prot_Ecto-sp6_S_contig99.18860.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18860.1
Unique Nameprot_Ecto-sp6_S_contig99.18860.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length380
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 3.040e-178
Identity = 286/343 (83.38%), Postives = 289/343 (84.26%), Query Frame = 0
Query:   37 AEEAXXXXXXAGRRRPPGVLDKETRRRVLNYFVLRPPEEKNGDSNHKSGSGSSSNPSNTAQREGDIGGSGRGIRFPKLARGGGNASGISGAGSGRLFVGVFSPYRAPVSGSPPRPPGAASXXSLRSXXXXXXXXXXRRAGRDAYNTAEHVDQERTAADREEGSXXXXXXXXXXGDSATDSGTNRPAGGEIRDAAAAGAAAGSETDVVVAEASAGEKAPGAGDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGITGQGTRRWGRHLPNNNYTGNDAA 379
            AEEA      AGRRRPPGVLDKETRRRVLNYF                       PSNTAQREGDIGGSGRGIRFPKLAR GGNASGISGAGSGRLF GVFSPYRAP SGSPPRPPGAA XXSLRS XXXXXXXXXRRAGRDAY+TAEHVDQER AADREEG            + ATDS TNRPAGGEIRDAAAAG AAGSETDVVVAEASAGEKA   GDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGITGQ TRRWG+HLPNNNYTGNDAA
Sbjct:    5 AEEARLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXXXXXPSNTAQREGDIGGSGRGIRFPKLARVGGNASGISGAGSGRLFAGVFSPYRAPASGSPPRPPGAAXXXSLRSPXXXXXXXXXRRAGRDAYSTAEHVDQERAAADREEGLAAAAAALASDAEPATDSCTNRPAGGEIRDAAAAGPAAGSETDVVVAEASAGEKA---GDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGITGQDTRRWGQHLPNNNYTGNDAA 344          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 8.960e-151
Identity = 259/344 (75.29%), Postives = 271/344 (78.78%), Query Frame = 0
Query:   38 EEAXXXXXXAGRRRPPGVLDKETRRRVLNYFVLRPPEEKNGDSNHKSGSGSS-SNPSNTAQREGDIGGSGRGIRFPKLARGGGNASGISGAGSGRLFVGVFSPYRAPVSGSPPRPPGAASXXSLRSXXXXXXXXXX-RRAGRDAYNTAEHVDQERTAADREEGSXXXXXXXXXXGDSATDSGTNRPAGGEIRDAAAAGAAAGSETDVVVAEASAGEKAPGAGDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGITGQGTRRWGRHLPNNNYTGNDAA 379
            EEA      AGRRRPPGVLDKETRRRVLNYF                    S SNPSNTAQREGDI GSGRG+RFPKLARGG  ASG SGAGSGRLFVGV SP RAP SGSPPRP     XX    XXXXXXXXXX RRAGRDA+NTAEH+DQER AA+REEG            +  TDSGT+RPAGGEIR AAA GAAA +ETDVVV   S GE+APGAGDEG S PRTDA GGV GEEAKGEGST GSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDI+STSGYL+PAGSS NNNAVRSGITGQ TRRWG+H+PNNNYTGNDAA
Sbjct:    9 EEATLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXXSRSNPSNTAQREGDICGSGRGVRFPKLARGGSIASGTSGAGSGRLFVGVLSPCRAPASGSPPRPXXXXXXXXXXXXXXXXXXXXXXRRAGRDAFNTAEHIDQERAAANREEGLPAAAAVLASDAEPETDSGTDRPAGGEIRAAAAEGAAARNETDVVVVGTSVGEEAPGAGDEGSSYPRTDA-GGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYLNPAGSSINNNAVRSGITGQDTRRWGQHMPNNNYTGNDAA 351          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 7.390e-17
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 0
Query:  282 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGIT 357
            S+G SCI+CFG+Y  G+ LCRL C H YHA+CID WLDG  H WCPLCK+ ++  S   +P   S+N+    +G T
Sbjct:  453 SSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPS---EPRNGSDNDEIGGAGGT 525          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.270e-15
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  279 GEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGS 345
            GE STG +CIVCFGDY  G+ L RL C H+YHA+CIDEWLD      CPLCKTD+   +   DP  S
Sbjct:  251 GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRS 317          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.430e-14
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  279 GEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDI 333
            GE STG +CIVCF DY  G+ L RL C H+YHA+CIDEWLD      CPLCKTD+
Sbjct:  151 GEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 205          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 4.710e-14
Identity = 103/356 (28.93%), Postives = 142/356 (39.89%), Query Frame = 0
Query:    1 MNARRVHPGSVIIFVLSVAYCGVLIRRQRVETARLAAEEAXXXXXXAGRRRPPGVLDKETRRRVLNYFVLRP-PEEKNGDSNHKSGSGSSSNPSNTAQREGDIGGSGRGIRFPKLAR-------------------GGGNASGISGAGSGRLFVGVFSPYRAPVSGSPPRPPGAASXXSLRSXXXXXXXXXXRRAGRDAYNTAE--HVDQERTAADREEGSXXXXXXXXXXGDSATDSGTNRP-AGGEIRDAAAAGAAAGSETDVVVAEASAGEKAPGAGDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDI 333
            +N R +HP S+++F+LSV+YC  ++RRQ   T     E         GR        KE R+ ++ YFV    PE    ++   +G+G   N     Q+E   G SG  ++  + +                     G   S    A +GR+         +  + +P    G  S   L              A  DA  TA   H     TAA                   AT +G   P A GE               D    +ASA  KA  A ++ P+  ++D+          GE STG +CIVCFGDY  G+ L  L C H+YHA+CIDEWLD      CPLCKTD+
Sbjct:  104 LNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTRE---------GRNNS---FTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGN--RPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATA-EDAAVTASPGHATAAVTAA-------------------ATPTGPELPRATGE---------------DAAEEQASAAAKA--AAEDDPTRAQSDS----------GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDL 398          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: A0A836CLU7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.390e-11
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  287 CIVCFGDYTYGEELCRLRCG--HLYHAKCIDEWLDGENHGWCPLCKTDIM 334
            C++C GDYT GE LCRL C   H+YH +CI+ WLDG  H  CP CK D+M
Sbjct:   73 CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDG--HSTCPYCKYDLM 120          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: UPI001FB0D3CE (RING finger protein 11-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0D3CE)

HSP 1 Score: 68.2 bits (165), Expect = 7.240e-10
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  282 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMST 336
            STG  C +C  DY +GE++C+LRC H+YH  CI  WL  +N  +CP+CK     T
Sbjct:  124 STGEDCCICQEDYIHGEDICKLRCNHVYHIDCIKRWLTQKN--FCPICKAPANQT 176          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: UPI001FB110A6 (E3 ubiquitin-protein ligase RNF6-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB110A6)

HSP 1 Score: 66.2 bits (160), Expect = 1.740e-8
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  284 GGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIM 334
            G +C +C  DY +GE++C+LRC H+YH  CI  WL  +N  +CP+CK   M
Sbjct:  247 GEACCICLEDYIHGEDICKLRCNHIYHFDCIKRWLMQKN--FCPMCKAPAM 295          
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Match: A0A7N0TIX2_KALFE (RING-type E3 ubiquitin transferase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TIX2_KALFE)

HSP 1 Score: 61.6 bits (148), Expect = 5.980e-8
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:  286 SCIVCFGDYTYGEELCRL-RCGHLYHAKCIDEWLDGENHGWCPLCKTDIM 334
            SC+VC  D  +G+E  +L +CGH +HA+CID W +      CPLC+T + 
Sbjct:   44 SCVVCLTDLAHGDEFQQLPKCGHCFHARCIDAWFESSGSATCPLCRTLVF 93          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX3_ECTSI3.040e-17883.38RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE8.960e-15175.29RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI7.390e-1751.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI2.270e-1558.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE2.430e-1463.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI4.710e-1428.93RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CLU7_9STRA2.390e-1158.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
UPI001FB0D3CE7.240e-1047.27RING finger protein 11-like n=1 Tax=Impatiens glan... [more]
UPI001FB110A61.740e-847.06E3 ubiquitin-protein ligase RNF6-like n=1 Tax=Impa... [more]
A0A7N0TIX2_KALFE5.980e-844.00RING-type E3 ubiquitin transferase n=1 Tax=Kalanch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..50
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 203..338
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..379
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 280..338
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 287..329
e-value: 1.0E-5
score: 35.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 286..330
e-value: 5.8E-10
score: 39.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 287..330
score: 11.501
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 272..342
e-value: 1.8E-16
score: 61.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:440262..443813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18860.1mRNA_Ecto-sp6_S_contig99.18860.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 438962..443813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18860.1 ID=prot_Ecto-sp6_S_contig99.18860.1|Name=mRNA_Ecto-sp6_S_contig99.18860.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=380bp
MNARRVHPGSVIIFVLSVAYCGVLIRRQRVETARLAAEEARLEAEEAGRR
RPPGVLDKETRRRVLNYFVLRPPEEKNGDSNHKSGSGSSSNPSNTAQREG
DIGGSGRGIRFPKLARGGGNASGISGAGSGRLFVGVFSPYRAPVSGSPPR
PPGAASPPSLRSPPPPYASPPPRRAGRDAYNTAEHVDQERTAADREEGSA
AAAAALASGGDSATDSGTNRPAGGEIRDAAAAGAAAGSETDVVVAEASAG
EKAPGAGDEGPSCPRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEEL
CRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNN
AVRSGITGQGTRRWGRHLPNNNYTGNDAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD