prot_Ecto-sp6_S_contig98.18752.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18752.1
Unique Nameprot_Ecto-sp6_S_contig98.18752.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length314
Homology
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BLAST of mRNA_Ecto-sp6_S_contig98.18752.1 vs. uniprot
Match: D7FI17_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI17_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 2.780e-170
Identity = 257/265 (96.98%), Postives = 258/265 (97.36%), Query Frame = 0 
Query:    1 MCARIAAQQRQRASAARRLRQAEDERRLESLLAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLLSDAKATAAPPLPPAAGFVMPPCTHRGAPPA-GSGRGRRRTAVEEGERRAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVVDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQR 264
            MCARIA QQRQRASAARRLRQAEDERRLE L+AGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGL SDAKATAAPPLPPAAGFVMPPCTHRGAPPA GSGRGRR TAVEEGER AAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDV DVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQR
Sbjct:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLPPAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQR 265
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BLAST of mRNA_Ecto-sp6_S_contig98.18752.1 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 1.740e-142
Identity = 231/270 (85.56%), Postives = 236/270 (87.41%), Query Frame = 0 
Query:    1 MCARIAAQQRQRASAARRLRQAEDERRLESLLAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLLSDAKATAAPPLPPAAGFVMPPCTHRGAPPAGSGRGRRRTAVEEGERRAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQ-------QGRGTDVVDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ 263
            MCARIAAQQRQRASAARRLRQAEDERRLESL+AGRTAMMIRPLDLS NNHLQQLRASVDASWSSFSTAWDARRARGSGSGST+GGG           PLPPAAGFVMPPCTHRGAPPAGSGRGR  TAVE+GER  AAEAECPECAAIAAAHVLAGAGA                 QGRGTDVVDVWAGSSLGVLNADAL R+LTFL+PRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ
Sbjct:  154 MCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSANNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTDGGG-----------PLPPAAGFVMPPCTHRGAPPAGSGRGRGHTAVEQGERTLAAEAECPECAAIAAAHVLAGAGAXXXXXXXXXXXXXXXXXQGRGTDVVDVWAGSSLGVLNADALQRALTFLEPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ 412
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BLAST of mRNA_Ecto-sp6_S_contig98.18752.1 vs. uniprot
Match: A0A835Z6K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.120e-11
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 0 
Query:  183 SSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ 263
            S L +L  D   R L  LQP DL ELAQAS+G + AAD++ +W  +W  RFG +W S+  + AA RWH H W+P   A  Q
Sbjct:   98 SFLPLLPDDLRLRCLALLQPEDLFELAQASKGCQAAADAEPLWAGLWQYRFGRVWASQPLQDAAERWHCH-WDPLRHAPLQ 177
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI17_ECTSI2.780e-17096.98F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KFP0_9PHAE1.740e-14285.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6K8_9STRA2.120e-1146.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
IPR001810F-box domainPROSITEPS50181FBOXcoord: 182..228
score: 8.703
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 173..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:172172..173187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18752.1mRNA_Ecto-sp6_S_contig98.18752.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 172172..173187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18752.1 ID=prot_Ecto-sp6_S_contig98.18752.1|Name=mRNA_Ecto-sp6_S_contig98.18752.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=314bp
MCARIAAQQRQRASAARRLRQAEDERRLESLLAGRTAMMIRPLDLSVNNH
LQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLLSDAKATAAPPLP
PAAGFVMPPCTHRGAPPAGSGRGRRRTAVEEGERRAAAEAECPECAAIAA
AHVLAGAGAATTGGRLQQQQGRGTDVVDVWAGSSLGVLNADALHRSLTFL
QPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWH
LHDWNPKSSAVTQRVHSPLRWCHLELLGRRQVLDVHAAYRVLLDVVRFVP
MASRSVCDTSEQIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf