mRNA_Ecto-sp6_S_contig99.18821.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: D7FUM5_ECTSI (Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM5_ECTSI) HSP 1 Score: 141 bits (355), Expect = 3.790e-37 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3
Query: 207 MADASEVEAQVIEVVGEQLEKQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISANV 443
MADASEVEAQVIEVVGEQLEKQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAV+YISANV
Sbjct: 1 MADASEVEAQVIEVVGEQLEKQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVDYISANV 79
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A2E2WE29_9DELT (Acyl carrier protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2E2WE29_9DELT) HSP 1 Score: 83.2 bits (204), Expect = 4.600e-16 Identity = 42/72 (58.33%), Postives = 62/72 (86.11%), Query Frame = 3
Query: 219 SEVEAQVIEVVGEQLEKQGS-VKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYI 431
+E+EA++IE++GEQL K S + ++SNF+EDLDADSLDTVE++M+LEE+F IEI +D A+K+ TV+ AV++I
Sbjct: 2 NEIEAKIIEIIGEQLGKDASEITMESNFMEDLDADSLDTVELVMALEEEFGIEIPDDAAEKITTVQSAVDFI 73
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A424R108_9GAMM (Acyl carrier protein n=2 Tax=Cellvibrionales TaxID=1706369 RepID=A0A424R108_9GAMM) HSP 1 Score: 82.0 bits (201), Expect = 1.140e-15 Identity = 44/75 (58.67%), Postives = 61/75 (81.33%), Query Frame = 3
Query: 219 SEVEAQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISAN 440
S +E +VI++V EQL K+ ++ S+F+EDL ADSLDTVE+IM+LEE+FD EI ++DA+K+ TVKDAV+YI AN
Sbjct: 2 SNIEERVIKMVAEQLGVKEDDIQSTSSFVEDLGADSLDTVELIMALEEEFDAEIPDEDAEKIATVKDAVDYIQAN 76
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A7C6RA73_9FIRM (Acyl carrier protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6RA73_9FIRM) HSP 1 Score: 81.6 bits (200), Expect = 1.520e-15 Identity = 42/72 (58.33%), Postives = 62/72 (86.11%), Query Frame = 3
Query: 231 AQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISANV 443
A+V E++ EQL +G +K++S+FI+DL ADSLD VE+IM+LEE+FD+EIS+++A+K+VTV DAVEY+ AN+
Sbjct: 5 ARVKEILAEQLGIDEGEIKLESSFIDDLGADSLDVVELIMALEEEFDLEISDEEAEKIVTVGDAVEYLKANL 76
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A0R2W8S4_9GAMM (Acyl carrier protein n=2 Tax=SAR92 clade TaxID=745004 RepID=A0A0R2W8S4_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 1.570e-15 Identity = 44/75 (58.67%), Postives = 62/75 (82.67%), Query Frame = 3
Query: 219 SEVEAQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISAN 440
S +E +VI++V EQL K+ VKI S+F+EDL ADSLDTVE+IM+LEE+FD EI ++DA+K+ TV+DA+ YI+A+
Sbjct: 2 SNIEERVIKMVAEQLGVKEEDVKITSSFVEDLGADSLDTVELIMALEEEFDAEIPDEDAEKIATVQDAISYITAH 76
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A2G6NPL5_9DELT (Acyl carrier protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2G6NPL5_9DELT) HSP 1 Score: 81.6 bits (200), Expect = 1.650e-15 Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 3
Query: 222 EVEAQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISAN 440
E+ +V +VV EQL+ + S+K DS F++DL ADSLDTVE+IM+LEE FDIEI +DDA+K++T+KDAVEYI+++
Sbjct: 5 EILDKVKKVVKEQLDVDEASIKEDSKFMDDLGADSLDTVELIMALEENFDIEIPDDDAEKIITIKDAVEYIASH 78
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: K2BNL9_9BACT (Acyl carrier protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2BNL9_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 2.120e-15 Identity = 42/73 (57.53%), Postives = 63/73 (86.30%), Query Frame = 3
Query: 216 ASEVEAQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYI 431
A+E+EA+V ++V EQL K+ VKID++F++DL ADSLDTVE++M+LEE+F+ EI ++DA+K++T+KDAV YI
Sbjct: 5 ANEIEARVKKIVVEQLGVKEDDVKIDASFVDDLGADSLDTVELVMALEEEFETEIPDEDAEKIITIKDAVNYI 77
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A3D3SXH3_9GAMM (Acyl carrier protein n=5 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3D3SXH3_9GAMM) HSP 1 Score: 80.1 bits (196), Expect = 5.620e-15 Identity = 41/76 (53.95%), Postives = 63/76 (82.89%), Query Frame = 3
Query: 219 SEVEAQVIEVVGEQLE-KQGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISANV 443
S ++ +V+++V EQL K+ VK DS+F++DL ADSLDTVE+IM+LEE+FD EI ++DA+K+ TV+DA++YI+ N+
Sbjct: 2 SNIDERVLKMVAEQLGVKEEDVKPDSSFVDDLGADSLDTVELIMALEEEFDTEIPDEDAEKLATVQDAIDYINKNL 77
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: Q1N692_9GAMM (Acyl carrier protein n=1 Tax=Bermanella marisrubri TaxID=207949 RepID=Q1N692_9GAMM) HSP 1 Score: 79.7 bits (195), Expect = 7.890e-15 Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 3
Query: 219 SEVEAQVIEVVGEQLEKQ-GSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYISA 437
S++ QV+EVV EQL + VK++S+FIEDL ADSLDTVE++M+LEEKFD EI ED A+K+ TVKD VE++ +
Sbjct: 2 SDIYNQVVEVVVEQLGVEVDQVKMESHFIEDLGADSLDTVELLMALEEKFDCEIEEDKAEKLTTVKDIVEFVQS 75
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Match: A0A383EH82_9ZZZZ (Carrier domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383EH82_9ZZZZ) HSP 1 Score: 79.3 bits (194), Expect = 1.080e-14 Identity = 38/71 (53.52%), Postives = 62/71 (87.32%), Query Frame = 3
Query: 222 EVEAQVIEVVGEQLEK-QGSVKIDSNFIEDLDADSLDTVEIIMSLEEKFDIEISEDDAQKMVTVKDAVEYI 431
E+E++VI+++ EQL K + +K++SNFI+DL+ADSLDTVE++M+LEE+F+I+I +D A+++ TV+ AV+YI
Sbjct: 3 EIESKVIKIISEQLGKNEAEIKLESNFIDDLEADSLDTVELVMALEEEFEIDIPDDSAEQIATVQSAVDYI 73 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig99.18821.1 >prot_Ecto-sp6_S_contig99.18821.1 ID=prot_Ecto-sp6_S_contig99.18821.1|Name=mRNA_Ecto-sp6_S_contig99.18821.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=124bp MKVIQFVAAALVAAPSAAFFAPVGTNSFVAKQRTCARSSVAPVRMADASEback to top mRNA from alignment at Ecto-sp6_S_contig99:152715..157860- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig99.18821.1 ID=mRNA_Ecto-sp6_S_contig99.18821.1|Name=mRNA_Ecto-sp6_S_contig99.18821.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5146bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:152715..157860- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig99:152715..157860- >mRNA_Ecto-sp6_S_contig99.18821.1 ID=mRNA_Ecto-sp6_S_contig99.18821.1|Name=mRNA_Ecto-sp6_S_contig99.18821.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=372bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:152715..157860- (Ectocarpus species6 EcLAC_371)back to top |