prot_Ecto-sp6_S_contig99.18862.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18862.1
Unique Nameprot_Ecto-sp6_S_contig99.18862.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: F0YDV4_AURAN (Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDV4_AURAN)

HSP 1 Score: 100 bits (248), Expect = 7.570e-27
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            QPSHKTFRTK TL KKMKQNRPIPQWIR+RTDN IR+NAKRRHWRRTKLGL
Sbjct:    1 QPSHKTFRTKRTLAKKMKQNRPIPQWIRMRTDNKIRWNAKRRHWRRTKLGL 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: H3G5I2_PHYRM (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3G5I2_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 1.530e-26
Identity = 46/51 (90.20%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            QPSHKTFRTK  L KK KQNRPIPQWIRLRTDNTI+YNAKRRHWRRTKLGL
Sbjct:    1 QPSHKTFRTKRILAKKAKQNRPIPQWIRLRTDNTIKYNAKRRHWRRTKLGL 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: A0A225VYY8_9STRA (60S ribosomal protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYY8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.550e-26
Identity = 46/51 (90.20%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            QPSHKTFRTK  L KK KQNRPIPQWIRLRTDNTI+YNAKRRHWRRTKLGL
Sbjct:   21 QPSHKTFRTKRILAKKAKQNRPIPQWIRLRTDNTIKYNAKRRHWRRTKLGL 71          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: A0A835YZW6_9STRA (Ribosomal protein L39e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.240e-26
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK TL  K+KQNRPIP WIRLRTDNTIRYNAKRRHWRRTKLGL
Sbjct:    2 PSHKTFRTKRTLAVKLKQNRPIPNWIRLRTDNTIRYNAKRRHWRRTKLGL 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: A0A024TQR4_9STRA (60S ribosomal protein L39 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQR4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.790e-25
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK  L KK KQNRPIPQWIRL+T NTIRYNAKRRHWRRTKLGL
Sbjct:    2 PSHKTFRTKTILAKKQKQNRPIPQWIRLKTGNTIRYNAKRRHWRRTKLGL 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: T0QFN5_SAPDV (60S ribosomal protein L39 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QFN5_SAPDV)

HSP 1 Score: 97.1 bits (240), Expect = 1.840e-25
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHK+FRTK  L KKMKQNRPIPQWIRL+T NTIRYNAKRRHWRRTKLGL
Sbjct:   17 PSHKSFRTKTILAKKMKQNRPIPQWIRLKTGNTIRYNAKRRHWRRTKLGL 66          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: W4GQW8_9STRA (60S ribosomal protein L39 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQW8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.610e-25
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK  L KK KQNRPIPQWIRL+T NTIRYNAKRRHWRRTKLGL
Sbjct:   29 PSHKTFRTKTILAKKQKQNRPIPQWIRLKTGNTIRYNAKRRHWRRTKLGL 78          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: G5AEA8_PHYSP (Uncharacterized protein n=14 Tax=Stramenopiles TaxID=33634 RepID=G5AEA8_PHYSP)

HSP 1 Score: 95.9 bits (237), Expect = 3.620e-25
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK  L KK KQNRPIPQWIRLRT+NTI+YNAKRRHWRRTKLGL
Sbjct:    2 PSHKTFRTKRILAKKAKQNRPIPQWIRLRTNNTIKYNAKRRHWRRTKLGL 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: M4B7W1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7W1_HYAAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.730e-25
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK  L KK KQNRPIPQWIRLRTDNTI+YNAKRRHWRRTKLG 
Sbjct:    2 PSHKTFRTKRILAKKAKQNRPIPQWIRLRTDNTIKYNAKRRHWRRTKLGF 51          
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Match: K3WT32_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT32_GLOUD)

HSP 1 Score: 95.9 bits (237), Expect = 6.030e-25
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK  L KK KQNRPIPQWIRLRT NTI+YNAKRRHWRRTKLGL
Sbjct:    2 PSHKTFRTKQILAKKQKQNRPIPQWIRLRTGNTIKYNAKRRHWRRTKLGL 51          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YDV4_AURAN7.570e-2790.20Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomon... [more]
H3G5I2_PHYRM1.530e-2690.20Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A225VYY8_9STRA2.550e-2690.2060S ribosomal protein n=1 Tax=Phytophthora megakar... [more]
A0A835YZW6_9STRA6.240e-2690.00Ribosomal protein L39e n=1 Tax=Tribonema minus Tax... [more]
A0A024TQR4_9STRA1.790e-2588.0060S ribosomal protein L39 n=2 Tax=Aphanomyces inva... [more]
T0QFN5_SAPDV1.840e-2588.0060S ribosomal protein L39 n=1 Tax=Saprolegnia dicl... [more]
W4GQW8_9STRA3.610e-2588.0060S ribosomal protein L39 n=2 Tax=Aphanomyces asta... [more]
G5AEA8_PHYSP3.620e-2588.00Uncharacterized protein n=14 Tax=Stramenopiles Tax... [more]
M4B7W1_HYAAE4.730e-2588.00Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
K3WT32_GLOUD6.030e-2588.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10coord: 1..51
e-value: 2.5E-31
score: 109.2
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 3..50
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 9..49
e-value: 2.5E-23
score: 81.4
IPR000077Ribosomal protein L39ePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 2..50
NoneNo IPR availablePANTHERPTHR19970:SF21coord: 2..50
NoneNo IPR availablePRODOMPD007914coord: 2..37
e-value: 2.0E-10
score: 152.0
IPR020083Ribosomal protein L39e, conserved sitePROSITEPS00051RIBOSOMAL_L39Ecoord: 30..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:479047..480104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18862.1mRNA_Ecto-sp6_S_contig99.18862.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 479047..480104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18862.1 ID=prot_Ecto-sp6_S_contig99.18862.1|Name=mRNA_Ecto-sp6_S_contig99.18862.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=52bp
QPSHKTFRTKVTLGKKMKQNRPIPQWIRLRTDNTIRYNAKRRHWRRTKLG
L*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023626Ribosomal_L39e_dom_sf
IPR000077Ribosomal_L39
IPR020083Ribosomal_L39_CS