mRNA_Ecto-sp6_S_contig90.18338.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig90.18338.1
Unique NamemRNA_Ecto-sp6_S_contig90.18338.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 7.850e-142
Identity = 220/224 (98.21%), Postives = 223/224 (99.55%), Query Frame = 1 
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            MIKAVALAALAALFGADAFVSPVA+SFSGSAVAQRPTASRATSKAMKMS+NEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYD TGKVIRGPAPLSLALSHVEEV+GKVIFKEWKETDFRTGDKPWW
Sbjct:    1 MIKAVALAALAALFGADAFVSPVATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.960e-89
Identity = 143/221 (64.71%), Postives = 170/221 (76.92%), Query Frame = 1 
Query:   10 AVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            AV +AA+  L  +  FV+P  S+F+G+ V  +P A    S A+KMSA E+ FVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP        GV A+DA+G +VTVE W+ATH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH+E   G V+FK W ETDFRTG+ PWW
Sbjct:    7 AVCVAAVTCL--SHGFVAP--SAFTGARVLSKPVAQ--ASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 4.360e-88
Identity = 141/211 (66.82%), Postives = 164/211 (77.73%), Query Frame = 1 
Query:   49 DAFVSPVASSFSGSAVAQRPTASRATSKAM---KMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
             AFV+P  SSF+G+ V      S+A +K++    MSA E+ FVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP        GV A+DA+G +VTVE WL TH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH++   GKV+FK W ETDFRTG+ PWW
Sbjct:   18 SAFVAP--SSFAGAKVV-----SKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 265 bits (676), Expect = 9.610e-82
Identity = 124/195 (63.59%), Postives = 149/195 (76.41%), Query Frame = 1 
Query:   88 SAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            SA   R  + R  +K M  +  EE FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP        G+ AKDA+G++VTV+ WL+TH  G R L +G+KGDATYL+V EDK +++YG+ AVCTHLGCVVPWNKAE+KF+CPCHGSQYD TGKV+RGPAPLSLAL+HV+E +GKV+   W ETDFRT   PWW
Sbjct:   43 SASVARTNSGRIVTK-MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.860e-81
Identity = 131/224 (58.48%), Postives = 159/224 (70.98%), Query Frame = 1 
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            M+K++AL  LAA  GA AF               R    RA  +AM M+A+E+ FVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP        G  AKDA+GN+VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KFMCPCHGSQY+  GKV+RGPAPLSLAL+HVE  +GKV+F  W ETDFRTG+ PWW
Sbjct:   92 MLKSLALLGLAA--GAAAF---------------RAQPLRAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A6H5J703_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J703_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 8.560e-77
Identity = 127/185 (68.65%), Postives = 149/185 (80.54%), Query Frame = 1 
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQR-PTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGK 552
            M K +A AAL A  GADAFVSP  S+FSG   AQR  T++R  +K ++M AN++ FVPDM+RRTAMNLILAGS+GV+V GLAVPY++FFVP         VTAKD+ GNEVTV+SWLATH  GSR+LAEGIKGDATYL+VTEDKK+QDYGIVAVCTHLGC+VPW + ENKF+CPCH S YD TGK
Sbjct:    1 MFKIIAFAALMAPTGADAFVSPATSTFSGGITAQRISTSARPATKLVRMDANKDDFVPDMNRRTAMNLILAGSVGVSVFGLAVPYLSFFVPPSESGRGSRVTAKDSDGNEVTVKSWLATHTAGSRDLAEGIKGDATYLMVTEDKKIQDYGIVAVCTHLGCLVPWYEDENKFICPCHNSMYDSTGK 185
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 8.980e-76
Identity = 118/182 (64.84%), Postives = 138/182 (75.82%), Query Frame = 1 
Query:  142 MSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXG-VTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTED----KKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            MSA +E +VPDM RR A+NLIL    GV VLGLA+PY+A FVP        G V A+DA+G EVT E WLATH  GSREL EG+KGDATYL+V +D    K ++D GIVAVCTH+GCVVPWN AENKF+CPCH SQYD  G+V+RGPAPLSLALSHV+   GKV+ + W ETDFRTG+ PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 240 bits (613), Expect = 4.950e-73
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1 
Query:  163 FVPDMDRRTAMNLILA-GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            FVPDM+RR  MNLIL  G +  +V GLA+PY+ FF+P        G+ A    G+ +T ESWL+TH  GSREL +G+KGDATYLVV EDKK++DYGI AVCTHLGCVVPWNK+ NKFMCPCHGSQYD +GKV+RGPAPLSLAL+H+ +  G + F +W ETDFRTG  PWW
Sbjct:   20 FVPDMERRNIMNLILVFGGLVPSVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 240 bits (613), Expect = 1.210e-72
Identity = 130/218 (59.63%), Postives = 153/218 (70.18%), Query Frame = 1 
Query:   19 LAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            L A   L  A  + SP A + S SA+A   T  RAT     M+A ++ FVPDM+RR  MN +L G+  V  L LA  Y  FF P   XXXXXGVTA DA+G++VTVE WLATH  G R+L EG+KGDATYL+VT DKK++ Y + AVCTHLGCVVPWN A+ KF+CPCHGSQYD TGKV+RGPAPLSLAL+HV    GKV+   W ETDFRTG  PWW
Sbjct:    6 LLAACTLAAASGYASPRAVAPSRSALA---TTHRATPL---MAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDFRTGLAPWW 217
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BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.510e-72
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = 1 
Query:  154 EEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 672
            ++ F+PDM RR  MNL+LAG++G+NV    +PY+ FFVP           A DA+G+E+  + WL TH  G R L +G+KGDATYL+VTE+  ++ YG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD TGKV+RGPAPLSLAL+HVE  +GK++F+ W E DFRTG  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI7.850e-14298.21Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A836CBH8_9STRA1.960e-8964.71Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A835YPA4_9STRA4.360e-8866.82Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA9.610e-8263.59Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA1.860e-8158.48Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A6H5J703_9PHAE8.560e-7768.65Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZDT9_9STRA8.980e-7664.84Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A2D5MSC7_9BACT4.950e-7363.74Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A8J5X155_DIALT1.210e-7259.63Rieske domain-containing protein n=3 Tax=Diacronem... [more]
A0A7S2V1Z6_9STRA2.510e-7259.54Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:341468..347158 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score417.2
Seed ortholog evalue5e-114
Seed eggNOG ortholog2880.D7FL45
Preferred namePETC
Model size1706
KEGG rclassRC01002
KEGG koko:K02636
KEGG ReactionR03817,R08409
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066
Exons5
EggNOG free text desc.oxidoreductase activity, acting on diphenols and related substances as donors
EggNOG OGsCOG0723@1,KOG1671@2759
Ec32 ortholog descriptionCytochrome b6-f complex iron-sulfur subunit
Ec32 orthologEc-05_006690.1
EC1.10.9.1
Cds size675
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18338.1prot_Ecto-sp6_S_contig90.18338.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig90 342499..347158 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350552.660855-UTR-Ecto-sp6_S_contig90:341467..3424981682350552.660855-UTR-Ecto-sp6_S_contig90:341467..342498Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig90 341468..342498 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350552.6742973-CDS-Ecto-sp6_S_contig90:342498..3425411682350552.6742973-CDS-Ecto-sp6_S_contig90:342498..342541Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 342499..342541 -
1682350552.6850998-CDS-Ecto-sp6_S_contig90:343383..3434631682350552.6850998-CDS-Ecto-sp6_S_contig90:343383..343463Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 343384..343463 -
1682350552.6931655-CDS-Ecto-sp6_S_contig90:343928..3440871682350552.6931655-CDS-Ecto-sp6_S_contig90:343928..344087Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 343929..344087 -
1682350552.7120273-CDS-Ecto-sp6_S_contig90:344938..3452261682350552.7120273-CDS-Ecto-sp6_S_contig90:344938..345226Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 344939..345226 -
1682350552.7220578-CDS-Ecto-sp6_S_contig90:347053..3471581682350552.7220578-CDS-Ecto-sp6_S_contig90:347053..347158Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 347054..347158 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig90.18338.1

>prot_Ecto-sp6_S_contig90.18338.1 ID=prot_Ecto-sp6_S_contig90.18338.1|Name=mRNA_Ecto-sp6_S_contig90.18338.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=225bp
MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSA
NEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGGGGSGGGV
TAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGI
VAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVE
EVEGKVIFKEWKETDFRTGDKPWW*
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mRNA from alignment at Ecto-sp6_S_contig90:341468..347158-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig90.18338.1 ID=mRNA_Ecto-sp6_S_contig90.18338.1|Name=mRNA_Ecto-sp6_S_contig90.18338.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5691bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:341468..347158- (Ectocarpus species6 EcLAC_371)
ATGATCAAGGCCGTAGCACTCGCAGCCCTCGCGGCCCTCTTCGGCGCCGA
TGCATTCGTTTCGCCGGTGGCCTCTAGCTTTTCCGGCAGCGCCGTTGCTC
AGAGGGTGAGTCCGGATTTCGCCATGTGATGTATGTCAGCGCAGCAGTTG
TCATGTTGAAAAGTGAGGTGCTGACGAGGTTGTGTGTTTTTGGCAGTTTG
CACCCGTGGCGTGGCCAGTTCATGCGGCCGTAGCTGCCCGGATGCCACCG
ATCGCGCCTTGTCTTCCCCTGTGGTTGAAGTGTTAATTGGCAGAGGAGGC
CCTTTCGTGTGTGCTGGTGTGTTTCGTGGGGTTTGCGTGGAGATTTGGGC
ATGAGGGTCACCACGACCTCTGCCTCGTCTCTCCATTCTGTCGCTAATAT
GCCCTCACACATGCGCCGTGTGGTCTGGCTGGGGTGCTACACCAATACTA
GCATATGAAGAACACACACGCGCTCGACAGAGAGACCCTCCGGAAGGTGG
AAGACCTACCTACACAGCAGCAAACACCCCATCTCCCTTGTGCCTAGGCC
TGCTGTTTCCCAATCGCGATACCTGTGCAAGGCTTTTGGTCAGTAGGTGA
ACCTCGGAAGGCGGGAGACGGGTTCTCGACCAAAGCACACAGATCGATTG
ATTCACAGGAATTGAAGCCAGACACAAACCGGTCACCACCAGGCAGCAAC
ACCCCATGCCTACGCAGCTGTGTCTCTTTCGACATCATTAATGGTGCATG
TGGTTTGGAACACTTCAGTACGGTTCCTTTGGTGTTTTTTTGGAGACGTG
GCGTTGGTCTTGAAGCGGGAGCTGGGTTCTAAGTTTCGTCCCACGACCAC
CCCCGTGTTTTTTGCTTCAAATCTGGCTCACGTCAGTGCCTCCACCAAAT
GCTAATTTATGCTGTCGTGACTTGGACAATAACGAACACGTTGGTGGGAA
AGCGGGATTGAATCTTTGCGAAAACTGAAGCGAATCCTGTGCGGGACGGT
TTGCCGGCGCTTGTAGGACTAGTTTACTAGGTTTGCCCACTCAAGTGAAA
AAAAGAAGTGAAAAAAGGAAGATCAATACTTCAAATATTAATACAGACCC
TTCGTACTTTTTATGATAGCTGCTGTTGTTGATTCAATGCTCCGGATCAT
CGTAATTTTACCACTACAACGGCAGGCAGATGGGTCGTGTAATTCGAAGA
CATGCAGAAGTATTTGAGTATTTGTGGTCTGGCGCCTTTCGAAGTCGTTC
ATGATCCAACAGGAGGGCGAGAGGCGCTTTTTCATCCCACCCGCGTCTCT
TTGCCCGTGTATCGCCCTGGTGTCTCCCAAACATACGCAGCATTGCGAGA
TGCTGCTGTAGTGTACTTGATGCCCATCTGTCCCTCCCGAGGCGCGTATT
ACTGTAATACTAATTGGGCATACCAAGGTACCGTATATGACAGCAGTCGG
GTTCTCTTCCATTTACTACACGGCTTGATGTCTTGTTCGGCCCTTTTATA
GCATCTTTGGAGCTGGGGGTTGCCATGAGGAAGTTCCTACTTCGAGTATT
GACTACTTGTATTGACCATGATTTGGGGTAGGACGGGCCCATGGACTGCA
ATATGTACAGCAGTACACCTCAGGGTGGTCTCCTACCAATTTAAACCTTT
CGCTGTTGTGAACACATTTACCAGCAGGTCGCTTGCTGCTTTTCGCAGAT
TTAGCTATGCAGAAGTACTTTGTAGTTGAGGTTCACTTTTGGTCCAGTGC
AAGCCCTCGATTCGCCCACCTCCTCTACTACAGCAGTACCGAAACCCCTG
CTTTACTGTTGCTATTGGACACGACTGCGTGAACCATCAAATACGTTGGT
TCCTTGATTGTCCAGGACTAATGCTTTCATCGCCCCGCCCCGCCCCGCCC
CGCCCTTTCTCCCTTATGAAACGTCCCCGAAGCCCACCGCCTCCAGAGCT
ACCTCGAAGGCCATGAAGATGTCCGCCAACGAGGAAGTGTTCGTGCCCGA
CATGGACCGCCGCACGGCCATGAACCTCATCCTCGCGGGGTCCATCGGCG
TCAATGTTCTCGGGCTGGCAGTGCCGTACATCGCCTTCTTCGTGCCCCCC
GGCGGCGGCGGCAGCGGGGGCGGTGTGACCGCGAAGGACGCCATCGGGAA
CGAGGTTACCGTAGAGAGCTGGCTGGCGACCCACGGCGTGGGGTCCCGGG
AACTGGCCGAGGGAATCAAGGTTTGTTGAGGGGGTTGTGCCTTGGACTTG
CTGATGCGATTGGAGAACCTGTCCGTGCATGTGGTTGTACTGCTCCGTCT
CGGTGGTTGTTGGTCTCGCGCTGTTCGGGCGCATGGCGATGATGGTCGCT
TGGTAGGTTTGAATATAATTTTCCTCGGTTTTCGTTTCCCGGGTGTGGTG
ATCGCTCTCTCCGGCGAAAACAGGATTGTGAGCGAGTGTGTTGTGTCCGT
TTCAGTGCAAAGTTTGCACCTTTTGTTTGTTTATCAGGACCAAAGTGCGG
TAGTCTTCAAGATAGTGAGAAATGTGGCCGTGTGTCTGGCCACCGCGGCA
ACGCTGACGCGCGGAAAGTCAGGGATGGCGCATGACGTTTGCTCCTGCAC
GTTTGTGGGAAAAGTCAACGCCACGCTGTGTCAAAGCCGGGGTGTACTCT
ACCTTACTGAACTGCTCGTCCCTATCGTGGCCCGGCTTCCGTCTGGGAGG
AAGCCTGCAAGGCAAAATTTGGGGGTGCAGCTGTGGCGGTAGTCTCGGTA
GAGATCGAATATGTCCACTATTGTGTCAAGTTCTCAACATCTCATGTGTC
TCTGATTTTGTCGGCTGAGGCTTCCGTGTTGTTGTTGCATCTCCCTGGTA
GCCAACACCGCAACTGGTACTGGACAGGCTTCTGTGATGACTTGCTTGTG
GACCCTGCGATAATCACCCGTGTGATAACTTCGTGCGCCTTTCGTGAGGA
GGGAGAGGTGACTGCGTGTTACTCTCTGTATTATCGGTCGTCGATCGGCT
TATCAATCGATCATCATCACCAACATTCGTTTTTTTTTTTTAATCGTGTA
CGTGTGTGCTTCCTTGCACAGGGTGACGCGACTTACCTGGTGGTAACGGA
GGACAAGAAGGTTCAGGACTACGGTATCGTGGCGGTGTGCACTCACTTGG
GTTGCGTGGTGCCCTGGAACAAGGCGGAGAACAAGTTCATGTGCCCGTGC
CACGGCTCTCAGTACGATTTCACCGGAAAGGTGAGCGATCAGAACACAGC
AGTGCAATCTGTTATCGCGACAATATTTTGTACTGAGTTGCCATGAGAAT
TTCGGTCGTTGGGTGATGATGACCGAGCAACGCTAGCCGTATTTTCGCGG
TTGTGCTCACACGGTCATGGCCGCGTCTTCGCTTTCTAGCTATATTTGGG
CACGAGTCATGCTCAAGTTGCTTGCGCTTGCAGGGAGTACGAAGTGCTAA
GTGTGCTCGTACAGCTCTCGCAATTCAGGTTAAAAAAATCGCTACGACGC
ATGGGCCTTTTTTATCATGTCCACAACACGCTCGCATCGATCGTGCTTGG
GGCTCTCAAACATCATGGAGTCCTTCCCAGCATCCAAAAACGAACGTACA
CGCGCAGTAGTGCTGTTGACGTGCGCATCCGCTGACTTTCCTTGTGAAAA
CGTCGTCCTTTTTTTTCCCGCCGCAAAATCATCACGCTCTGGCAGGTTAT
CAGGGGGCCGGCACCTCTCTCCCTCGCCCTCTCGCACGTGGAGGAGGTTG
AGGGCAAGGTTATCTTCAAGGAGTGGTGAGTTTTCTTGCCGCTTCGGAGA
TCGGTGTTGTTATGTATGCACGCTTGATGTTTGTCGAGTGTCCCTCCCTA
CCTCAGTTTCTCTCTATTTTCTCGAGCACCGCAGTGTCGCAATGTGGGTT
ATTCGTTCTGTTGGCGTTCCGTGGTATCGTGCTGGGCACGAGTTCGTGTT
GATCGGTTTGAAATTCACATACCTGGTACTGATGGTTTTTTTTGTTCCAT
CTGTGCACCCAGCACACGGAACGCGAGAGCCTCACGTCTGTATGGGGGGC
GTCTTTCGTAAGCCTAGCGTCGAGTACTCGGGCAAGGATAGGATTCGCCG
GAATGTCACGGGTTTTTGAAGTCACGCGTTGGATAGGCACACCAGTCGTG
ATACCGTCGTTGTTACCCGCCGCCTTTCATGCCTGCATGAAGCAACGCGA
TGTGCCGGGTTAGACTTTCGCCGCCTTTCGATTTCTTGCAGATATCGTGA
CGTGCATGACAGTGTTAGGTTCCACCATGCTACTCTATAAACTTGTGTCC
TGAGAGCATTTAGTGTGTTCTTTGCTGCACATCTATTCTTGTGTCGCCGA
TGATGTTATTTTCTTCGCAACTTCACGGACAAATGCTACCATACGAAATA
AGTGTGGACCCTGTCGGCATCGCTTCGATGATGGGTTGCATTTGTTGTTC
TTGCCCTCTCTGCTGCTGTACCCACTCGCTGGAGATACCTTGTCATTCAT
CGTATGCATGTTTGCAACAGTTCTCGATGGTCACATCCAACATGAAACTC
TCATGCCACCGATACTCATCCATCAACCCCGGTCCCGTCCCGTGCGTTTC
CGTTTTTGCTTTTCCAGGAAGGAGACGGACTTCCGCACCGGCGACAAGCC
GTGGTGGTAGACCAGCTTTTTCTGCACAGTTGTTTTGATTCAAAAAGTAT
GATCATGCTGGCCTTCGCACGATGTTGTAGCCGTTCTCGCTTTGGACGCT
TAAGCTAACGTTGAGAGGGCCGCAGCATCCGGTAGGGTGACCACGTCATT
TGCAGCGCTGATGCCACTGAAGCACAGCAGGTAGTGGACGATTTGTGTGC
GGTACTAAAACTCGACATGGTGTCGATGAAATCAATCGATGCGTACCCAG
CGCGATGGGCCTAGGAAAACACGGCGCACCGGCCTGTCGTCGATAGTTGA
GGAGTCCGTCGCGGTCAGGAGGCGTGCTTGCTGCCAACGGCGTAGTGTCT
TGTTTGTTGGGTGCGGCTTGTTCGAAAGGTGGCTTAAATCGGGCTTGGTT
TGCCTTCAAGTACATTGCAAGCGGTTTTGGTCCCAATTTGTTGGGCGTAT
AGAGTAAAGCTTTTCTTGGGGTCTAGAAGGTGTTTTTTGGCGCTTGAGCG
CTTAGAGAGGAAGGCTTTGTATCAAGATTTTTGGCCGCAGCGGAGGTTTG
CAACACAAAATCTTCTGTGTTCGTCCGAGAATGCAAATTAGAACATCTGC
CAGTTCGAGTAGGCACAATACGGCCCAATTAAAACTCCATCCGATTTGCT
TGCGAGATGGGGCATAGGGCAGGGCCGGTTCGAAGAGATCAAATCACAAC
CATAAATTTTGTTTACACGAAGCTGCCATTTCTTGGTTTTCGGAGCCCAG
CACGACCCATGTGGTCGTTGTAGACTGTCATTGCCAATTCAGACACTCTC
ATCAGTTGGCGGTTCTCCGTAGGCAGAAAAAGTGCGCGACACAACAGAGC
ACCTATGCACGTTGTTGTGTGCGAAGGCCTTGGTATTGCCTGCCCTTCTG
TATTGTTGCGGTTGTCACACCCACCTCTTGTGGACTGAATCACTTGGTGA
GAGAGAGAAAAGAGAGAGAGAGCATGCATAGGGCGACCCTGGCGGGTTTA
CTTACATGCCGGAAAGGTTACGCAGTCTCTCAGCGAATCCC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig90:341468..347158-

>mRNA_Ecto-sp6_S_contig90.18338.1 ID=mRNA_Ecto-sp6_S_contig90.18338.1|Name=mRNA_Ecto-sp6_S_contig90.18338.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:341468..347158- (Ectocarpus species6 EcLAC_371)
ATGATCAAGGCCGTAGCACTCGCAGCCCTCGCGGCCCTCTTCGGCGCCGA
TGCATTCGTTTCGCCGGTGGCCTCTAGCTTTTCCGGCAGCGCCGTTGCTC
AGAGGCCCACCGCCTCCAGAGCTACCTCGAAGGCCATGAAGATGTCCGCC
AACGAGGAAGTGTTCGTGCCCGACATGGACCGCCGCACGGCCATGAACCT
CATCCTCGCGGGGTCCATCGGCGTCAATGTTCTCGGGCTGGCAGTGCCGT
ACATCGCCTTCTTCGTGCCCCCCGGCGGCGGCGGCAGCGGGGGCGGTGTG
ACCGCGAAGGACGCCATCGGGAACGAGGTTACCGTAGAGAGCTGGCTGGC
GACCCACGGCGTGGGGTCCCGGGAACTGGCCGAGGGAATCAAGGGTGACG
CGACTTACCTGGTGGTAACGGAGGACAAGAAGGTTCAGGACTACGGTATC
GTGGCGGTGTGCACTCACTTGGGTTGCGTGGTGCCCTGGAACAAGGCGGA
GAACAAGTTCATGTGCCCGTGCCACGGCTCTCAGTACGATTTCACCGGAA
AGGTTATCAGGGGGCCGGCACCTCTCTCCCTCGCCCTCTCGCACGTGGAG
GAGGTTGAGGGCAAGGTTATCTTCAAGGAGTGGAAGGAGACGGACTTCCG
CACCGGCGACAAGCCGTGGTGGTAG
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