Ec-00_000110.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_000110.1
Unique NameEc-00_000110.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length229
Homology
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BLAST of Ec-00_000110.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.110e-137
Identity = 203/228 (89.04%), Postives = 215/228 (94.30%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG 684
            +LWWGWLGFNGGS+PSFV+MPAVAARVM VTVI GASGGISSL+ N+RLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGG+LY+FASALLLK HLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSG CAG+LYGG+GSSL A+I+FLMAVV WVG LTLLLFVVTKLTIGIR+SKEQEMAGMD SKHGGQTYPE Q GLR  DTPVLSVG
Sbjct:  233 ILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSLAANIIFLMAVVVWVGLLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPEFQSGLRCLDTPVLSVG 460
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BLAST of Ec-00_000110.1 vs. uniprot
Match: D7FGY6_ECTSI (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY6_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 1.870e-136
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 
Query:   82 MTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG 684
            MTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG
Sbjct:    1 MTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG 201
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BLAST of Ec-00_000110.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 9.350e-120
Identity = 181/228 (79.39%), Postives = 199/228 (87.28%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSVG 684
            MLWWGWLGFN GSV SFVA PAVAA+VM VTVIGGASGGI+SLLVN+  CGYWDTGSALNGIL GLVS+TAG+ TYEPEGAFVVG++GGVLY FAS LLL+ HLDDVVNA PVHLFGGMWGLV+AG F+SKF YA AYSEDRS TCAGILYGG+G +L A+IVFLMAV+AWVG LTLLLFVVTKLTIGIR+SK+QE+AGMD SKHGGQT+PEL P  R  D P  S G
Sbjct:  233 MLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTVDRPGSSFG 460
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BLAST of Ec-00_000110.1 vs. uniprot
Match: D7G242_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G242_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 2.360e-67
Identity = 108/214 (50.47%), Postives = 150/214 (70.09%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPA-VAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPEL 639
            +LWWGW GFNG S  +     A +AA+VM +T I  A G I++ ++ +   GYWD+G+A NG+LAGLV +TAG +T EPE A V+G++   +Y ++S L+LK  +DDVV+AVP+H F G+WG++A   FA+K  YA  YS +R+  CAG  YGG+GS+L   +VFL+A++AW     + LF+  K TIGIR+S+E E  GMD SKHGGQTYPE+
Sbjct:  249 ILWWGWYGFNGVSTLTLSGGGATIAAKVMVITTISAAFGAITNSVIGKVRLGYWDSGAANNGLLAGLVGITAGCSTCEPEAAMVIGIVAAFVYTYSSKLMLKLQIDDVVDAVPIHFFCGVWGVIAVSLFATKDNYANVYSAERADKCAGAFYGGDGSTLAVGLVFLLALIAWTVVTCMALFLGIKYTIGIRVSQEVEQIGMDDSKHGGQTYPEM 462
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BLAST of Ec-00_000110.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 4.960e-65
Identity = 109/216 (50.46%), Postives = 147/216 (68.06%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPG 648
            +LW+GW GFNG S    V    VAA+ M  T I  A G ++++L+ +   G+WD G+A NG+LAGLV VTAG +T EPEGA V+G+I G +Y ++S +L+   +DDVV+A+PVH F G WG+ AA  FA+K  Y  AY  DR+  CAG  YGG G+++GA+ VF++AV AWV      LF+  K+T+G+R+ KE E  GMD SKHGGQTYPE+  G
Sbjct:  244 ILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAY-YDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEMEQIGMDDSKHGGQTYPEMMKG 458
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BLAST of Ec-00_000110.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.550e-61
Identity = 108/206 (52.43%), Postives = 134/206 (65.05%), Query Frame = 1 
Query:    4 LWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGG 621
            LW+GW GFNG S    V    VAA+ M  + + GA GG+SS LV Q L G+ D  +A NGIL+G V++TAG+   +PEGA ++G I G++Y   S LLLK  +DDVVNA PVHLF GMWG+ A G  A    Y   Y EDRSG C G  YG  GS LGA IVF++  +AW G  + L+F V K T+G+R+SKE E  GMD SKHGG
Sbjct:  254 LWFGWYGFNGVSSLYIVGKGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGG 459
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BLAST of Ec-00_000110.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 5.840e-61
Identity = 102/216 (47.22%), Postives = 144/216 (66.67%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPG 648
            +LW+G       S  +   +  VAA+ M  T I  A G ++++L+ +   GYWD G+A NG+LAGLV VTAG +T EPEGA V+G+I G +Y ++S +L+   +DDVV+A+PVH F G WG+ AA  FA+K  Y+AAY  DR   CAG  YGG+G+++ A++VF++AV+AWV    + LF+     +G+R+ KE E  GMD SKHGGQTYPE+  G
Sbjct:  248 ILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEMEQIGMDDSKHGGQTYPEMVKG 463
[Close]
BLAST of Ec-00_000110.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.620e-60
Identity = 106/227 (46.70%), Postives = 146/227 (64.32%), Query Frame = 1 
Query:    1 MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPGLRGPDTPVLSV 681
            +LW GW GFNG S         VAA+VM V+ IG A+ G SS++ ++ +    D G+ALNG+L GLVS+T   A  EP GAF++GLIGGV+Y  ++ LL    +DD VNA PVH+F GMWG++AAG FA++  Y+ AY  DR+  CAGI YGGNGS+LGA+I F++ ++ WVG  T ++F   K    +R++ EQ+  GMD+ +HGG  + E Q    G  T    V
Sbjct:  255 ILWVGWYGFNGASTLYITHYSGVAAKVMVVSTIGAAAAGFSSVIFHKFMHNTVDLGAALNGVLGGLVSITGACAVIEPYGAFIIGLIGGVVYQLSAMLLESLKIDDCVNAAPVHMFCGMWGVIAAGLFATEQNYSNAYYSDRAEDCAGIFYGGNGSTLGANICFMICIILWVGATTSVMFGSLKAAGLLRLTDEQQATGMDILEHGGPAWVEFQTISNGAPTKYSKV 481
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BLAST of Ec-00_000110.1 vs. uniprot
Match: A0A7S2V0D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D8_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.830e-60
Identity = 104/193 (53.89%), Postives = 136/193 (70.47%), Query Frame = 1 
Query:   70 AARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGGQTYPELQPG 648
            AAR M  T I  A+  I+++ + + L G  D G A NG+LAGLVS+TA  +T   EGAF++G+IGG++Y  AS +L KF +DDVV+AVPVH+F GMWG++AAG FAS+  YA+AY  DR+  C G  YG  G++ GA++ F+ AV+AWV   +LLLF   K T+GIR+S E E AGMD SKHGGQTYPE   G
Sbjct:    4 AARTMVTTAIAAATAAITTVSLGKALTGVIDIGLANNGVLAGLVSITAPCSTCTGEGAFIIGIIGGLVYYGASKMLHKFKIDDVVDAVPVHMFCGMWGVIAAGLFASEENYASAYYGDRAADCCGAFYGCGGAAFGANLGFVFAVIAWVIGTSLLLFFGIKFTVGIRVSIEVEEAGMDSSKHGGQTYPEQAKG 196
[Close]
BLAST of Ec-00_000110.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.530e-57
Identity = 102/206 (49.51%), Postives = 132/206 (64.08%), Query Frame = 1 
Query:    4 LWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLLKFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKHGG 621
            LW+GW GFNG S         VAA+VM  + + GA GG+SS LV   + GY D  +A NGIL+G V++T  +   +PEGA ++G I G++Y  AS LLLK  +DDVVNA PVHLF GMWG+ A G  A +  Y  AY EDR+  C G  YG  G+ L A IVF++  +AW G  + ++F V K T+G+R+SKE E  GMD SKHGG
Sbjct:  259 LWFGWYGFNGVSTLLITGKGLVAAKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHGG 464
The following BLAST results are available for this feature:
BLAST of Ec-00_000110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7X8_9PHAE1.110e-13789.04Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FGY6_ECTSI1.870e-136100.00Ammonium_transp domain-containing protein n=1 Tax=... [more]
D7G265_ECTSI9.350e-12079.39Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
D7G242_ECTSI2.360e-6750.47Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
D7FR22_ECTSI4.960e-6550.46Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A835ZB85_9STRA1.550e-6152.43Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]
D7G243_ECTSI5.840e-6147.22Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S1UFZ4_9STRA1.620e-6046.70Ammonium transporter n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2V0D8_9STRA2.830e-6053.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZI90_9STRA1.530e-5749.51Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:155070..159299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score388.7
Seed ortholog evalue1.9e-105
Seed eggNOG ortholog2880.D7FGY6
Preferred nameamt-1
Length687
KEGG koko:K03320
KEGG TC1.A.11
Hectar predicted targeting categorysignal peptide
Gene idEc-00_000110.1
EggNOG free text desc.ammonium transmembrane transporter activity
EggNOG OGsCOG0004@1,KOG0682@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000110Ec-00_000110Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 155070..159299 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000110.1.4Ec-00_000110.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 155070..155194 -
Ec-00_000110.1.3Ec-00_000110.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 155985..156237 -
Ec-00_000110.1.2Ec-00_000110.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 156953..157183 -
Ec-00_000110.1.1Ec-00_000110.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 159222..159299 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000110.1CDS:Ec-00_000110.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 155070..155194 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000110.1Ec-00_000110.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 155070..159299 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_000110.1 ID=Ec-00_000110.1|Name=Ec-00_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=229bp
MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLC
GYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLL
KFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGIL
YGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGM
DVSKHGGQTYPELQPGLRGPDTPVLSVG*
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spliced messenger RNA

>Ec-00_000110.1 ID=Ec-00_000110.1|Name=Ec-00_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=687bp|location=Sequence derived from alignment at chr_00:155070..159299- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTGGTGGGGCTGGCTCGGGTTCAACGGGGGATCTGTACCCTCGTT
CGTGGCCATGCCGGCCGTGGCTGCGAGGGTGATGACGGTGACGGTCATCG
GCGGCGCCTCCGGCGGCATTAGCTCCCTCCTCGTCAACCAGCGGCTGTGC
GGGTACTGGGACACCGGGAGCGCCTTGAACGGCATTCTAGCCGGTCTCGT
GTCCGTTACCGCGGGCGCGGCGACCTACGAGCCCGAGGGGGCCTTCGTCG
TGGGTCTCATTGGCGGGGTGCTGTACCTCTTCGCGTCCGCCTTGCTGCTC
AAGTTTCACCTGGACGATGTCGTAAACGCGGTCCCAGTGCACCTCTTCGG
AGGCATGTGGGGCCTCGTTGCGGCTGGCTTCTTCGCGTCAAAGTTCGGCT
ACGCGGCGGCCTATTCCGAGGACAGGTCGGGCACGTGCGCCGGCATTCTG
TACGGCGGCAACGGCAGCTCTCTCGGTGCTAGCATCGTGTTCTTGATGGC
CGTGGTGGCCTGGGTGGGCTTCCTGACCCTCTTGCTCTTCGTGGTGACGA
AGCTGACCATAGGCATTCGCATCAGCAAGGAACAGGAGATGGCCGGAATG
GACGTCTCCAAGCACGGCGGACAAACGTATCCTGAACTTCAACCCGGTTT
ACGGGGCCCAGACACACCCGTTCTGTCGGTCGGGTAA
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protein sequence of Ec-00_000110.1

>Ec-00_000110.1 ID=Ec-00_000110.1|Name=Ec-00_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=229bp
MLWWGWLGFNGGSVPSFVAMPAVAARVMTVTVIGGASGGISSLLVNQRLC
GYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGVLYLFASALLL
KFHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGTCAGIL
YGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGM
DVSKHGGQTYPELQPGLRGPDTPVLSVG*
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mRNA from alignment at chr_00:155070..159299-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_000110.1 ID=Ec-00_000110.1|Name=Ec-00_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4230bp|location=Sequence derived from alignment at chr_00:155070..159299- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGTGGTGGGGCTGGCTCGGGTTCAACGGGGGATCTGTACCCTCGTT
CGTGGCCATGCCGGCCGTGGCTGCGAGGGTGCGTTGGGTGGTGCATTCGA
TCCAAAAAGTCTCAACCAAGCACGGGATGTTTTTTTTTCCCGGCACATAT
TGATGATTCTACTCACTCACTCCCTACCTCCCTCCCTCCCTACGTACCTG
AACGATTCTTTACCGACGGACAGACATACACAAACGCAAACCCCGGTTCT
TAGTCACTCACTCAATCACTAACTTTCTCACTCCCCACTCACTTACTCAC
TCACTCACTTGCTCACTCGCCTACTTATTACCTCACCTGTTCACGCTCAC
AAGCACATGCATATACTTTTGCCAACGCTCGCTCGCTGTCTGTTTACCCA
CTCACTCACTTACTCATTTCGCTCCTTTCTCTTTTTCTTTTCACTCACTG
GTTCCCTCACTCACTGCTTAACTCACCCACTCACTCACTCACTACCGACC
GAACAGCGCATCCAAACACAACGGCCACCGACGCCCTCACGCCCTCACGC
GACTCATTCACTCACTTACTCATTCCAAAAGTCACTCGTGAAATTTTGTG
GGCTGCGTTTCGCGCATTCGGCTTGCCTACGTCCCGCAAGAAGGGTTATT
GGAGGTTAACATTGTATTTGCTCAAAAATCGTTTTCTTCTTCTTCGAGTG
ACATGACGAAATCCCAAACACACATCGAACGAAACACTGAGGAATCGTGT
TGCCCAGGGCCGTCTCCGCCCTTCACCACTACTGGTAGATCAGTACAACG
TGCATGACATTCACACTCTGTCGCCTTATCTTGCGCTGGCCAACACCAAT
CGCTAGGCGAGCGCTACTACAACAAGTGTCGCACAGGCAGCATATTTGTG
TCGAACTGTCCCATGCCCAGATCCTTCCACCCCCAGTGGAAAGACTCCAG
GGCGGCAACGGGCTAGAATATTTTGAAAATCGCCGTCATCGGCTGATAGG
TATATATGGGTGTGTGTTTATTACTTCCTTTTAGCGAGAACAACCAGCCC
ACCTGTTTACCGACCCCGACTCGCTCAGTTCCGTGAACAACTGACATATC
ACGCATTGAAGGGCAACAGTTTCCACCCTCATCTCCTCCCCCGCCCCCAC
TCGTTTCCGAAACTAACAACCCAAGTCGTCCCACCAACCGCCTCCTCCGC
GGGGCTCTATCCATTCCCCCCCCTCCCCTAGCCCCCCCCCCCGGTGTTTG
CCATCGGGGTTGTGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCC
CCCCCCTCGGTGTTCGCCATCGGGACTGGGTTTTCGTCGCTTGGCAGCGA
TGTTGTAAAACAAGCCAATTCACCTCGTGAACTCGGCAACCAAGTTACCG
TTTTTTTTTTACCTCTGTTTTTTTCAATTTTGGTGGTACCATAATCGTGG
TCGAGTAGATCATGTTGTGCGGGGTGAAGAACCCTCACTCCGCGCAAGGG
GGAGGATCGCACCACGTTGCGTTTAAATGGTCAAGCATCCTCGAGGCAGT
TACACAGTGCCTATAACTGTCTCTGGAAGTGAAAGTACCAGAAAATAAAT
TAAGTCATACGCAGCTGTCATCCGTACGTAAGGAAGTAAGCACAAGATGC
CGAACACCCTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATA
CCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAAC
CCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGACAATGGTCTAAC
GACTACGGCATGCACGACTATGAGTACCCCCCTCCCCTTGTTCCTCCTCT
TCCACGTTACAACGATAATGTATGACGGGGATGAAAGCGTTCGCAGGTTT
ATCTACGCCTTTGCTCAACTCAGGTGCGGCCCACCTTAGCGACGCATGCC
GCAACAGACCATCGATGCATCGACCATCTGTGAGCCCCCCTCCATCTACC
CTTACGCATAACCGCAAGAATCCCTGAACGTAGAGTTAGTGTATAAGATG
AGAGTCACCCGCCCCCCCCATCTTCTGCGAAAAAGAAAAAAAAAAACGCT
GTCGTGGTTGTTACAGGTGATGACGGTGACGGTCATCGGCGGCGCCTCCG
GCGGCATTAGCTCCCTCCTCGTCAACCAGCGGCTGTGCGGGTACTGGGAC
ACCGGGAGCGCCTTGAACGGCATTCTAGCCGGTCTCGTGTCCGTTACCGC
GGGCGCGGCGACCTACGAGCCCGAGGGGGCCTTCGTCGTGGGTCTCATTG
GCGGGGTGCTGTACCTCTTCGCGTCCGCCTTGCTGCTCAAGTTTCACGTG
AGACACGGCCTCGATAATGAAGGTTTCAGGGTGCAGTCGTCTTGTGTACT
CCTCTCGTCTCGGCTTCGGCGAGGCGCGGTTAGGGTGCGATGGTCGATTT
TTCGCCGAGCCTTCTTCTCCTATTTGCCCGTTTGAGGCAATTTCACCCTC
AAGTGTTACACGCATGCGTACGGACGGGTCGAAAAGTATTGTGACCATCC
GCACCGCATTGAGGCCTGGTGCAAGGCTTCCAGGATATTGGAATTCATGG
GCACCCACACATTAGAGAGCGATAGCACCTGACGCCCATCTCACACCGAT
GACCAGGCGAGCTGGCCTGTTTCAAGGAAACGGCAGAAGAATTATTACTC
CATACTCCCGGCGGCAAAGCAATTATTTGCGCTACAGATGTTTCAACGAT
CAGGTGTCATTTGTTGCTTGGTTTGACCTCCAGCCCACGTGTAACTTGTG
GTATTGTGGTCCACACAGTAGTGCGAAGGTCGTCACATTGCGTTGACTCG
CAGCCATACACACACGACCACGTACGCTTTGCGCTATTTTAATACGTGCA
TTGGTCTCCGCCCCTTCCCCACCAATCACGTGGAAGACAAGCCCCCCCCC
CCCAAGACCTGTGATTCCCTCTCCTTGCCCACCACGCATTACGCGGGCGA
TGCTCTGAACACTGCTCCCAACCCTCAACACGGTCTGCTGTACCCGTTCG
CCCCGCCGTCAGCTGGACGATGTCGTAAACGCGGTCCCAGTGCACCTCTT
CGGAGGCATGTGGGGCCTCGTTGCGGCTGGCTTCTTCGCGTCAAAGTTCG
GCTACGCGGCGGCCTATTCCGAGGACAGGTCGGGCACGTGCGCCGGCATT
CTGTACGGCGGCAACGGCAGCTCTCTCGGTGCTAGCATCGTGTTCTTGAT
GGCCGTGGTGGCCTGGGTGGGCTTCCTGACCCTCTTGCTCTTCGTGGTGA
CGAAGCTGACCATAGGTGAGACGGAAGAGGAAGAGGGATGGAGGCGGGGG
TGGAGAAAGGAGGAGTCGCGAAAAATGTAGCGAGGTGGGTGAGTCTTGTC
GTCCCTGTCGTCGTTTTTCTTTTTGTTGTGGGGGTTGATGTACTGGCTTG
CTTCTGCTTGGGGTCGGATTGCGGCGGCGGTGGTCGTGGTGACGTGGGTG
TTCCCGCCCCACAATCAACCCCAGGGCTCTCGTGGCAACAATGGCCTCCA
AAGATCATTGGCGAGGAGGGAGGTGGAGCACCACACAGTCTGATGGCGCG
ACAGTGGCTCCTTCTAGAAAACAACGGGTGCACCAATCCCCGCCTTGATG
AATACTGCAGGCTTGGTCGGCGTTAACGTACTCCTGCCTCTGGCTTGGTT
TGCCATTGGCGCCATTTACGGGTTTGCCGGTCTCTGCTGTCTGCTTGTAG
CTCTTTTGAAATCCGCTGAAGGTCTGCTGCCACAGAGAGGGAGACACACA
CACAGGGAGTTCGTTTGTGCATGCACACCACAAATCACCATAAACAACGA
TAGCAGCAGCAGCAGCAGCAGCAGCAGTACAAATTAACAGCAATAACCCC
GCCACCGCCAACAGCAGCAGCAGTACAAATTAACAGCAACACGCAACGAG
ATCGACCACATGAAACCGAAAAACATGATGCAGTAGCGAGATTCGCGCTC
CAACCGAAGCATGGCACCGTAGCGAGATTTCGTGTACGTCTCGCTCTTTC
GTCATCCAAGCGACCGACCTCATGCGCTCTTTCTCGGCCAATGCGCCGTC
GACAGGCATTCGCATCAGCAAGGAACAGGAGATGGCCGGAATGGACGTCT
CCAAGCACGGCGGACAAACGTATCCTGAACTTCAACCCGGTTTACGGGGC
CCAGACACACCCGTTCTGTCGGTCGGGTAA
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Coding sequence (CDS) from alignment at chr_00:155070..159299-

>Ec-00_000110.1 ID=Ec-00_000110.1|Name=Ec-00_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=687bp|location=Sequence derived from alignment at chr_00:155070..159299- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGTGGTGGGGCTGGCTCGGGTTCAACGGGGGATCTGTACCCTCGTT
CGTGGCCATGCCGGCCGTGGCTGCGAGGGTGATGACGGTGACGGTCATCG
GCGGCGCCTCCGGCGGCATTAGCTCCCTCCTCGTCAACCAGCGGCTGTGC
GGGTACTGGGACACCGGGAGCGCCTTGAACGGCATTCTAGCCGGTCTCGT
GTCCGTTACCGCGGGCGCGGCGACCTACGAGCCCGAGGGGGCCTTCGTCG
TGGGTCTCATTGGCGGGGTGCTGTACCTCTTCGCGTCCGCCTTGCTGCTC
AAGTTTCACCTGGACGATGTCGTAAACGCGGTCCCAGTGCACCTCTTCGG
AGGCATGTGGGGCCTCGTTGCGGCTGGCTTCTTCGCGTCAAAGTTCGGCT
ACGCGGCGGCCTATTCCGAGGACAGGTCGGGCACGTGCGCCGGCATTCTG
TACGGCGGCAACGGCAGCTCTCTCGGTGCTAGCATCGTGTTCTTGATGGC
CGTGGTGGCCTGGGTGGGCTTCCTGACCCTCTTGCTCTTCGTGGTGACGA
AGCTGACCATAGGCATTCGCATCAGCAAGGAACAGGAGATGGCCGGAATG
GACGTCTCCAAGCACGGCGGACAAACGTATCCTGAACTTCAACCCGGTTT
ACGGGGCCCAGACACACCCGTTCTGTCGGTCGGGTAA
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Synonyms
The feature 'Ec-00_000110.1' has the following synonyms
Synonym
Esi1024_0001
Esi_1024_0001