prot_Ecto-sp6_S_contig98.18801.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18801.1
Unique Nameprot_Ecto-sp6_S_contig98.18801.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length485
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18801.1 vs. uniprot
Match: A0A6H5KXZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXZ9_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 6.890e-193
Identity = 437/485 (90.10%), Postives = 444/485 (91.55%), Query Frame = 0 
Query:    1 MAILISGRRCVHLCCVAVVLLAGQRHAALGDAVASAEAVDSSSKDVDAVGVAPEKISEACVDPTPMLEALELAKASVQGELDDCEAKRLGLDRLMKGLEATVEKQSQVLDAAGGEKGIRELTEAASSAGDATALLQQARAEAAAAREDATVXXXXXXXXXXXXXXXXXSGANAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELETLRNNLTRAEAKESKSREEHDIHAQEMRGKLERTASELELARKPRVVSMTAICADVKELGNNLVEQSKDARDDIVKRASEKVEMARVVVQPHYDSAVEASKPVVKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDESAAWIVSVLVSWGMPEQEAEKTCRYVNNLLLATAVVALVVYFGGSTVTYFIWPVLRTVLRLALWVLVLPLRILFLPVXXVLWVLLKCFRLVFGG-GAGNAAPPAAATKGATRESKKRR 484
            MAILI GRRCV LCCVAVVLLAGQRHAALGDAVASAEAVDSS KD DAVGVAPEKISEACVDPTP LEALELAKA+VQGELDDCEAKRLGLDRLMKGLEATVEKQSQVLDAAGGEKGIREL EAAS+AGDAT LLQQARAEAAAA      XXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LTRAEAKESK+REEHD HAQEMRGKLERTASELELARKPRVVSMTAICADVKELGNNLVEQSKDARDDIVKRASEK+EMARVVV PHY+SAVEASKPVVK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KSDESAAWIVSVLV WGMP+QEAEKTCRYVNNLLLA  VVALVVYFGGSTV YFIWPVLRTVLRLALWVLVLPLRIL    XXVLWVLLKCFRLVFGG GAGNAAPPAAA KGATR+SKKRR
Sbjct:    1 MAILIFGRRCVRLCCVAVVLLAGQRHAALGDAVASAEAVDSS-KDADAVGVAPEKISEACVDPTPTLEALELAKATVQGELDDCEAKRLGLDRLMKGLEATVEKQSQVLDAAGGEKGIRELREAASAAGDATTLLQQARAEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTRAEAKESKAREEHDRHAQEMRGKLERTASELELARKPRVVSMTAICADVKELGNNLVEQSKDARDDIVKRASEKLEMARVVVHPHYESAVEASKPVVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKSDESAAWIVSVLVRWGMPDQEAEKTCRYVNNLLLAMVVVALVVYFGGSTVKYFIWPVLRTVLRLALWVLVLPLRILXXXXXXVLWVLLKCFRLVFGGRGAGNAAPPAAAAKGATRQSKKRR 484
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXZ9_9PHAE6.890e-19390.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableCOILSCoilCoilcoord: 177..225
NoneNo IPR availableCOILSCoilCoilcoord: 128..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 396..419
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 428..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 420..427
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 453..484
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.585
NoneNo IPR availableTMHMMTMhelixcoord: 428..450
NoneNo IPR availableTMHMMTMhelixcoord: 396..418

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:566235..576371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18801.1mRNA_Ecto-sp6_S_contig98.18801.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 566235..578489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18801.1 ID=prot_Ecto-sp6_S_contig98.18801.1|Name=mRNA_Ecto-sp6_S_contig98.18801.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=485bp
MAILISGRRCVHLCCVAVVLLAGQRHAALGDAVASAEAVDSSSKDVDAVG
VAPEKISEACVDPTPMLEALELAKASVQGELDDCEAKRLGLDRLMKGLEA
TVEKQSQVLDAAGGEKGIRELTEAASSAGDATALLQQARAEAAAAREDAT
VARGEVEAAKQEAEAAKESGANAGSEAAAARERAAQVAAEKEALQGKLDA
ADKELETLRNNLTRAEAKESKSREEHDIHAQEMRGKLERTASELELARKP
RVVSMTAICADVKELGNNLVEQSKDARDDIVKRASEKVEMARVVVQPHYD
SAVEASKPVVKKAMEVTEPHRKKAGEVLAVYRGKFDESVGAPAAEKWSSG
KAKVSEAWQAAQTKSDESAAWIVSVLVSWGMPEQEAEKTCRYVNNLLLAT
AVVALVVYFGGSTVTYFIWPVLRTVLRLALWVLVLPLRILFLPVRLVLWV
LLKCFRLVFGGGAGNAAPPAAATKGATRESKKRR*
back to top