prot_Ecto-sp6_S_contig96.18644.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig96.18644.1
Unique Nameprot_Ecto-sp6_S_contig96.18644.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.470e-156
Identity = 224/232 (96.55%), Postives = 224/232 (96.55%), Query Frame = 0
Query:    1 MPRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAEIEGGLP 232
            M RADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETK     EGRLFALQNGLDYFETSAAGAKGIDAPFHHMAT FHETYEKTIEGAE EGGLP
Sbjct:    1 MSRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETK-----EGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGEGGLP 227          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.470e-115
Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0
Query:    1 MPRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKA 175
            M RADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALP+ SAPLPGVVIANKSDLREGGINARAVV T+A
Sbjct:    1 MSRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTEA 175          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.270e-83
Identity = 123/214 (57.48%), Postives = 164/214 (76.64%), Query Frame = 0
Query:   17 QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAEIEGG 230
            +S +RSM++ H+  LMLR KVV+VGDACVGK+++VQMF  GG  YPKNY+MT GV F VKQV +P+T+C VEL+LFDC GQ +FN+ EQ    +EN ++V VV+DV NRDSF+SC +WLQGVR+     S+ +PGV++ANKSDLREGGIN+RA V  +     EGR FA +N L++FETSAA AK +DAPF+ +A++FH+ YE+T++ AE   G
Sbjct:   26 KSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRST--RQSSMIPGVLVANKSDLREGGINSRAAVSDE-----EGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEALSG 232          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.810e-82
Identity = 125/209 (59.81%), Postives = 160/209 (76.56%), Query Frame = 0
Query:   23 MQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAEIEGGL 231
            M+  H+  LMLR+KVV+VGDA VGKT++ QM  S GH+YPKNY+MT  VDF VKQ+++PE +C VELFLFDC GQGVFNKL+  A +++NA+FVCVVFDV NR+SF+SCGRWLQGVRA  PT +AP+PGV+I +K+DLREG   +RAVV+ +     EG  FA +NGL YFE SAA + G++APF HMA +FH  YE ++  AE   G+
Sbjct:    1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPT-AAPMPGVLIGSKADLREG---SRAVVDAQ-----EGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAEGLAGV 200          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 5.990e-70
Identity = 104/207 (50.24%), Postives = 151/207 (72.95%), Query Frame = 0
Query:   17 QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIE 223
            QSG+RSM+T+H+T ++LR K+++VGDACVGKT++ Q F SGG  YPKNY+MTIG +F VKQV +PET+ +VELF++DC GQ +FN+L+  + YYENA+ V VV++V+NRDS  SC +W+ GV+A +  +  PL G  + NK + R+G I++RA V+     + E +  A   G+ YFETSAA   G+DAPF ++A  F+  YE+T++
Sbjct:    2 QSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVD-----ILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ 202          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.700e-67
Identity = 118/218 (54.13%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    9 SGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAE 226
            S S A   QS VRSM++ HR+ LMLR KVVVVGDA VGK++++ MF SGG  +PK Y+MT  VDF VKQV +PE+   VEL+LFDC GQ +FN++E   A+YENA+F+C+V+DVSN  SFESCG+WLQ V  + P+    LPGV+IANK DL  GG   R VV T+     +G+ FA  N L YFETSA   +  D PF H+A  F + YE TI  A+
Sbjct:    4 SKSSAVEYQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQ-----KGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKYEDTIAHAQ 209          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA)

HSP 1 Score: 212 bits (539), Expect = 9.010e-66
Identity = 102/209 (48.80%), Postives = 150/209 (71.77%), Query Frame = 0
Query:   18 SGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAE 226
            SG+RSM + H++  +LR K+V++GD+CVGK+S++Q+F+SGG  YPKNY+MTIG DF VKQV +P+T+ VVEL++FDC GQ +FN+LE  + YYENAA V VV+D+ N+++ +S  +WL G+++A+   S  L GV++ NKSD R+G +++RA V  + +  F   L     GL YFE SAA   G+  PF H+AT F++ YE T+  A+
Sbjct:   14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEMNSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAVSNPS-DLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDL-----GLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A8J2SZ95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ95_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.540e-64
Identity = 112/215 (52.09%), Postives = 143/215 (66.51%), Query Frame = 0
Query:   12 VAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGAE 226
            V  P +S +RSM+TTHRT LMLR KVVVVGDA VGK++++ MF SGG  YPK Y+MT  VDF VKQV +P+T   VEL+LFDC G  VFN++E+ A+ Y+ A F+ VV+DV+  DSF SC +W+QGVR         LPGV++ANK DL E     R VV+ +      GR FA +NGL YFETSA      + PF H+A  F + YE+T+  AE
Sbjct:   21 VPEPMESCLRSMETTHRTILMLRCKVVVVGDATVGKSALISMFHSGGASYPKQYVMTSWVDFRVKQVDIPDTSTAVELYLFDCAGDPVFNQVEENASQYDQAGFLFVVYDVTKEDSFASCAKWIQGVRKGREDR---LPGVLVANKIDLEE-----RRVVDEQ-----RGRDFAKENGLVYFETSALQGN-YEGPFRHVAMEFAKKYEETVARAE 221          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL)

HSP 1 Score: 204 bits (519), Expect = 4.200e-63
Identity = 100/208 (48.08%), Postives = 145/208 (69.71%), Query Frame = 0
Query:   18 SGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHETYEKTIEGA 225
            SG+RSM+TTH++T +LR KV +VG+A VGKT+VVQ+ KS GH++PKNY+MT  V+   K + +P+T+ VVEL+LFDC GQ +FN+L+ G  +Y+ A+   VVFDV+N++SF+SC +W Q VR A P  +  +PGV++ANK+DLR    N R  + TK     E   FA +N + +FE SA    G++APF ++A  FH+ Y+ T + A
Sbjct:    2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTK-----EAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHKKYQATTQRA 199          
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Match: A0A7S1XUM6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUM6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.410e-62
Identity = 104/206 (50.49%), Postives = 143/206 (69.42%), Query Frame = 0
Query:   14 APSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPE--TDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATRFHET 217
            A ++SG+RSM+T+   TLMLR KVV+VGDACVGKT++  MF+S    YP+ Y MT  V+F VK V V     +   EL+LFDC GQ +FN++   +  +ENA++V +V+DV+NR+SF+SCGRWLQ +R+  P++  P+PGV++ANK DLR   +++RA V     T  EGR FA +NGL YFE SA    GI+ PFHH+A  F+ T
Sbjct:   16 AEAESGLRSMKTSFVPTLMLRCKVVIVGDACVGKTAIASMFESNLQQYPRKYNMTTTVEFTVKLVPVRAEGVNVAAELYLFDCAGQSIFNQVGTNSKNFENASYVIIVYDVANRESFQSCGRWLQQIRSTRPSSGPPIPGVLLANKIDLRSDMLSSRAEV-----TESEGRGFAAENGLAYFECSALQGAGINEPFHHIANTFYVT 216          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI1.470e-15696.55IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE1.470e-11597.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XVJ0_9STRA4.270e-8357.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZCC9_9STRA1.810e-8259.81IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S3M1Q0_9STRA5.990e-7050.24Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3JRK5_9STRA1.700e-6754.13Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0SQ35_9STRA9.010e-6648.80Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J2SZ95_9STRA5.540e-6452.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0N7L680_PLAHL4.200e-6348.08Intraflagellar transport protein 27 homolog n=1 Ta... [more]
A0A7S1XUM6_9STRA3.410e-6250.49Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 35..56
score: 38.71
coord: 60..76
score: 30.59
coord: 80..102
score: 24.32
coord: 192..214
score: 27.91
coord: 147..160
score: 34.56
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 37..218
e-value: 2.2E-6
score: -36.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 32..217
e-value: 4.4E-6
score: -22.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 35..217
e-value: 8.9E-16
score: 68.4
NoneNo IPR availableGENE3D3.40.50.300coord: 18..226
e-value: 7.6E-45
score: 154.5
NoneNo IPR availablePANTHERPTHR24070:SF414GTP-BINDING PROTEIN RAY-LIKE ISOFORM 2-RELATEDcoord: 32..223
NoneNo IPR availablePROSITEPS51419RABcoord: 24..232
score: 17.985
IPR001806Small GTPasePFAMPF00071Rascoord: 36..213
e-value: 8.6E-32
score: 110.0
IPR020849Small GTPase superfamily, Ras-typePANTHERPTHR24070FAMILY NOT NAMEDcoord: 32..223
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 35..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:439667..443462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18644.1mRNA_Ecto-sp6_S_contig96.18644.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig96 439667..443462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18644.1 ID=prot_Ecto-sp6_S_contig96.18644.1|Name=mRNA_Ecto-sp6_S_contig96.18644.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=233bp
MPRADTILSGSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSV
VQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVF
NKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLP
GVVIANKSDLREGGINARAVVETKASTLFEGRLFALQNGLDYFETSAAGA
KGIDAPFHHMATRFHETYEKTIEGAEIEGGLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras-type
IPR027417P-loop_NTPase