Ec-00_000370.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_000370.2
Unique Name	Ec-00_000370.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	270

Homology

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BLAST of Ec-00_000370.2 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 690 bits (1780), Expect = 2.720e-229
Identity = 399/612 (65.20%), Postives = 419/612 (68.46%), Query Frame = -3

Query: 2788 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKLVRPAETRWMVVMDGAHAPV*TLGAG*VAFLRVRCSQPQQDHIQELLAPIGVHAARPSGSCACYVHGKARGAVVRLGVQLDSWQGRVLFEGRRGRSAAVSWDAFGGGG*FLSPAAGQVGDYPQGPQDLLRSGPGTRSNNPI*SDGEWWRA*VLQFGTERGSAWSCXXXXXXXXVNGRGGLQYREFSRFFLSHQLAFVVTPSTFLRTLLLLLPPSACRATTSHCL*RLVLVASTGATASAFCLVTLMFLPLELVANAVAVVLQAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAAELESE 4623
            MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIK VRPAETRWMVVMDGA              L  R  Q +    +     +     R     + Y+    R  +VR+ V   +  G +LF+       A +W   G GG FL      VG      + L    PG R                                           ++  +FSR  L         P T+   +L                                          E V   ++  + AKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAAELESE
Sbjct:    1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAK------------LLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYM---LRDPLVRVHVMFTARLGELLFDW------AYNWIR-GKGGFFLKGEG--VG------RQLF---PGMRL------------------------------------------VEVADFSRLLLVKLETIRKDPKTYFAAVL------------------------------------------ERVQTTLSEAM-AKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAAELESE 494

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BLAST of Ec-00_000370.2 vs. uniprot
Match: D7FHK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK1_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 2.470e-170
Identity = 389/641 (60.69%), Postives = 405/641 (63.18%), Query Frame = 2

Query:  374 MSENGPSSGSAAPXXXXXXXXTKKKKRRSAFGSSRRAARNLRKSGDKFEDRTGKSVAEASAANNTRRAIERGSLNVVERVLEETKEELVKSKKIAVESQASCNMAMEFAREKDDELKRERARRQQAEQEKHXATXXXEAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKKVRACVXXXXXVFFAVVFFP*IFTSRSMFFYIDVNFIERLVLPAAGCCEST*TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSLK*RSSCFSLPCTTPRGCDSNKISTSRVPATRSRFLLSALRS*MGMSWSKRFSRRRFC*LPVTSLSATGTRSSPSSSLFTTWRRTRRGLDWCAYVA*KTRQQKHRLSFFTRRSSTRSGTQNTRCSTC*VTTPRLFPLRGRVV*SCCRESYGERIPPKNPQKELQEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVRAEAFHWC 2296
            MSENGPSSGSAAP XXXXXXXTKKKKRRSAFGSSRRAARNLRKSGDKFEDRTGKSVAEASAANNTRRAIERGSLNVVERVLEETKEELVKSKKIAVESQASCNMAMEFAREKDDELKRERARRQQAEQEKHXATXXXEAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKK                                                   TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSL               G    +           + L   +    G    K   +  F  +        G +  P   +F  +        W   V               R  S +  T  T+         +LF            E+  + +     Q+E  +  A                                                    XXXXXXXXXXXX RRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVRAEAFHWC
Sbjct:    1 MSENGPSSGSAAPAXXXXXXXTKKKKRRSAFGSSRRAARNLRKSGDKFEDRTGKSVAEASAANNTRRAIERGSLNVVERVLEETKEELVKSKKIAVESQASCNMAMEFAREKDDELKRERARRQQAEQEKHXATXXXEAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKK---------------------------------------------------TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSLNMTQQLLQSTMYHTTGVRLKQDLNITCARNTVKVLALGITQLDGNELVKAILKAPFLLIAGDESLRNGDKKFP---IFVAFYDVEADAPWFGLV---------------RVCSMKDKTAETQA--------QLF-----------YETIVDTLGYPKHQRERTKGNA----------------------------------------------NGVQGGXXXXXXXXXXXXHRRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVRAEAFHWC 507

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 514 bits (1323), Expect = 4.030e-163
Identity = 300/574 (52.26%), Postives = 347/574 (60.45%), Query Frame = -3

Query: 2908 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKLVRPAETRWMVVMDGAHAPV*TLGAG*VAFLRVRCSQPQQDHIQELLAPIGVHAARPSGSCACYVHGKA--RGAVVRLGVQLDSWQGRVLFEGRRGRSAAVSWDAFGGGG*FLSPAAGQVGDYPQGPQDLLRSGPGTRSNNPI*SDGEWWRA*VLQFGTERGSAWSCXXXXXXXXVNGRGGLQYREFSRFFLSHQLAFVVTPSTFLRTLLLLLPPSACRATTSHCL*RLVLVASTGATASAFCLVTLMFLPLELVANAVAVVLQAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKP 4623
            MTS  FMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSE SNA+FQRWKRVV  QFP+AKPWLIK +RPAETRWMVVMDGA               ++ C + +Q  ++ L           +     +V      R  +VR+ V   +  G +LF+       A +W   G GG FL      VG          R  P  R                                           ++  +FS   L         P T++  LL                                          + V   ++  ++ + F       + F AEFK+RWIK M+RHQ+LPLSMARIGCPSF+ARTGIMG GAVEQAVGPEFARAF HVAW  LYEGEPRTERER+YRTQL KDLGGTT+ARRKDELT GLFS ID D SVR+ELEQYANSGWGDKE+D+ APKGTSALARLFD PLLY+LVCHRFYFVPIHQQLIEAFFSK+DSCA+KTDMAEMD+VRVGGWKSAESRDIVC DA  ++IR AGKKVL++A EAKA+SHARKP
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGA---------------KLLCERWEQ--VEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDW------AYNW-IHGKGGFFLKGEG--VG---------RRLFPAMRL------------------------------------------VEAADFSCLLLQKLETIRKDPQTYVAALL------------------------------------------DRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEIDESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISHARKP 455

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 8.830e-124
Identity = 286/665 (43.01%), Postives = 344/665 (51.73%), Query Frame = -3

Query: 2788 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKLVRPAETRWMVVMDGAHAPV*TLGAG*VAFLRVRCSQPQQDHIQELLAPIGVHAARPSGSCACYVHGKA--RGAVVRLGVQLDSWQGRVLFEGRRGRSAAVSWDAFGGGG*FLSPAAGQVG-----DYPQGPQDLLRSGPGTRSNNPI*SDGEWWRA*VLQFGTERGSAWSCXXXXXXXXVNGRGG------------------LQYREFSRFFLSHQLAFVVTPSTFLRTLLLLLPPSAC-----------------RATTSHCL*-----RLVLVASTGATASAFCLVTLMFLPLELVANA-----VAVVLQAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAAEL-ESE 4623
            MTS  FMGPLGKGSWHEWERDH+FSLLGMVWYNTSRSESSNANFQRWKR+V  QFP+AKPWLIK +RPAETRWMVVMDGA               ++ C + +Q  ++ L           +     +V      R  +VR+ V   +  G +LF+     S    W+       F   AAG +      +Y      +LR        +P+      + A + +   +    W          ++G+GG                  ++  +FSR  L         P T+      L  P                    R TT HC       R +         + F    L+   LE +         A++ +AKLFM NFSED  FFAE K+RWIKWM+RHQ+LPLSMARIGCPSF++RTG MG G                                                   KDELTFG FS +D D SVR+E EQYANSGWGDKE+D+ APKGTSALARLFDFPLLY+LVCHRFYFVP  QQLIEAFFSK                           DIVCADATG++IR AGKKVL++A EAK +SHARK AENLSRKRVLEPEAA+DLL  LEKEG+RRPRVTAAE  ESE
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGA---------------KLLCERWEQ--VEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEW--LFCEYAAGNLNKTTYRNYWVQSACMLR--------DPLVRVHVMFTARLGELLFDWAYNW----------IHGKGGFFLKGEGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLAHPGNTFHXXXXXXXXXXXVPHNRTTTWHCYKYIYHGRRLFPGMRSVEVADFS--RLLLQELETIRKDPQTYFAALLDRAKLFMLNFSEDSFFFAEVKKRWIKWMQRHQELPLSMARIGCPSFYSRTGTMGGGL--------------------------------------------------KDELTFGEFSGVDGDLSVRSEPEQYANSGWGDKEIDESAPKGTSALARLFDFPLLYQLVCHRFYFVPNPQQLIEAFFSK---------------------------DIVCADATGDRIRGAGKKVLKEATEAKPISHARKLAENLSRKRVLEPEAAEDLLDVLEKEGSRRPRVTAAEFSESE 549

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.820e-118
Identity = 201/264 (76.14%), Postives = 218/264 (82.58%), Query Frame = -3

Query: 2851 KLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLL 3642
            K FM  FSED+ FFAEFK+RWIKWM+RHQ+LPLSMARIGCPSF+ARTGIMG GAVEQAVGPEFARAFLHVAW  LYEGEPRTEREREYRTQLVKDLGGTT+ARRKDELTFGLFS ID D SVR+ELEQYANSGWG+KE+D+ APK TS LARL DFPLLY+LVCHRFYFVPIHQQLIEAFFSK                           +IVCADATG++I  AG KVL +A EAKA+SHARKPAENLSRKRVLEPEAA+DLL
Sbjct:  136 KFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRTEREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEIDESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSK---------------------------NIVCADATGDQISGAGNKVLTEATEAKAISHARKPAENLSRKRVLEPEAAEDLL 372

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 2.370e-115
Identity = 202/265 (76.23%), Postives = 212/265 (80.00%), Query Frame = -3

Query: 2848 KLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKRVLEPEAADDLLV 3642
            KLF TN SEDKGFFA FK+RWIKWMERHQQLPLSMARIGCPSF+ARTGIM EGAVEQAVGP+FARAFLHVAW  LY+GEPRTERERE+RTQLVK  G  T+ARRKDELTFGLFS IDSD SVRNELEQYANSGW DKEVDQGAPKGTSALA LFD+PLLYKLVCHRFYFVPIHQQ                                   DIVCADATGE IRAAG KVLEKA+EAKAVSHAR+PAE  SRKRVLEPEAA+DLLV
Sbjct:  124 KLFTTNCSEDKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRTEREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEVDQGAPKGTSALACLFDYPLLYKLVCHRFYFVPIHQQ-----------------------------------DIVCADATGENIRAAGIKVLEKAKEAKAVSHARQPAEPWSRKRVLEPEAAEDLLV 353

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 5.860e-113
Identity = 228/564 (40.43%), Postives = 258/564 (45.74%), Query Frame = -3

Query: 3025 EPPIIHAHRL------GCVLHVLHISITAGMTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKLVRPAETRWMVVMDGAHAPV*TLGAG*VAFLRVRCSQPQQDHIQELLAPIGVHAARPSGSCACYVHGKARGAVVRLGVQLDSWQGRVLFEGRRGRSAAVSWDAFGGGG*FLSPAAGQVGDYPQGPQDLLRSGPGTRSNNPI*SDGEWWRA*VLQFGTERGSAWSCXXXXXXXXVNGRGGLQYREFSRFFLSHQLAFVVTPSTFLRTLLLLLPPSACRATTSHCL*RLVLVASTGATASAFCLVTLMFLPLELVANAVAVVLQAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFD-FPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKS 4695
            E PII+AHRL      G VLH+LHISITAG TSV+FMGPLGKGSWHEW   HVFSLLGMVWYNTSRS SSN NF RW+++V  +FP AKPW  K +RPAETRWMV                                                                                                                                                                                                                                                          + K FM NFSED  FFAEF  RW KWM+RHQ+LPLSMARIGCPSF+AR GIMG+GAVEQAVGPE+ARAFLHV W   YEGEPR+EREREYR QL +D GG  DARRKDELTFGLFS ++ D  +R E+E YA SG+GDKEVD+ A KGT+AL RLF+ FP LYK VC RFYFVPIHQQLIEAFFSK+D+CA+KTD+A MD VRVG W++
Sbjct:   53 EAPIIYAHRLRLRXRLGYVLHILHISITAGFTSVFFMGPLGKGSWHEWGTSHVFSLLGMVWYNTSRSNSSNTNFLRWQKLVADEFPAAKPWTKKFIRPAETRWMVA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKHFMVNFSEDSFFFAEFNMRWKKWMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEPRSEREREYRVQLGEDFGGVIDARRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEVDEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSWQT 367

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BLAST of Ec-00_000370.2 vs. uniprot
Match: D7FJJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ7_ECTSI)

HSP 1 Score: 370 bits (951), Expect = 1.340e-111
Identity = 285/538 (52.97%), Postives = 301/538 (55.95%), Query Frame = 2

Query:  683 MAMEFAREKDDELKRERARRQQAEQEKHXATXXXEAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKKVRACVXXXXXVFFAVVFFP*IFTSRSMFFYIDVNFIERLVLPAAGCCEST*TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSLK*RSSCFSLPCTTPRGCDSNKISTSRVPATRSRFLLSALRS*MGMSWSKRFSRRRFC*LPVTSLSATGTRSSPSSSLFTTWRRTRRGLDWCAYVA*KTRQQKHRLSFFTRRSSTRSGTQNTRCSTC*VTTPRLFPLRGRVV*SCCRESYGERIPPKNPQKELQEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVRAEAFHWC 2296
            MAMEFAREKDDELKRERARRQQAEQEKHXATXXX AAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKK                                                   TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSL               G    +           + L   +    G    K   +  F  +        G +  P   +F  +        W   V               R  S +  T  T+         +LF            E+  + +     Q+E  +  A                                                    XXXXXXXXXXXX RRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVR EAFHWC
Sbjct:    1 MAMEFAREKDDELKRERARRQQAEQEKHXATXXXXAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKK---------------------------------------------------TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQGGVSLNMTQQLLQSTMYHTTGVRLKQDLNITCARNTVKVLALGITQLDGNELVKAILKAPFLLIAGDESLRNGDKKFP---IFVAFYDVEADAPWFGLV---------------RVCSMKDKTAETQA--------QLF-----------YETIVDTLGYPKHQRERTKGNA----------------------------------------------NGVQGGXXXXXXXXXXXXHRRLLLHLPGRVVATGRRHGKSRRQMGGAARRKRAGVRVEAFHWC 404

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5JYL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL8_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 4.510e-107
Identity = 247/433 (57.04%), Postives = 268/433 (61.89%), Query Frame = 2

Query:  464 FGSSRRAARNLRKSGDKFEDRTGKSVAEASAANNTRRAIERGSLNVVERVLEETKEELVKSKKIAVESQASCNMAMEFAREKDDELKRERARRQQAEQEKHXATXXXEAAAASRRQAEERVRDMSKELAGLKDSVKSLRKTNATLLEDAGIPIVADDPPPEEDSTRSLEDELLLEKVKAERLQRKVDYLTPIVAGLKRQVSNEKKKVRACVXXXXXVFFAVVFFP*IFTSRSMFFYIDVNFIERLVLPAAGCCEST*TKRAKLNLGNLKADEPVGGAEQEEPEQEREKGGGELLSAEDEKKVLERVIKNRLKPGGKFGETAARLFQSFVQ---GGVSLK*RSSCFSLPCTTPRGCDSNKISTSRVPATRSRFLLSALRS*MGMSWSKRFSRRRFC*LPVTSLSATGTRSSPSSSLFTTWRRTRRGLDWCAYVA 1753
            FGS RRAAR L ++   FE+RTG+ +  ASA +NTRRAIERGSL VV R LEETKEELVKS KI  ESQ+SC+MAMEFAREKD+ELK ERARRQQAEQ+   AT   EAAAA RRQAE RVR MS+ELA LKDSVKSLRKTNATLLEDAGIPIVADDP PEEDSTRSLEDELLLEK KAERLQRKVDYL PIV GLKRQVS EKKK                                                   TKRAKLNL + KA EP GGAEQEEPEQE+ KGGGELLSAEDEKKVLERVIKNRLKPGG    +       F+     GV LK       L  T    C  N +    +  T+            G    K   +  F  +        G +  PSSS FTTWRRTR  LD CAYVA
Sbjct:    5 FGSRRRAARKLNQNKTNFEERTGQCMVAASAEDNTRRAIERGSLTVVPRTLEETKEELVKSNKIVEESQSSCSMAMEFAREKDEELKWERARRQQAEQKNKEATREKEAAAAGRRQAEARVRAMSRELASLKDSVKSLRKTNATLLEDAGIPIVADDPHPEEDSTRSLEDELLLEKGKAERLQRKVDYLAPIVDGLKRQVSYEKKK---------------------------------------------------TKRAKLNLEDRKAHEPEGGAEQEEPEQEKGKGGGELLSAEDEKKVLERVIKNRLKPGGGVSLSMTPQLLQFIMFHTTGVRLK-----QDLNIT----CARNTVKVLGLGITQLD----------GEELVKAILQAPFLLIADDESLRNGDKKFPSSSPFTTWRRTRLSLDCCAYVA 367

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BLAST of Ec-00_000370.2 vs. uniprot
Match: A0A6H5JNK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK4_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 2.530e-82
Identity = 150/171 (87.72%), Postives = 159/171 (92.98%), Query Frame = 1

Query: 1471 MTQQLLQ--STMYHTTGVRLKQDLNITCARNTVKVLALGITQLDGNELVKAILKAPFLLIAGDESLRNGDKKFPIFVAFYDVEADAPWFGLVRVCSMKDKTAETQAQLFYETIVDTLGYPKHQVLYVLSDNTASVSSEGKGCVKLLQRKLRGEDTTKKSTKRATGGTSSGS 1977
            MT QLLQ  ST++H TGV+LKQDLNITCARNTVKVLALGITQLDG ELVKA+L+APFLLIA DESLRN DKKFP+FVAF+DVEADAPWFGL+RVCSMKDKTAETQAQLFYETIVDTLGYPKHQVL+VLSDNTASVSSEGKGCVKLLQRKLRGEDTTKK   RATGG SS S
Sbjct:  221 MTPQLLQPTSTVFHATGVQLKQDLNITCARNTVKVLALGITQLDGEELVKAVLRAPFLLIADDESLRNEDKKFPVFVAFHDVEADAPWFGLLRVCSMKDKTAETQAQLFYETIVDTLGYPKHQVLFVLSDNTASVSSEGKGCVKLLQRKLRGEDTTKKPPTRATGGASSNS 391

The following BLAST results are available for this feature:

BLAST of Ec-00_000370.2 vs. uniprot

BLAST of Ec-00_000370.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIQ1_ECTSI	2.720e-229	65.20	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D7FHK1_ECTSI	2.470e-170	60.69	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5JI13_9PHAE	4.030e-163	52.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KH75_9PHAE	8.830e-124	43.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMW8_9PHAE	1.820e-118	76.14	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JQF6_9PHAE	2.370e-115	76.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KR45_9PHAE	5.860e-113	40.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJJ7_ECTSI	1.340e-111	52.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JYL8_9PHAE	4.510e-107	57.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNK4_9PHAE	2.530e-82	87.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:538927..544410 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	5291
Hectar predicted targeting category	other localisation
Gene id	Ec-00_000370.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370	Ec-00_000370	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 538927..544410 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370.2.2	Ec-00_000370.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 538927..542982 -
Ec-00_000370.2.1	Ec-00_000370.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 543176..544410 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370	3UTR:Ec-00_000370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 538927..541935 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370.2	CDS:Ec-00_000370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 541936..542745 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370	5UTR:Ec-00_000370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 542746..542982 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000370.2	Ec-00_000370.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 541936..542745 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:538927..544410-
coding sequence from alignment at chr_00:538927..544410-

mRNA sequence

>Ec-00_000370.2 ID=Ec-00_000370.2|Name=Ec-00_000370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=270bp
MTQQLLQSTMYHTTGVRLKQDLNITCARNTVKVLALGITQLDGNELVKAI
LKAPFLLIAGDESLRNGDKKFPIFVAFYDVEADAPWFGLVRVCSMKDKTA
ETQAQLFYETIVDTLGYPKHQVLYVLSDNTASVSSEGKGCVKLLQRKLRG
EDTTKKSTKRATGGTSSGSSSSGRGVQQRNAPAAAAERAGAGGGRAKRKQ
TAAAEGADKRQRKRGAGGGKGKGKGKGKTEAPPTPPAPTRTSGRNRTQTW
KIQEADGGGSSAEESGCES*

spliced messenger RNA

>Ec-00_000370.2 ID=Ec-00_000370.2|Name=Ec-00_000370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5291bp|location=Sequence derived from alignment at chr_00:538927..544410- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GGGCACACGGATTGGGTTCTTTTTCGGTTCTTTTGAATGCCCGCCTATTA
TACTGATTAAACAGTACATTACTCAGTTTCTTTGTGCAGTTAGACCTGCG
CCCAGGCCAAAGCGTGGCTCTTCATACGTTACACAGACCTGGACACAAGT
CCAATTGAGGTGACTGCGAGCTCGGTTTTCTCTTGAAGTTAAAGGGCGGA
CGAACAACCCCCAAAAACTAGGTTTTTCCCGGTTTTTTCAGCTGTTCTAC
TCACGTCCAAGGCGACCTTTGCTCCTATCGAAAAAGCGAGCTCGCAGTGC
TCTACGCTGGGTTTACAGCCTAACCCACACAACAAACCGAATACGAATCG
CATCAGCCACCCCCGATATCTAGATGTCCGAAAATGGCCCCTCCAGCGGC
TCTGCAGCGCCTGCTGCAGCCCCCGCACGTGACCCTACCAAAAAAAAAAA
ACGGAGGTCCGCTTTCGGCAGCAGCAGGCGCGCTGCACGAAATCTGAGGA
AAAGTGGAGATAAGTTTGAAGATAGGACGGGGAAGTCTGTAGCCGAGGCG
TCAGCAGCAAATAACACGCGGCGCGCTATCGAACGTGGCAGCCTCAACGT
CGTGGAGAGAGTGCTGGAGGAAACGAAGGAGGAGTTGGTCAAGAGTAAGA
AAATTGCGGTAGAGAGCCAGGCTAGCTGCAACATGGCGATGGAGTTTGCG
CGCGAGAAAGACGATGAGCTCAAGCGCGAGCGGGCACGGAGACAGCAGGC
GGAGCAAGAGAAACATGAGGCTACGCGAGAGCAGGAGGCGGCGGCCGCGA
GTCGGCGGCAGGCGGAAGAGAGAGTCCGCGACATGTCGAAGGAGCTGGCC
GGTCTGAAAGACTCGGTGAAATCGCTCCGCAAGACCAACGCCACCCTCTT
GGAGGATGCAGGGATACCAATCGTCGCCGACGATCCGCCCCCGGAGGAGG
ACAGCACCCGCAGCCTCGAGGATGAACTCTTGCTCGAGAAGGTGAAGGCC
GAAAGACTGCAGCGGAAGGTCGATTACCTCACGCCGATCGTGGCCGGACT
CAAGCGACAAGTTTCCAACGAGAAAAAAAAGGTGCGTGCGTGCGTGCGTG
CGTGCGTGCGTGTGTTTTTTGCAGTTGTTTTTTTCCCGTAAATTTTTACG
AGTAGAAGTATGTTTTTTTATATAGATGTCAACTTTATAGAACGTTTAGT
ACTACCTGCTGCTGGCTGCTGTGAGTCTACATGAGACGAAGCGAGCCAAG
CTTAATCTTGGGAACCTCAAGGCTGACGAACCGGTGGGGGGGGCGGAGCA
AGAGGAACCTGAGCAGGAGAGGGAAAAGGGTGGTGGGGAGTTGCTCTCTG
CAGAGGATGAGAAGAAGGTGTTGGAGCGCGTCATCAAGAACCGTCTCAAA
CCCGGCGGAAAATTTGGTGAGACTGCTGCCAGGCTATTTCAGTCGTTTGT
GCAAGGGGGCGTCTCTCTCAACATGACGCAGCAGCTGCTTCAGTCTACCA
TGTACCACACCACGGGGGTGCGACTCAAACAAGATCTCAACATCACGTGT
GCCCGCAACACGGTCAAGGTTCTTGCTCTCGGCATTACGCAGCTAGATGG
GAATGAGTTGGTCAAAGCGATTCTCAAGGCGCCGTTTTTGCTGATTGCCG
GTGACGAGTCTCTCCGCAACGGGGACAAGAAGTTCCCCATCTTCGTCGCT
TTTTACGACGTGGAGGCGGACGCGCCGTGGTTTGGATTGGTGCGCGTATG
TAGCATGAAAGACAAGACAGCAGAAACACAGGCTCAGCTTTTTTACGAGA
CGATCGTCGACACGCTCGGGTACCCAAAACACCAGGTGCTCTACGTGTTG
AGTGACAACACCGCGTCTGTTTCCTCTGAGGGGAAGGGTTGTGTGAAGCT
GTTGCAGAGAAAGCTACGGGGAGAGGATACCACCAAAAAATCCACAAAAA
GAGCTACAGGAGGCACCAGCAGCGGCAGCAGCAGCAGTGGTCGTGGTGTT
CAGCAACGAAACGCACCGGCGGCGGCGGCCGAACGGGCGGGGGCGGGCGG
GGGGCGGGCCAAACGCAAACAAACCGCCGCTGCAGAGGGAGCGGACAAAA
GGCAACGCAAACGGGGTGCAGGGGGGGGGAAAGGGAAAGGGAAAGGGAAA
GGGAAAACAGAGGCACCGCCGACTCCTCCTGCACCTACCAGGACGAGTGG
TCGCAACAGGACGCAGACATGGAAAATCCAGGAGGCAGATGGGGGGGGCA
GCTCGGCGGAAGAGAGCGGGTGTGAGAGCTGAAGCGTTTCACTGGTGTTG
ATACTTGCGTTCTTCAGAGATGCTCGCGTCTCTATTTGCAACTAGATGTC
ATGTGTTGGATGCGTTTTGTTGTGGAGGTCATGTGGTGGTGGGAGGGTTG
TTTTCAGTAGCTTCCTTCGTACGCGTGAGGTCTTTTCGCGTGTGACCGAA
GTTGAAGTTGAACGAGAAGTTTTGTGATTTTTGATGCGTTCGTGCGCGTG
AGCACGCACTCAACAAGAGCGTTGAGAAGCATGGTGTGAGAGATAGCAAA
CGACGCTCGACTCTGTCGTTATCTACCTGCGGCCTTCTGAGCTGCAGCCT
TCGTTTTGTACACATGATGGTGGTGTTGCACACGGAGAGGCAGAGCGATA
AAATGATGTTTGTGAAAGTAATGTTTCGCTGTTGATTTTTTTCCGACGAT
TTTTTTCCGACGATTTTTTTCCGACGATTTTTTTCCGACGATTTTTTTCC
GACTTGAAAGCAACGTCACTCAACCGCCGTCCACATTTACTCCGACTCTA
ATTCTGCTGCGGTCACCCGCGGCCGCCGATTCCCTTCCTTCTCTAACGTA
ACCAGCAAATCATCTGCAGCTTCCGGTTCCAATACTCTTTTTCTGCTCAA
GTTTTCGGCCGGTTTTCGTGCGTGGGAGACAGCCTTTGCTTCCCTTGCCT
TCTCCAAAACCTTTTTGCCAGCGGCACGGATTTTTTCGCCCGTCGCATCT
GCGCACACGATATCTCTAGACTCGGCTGACTTCCACCCCCCAACACGAAC
AATATCCATCTCAGCCATGTCCGTCTTCTGTGCGCATGAGTCGAACTTCG
AAAAGAAGGCTTCGATCAACTGCTGGTGAATGGGAACAAAGTAGAATCGG
TGACACACCAACTTGTACAGGAGGGGAAAATCGAACAGACGCGCCAACGC
TGACGTACCCTTTGGTGCACCCTGGTCAACCTCCTTGTCACCCCACCCAG
AATTCGCATACTGCTCGAGTTCGTTCCTCACAGAACGGTCGCTATCAATG
CGTGAAAACAGCCCGAACGTCAACTCATCTTTCCTTCTTGCATCGGTGGT
TCCCCCCAAATCCTTCACGAGCTGCGTTCGGTATTCCCTCTCCCTTTCCG
TGCGCGGCTCTCCCTCGTATAGAGCAGACCAAGCTACATGAAGGAAGGCA
CGCGCAAACTCCGGCCCCACCGCCTGCTCTACAGCCCCTTCCCCCATGAT
TCCTGTCCGAGCGAAAAACGAGGGGCATCCAATCCGCGCCATGCTCAGAG
GTAGCTGCTGATGCCGCTCCATCCACTTGATCCATCGCTGCTTGAACTCG
GCAAAAAAACCCTTGTCCTCACTGAAGTTTGTCATGAATAATTTCGCCTG
CAGCACGACAGCGACAGCGTTTGCGACCAGTTCAAGCGGTAAAAACATTA
GTGTCACCAGGCAAAAAGCAGAAGCAGTGGCACCAGTACTAGCGACAAGC
ACCAGCCGTTACAAGCAGTGAGAGGTAGTGGCGCGACAAGCAGAGGGAGG
TAGTAGCAGCAAGAGGGTGCGGAGAAATGTGGAGGGGGTAACGACGAAAG
CAAGTTGATGAGAGAGAAAAAAACGTGAAAATTCGCGATATTGCAAACCA
CCACGGCCGTTCACACAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCAGGC
TGAACCCCTCTCTGTTCCAAACTGCAATACTCAGGCCCGCCACCACTCAC
CATCGCTTCAGATAGGGTTGTTTGAACGCGTTCCAGGACCGCTGCGAAGT
AGGTCTTGGGGTCCTTGCGGATAGTCTCCAACTTGACCAGCAGCAGGCGA
GAGAAATCAGCCACCTCCACCAAACGCATCCCAGGAAACAGCTGCCGACC
GACCCCTTCGCCCTTCAAAAAGAACCCGCCCTTGCCACGAATCCAGTTGT
ACGCCCAGTCGAACAACAGCTCCCCGAGCCTTGCCGTGAACATAACATGC
ACACGAACCAGAGGGTCTCGCAGCATGTACGCCGATTGGAGCCAGTAGTT
CCTGAATGTGGTCTTGTTGAGGTTGCGAGCAGCGTACTCGCAAAAAAGCC
ACTCAACCTGCTCCCAGCGTTTACACAGGAGCATGAGCCCCGTCCATAAC
CACCATCCAACGCGTCTCGGCAGGTCTGACCAACTTGATGAGCCATGGCT
TCGCGTCCGGGAACTGCTGCTGCACTACCCTCTTCCACCGCTGAAAATTG
GCGTTCGAGGATTCCGAGCGGCTTGTGTTGTACCAAACCATACCAAGAAG
GGAGAAAACATGGTCGCGCTCCCACTCATGCCAGGAACCCTTACCAAGCG
GGCCCATGAAGTACACACTAGTCATGCCCGCAGTGATAGAGATGTGCAGG
ACGTGTAGAACACACCCCAGGCGATGCGCGTGAATGATGGGCGGCTCAAC
CTCGCTGCCGCCGCCGCCGCCGCCGCTGCTGCAGCTGCTGCCGTTTTTTT
CAGCAGCAGTAGCGGCGGCGGCAGGTGTCGGCGTGGCTTCACCGCCCGGC
TGCTGCTCGGGTGTGTTATAAGGCATGTGTTGTAGAGTGGAACCGCGCAG
AGGTGTTGTGGTTGTGCCCACAGCAGCAGTGCATATCAGAGCTCACACAC
GAGCGGCGCAACGGCGCCCTCGCGCGTACACGTCAGCTGTTTTTGGGGAG
CTTTCGGACCGTTCCGTGCAATTTAATTGGCCAGCTGATTTTCCATCAGC
AAGATCCGAGGTCGTTTTTTCAAATTTTTTCCTATAGGAAATTTGGCCGA
TTGACACCCCTAACTGTTCGTGTTGGTAACTTGTGGACATAAAAGCCCAC
TTTGAATGGCGAACGGAGGATCCATCAAAAAGGAGACAGCATCAAAAAGG
AGACAGCTGTCACAGCCCGCCAAAAAAAAGAGGGTGTGAACGCGACATTG
GCAATACATGCCCCAATCCACGTACCCGACAAGGCGGTCGTGCACCAGGC
CTCGGCTACACACAAGCGGGGCCGGGATTTTTTTCCACACC

protein sequence of Ec-00_000370.2

>Ec-00_000370.2 ID=Ec-00_000370.2|Name=Ec-00_000370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=270bp
MTQQLLQSTMYHTTGVRLKQDLNITCARNTVKVLALGITQLDGNELVKAI
LKAPFLLIAGDESLRNGDKKFPIFVAFYDVEADAPWFGLVRVCSMKDKTA
ETQAQLFYETIVDTLGYPKHQVLYVLSDNTASVSSEGKGCVKLLQRKLRG
EDTTKKSTKRATGGTSSGSSSSGRGVQQRNAPAAAAERAGAGGGRAKRKQ
TAAAEGADKRQRKRGAGGGKGKGKGKGKTEAPPTPPAPTRTSGRNRTQTW
KIQEADGGGSSAEESGCES*

mRNA from alignment at chr_00:538927..544410-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_000370.2 ID=Ec-00_000370.2|Name=Ec-00_000370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5484bp|location=Sequence derived from alignment at chr_00:538927..544410- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GGGCACACGGATTGGGTTCTTTTTCGGTTCTTTTGAATGCCCGCCTATTA
TACTGATTAAACAGTACATTACTCAGTTTCTTTGTGCAGTTAGACCTGCG
CCCAGGCCAAAGCGTGGCTCTTCATACGTTACACAGACCTGGACACAAGT
CCAATTGAGGTGACTGCGAGCTCGGTTTTCTCTTGAAGTTAAAGGGCGGA
CGAACAACCCCCAAAAACTAGGTTTTTCCCGGTTTTTTCAGCTGTTCTAC
TCACGTCCAAGGCGACCTTTGCTCCTATCGAAAAAGCGAGCTCGCAGTGC
TCTACGCTGGGTTTACAGCCTAACCCACACAACAAACCGAATACGAATCG
CATCAGCCACCCCCGATATCTAGATGTCCGAAAATGGCCCCTCCAGCGGC
TCTGCAGCGCCTGCTGCAGCCCCCGCACGTGACCCTACCAAAAAAAAAAA
ACGGAGGTCCGCTTTCGGCAGCAGCAGGCGCGCTGCACGAAATCTGAGGA
AAAGTGGAGATAAGTTTGAAGATAGGACGGGGAAGTCTGTAGCCGAGGCG
TCAGCAGCAAATAACACGCGGCGCGCTATCGAACGTGGCAGCCTCAACGT
CGTGGAGAGAGTGCTGGAGGAAACGAAGGAGGAGTTGGTCAAGAGTAAGA
AAATTGCGGTAGAGAGCCAGGCTAGCTGCAACATGGCGATGGAGTTTGCG
CGCGAGAAAGACGATGAGCTCAAGCGCGAGCGGGCACGGAGACAGCAGGC
GGAGCAAGAGAAACATGAGGCTACGCGAGAGCAGGAGGCGGCGGCCGCGA
GTCGGCGGCAGGCGGAAGAGAGAGTCCGCGACATGTCGAAGGAGCTGGCC
GGTCTGAAAGACTCGGTGAAATCGCTCCGCAAGACCAACGCCACCCTCTT
GGAGGATGCAGGGATACCAATCGTCGCCGACGATCCGCCCCCGGAGGAGG
ACAGCACCCGCAGCCTCGAGGATGAACTCTTGCTCGAGAAGGTGAAGGCC
GAAAGACTGCAGCGGAAGGTCGATTACCTCACGCCGATCGTGGCCGGACT
CAAGCGACAAGTTTCCAACGAGAAAAAAAAGGTGCGTGCGTGCGTGCGTG
CGTGCGTGCGTGTGTTTTTTGCAGTTGTTTTTTTCCCGTAAATTTTTACG
AGTAGAAGTATGTTTTTTTATATAGATGTCAACTTTATAGAACGTTTAGT
ACTACCTGCTGCTGGCTGCTGTGAGTCTACATGAGGTAGCTCTGGTGTCC
CTGCTCATTTGTAGTATAGCTATTATATTTGTATGCTTTATTTTTTGTTA
CAATGCCGTGATGTAGTTGTGCGCGCTGTAGCGCACGGATTCAAGCAGAA
ATTTAGCTGTTGTACACGGCGGAGTATACAAAAATCCGCTTCCGCTGCTG
CTGTACTGCCTATTCGATCATGTTGCAGACGAAGCGAGCCAAGCTTAATC
TTGGGAACCTCAAGGCTGACGAACCGGTGGGGGGGGCGGAGCAAGAGGAA
CCTGAGCAGGAGAGGGAAAAGGGTGGTGGGGAGTTGCTCTCTGCAGAGGA
TGAGAAGAAGGTGTTGGAGCGCGTCATCAAGAACCGTCTCAAACCCGGCG
GAAAATTTGGTGAGACTGCTGCCAGGCTATTTCAGTCGTTTGTGCAAGGG
GGCGTCTCTCTCAACATGACGCAGCAGCTGCTTCAGTCTACCATGTACCA
CACCACGGGGGTGCGACTCAAACAAGATCTCAACATCACGTGTGCCCGCA
ACACGGTCAAGGTTCTTGCTCTCGGCATTACGCAGCTAGATGGGAATGAG
TTGGTCAAAGCGATTCTCAAGGCGCCGTTTTTGCTGATTGCCGGTGACGA
GTCTCTCCGCAACGGGGACAAGAAGTTCCCCATCTTCGTCGCTTTTTACG
ACGTGGAGGCGGACGCGCCGTGGTTTGGATTGGTGCGCGTATGTAGCATG
AAAGACAAGACAGCAGAAACACAGGCTCAGCTTTTTTACGAGACGATCGT
CGACACGCTCGGGTACCCAAAACACCAGGTGCTCTACGTGTTGAGTGACA
ACACCGCGTCTGTTTCCTCTGAGGGGAAGGGTTGTGTGAAGCTGTTGCAG
AGAAAGCTACGGGGAGAGGATACCACCAAAAAATCCACAAAAAGAGCTAC
AGGAGGCACCAGCAGCGGCAGCAGCAGCAGTGGTCGTGGTGTTCAGCAAC
GAAACGCACCGGCGGCGGCGGCCGAACGGGCGGGGGCGGGCGGGGGGCGG
GCCAAACGCAAACAAACCGCCGCTGCAGAGGGAGCGGACAAAAGGCAACG
CAAACGGGGTGCAGGGGGGGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAA
CAGAGGCACCGCCGACTCCTCCTGCACCTACCAGGACGAGTGGTCGCAAC
AGGACGCAGACATGGAAAATCCAGGAGGCAGATGGGGGGGGCAGCTCGGC
GGAAGAGAGCGGGTGTGAGAGCTGAAGCGTTTCACTGGTGTTGATACTTG
CGTTCTTCAGAGATGCTCGCGTCTCTATTTGCAACTAGATGTCATGTGTT
GGATGCGTTTTGTTGTGGAGGTCATGTGGTGGTGGGAGGGTTGTTTTCAG
TAGCTTCCTTCGTACGCGTGAGGTCTTTTCGCGTGTGACCGAAGTTGAAG
TTGAACGAGAAGTTTTGTGATTTTTGATGCGTTCGTGCGCGTGAGCACGC
ACTCAACAAGAGCGTTGAGAAGCATGGTGTGAGAGATAGCAAACGACGCT
CGACTCTGTCGTTATCTACCTGCGGCCTTCTGAGCTGCAGCCTTCGTTTT
GTACACATGATGGTGGTGTTGCACACGGAGAGGCAGAGCGATAAAATGAT
GTTTGTGAAAGTAATGTTTCGCTGTTGATTTTTTTCCGACGATTTTTTTC
CGACGATTTTTTTCCGACGATTTTTTTCCGACGATTTTTTTCCGACTTGA
AAGCAACGTCACTCAACCGCCGTCCACATTTACTCCGACTCTAATTCTGC
TGCGGTCACCCGCGGCCGCCGATTCCCTTCCTTCTCTAACGTAACCAGCA
AATCATCTGCAGCTTCCGGTTCCAATACTCTTTTTCTGCTCAAGTTTTCG
GCCGGTTTTCGTGCGTGGGAGACAGCCTTTGCTTCCCTTGCCTTCTCCAA
AACCTTTTTGCCAGCGGCACGGATTTTTTCGCCCGTCGCATCTGCGCACA
CGATATCTCTAGACTCGGCTGACTTCCACCCCCCAACACGAACAATATCC
ATCTCAGCCATGTCCGTCTTCTGTGCGCATGAGTCGAACTTCGAAAAGAA
GGCTTCGATCAACTGCTGGTGAATGGGAACAAAGTAGAATCGGTGACACA
CCAACTTGTACAGGAGGGGAAAATCGAACAGACGCGCCAACGCTGACGTA
CCCTTTGGTGCACCCTGGTCAACCTCCTTGTCACCCCACCCAGAATTCGC
ATACTGCTCGAGTTCGTTCCTCACAGAACGGTCGCTATCAATGCGTGAAA
ACAGCCCGAACGTCAACTCATCTTTCCTTCTTGCATCGGTGGTTCCCCCC
AAATCCTTCACGAGCTGCGTTCGGTATTCCCTCTCCCTTTCCGTGCGCGG
CTCTCCCTCGTATAGAGCAGACCAAGCTACATGAAGGAAGGCACGCGCAA
ACTCCGGCCCCACCGCCTGCTCTACAGCCCCTTCCCCCATGATTCCTGTC
CGAGCGAAAAACGAGGGGCATCCAATCCGCGCCATGCTCAGAGGTAGCTG
CTGATGCCGCTCCATCCACTTGATCCATCGCTGCTTGAACTCGGCAAAAA
AACCCTTGTCCTCACTGAAGTTTGTCATGAATAATTTCGCCTGCAGCACG
ACAGCGACAGCGTTTGCGACCAGTTCAAGCGGTAAAAACATTAGTGTCAC
CAGGCAAAAAGCAGAAGCAGTGGCACCAGTACTAGCGACAAGCACCAGCC
GTTACAAGCAGTGAGAGGTAGTGGCGCGACAAGCAGAGGGAGGTAGTAGC
AGCAAGAGGGTGCGGAGAAATGTGGAGGGGGTAACGACGAAAGCAAGTTG
ATGAGAGAGAAAAAAACGTGAAAATTCGCGATATTGCAAACCACCACGGC
CGTTCACACAGCAGCAGCAGCAGCAGCAGCAGCAGCTCCAGGCTGAACCC
CTCTCTGTTCCAAACTGCAATACTCAGGCCCGCCACCACTCACCATCGCT
TCAGATAGGGTTGTTTGAACGCGTTCCAGGACCGCTGCGAAGTAGGTCTT
GGGGTCCTTGCGGATAGTCTCCAACTTGACCAGCAGCAGGCGAGAGAAAT
CAGCCACCTCCACCAAACGCATCCCAGGAAACAGCTGCCGACCGACCCCT
TCGCCCTTCAAAAAGAACCCGCCCTTGCCACGAATCCAGTTGTACGCCCA
GTCGAACAACAGCTCCCCGAGCCTTGCCGTGAACATAACATGCACACGAA
CCAGAGGGTCTCGCAGCATGTACGCCGATTGGAGCCAGTAGTTCCTGAAT
GTGGTCTTGTTGAGGTTGCGAGCAGCGTACTCGCAAAAAAGCCACTCAAC
CTGCTCCCAGCGTTTACACAGGAGCATGAGCCCCGTCCATAACCACCATC
CAACGCGTCTCGGCAGGTCTGACCAACTTGATGAGCCATGGCTTCGCGTC
CGGGAACTGCTGCTGCACTACCCTCTTCCACCGCTGAAAATTGGCGTTCG
AGGATTCCGAGCGGCTTGTGTTGTACCAAACCATACCAAGAAGGGAGAAA
ACATGGTCGCGCTCCCACTCATGCCAGGAACCCTTACCAAGCGGGCCCAT
GAAGTACACACTAGTCATGCCCGCAGTGATAGAGATGTGCAGGACGTGTA
GAACACACCCCAGGCGATGCGCGTGAATGATGGGCGGCTCAACCTCGCTG
CCGCCGCCGCCGCCGCCGCTGCTGCAGCTGCTGCCGTTTTTTTCAGCAGC
AGTAGCGGCGGCGGCAGGTGTCGGCGTGGCTTCACCGCCCGGCTGCTGCT
CGGGTGTGTTATAAGGCATGTGTTGTAGAGTGGAACCGCGCAGAGGTGTT
GTGGTTGTGCCCACAGCAGCAGTGCATATCAGAGCTCACACACGAGCGGC
GCAACGGCGCCCTCGCGCGTACACGTCAGCTGTTTTTGGGGAGCTTTCGG
ACCGTTCCGTGCAATTTAATTGGCCAGCTGATTTTCCATCAGCAAGATCC
GAGGTCGTTTTTTCAAATTTTTTCCTATAGGAAATTTGGCCGATTGACAC
CCCTAACTGTTCGTGTTGGTAACTTGTGGACATAAAAGCCCACTTTGAAT
GGCGAACGGAGGATCCATCAAAAAGGAGACAGCATCAAAAAGGAGACAGC
TGTCACAGCCCGCCAAAAAAAAGAGGGTGTGAACGCGACATTGGCAATAC
ATGCCCCAATCCACGTACCCGACAAGGCGGTCGTGCACCAGGCCTCGGCT
ACACACAAGCGGGGCCGGGATTTTTTTCCACACC

Coding sequence (CDS) from alignment at chr_00:538927..544410-

>Ec-00_000370.2 ID=Ec-00_000370.2|Name=Ec-00_000370.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=810bp|location=Sequence derived from alignment at chr_00:538927..544410- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGCAGCAGCTGCTTCAGTCTACCATGTACCACACCACGGGGGTGCG
ACTCAAACAAGATCTCAACATCACGTGTGCCCGCAACACGGTCAAGGTTC
TTGCTCTCGGCATTACGCAGCTAGATGGGAATGAGTTGGTCAAAGCGATT
CTCAAGGCGCCGTTTTTGCTGATTGCCGGTGACGAGTCTCTCCGCAACGG
GGACAAGAAGTTCCCCATCTTCGTCGCTTTTTACGACGTGGAGGCGGACG
CGCCGTGGTTTGGATTGGTGCGCGTATGTAGCATGAAAGACAAGACAGCA
GAAACACAGGCTCAGCTTTTTTACGAGACGATCGTCGACACGCTCGGGTA
CCCAAAACACCAGGTGCTCTACGTGTTGAGTGACAACACCGCGTCTGTTT
CCTCTGAGGGGAAGGGTTGTGTGAAGCTGTTGCAGAGAAAGCTACGGGGA
GAGGATACCACCAAAAAATCCACAAAAAGAGCTACAGGAGGCACCAGCAG
CGGCAGCAGCAGCAGTGGTCGTGGTGTTCAGCAACGAAACGCACCGGCGG
CGGCGGCCGAACGGGCGGGGGCGGGCGGGGGGCGGGCCAAACGCAAACAA
ACCGCCGCTGCAGAGGGAGCGGACAAAAGGCAACGCAAACGGGGTGCAGG
GGGGGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAACAGAGGCACCGCCGA
CTCCTCCTGCACCTACCAGGACGAGTGGTCGCAACAGGACGCAGACATGG
AAAATCCAGGAGGCAGATGGGGGGGGCAGCTCGGCGGAAGAGAGCGGGTG
TGAGAGCTGA

Synonyms

The feature 'Ec-00_000370.2' has the following synonyms


Synonym
Esi1086_0003
Esi_1086_0003