Ec-00_000870.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_000870.1 vs. uniprot
Match: D8LNS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI) HSP 1 Score: 256 bits (653), Expect = 5.660e-83 Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 1 Query: 1 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALT+S SMT E+CE C GS+Y QYGRE Sbjct: 140 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALTESSSMTTELCELTCAGSSYFSTQYGRE 269
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FJ36_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ36_ECTSI) HSP 1 Score: 237 bits (604), Expect = 7.520e-79 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 Query: 1 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALTDSFSMTME 333 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALTDSFSMTME Sbjct: 1 MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQDRIMELALTDSFSMTME 111
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI) HSP 1 Score: 185 bits (469), Expect = 1.300e-57 Identity = 88/121 (72.73%), Postives = 99/121 (81.82%), Query Frame = 1 Query: 31 MTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 MTTELCELTC GS YF+TQYGRECWCG AG DY HGEST+CTY C GN D+TCGGF AA+VY Y T E TPT S+VGC+QD+ D R+MELALTDS SMT E+CEAECTG+ Y G+QYG E Sbjct: 1 MTTELCELTCLGSTYFATQYGRECWCGSAGMDYALHGESTDCTYGCAGNADQTCGGFDAANVYRY-TNESTPTSSFVGCYQDESDARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSE 120
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 180 bits (456), Expect = 9.800e-52 Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 4 ELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 +LAL++ S MTTELCE TC G+ +F+TQYGRECWCG AG DY HGEST+CTY C G+ D+TCGGF AA+VY Y+ + T ++VGC+QD+ D RIMELALTDS SMT E+CEAECTGS Y G+QYGRE Sbjct: 343 DLALSDFS-MTTELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGSTYFGMQYGRE 471
BLAST of Ec-00_000870.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 172 bits (437), Expect = 2.970e-51 Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1 Query: 4 ELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 +L L++SS MTTELCELTC GS YF+TQYGRECWCG G DY HGESTECTY C G+ D+ CGGF AA+VY ++ T T S VGC+QD+ D RIME ALTD+ SMTME+CEAEC+G+ Y G+QYG E Sbjct: 110 DLVLSDSS-MTTELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTG--ETSTSSLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSGNTYFGMQYGTE 236
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.270e-51 Identity = 87/130 (66.92%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 4 ELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQ-DRIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 +LAL++ S MTTELCELTC GS YF+TQYGRECWCG A DY HGEST+CTY C G+ D+TCGGF AA+VY+Y T E T ++VGC+QD+ RIMELALTDS SM+ME+CEA+C G+ Y GLQYGRE Sbjct: 221 DLALSDYS-MTTELCELTCLGSTYFATQYGRECWCGSADMDYALHGESTDCTYACAGDADQTCGGFDAANVYSY-TDESTAISAFVGCYQDESGSRIMELALTDSSSMSMEMCEAKCRGNTYFGLQYGRE 348
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 182 bits (463), Expect = 3.630e-51 Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 1 Query: 4 ELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 +LAL++ S MTTELCE TC G+ YF+TQYGRECWCG AG +Y HGEST+CTY C G+ D+TCGGF AA+VY Y T E TPT S+VGC+QD+ D RIMELALTDS SMT E+CEAECTG+ + G+QYGRE Sbjct: 648 DLALSDYS-MTTELCEQTCLGNTYFATQYGRECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRY-TDESTPTSSFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGNTFFGMQYGRE 775
BLAST of Ec-00_000870.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 150 bits (378), Expect = 9.740e-41 Identity = 83/139 (59.71%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 7 LALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAY---STVEPTPT------FSYVGCFQDD-QDRIME-LALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 LAL++SS MTTELCELTC GS YF+TQY RECWCG A DY HGEST CTY C G+ +TCGGF AA+VY Y ST PTP+ +GC+ DD +DRIM+ L L+DS SMT E+CE C GS Y QYGRE Sbjct: 215 LALSDSS-MTTELCELTCVGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLVLSDS-SMTTELCELTCEGSTYFATQYGRE 351
BLAST of Ec-00_000870.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 152 bits (383), Expect = 4.550e-40 Identity = 80/141 (56.74%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 4 ELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAY---STVEPTPTFSY-------VGCFQDD-QDRIME-LALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 +LAL++++ MTTELCELTC G YF+TQYGRECWCG AG DY HGEST+CTY C G+ D+TCGGF AA+VY Y ST PTP+ + +GC++DD +DRIM+ LAL+D+ +MT E+CE C G+ Y QYG+E Sbjct: 542 DLALSDNA-MTTELCELTCNGQTYFATQYGRECWCGSAGADYTLHGESTDCTYACVGDADQTCGGFDAANVYLYAAESTPSPTPSPTADDAGPLALGCYEDDREDRIMDDLALSDN-AMTTELCEQTCLGNIYFATQYGQE 680
BLAST of Ec-00_000870.1 vs. uniprot
Match: A0A6H5JX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.120e-27 Identity = 61/109 (55.96%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 97 ECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAY---STVEPTPT------FSYVGCFQDD-QDRIM-ELALTDSFSMTMEICEAECTGSAYVGLQYGRE 390 ECWCG AG DY HGEST+CTY C G+ D+TCGGF AA+VY Y ST PTP+ F +GC++DD +DRIM EL L+D SMT E+CE C G+ Y QYG E Sbjct: 409 ECWCGSAGADYAVHGESTDCTYACSGDTDQTCGGFDAANVYRYPDGSTPNPTPSPTEAASFVALGCYEDDREDRIMDELVLSDP-SMTTELCELTCLGNTYFATQYGSE 516 The following BLAST results are available for this feature:
BLAST of Ec-00_000870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_000870.1 ID=Ec-00_000870.1|Name=Ec-00_000870.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=134bpback to top spliced messenger RNA >Ec-00_000870.1 ID=Ec-00_000870.1|Name=Ec-00_000870.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=402bp|location=Sequence derived from alignment at chr_00:1114545..1116590- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGGAGCTCGCGCTGACGGAGAGTTCTTCCATGACCACGGAGCTGTGCGAback to top protein sequence of Ec-00_000870.1 >Ec-00_000870.1 ID=Ec-00_000870.1|Name=Ec-00_000870.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=134bp MELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTback to top mRNA from alignment at chr_00:1114545..1116590- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_000870.1 ID=Ec-00_000870.1|Name=Ec-00_000870.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2046bp|location=Sequence derived from alignment at chr_00:1114545..1116590- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:1114545..1116590- >Ec-00_000870.1 ID=Ec-00_000870.1|Name=Ec-00_000870.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=402bp|location=Sequence derived from alignment at chr_00:1114545..1116590- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_000870.1' has the following synonyms
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