prot_Ecto-sp6_S_contig99.18873.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18873.1
Unique Nameprot_Ecto-sp6_S_contig99.18873.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp6_S_contig99.18873.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 4.660e-163
Identity = 237/247 (95.95%), Postives = 243/247 (98.38%), Query Frame = 0 
Query:    1 MGVSLLKLGVGLSVALGLGRAQPSGVKRASVERGGLVFQSDACPQAISKEEAAALEADDSLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVTMPEQDTVLPTENGDRLELRHNTYSFSSADAALRTEHLGFGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKDEGEEERRSLLRATSAEEGEDKRNAGSSPRGKGQSLVVHMRSGD 247
            MGVSLLKLGVGLSVALGLGRAQPSGVKRASVERGGLVFQSDACPQAISKEEAAALEAD+SLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVV MPEQDTVLPTENGD LELRHNTYSFSSADAALRTEHLG+GDI+TDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFC WKDEG+EERRSLLRATSA EGEDKR+AGSSP+GKGQSLVVHMRSGD
Sbjct:    1 MGVSLLKLGVGLSVALGLGRAQPSGVKRASVERGGLVFQSDACPQAISKEEAAALEADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKDEGKEERRSLLRATSAVEGEDKRHAGSSPQGKGQSLVVHMRSGD 247
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BLAST of mRNA_Ecto-sp6_S_contig99.18873.1 vs. uniprot
Match: D8LSV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV8_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.470e-105
Identity = 150/158 (94.94%), Postives = 156/158 (98.73%), Query Frame = 0 
Query:   90 MSFCCQYKVVTMPEQDTVLPTENGDRLELRHNTYSFSSADAALRTEHLGFGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKDEGEEERRSLLRATSAEEGEDKRNAGSSPRGKGQSLVVHMRSGD 247
            MSFCCQYKVVTMPEQDTVLPTENGD LELRHNTYSFSSADAALRTEHLG+GDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKDEGEEERRSLLRATSAEEG+DKRNAG+SPRGKGQSLVVH++ G+
Sbjct:    1 MSFCCQYKVVTMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKDEGEEERRSLLRATSAEEGQDKRNAGTSPRGKGQSLVVHIKRGN 158
[Close]
BLAST of mRNA_Ecto-sp6_S_contig99.18873.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.720e-32
Identity = 84/225 (37.33%), Postives = 122/225 (54.22%), Query Frame = 0 
Query:   33 RGGLVFQSDACPQAISKEEAAALEADDSLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVTMPEQDTVLPTENGDRLELRHNTYSFSSADAALRTEHLGFGDISTDPE-------ICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCSWKD---EGEEERRSLLRATSAEEGEDKRNAGSSPRGKGQSLVVHMRSGD 247
            R G+V Q   CPQAIS +EA    +    PGG+L++ S++ IGRSGNHY  ++ +FSM+FCCQ KV+ +P+ D  LPTE+G+R +   N +SFS             G + TD E       +CP  + + G         G+H  L +CM  V+M GC A +L + +G + A  S +    E E+E   L+  T++    ++R AGS        LVVH+RSGD
Sbjct:   38 RHGVVVQDRGCPQAISPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHI--RGLHPHLQKCMRNVKMRGCEAAYLKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPL--ERRGAGS--------LVVHVRSGD 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0Z0_9PHAE4.660e-16395.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSV8_ECTSI1.470e-10594.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE3.720e-3237.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:657552..661167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18873.1mRNA_Ecto-sp6_S_contig99.18873.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 657552..661167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18873.1 ID=prot_Ecto-sp6_S_contig99.18873.1|Name=mRNA_Ecto-sp6_S_contig99.18873.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=247bp
MGVSLLKLGVGLSVALGLGRAQPSGVKRASVERGGLVFQSDACPQAISKE
EAAALEADDSLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVT
MPEQDTVLPTENGDRLELRHNTYSFSSADAALRTEHLGFGDISTDPEICP
PIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFC
SWKDEGEEERRSLLRATSAEEGEDKRNAGSSPRGKGQSLVVHMRSGD
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