGTGCGCCCGATGTCGTTTTTCGGCTCTGGCCACGACCTCGTAGTCCA
GTAGACGGATCCTACCTATGGCAACGTCCGTCGACGTTCACACGAGGTTC
AATGTATCATCTGTTCTCGCTGTCTTTTTGACGGACCGAGGTTTTTCAGC
GCAGGATGCAGTCAGTACCGGTAGTACGTGTATGTGTTTTCCTCACGAGT
GCCTAGGCCTTGTGATGATTCTGGTATGCGATTGTTTCAACTCCCTTGTG
TCTTCCTGCCTGCCTGCCTGCCTGCCTGCTGGTTTGGTACATCCTTCCGC
TGTCCAGATCAAACAACTTGTCTGGCCACGAACCATGGGGGACATCAGCA
AACTCTTGGATGATCCATGATTGAAGAGAAGTGGAACGCGTGTTGTAGGC
TATTCTATTCCTTGCAAAGTTGTGTATTTCGTGAAACTGCTGCAAGCATG
ATGCAAGTGGAATAACAGGGCTTGGCTCGTAGACAGTGGTCGTGATGTAC
AGAAAGTGTCCCAACTGCAGGCACATTAAAGTGTTTTTGCGGTGTTGATG
GTAAGAGGCTACCGTCGAGAGGTCAAGCTTTCAGTTGTTAAAAGGCGTTC
GCCGTTGCCATCTTGCCTCTAAATAGTTTCCTCTCATGTTTTTCGTCGCG
CGCGCCCCGTCGTACCCAACAAGCGGAAATAATTGGACTACTGAACCAGT
GAATAAAGGATTGCGCTTCTCACAGGGGGTATGCATATCCCGTGGTACTC
TGTGTACTTCACACGTACTCGTGTTTACTGCGTTTTTGGGCTGCTGGCGG
AAGTCGCTCCTGTCTTTTCAGTTGTGTGTTTACATAGTATGATGTGCTTC
GCTTGTCTACTAGAAGCACGATGAGGGGGGGTGGTACGGCGGTGTACGAT
AGATCATGTGCAACATTGTCTGGAGGGCACTGTTTGAGTGTAGCTAGCTC
TTTTTTGTCATGATAGTTGGACCTGCCTTCGCGTGGGGGCCAAATTGAGG
GCCTGTGGCGCAACGATTAGCGTAGACCGCGGTGTTTTTTCTCGTTCGTC
TGGATGCCCGTGATAGGCGAGGTTCGCGAAATTTCCGCATGCGATTTTGA
TCAGCAAGCGTCCTTTTGGAGCATTTGCTCTCCCTGCCTGGAATGCGATA
TTCGGTCACTCTTTGAGGGCACTGTTGCTACGCATTTGCAAAAGCGTACG
CTGCGAACTTGCAATACATTTTGATTTGTTATCTTTTCATTCCTCGACGT
AAATTGGCACCGTGATGTGTGGTTTTGGAGGCAGCTACACCAGTGAACAG
ATCACCAGAAAAAACACATCCAGCAAGTAGGAAAACTTATGAGCCGAAGG
TGCACTACTGTAGGCCCTGCATAAGTCCCTACTTCACCGTCACGTCTTAA
GGTATACGGTTGCTGTACTAACAATGACGTTGGTTGTATTTCCATGTGAA
TGTACCACAGCAGTAAAATAGGCTCAGATCCCATACATAGGTACAACAAA
AAATAATTAAATTATTTCGAAGCGCGAATTTTCAGCAAAAAAAACACGGT
GATTTGGCGCACATACACAGCAGCAGTTGTTTTGGTGCACGTACTACACC
GTTTTG
back to top

Coding sequence (CDS) from alignment at chr_00:1282250..1293255-

>Ec-00_000980.1 ID=Ec-00_000980.1|Name=Ec-00_000980.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1113bp|location=Sequence derived from alignment at chr_00:1282250..1293255- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATCGATCACAAGCCGCGGAGCTCATCGAGCCTGAGCTCTCCAACAA
GCCAGCAAACAGGCCGTATTACCAGCAGACGTTGAGGTCCTGGTCTCCAC
TGCTGACGCCATGGAGGGCTGTGGGAGGGTACCTGCTGATTGGGTTGATA
TTCGTGCCACTTGGTGCGGTACTGTGGCATGACAAGGACGTTGTCGAACT
CAGGTACCAGTACGACGGAGACGGTTCGGACGGAGACGACTGCAAGATCA
CCACCTACAAGGAGAACTTGGACTGCACCATTACGTTTGACGTGGAGAAA
GACATTCCGGGACCGGCATATGTATATTACGAGCTCACGAATTTCTACCA
GAACCACGCCACGTATGTAGCTTCGGTCGGCAGCAGTCAGTTGTTGGGCT
CCACGTCCACCTCGGACATCGACGACTGCGACCCTCTTATCTACAATGGA
ACCCTGGTGCTGCACCCGTGCGGGTTGATAGCCAACACCCTCTTCAATGA
CATCTTCACCGTCTCGTCTGGGCAAACCATGGAGGAGACAGACATCGCCT
GGGACTCGGACGTGGCAGATAAGTTCGTCCAACCAGATGGTTTCGTGACG
ACCGCTTGCGAAGACGAAGATGGGTGTGTAGCCTGTCTCACGGATGCAGG
CCTCACCGACAGCGACGGGGGAACGACGTTCGAAGGCTGCGGCGTGACGG
ACTCGACAGCCTACTACTACCCCGACGAGGACACTACCCAGTACCTTTAC
GAGACGTTCCCAGAGGTGATTAGCCCTCTGGACGGCGTCAAAAACGAGCA
CTTCATCGTCTGGATGCGGGTATCGGGGCTTTCCTCATTTCGCAAGCTTT
ACGGCAGGATCGATGACGGTCTGAATGAAGGGGATACTTTGTCCTTCGAT
GTGTCCAACAACTTCATCGTGGACTACTACGATGGCACCAAGTCCATCAT
CGTGTCCAACACGAACGACTTCGGTGGCCGCAACTTGTATTGGGGGCAGT
CGCTTCCCTCCATCGGGGGCGTGGTTCTCGTATTGGCTCTTCTCATCGCG
ATCAAACAACTTGTCTGGCCACGAACCATGGGGGACATCAGCAAACTCTT
GGATGATCCATGA
back to top
Synonyms
The feature 'Ec-00_000980.1' has the following synonyms
Synonym
Esi0013_0015
Esi_0013_0015